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Network neighborhood for query Sequence : UBP48_MOUSE

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UBP48_MOUSE
SwissProt Accessions	Q3V0C5, Q3TM39, Q571J9, Q8VDJ1	Gene names	Usp48, Kiaa4202
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 48 (EC 3.1.2.15) (Ubiquitin thioesterase 48) (Ubiquitin-specific-processing protease 48) (Deubiquitinating enzyme 48).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

UBP48_HUMAN
θ value	0 (rank : 1)	NC score	0.997827 (rank : 2)
Query Neighborhood Hits	124	Target Neighborhood Hits	101	Shared Neighborhood Hits	91
SwissProt Accessions	Q86UV5, Q2M3I4, Q5SZI4, Q5T3T5, Q6NX53, Q8N3F6, Q96F64, Q96IQ3, Q9H5N3, Q9H5T7, Q9NUJ6, Q9NXR0	Gene names	USP48
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 48 (EC 3.1.2.15) (Ubiquitin thioesterase 48) (Ubiquitin-specific-processing protease 48) (Deubiquitinating enzyme 48).

UBP48_MOUSE
θ value	0 (rank : 2)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	124	Target Neighborhood Hits	124	Shared Neighborhood Hits	124
SwissProt Accessions	Q3V0C5, Q3TM39, Q571J9, Q8VDJ1	Gene names	Usp48, Kiaa4202
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 48 (EC 3.1.2.15) (Ubiquitin thioesterase 48) (Ubiquitin-specific-processing protease 48) (Deubiquitinating enzyme 48).

UBP7_HUMAN
θ value	1.20211e-36 (rank : 3)	NC score	0.880344 (rank : 3)
Query Neighborhood Hits	124	Target Neighborhood Hits	93	Shared Neighborhood Hits	72
SwissProt Accessions	Q93009	Gene names	USP7, HAUSP
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 7 (EC 3.1.2.15) (Ubiquitin thioesterase 7) (Ubiquitin-specific-processing protease 7) (Deubiquitinating enzyme 7) (Herpesvirus-associated ubiquitin-specific protease).

UBP34_HUMAN
θ value	8.61488e-35 (rank : 4)	NC score	0.796683 (rank : 21)
Query Neighborhood Hits	124	Target Neighborhood Hits	210	Shared Neighborhood Hits	72
SwissProt Accessions	Q70CQ2, O60316, O94834, Q3B777, Q6P6C9, Q7L8P6, Q8N3T9, Q8TBW2, Q9UGA1	Gene names	USP34, KIAA0570, KIAA0729
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 34 (EC 3.1.2.15) (Ubiquitin thioesterase 34) (Ubiquitin-specific-processing protease 34) (Deubiquitinating enzyme 34).

UBP34_MOUSE
θ value	8.61488e-35 (rank : 5)	NC score	0.797785 (rank : 20)
Query Neighborhood Hits	124	Target Neighborhood Hits	189	Shared Neighborhood Hits	74
SwissProt Accessions	Q6ZQ93, Q3UPN0, Q6P563, Q7TMJ6, Q8CCH0	Gene names	Usp34, Kiaa0570
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 34 (EC 3.1.2.15) (Ubiquitin thioesterase 34) (Ubiquitin-specific-processing protease 34) (Deubiquitinating enzyme 34).

USP9Y_HUMAN
θ value	4.72714e-33 (rank : 6)	NC score	0.779538 (rank : 32)
Query Neighborhood Hits	124	Target Neighborhood Hits	109	Shared Neighborhood Hits	73
SwissProt Accessions	O00507, O14601	Gene names	USP9Y, DFFRY, USP10
Domain Architecture
Description	Probable ubiquitin carboxyl-terminal hydrolase FAF-Y (EC 3.1.2.15) (Ubiquitin thioesterase FAF-Y) (Ubiquitin-specific-processing protease FAF-Y) (Deubiquitinating enzyme FAF-Y) (Fat facets protein-related, Y- linked) (Ubiquitin-specific protease 9, Y chromosome).

UBP24_HUMAN
θ value	1.0531e-32 (rank : 7)	NC score	0.838589 (rank : 9)
Query Neighborhood Hits	124	Target Neighborhood Hits	96	Shared Neighborhood Hits	71
SwissProt Accessions	Q9UPU5, Q6ZSY2, Q8N2Y4, Q9NXD1	Gene names	USP24, KIAA1057
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 24 (EC 3.1.2.15) (Ubiquitin thioesterase 24) (Ubiquitin-specific-processing protease 24) (Deubiquitinating enzyme 24).

UBP47_HUMAN
θ value	1.52067e-31 (rank : 8)	NC score	0.832109 (rank : 11)
Query Neighborhood Hits	124	Target Neighborhood Hits	149	Shared Neighborhood Hits	73
SwissProt Accessions	Q96K76, Q658U0, Q86Y73, Q8TEP6, Q9BWI0, Q9NWN1	Gene names	USP47
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47).

UBP47_MOUSE
θ value	5.77852e-31 (rank : 9)	NC score	0.835126 (rank : 10)
Query Neighborhood Hits	124	Target Neighborhood Hits	135	Shared Neighborhood Hits	72
SwissProt Accessions	Q8BY87, Q5EBP2, Q6KAR9, Q80V06, Q8BHU1, Q8BI15, Q8BI16, Q8BUW4, Q91X25	Gene names	Usp47
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47).

USP9X_HUMAN
θ value	9.8567e-31 (rank : 10)	NC score	0.775505 (rank : 35)
Query Neighborhood Hits	124	Target Neighborhood Hits	161	Shared Neighborhood Hits	74
SwissProt Accessions	Q93008, O75550, Q8WWT3, Q8WX12	Gene names	USP9X, DFFRX, USP9
Domain Architecture
Description	Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.1.2.15) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific-processing protease FAF-X) (Deubiquitinating enzyme FAF-X) (Fat facets protein-related, X- linked) (Ubiquitin-specific protease 9, X chromosome).

USP9X_MOUSE
θ value	3.74554e-30 (rank : 11)	NC score	0.772566 (rank : 37)
Query Neighborhood Hits	124	Target Neighborhood Hits	171	Shared Neighborhood Hits	74
SwissProt Accessions	P70398, Q62497	Gene names	Usp9x, Fafl, Fam
Domain Architecture
Description	Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.1.2.15) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific-processing protease FAF-X) (Deubiquitinating enzyme FAF-X) (Fat facets protein-related, X- linked) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin carboxyl-terminal hydrolase FAM) (Fat facets homolog).

UBP46_HUMAN
θ value	2.35151e-24 (rank : 12)	NC score	0.853670 (rank : 5)
Query Neighborhood Hits	124	Target Neighborhood Hits	81	Shared Neighborhood Hits	73
SwissProt Accessions	P62068, Q80V95, Q9H7U4, Q9H9T8	Gene names	USP46
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15) (Ubiquitin thioesterase 46) (Ubiquitin-specific-processing protease 46) (Deubiquitinating enzyme 46).

UBP46_MOUSE
θ value	2.35151e-24 (rank : 13)	NC score	0.853670 (rank : 6)
Query Neighborhood Hits	124	Target Neighborhood Hits	81	Shared Neighborhood Hits	73
SwissProt Accessions	P62069, Q80V95, Q9H7U4, Q9H9T8	Gene names	Usp46
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15) (Ubiquitin thioesterase 46) (Ubiquitin-specific-processing protease 46) (Deubiquitinating enzyme 46).

UBP8_MOUSE
θ value	4.01107e-24 (rank : 14)	NC score	0.786104 (rank : 29)
Query Neighborhood Hits	124	Target Neighborhood Hits	362	Shared Neighborhood Hits	81
SwissProt Accessions	Q80U87, Q80YP2, Q8R0D3, Q9EQU1, Q9WVP5	Gene names	Usp8, Kiaa0055, Ubpy
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.1.2.15) (Ubiquitin thioesterase 8) (Ubiquitin-specific-processing protease 8) (Deubiquitinating enzyme 8) (mUBPy).

UBP2_HUMAN
θ value	8.93572e-24 (rank : 15)	NC score	0.801047 (rank : 18)
Query Neighborhood Hits	124	Target Neighborhood Hits	84	Shared Neighborhood Hits	73
SwissProt Accessions	O75604, Q96MB9, Q9BQ21	Gene names	USP2, UBP41
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.1.2.15) (Ubiquitin thioesterase 2) (Ubiquitin-specific-processing protease 2) (Deubiquitinating enzyme 2) (41 kDa ubiquitin-specific protease).

UBP8_HUMAN
θ value	8.93572e-24 (rank : 16)	NC score	0.746846 (rank : 39)
Query Neighborhood Hits	124	Target Neighborhood Hits	751	Shared Neighborhood Hits	86
SwissProt Accessions	P40818, Q7Z3U2, Q86VA0, Q8IWI7	Gene names	USP8, KIAA0055, UBPY
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.1.2.15) (Ubiquitin thioesterase 8) (Ubiquitin-specific-processing protease 8) (Deubiquitinating enzyme 8) (hUBPy).

UBP20_HUMAN
θ value	1.5242e-23 (rank : 17)	NC score	0.802601 (rank : 16)
Query Neighborhood Hits	124	Target Neighborhood Hits	113	Shared Neighborhood Hits	74
SwissProt Accessions	Q9Y2K6, Q96LG5, Q9UQN8, Q9UQP0	Gene names	USP20, KIAA1003, LSFR3A
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 20 (EC 3.1.2.15) (Ubiquitin thioesterase 20) (Ubiquitin-specific-processing protease 20) (Deubiquitinating enzyme 20).

UBP44_HUMAN
θ value	4.43474e-23 (rank : 18)	NC score	0.786913 (rank : 28)
Query Neighborhood Hits	124	Target Neighborhood Hits	91	Shared Neighborhood Hits	74
SwissProt Accessions	Q9H0E7	Gene names	USP44
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 44 (EC 3.1.2.15) (Ubiquitin thioesterase 44) (Ubiquitin-specific-processing protease 44) (Deubiquitinating enzyme 44).

UBP40_HUMAN
θ value	5.79196e-23 (rank : 19)	NC score	0.841510 (rank : 8)
Query Neighborhood Hits	124	Target Neighborhood Hits	81	Shared Neighborhood Hits	71
SwissProt Accessions	Q9NVE5, Q6NX38, Q70EL0	Gene names	USP40
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 40 (EC 3.1.2.15) (Ubiquitin thioesterase 40) (Ubiquitin-specific-processing protease 40) (Deubiquitinating enzyme 40).

UBP12_HUMAN
θ value	1.6852e-22 (rank : 20)	NC score	0.848376 (rank : 7)
Query Neighborhood Hits	124	Target Neighborhood Hits	85	Shared Neighborhood Hits	73
SwissProt Accessions	O75317	Gene names	USP12, UBH1, USP12L1
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 12 (EC 3.1.2.15) (Ubiquitin thioesterase 12) (Ubiquitin-specific-processing protease 12) (Deubiquitinating enzyme 12) (Ubiquitin-hydrolyzing enzyme 1).

UBP18_HUMAN
θ value	2.43343e-21 (rank : 21)	NC score	0.854886 (rank : 4)
Query Neighborhood Hits	124	Target Neighborhood Hits	81	Shared Neighborhood Hits	72
SwissProt Accessions	Q9UMW8, Q9NY71	Gene names	USP18, ISG43
Domain Architecture
Description	Ubl carboxyl-terminal hydrolase 18 (EC 3.1.2.-) (Ubl thioesterase 18) (ISG15-specific-processing protease) (43 kDa ISG15-specific protease) (hUBP43).

UBPW_MOUSE
θ value	3.17815e-21 (rank : 22)	NC score	0.829608 (rank : 13)
Query Neighborhood Hits	124	Target Neighborhood Hits	89	Shared Neighborhood Hits	73
SwissProt Accessions	Q61068	Gene names	Dub1, Dub-1
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase DUB-1 (EC 3.1.2.15) (Ubiquitin thioesterase DUB-1) (Ubiquitin-specific-processing protease DUB-1) (Deubiquitinating enzyme 1).

UB17L_HUMAN
θ value	4.15078e-21 (rank : 23)	NC score	0.817731 (rank : 14)
Query Neighborhood Hits	124	Target Neighborhood Hits	83	Shared Neighborhood Hits	72
SwissProt Accessions	Q7RTZ2	Gene names	USP17L
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 17-like protein (EC 3.1.2.15) (Ubiquitin thioesterase 17-like) (Ubiquitin-specific-processing protease 17-like) (Deubiquitinating enzyme 17-like).

UBP2_MOUSE
θ value	5.42112e-21 (rank : 24)	NC score	0.799577 (rank : 19)
Query Neighborhood Hits	124	Target Neighborhood Hits	86	Shared Neighborhood Hits	73
SwissProt Accessions	O88623, Q6X4T9, Q6X4U1, Q8VD74, Q9JJ87	Gene names	Usp2, Ubp41
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.1.2.15) (Ubiquitin thioesterase 2) (Ubiquitin-specific-processing protease 2) (Deubiquitinating enzyme 2) (41 kDa ubiquitin-specific protease).

UBP36_HUMAN
θ value	2.69047e-20 (rank : 25)	NC score	0.810273 (rank : 15)
Query Neighborhood Hits	124	Target Neighborhood Hits	232	Shared Neighborhood Hits	74
SwissProt Accessions	Q9P275, Q8NDM8, Q9NVC8	Gene names	USP36, KIAA1453
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 36 (EC 3.1.2.15) (Ubiquitin thioesterase 36) (Ubiquitin-specific-processing protease 36) (Deubiquitinating enzyme 36).

UBP18_MOUSE
θ value	4.58923e-20 (rank : 26)	NC score	0.831795 (rank : 12)
Query Neighborhood Hits	124	Target Neighborhood Hits	77	Shared Neighborhood Hits	69
SwissProt Accessions	Q9WTV6	Gene names	Usp18, Ubp43
Domain Architecture
Description	Ubl carboxyl-terminal hydrolase 18 (EC 3.1.2.-) (Ubl thioesterase 18) (ISG15-specific-processing protease) (43 kDa ISG15-specific protease).

UBP33_HUMAN
θ value	4.58923e-20 (rank : 27)	NC score	0.793824 (rank : 26)
Query Neighborhood Hits	124	Target Neighborhood Hits	157	Shared Neighborhood Hits	76
SwissProt Accessions	Q8TEY7, Q8TEY6, Q96AV6, Q9H9F0, Q9UPQ5	Gene names	USP33, KIAA1097, VDU1
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.1.2.15) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33) (Deubiquitinating enzyme 33) (VHL-interacting deubiquitinating enzyme 1).

UBP3_MOUSE
θ value	1.74391e-19 (rank : 28)	NC score	0.801354 (rank : 17)
Query Neighborhood Hits	124	Target Neighborhood Hits	89	Shared Neighborhood Hits	73
SwissProt Accessions	Q91W36	Gene names	Usp3
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3).

UBP49_HUMAN
θ value	2.97466e-19 (rank : 29)	NC score	0.777151 (rank : 34)
Query Neighborhood Hits	124	Target Neighborhood Hits	100	Shared Neighborhood Hits	73
SwissProt Accessions	Q70CQ1, Q96CK4	Gene names	USP49
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 49 (EC 3.1.2.15) (Ubiquitin thioesterase 49) (Ubiquitin-specific-processing protease 49) (Deubiquitinating enzyme 49).

UBP49_MOUSE
θ value	3.88503e-19 (rank : 30)	NC score	0.777303 (rank : 33)
Query Neighborhood Hits	124	Target Neighborhood Hits	91	Shared Neighborhood Hits	73
SwissProt Accessions	Q6P9L4	Gene names	Usp49
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 49 (EC 3.1.2.15) (Ubiquitin thioesterase 49) (Ubiquitin-specific-processing protease 49) (Deubiquitinating enzyme 49).

UBP42_HUMAN
θ value	1.13037e-18 (rank : 31)	NC score	0.774616 (rank : 36)
Query Neighborhood Hits	124	Target Neighborhood Hits	445	Shared Neighborhood Hits	77
SwissProt Accessions	Q9H9J4, Q3C166, Q6P9B4	Gene names	USP42
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15) (Ubiquitin thioesterase 42) (Ubiquitin-specific-processing protease 42) (Deubiquitinating enzyme 42).

UBP25_HUMAN
θ value	1.92812e-18 (rank : 32)	NC score	0.581865 (rank : 61)
Query Neighborhood Hits	124	Target Neighborhood Hits	124	Shared Neighborhood Hits	72
SwissProt Accessions	Q9UHP3, Q9H9W1	Gene names	USP25, USP21
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 25 (EC 3.1.2.15) (Ubiquitin thioesterase 25) (Ubiquitin-specific-processing protease 25) (Deubiquitinating enzyme 25) (USP on chromosome 21).

UBP25_MOUSE
θ value	7.32683e-18 (rank : 33)	NC score	0.583221 (rank : 60)
Query Neighborhood Hits	124	Target Neighborhood Hits	116	Shared Neighborhood Hits	73
SwissProt Accessions	P57080, Q80ZT9	Gene names	Usp25
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 25 (EC 3.1.2.15) (Ubiquitin thioesterase 25) (Ubiquitin-specific-processing protease 25) (Deubiquitinating enzyme 25) (mUSP25).

UBP3_HUMAN
θ value	7.32683e-18 (rank : 34)	NC score	0.796224 (rank : 22)
Query Neighborhood Hits	124	Target Neighborhood Hits	88	Shared Neighborhood Hits	73
SwissProt Accessions	Q9Y6I4	Gene names	USP3
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3).

UBP21_MOUSE
θ value	1.058e-16 (rank : 35)	NC score	0.780714 (rank : 31)
Query Neighborhood Hits	124	Target Neighborhood Hits	101	Shared Neighborhood Hits	73
SwissProt Accessions	Q9QZL6, Q9D0R1	Gene names	Usp21, Usp23
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 21 (EC 3.1.2.15) (Ubiquitin thioesterase 21) (Ubiquitin-specific-processing protease 21) (Deubiquitinating enzyme 21).

UBP51_HUMAN
θ value	1.058e-16 (rank : 36)	NC score	0.790194 (rank : 27)
Query Neighborhood Hits	124	Target Neighborhood Hits	162	Shared Neighborhood Hits	73
SwissProt Accessions	Q70EK9, Q8IWJ8	Gene names	USP51
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 51 (EC 3.1.2.15) (Ubiquitin thioesterase 51) (Ubiquitin-specific-processing protease 51) (Deubiquitinating enzyme 51).

UBP21_HUMAN
θ value	1.80466e-16 (rank : 37)	NC score	0.780741 (rank : 30)
Query Neighborhood Hits	124	Target Neighborhood Hits	95	Shared Neighborhood Hits	73
SwissProt Accessions	Q9UK80, Q9BTV1, Q9NYN4	Gene names	USP21, USP23
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 21 (EC 3.1.2.15) (Ubiquitin thioesterase 21) (Ubiquitin-specific-processing protease 21) (Deubiquitinating enzyme 21) (NEDD8-specific protease).

UBP35_HUMAN
θ value	4.02038e-16 (rank : 38)	NC score	0.731804 (rank : 40)
Query Neighborhood Hits	124	Target Neighborhood Hits	223	Shared Neighborhood Hits	73
SwissProt Accessions	Q9P2H5	Gene names	USP35, KIAA1372, USP34
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 35 (EC 3.1.2.15) (Ubiquitin thioesterase 35) (Ubiquitin-specific-processing protease 35) (Deubiquitinating enzyme 35).

UBP50_MOUSE
θ value	1.99529e-15 (rank : 39)	NC score	0.794214 (rank : 24)
Query Neighborhood Hits	124	Target Neighborhood Hits	80	Shared Neighborhood Hits	73
SwissProt Accessions	Q6P8X6, Q9D558, Q9D9E7	Gene names	Usp50
Domain Architecture	No domain graphic available
Description	Putative ubiquitin carboxyl-terminal hydrolase 50 (EC 3.1.2.15) (Ubiquitin thioesterase 50) (Ubiquitin-specific-processing protease 50) (Deubiquitinating enzyme 50).

UBP22_HUMAN
θ value	2.60593e-15 (rank : 40)	NC score	0.794521 (rank : 23)
Query Neighborhood Hits	124	Target Neighborhood Hits	87	Shared Neighborhood Hits	73
SwissProt Accessions	Q9UPT9	Gene names	USP22, KIAA1063, USP3L
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 22 (EC 3.1.2.15) (Ubiquitin thioesterase 22) (Ubiquitin-specific-processing protease 22) (Deubiquitinating enzyme 22).

UBP22_MOUSE
θ value	2.60593e-15 (rank : 41)	NC score	0.794075 (rank : 25)
Query Neighborhood Hits	124	Target Neighborhood Hits	87	Shared Neighborhood Hits	73
SwissProt Accessions	Q5DU02, Q5SU81, Q66JV8	Gene names	Usp22, Kiaa1063
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 22 (EC 3.1.2.15) (Ubiquitin thioesterase 22) (Ubiquitin-specific-processing protease 22) (Deubiquitinating enzyme 22).

UBP28_HUMAN
θ value	2.60593e-15 (rank : 42)	NC score	0.589569 (rank : 58)
Query Neighborhood Hits	124	Target Neighborhood Hits	117	Shared Neighborhood Hits	73
SwissProt Accessions	Q96RU2, Q9P213	Gene names	USP28, KIAA1515
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.1.2.15) (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28) (Deubiquitinating enzyme 28).

UBP28_MOUSE
θ value	4.44505e-15 (rank : 43)	NC score	0.583392 (rank : 59)
Query Neighborhood Hits	124	Target Neighborhood Hits	178	Shared Neighborhood Hits	73
SwissProt Accessions	Q5I043, Q6NZP3, Q6ZPP1, Q8BWI1	Gene names	Usp28, Kiaa1515
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.1.2.15) (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28) (Deubiquitinating enzyme 28).

UBP15_MOUSE
θ value	1.68911e-14 (rank : 44)	NC score	0.692885 (rank : 43)
Query Neighborhood Hits	124	Target Neighborhood Hits	88	Shared Neighborhood Hits	73
SwissProt Accessions	Q8R5H1, Q3UL25	Gene names	Usp15
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.1.2.15) (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15) (Deubiquitinating enzyme 15).

UBP15_HUMAN
θ value	2.20605e-14 (rank : 45)	NC score	0.692549 (rank : 44)
Query Neighborhood Hits	124	Target Neighborhood Hits	92	Shared Neighborhood Hits	73
SwissProt Accessions	Q9Y4E8, Q9HCA6, Q9UNP0, Q9Y5B5	Gene names	USP15, KIAA0529
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.1.2.15) (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15) (Deubiquitinating enzyme 15) (Unph-2) (Unph4).

UBP4_HUMAN
θ value	3.18553e-13 (rank : 46)	NC score	0.683411 (rank : 49)
Query Neighborhood Hits	124	Target Neighborhood Hits	89	Shared Neighborhood Hits	73
SwissProt Accessions	Q13107, O43452, O43453	Gene names	USP4, UNP, UNPH
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15) (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear protein homolog).

UBP4_MOUSE
θ value	1.58096e-12 (rank : 47)	NC score	0.682501 (rank : 50)
Query Neighborhood Hits	124	Target Neighborhood Hits	90	Shared Neighborhood Hits	73
SwissProt Accessions	P35123, O54704	Gene names	Usp4, Unp
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15) (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear protein).

UBP43_MOUSE
θ value	6.00763e-12 (rank : 48)	NC score	0.690530 (rank : 45)
Query Neighborhood Hits	124	Target Neighborhood Hits	130	Shared Neighborhood Hits	74
SwissProt Accessions	Q8BUM9, Q8VDP5	Gene names	Usp43
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 43 (EC 3.1.2.15) (Ubiquitin thioesterase 43) (Ubiquitin-specific-processing protease 43) (Deubiquitinating enzyme 43).

UBP31_HUMAN
θ value	1.33837e-11 (rank : 49)	NC score	0.688163 (rank : 46)
Query Neighborhood Hits	124	Target Neighborhood Hits	293	Shared Neighborhood Hits	74
SwissProt Accessions	Q70CQ4, Q6AW97, Q6ZTC0, Q6ZTN2, Q9ULL7	Gene names	USP31, KIAA1203
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 31 (EC 3.1.2.15) (Ubiquitin thioesterase 31) (Ubiquitin-specific-processing protease 31) (Deubiquitinating enzyme 31).

UBP43_HUMAN
θ value	1.74796e-11 (rank : 50)	NC score	0.685486 (rank : 48)
Query Neighborhood Hits	124	Target Neighborhood Hits	144	Shared Neighborhood Hits	73
SwissProt Accessions	Q70EL4, Q8N2C5, Q96DQ6	Gene names	USP43
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 43 (EC 3.1.2.15) (Ubiquitin thioesterase 43) (Ubiquitin-specific-processing protease 43) (Deubiquitinating enzyme 43).

UBP50_HUMAN
θ value	3.89403e-11 (rank : 51)	NC score	0.760724 (rank : 38)
Query Neighborhood Hits	124	Target Neighborhood Hits	75	Shared Neighborhood Hits	68
SwissProt Accessions	Q70EL3	Gene names	USP50
Domain Architecture	No domain graphic available
Description	Inactive ubiquitin carboxyl-terminal hydrolase 50 (Inactive ubiquitin- specific peptidase 50).

UBP11_HUMAN
θ value	6.64225e-11 (rank : 52)	NC score	0.686750 (rank : 47)
Query Neighborhood Hits	124	Target Neighborhood Hits	88	Shared Neighborhood Hits	73
SwissProt Accessions	P51784, Q8IUG6, Q9BWE1	Gene names	USP11, UHX1
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 11 (EC 3.1.2.15) (Ubiquitin thioesterase 11) (Ubiquitin-specific-processing protease 11) (Deubiquitinating enzyme 11).

UBP1_HUMAN
θ value	4.30538e-10 (rank : 53)	NC score	0.708400 (rank : 42)
Query Neighborhood Hits	124	Target Neighborhood Hits	259	Shared Neighborhood Hits	74
SwissProt Accessions	O94782, Q9UFR0, Q9UNJ3	Gene names	USP1
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 1 (EC 3.1.2.15) (Ubiquitin thioesterase 1) (Ubiquitin-specific-processing protease 1) (Deubiquitinating enzyme 1) (hUBP).

UBP38_HUMAN
θ value	5.62301e-10 (rank : 54)	NC score	0.673915 (rank : 51)
Query Neighborhood Hits	124	Target Neighborhood Hits	97	Shared Neighborhood Hits	71
SwissProt Accessions	Q8NB14, Q8NDF5, Q96DK6, Q96PZ6, Q9BY55	Gene names	USP38, KIAA1891
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 38 (EC 3.1.2.15) (Ubiquitin thioesterase 38) (Ubiquitin-specific-processing protease 38) (Deubiquitinating enzyme 38) (HP43.8KD).

UBP10_HUMAN
θ value	1.63604e-09 (rank : 55)	NC score	0.643215 (rank : 55)
Query Neighborhood Hits	124	Target Neighborhood Hits	153	Shared Neighborhood Hits	70
SwissProt Accessions	Q14694, Q9BWG7, Q9NSL7	Gene names	USP10, KIAA0190
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15) (Ubiquitin thioesterase 10) (Ubiquitin-specific-processing protease 10) (Deubiquitinating enzyme 10).

UBP10_MOUSE
θ value	1.63604e-09 (rank : 56)	NC score	0.645152 (rank : 54)
Query Neighborhood Hits	124	Target Neighborhood Hits	150	Shared Neighborhood Hits	69
SwissProt Accessions	P52479, Q91VY7	Gene names	Usp10, Ode-1, Uchrp
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15) (Ubiquitin thioesterase 10) (Ubiquitin-specific-processing protease 10) (Deubiquitinating enzyme 10).

UBP38_MOUSE
θ value	8.11959e-09 (rank : 57)	NC score	0.665972 (rank : 52)
Query Neighborhood Hits	124	Target Neighborhood Hits	100	Shared Neighborhood Hits	71
SwissProt Accessions	Q8BW70, Q8BWL1, Q8BX03	Gene names	Usp38
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 38 (EC 3.1.2.15) (Ubiquitin thioesterase 38) (Ubiquitin-specific-processing protease 38) (Deubiquitinating enzyme 38).

UBP14_HUMAN
θ value	1.29631e-06 (rank : 58)	NC score	0.638492 (rank : 56)
Query Neighborhood Hits	124	Target Neighborhood Hits	89	Shared Neighborhood Hits	72
SwissProt Accessions	P54578	Gene names	USP14, TGT
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15) (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14).

UBP16_HUMAN
θ value	1.69304e-06 (rank : 59)	NC score	0.722098 (rank : 41)
Query Neighborhood Hits	124	Target Neighborhood Hits	126	Shared Neighborhood Hits	75
SwissProt Accessions	Q9Y5T5, Q8NEL3	Gene names	USP16
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.1.2.15) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16) (Deubiquitinating enzyme 16) (Ubiquitin-processing protease UBP-M).

UBP14_MOUSE
θ value	1.09739e-05 (rank : 60)	NC score	0.612226 (rank : 57)
Query Neighborhood Hits	124	Target Neighborhood Hits	87	Shared Neighborhood Hits	70
SwissProt Accessions	Q9JMA1, Q543U5, Q923F2, Q9D0L0	Gene names	Usp14
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15) (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14).

UBP30_HUMAN
θ value	3.19293e-05 (rank : 61)	NC score	0.645902 (rank : 53)
Query Neighborhood Hits	124	Target Neighborhood Hits	94	Shared Neighborhood Hits	71
SwissProt Accessions	Q70CQ3, Q8WTU7, Q96JX4, Q9BSS3	Gene names	USP30
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 30 (EC 3.1.2.15) (Ubiquitin thioesterase 30) (Ubiquitin-specific-processing protease 30) (Deubiquitinating enzyme 30).

UBP13_HUMAN
θ value	5.44631e-05 (rank : 62)	NC score	0.480188 (rank : 68)
Query Neighborhood Hits	124	Target Neighborhood Hits	99	Shared Neighborhood Hits	72
SwissProt Accessions	Q92995	Gene names	USP13, ISOT3
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 13 (EC 3.1.2.15) (Ubiquitin thioesterase 13) (Ubiquitin-specific-processing protease 13) (Deubiquitinating enzyme 13) (Isopeptidase T-3) (ISOT-3).

UBP29_HUMAN
θ value	0.00035302 (rank : 63)	NC score	0.490359 (rank : 66)
Query Neighborhood Hits	124	Target Neighborhood Hits	94	Shared Neighborhood Hits	71
SwissProt Accessions	Q9HBJ7	Gene names	USP29
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 29 (EC 3.1.2.15) (Ubiquitin thioesterase 29) (Ubiquitin-specific-processing protease 29) (Deubiquitinating enzyme 29).

UBP5_HUMAN
θ value	0.000602161 (rank : 64)	NC score	0.474780 (rank : 69)
Query Neighborhood Hits	124	Target Neighborhood Hits	109	Shared Neighborhood Hits	73
SwissProt Accessions	P45974, Q96J22	Gene names	USP5, ISOT
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15) (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5) (Deubiquitinating enzyme 5) (Isopeptidase T).

UBP5_MOUSE
θ value	0.000602161 (rank : 65)	NC score	0.474383 (rank : 70)
Query Neighborhood Hits	124	Target Neighborhood Hits	106	Shared Neighborhood Hits	74
SwissProt Accessions	P56399	Gene names	Usp5, Isot
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15) (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5) (Deubiquitinating enzyme 5) (Isopeptidase T).

UBP37_HUMAN
θ value	0.00228821 (rank : 66)	NC score	0.567420 (rank : 62)
Query Neighborhood Hits	124	Target Neighborhood Hits	208	Shared Neighborhood Hits	74
SwissProt Accessions	Q86T82, Q9HCH8	Gene names	USP37, KIAA1594
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 37 (EC 3.1.2.15) (Ubiquitin thioesterase 37) (Ubiquitin-specific-processing protease 37) (Deubiquitinating enzyme 37).

UBP32_HUMAN
θ value	0.00298849 (rank : 67)	NC score	0.548285 (rank : 63)
Query Neighborhood Hits	124	Target Neighborhood Hits	170	Shared Neighborhood Hits	73
SwissProt Accessions	Q8NFA0, Q9BX85, Q9Y591	Gene names	USP32, USP10
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 32 (EC 3.1.2.15) (Ubiquitin thioesterase 32) (Ubiquitin-specific-processing protease 32) (Deubiquitinating enzyme 32) (NY-REN-60 antigen).

UBP6_HUMAN
θ value	0.00390308 (rank : 68)	NC score	0.517281 (rank : 64)
Query Neighborhood Hits	124	Target Neighborhood Hits	188	Shared Neighborhood Hits	73
SwissProt Accessions	P35125, Q15634, Q86WP6, Q8IWT4	Gene names	USP6, TRE2
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 6 (EC 3.1.2.15) (Ubiquitin thioesterase 6) (Ubiquitin-specific-processing protease 6) (Deubiquitinating enzyme 6) (Proto-oncogene TRE-2).

UBP29_MOUSE
θ value	0.0193708 (rank : 69)	NC score	0.464360 (rank : 71)
Query Neighborhood Hits	124	Target Neighborhood Hits	95	Shared Neighborhood Hits	72
SwissProt Accessions	Q9ES63	Gene names	Usp29
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 29 (EC 3.1.2.15) (Ubiquitin thioesterase 29) (Ubiquitin-specific-processing protease 29) (Deubiquitinating enzyme 29).

CALX_HUMAN
θ value	0.21417 (rank : 70)	NC score	0.036551 (rank : 85)
Query Neighborhood Hits	124	Target Neighborhood Hits	96	Shared Neighborhood Hits	7
SwissProt Accessions	P27824	Gene names	CANX
Domain Architecture
Description	Calnexin precursor (Major histocompatibility complex class I antigen- binding protein p88) (p90) (IP90).

UCRP_MOUSE
θ value	0.21417 (rank : 71)	NC score	0.073435 (rank : 76)
Query Neighborhood Hits	124	Target Neighborhood Hits	28	Shared Neighborhood Hits	4
SwissProt Accessions	Q64339, Q8K0H3	Gene names	Isg15, G1p2, Ucrp
Domain Architecture
Description	Ubiquitin cross-reactive protein precursor (Interferon-stimulated protein 15) (IP17).

DGKH_HUMAN
θ value	0.47712 (rank : 72)	NC score	0.019220 (rank : 91)
Query Neighborhood Hits	124	Target Neighborhood Hits	255	Shared Neighborhood Hits	5
SwissProt Accessions	Q86XP1, Q5VZW0, Q6PI56, Q86XP2, Q8N3N0, Q8N7J9	Gene names	DGKH
Domain Architecture	No domain graphic available
Description	Diacylglycerol kinase eta (EC 2.7.1.107) (Diglyceride kinase eta) (DGK-eta) (DAG kinase eta).

UBP26_HUMAN
θ value	0.47712 (rank : 73)	NC score	0.445758 (rank : 72)
Query Neighborhood Hits	124	Target Neighborhood Hits	108	Shared Neighborhood Hits	70
SwissProt Accessions	Q9BXU7	Gene names	USP26
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 26 (EC 3.1.2.15) (Ubiquitin thioesterase 26) (Ubiquitin-specific-processing protease 26) (Deubiquitinating enzyme 26).

CAN3_HUMAN
θ value	0.62314 (rank : 74)	NC score	0.008229 (rank : 114)
Query Neighborhood Hits	124	Target Neighborhood Hits	96	Shared Neighborhood Hits	2
SwissProt Accessions	P20807, Q9BTU4, Q9Y5S6, Q9Y5S7	Gene names	CAPN3, CANP3, CANPL3, NCL1
Domain Architecture
Description	Calpain-3 (EC 3.4.22.-) (Calpain L3) (Calpain p94) (Calcium-activated neutral proteinase 3) (CANP 3) (Muscle-specific calcium-activated neutral protease 3) (nCL-1).

PHLB2_MOUSE
θ value	0.62314 (rank : 75)	NC score	0.015773 (rank : 98)
Query Neighborhood Hits	124	Target Neighborhood Hits	1016	Shared Neighborhood Hits	20
SwissProt Accessions	Q8K1N2, Q3TNI3, Q80Y16, Q8BKV3	Gene names	Phldb2, Ll5b
Domain Architecture	No domain graphic available
Description	Pleckstrin homology-like domain family B member 2 (Protein LL5-beta).

ZRAB2_HUMAN
θ value	0.813845 (rank : 76)	NC score	0.054260 (rank : 81)
Query Neighborhood Hits	124	Target Neighborhood Hits	120	Shared Neighborhood Hits	7
SwissProt Accessions	O95218, Q9UP63	Gene names	ZRANB2, ZIS, ZNF265
Domain Architecture
Description	Zinc finger Ran-binding domain-containing protein 2 Zinc finger protein 265 (Zinc finger, splicing).

ARS2_HUMAN
θ value	1.06291 (rank : 77)	NC score	0.033640 (rank : 87)
Query Neighborhood Hits	124	Target Neighborhood Hits	186	Shared Neighborhood Hits	15
SwissProt Accessions	Q9BXP5, O95808, Q9BWP6, Q9BXP4	Gene names	ARS2, ASR2
Domain Architecture
Description	Arsenite-resistance protein 2.

SDCG8_HUMAN
θ value	1.06291 (rank : 78)	NC score	0.009141 (rank : 110)
Query Neighborhood Hits	124	Target Neighborhood Hits	1002	Shared Neighborhood Hits	18
SwissProt Accessions	Q86SQ7, O60527, Q3ZCR6, Q8N5F2, Q9P0F1	Gene names	SDCCAG8, CCCAP
Domain Architecture	No domain graphic available
Description	Serologically defined colon cancer antigen 8 (Centrosomal colon cancer autoantigen protein) (hCCCAP) (Antigen NY-CO-8).

SIAL_HUMAN
θ value	1.06291 (rank : 79)	NC score	0.034268 (rank : 86)
Query Neighborhood Hits	124	Target Neighborhood Hits	77	Shared Neighborhood Hits	4
SwissProt Accessions	P21815	Gene names	IBSP, BNSP
Domain Architecture
Description	Bone sialoprotein-2 precursor (Bone sialoprotein II) (BSP II) (Cell- binding sialoprotein) (Integrin-binding sialoprotein).

UCRP_HUMAN
θ value	1.06291 (rank : 80)	NC score	0.055997 (rank : 80)
Query Neighborhood Hits	124	Target Neighborhood Hits	26	Shared Neighborhood Hits	4
SwissProt Accessions	P05161, Q7Z2G2, Q96GF0	Gene names	ISG15, G1P2, UCRP
Domain Architecture
Description	Interferon-induced 17 kDa protein precursor [Contains: Ubiquitin cross-reactive protein (hUCRP) (Interferon-induced 15 kDa protein)].

PAR12_HUMAN
θ value	1.38821 (rank : 81)	NC score	0.013428 (rank : 103)
Query Neighborhood Hits	124	Target Neighborhood Hits	42	Shared Neighborhood Hits	2
SwissProt Accessions	Q9H0J9, Q9H610, Q9NP36, Q9NTI3	Gene names	PARP12, ZC3HDC1
Domain Architecture
Description	Poly [ADP-ribose] polymerase 12 (EC 2.4.2.30) (PARP-12) (Zinc finger CCCH domain-containing protein 1).

RAD50_HUMAN
θ value	1.38821 (rank : 82)	NC score	0.005375 (rank : 121)
Query Neighborhood Hits	124	Target Neighborhood Hits	1317	Shared Neighborhood Hits	23
SwissProt Accessions	Q92878, O43254, Q6GMT7, Q6P5X3, Q9UP86	Gene names	RAD50
Domain Architecture	No domain graphic available
Description	DNA repair protein RAD50 (EC 3.6.-.-) (hRAD50).

SNUT2_HUMAN
θ value	1.38821 (rank : 83)	NC score	0.482722 (rank : 67)
Query Neighborhood Hits	124	Target Neighborhood Hits	79	Shared Neighborhood Hits	59
SwissProt Accessions	Q53GS9, Q6NX47, Q96RK9, Q9BV89, Q9H381, Q9P050, Q9Y310	Gene names	USP39
Domain Architecture	No domain graphic available
Description	U4/U6.U5 tri-snRNP-associated protein 2 (U4/U6.U5 tri-snRNP-associated 65 kDa protein) (65K) (Inactive ubiquitin-specific peptidase 39) (SAD1 homolog).

SNUT2_MOUSE
θ value	1.38821 (rank : 84)	NC score	0.494594 (rank : 65)
Query Neighborhood Hits	124	Target Neighborhood Hits	80	Shared Neighborhood Hits	60
SwissProt Accessions	Q3TIX9, Q3TI55, Q8BLI5, Q8BZZ5, Q9CQR1	Gene names	Usp39
Domain Architecture	No domain graphic available
Description	U4/U6.U5 tri-snRNP-associated protein 2 (Inactive ubiquitin-specific peptidase 39).

CSTN1_HUMAN
θ value	1.81305 (rank : 85)	NC score	0.006870 (rank : 118)
Query Neighborhood Hits	124	Target Neighborhood Hits	183	Shared Neighborhood Hits	3
SwissProt Accessions	O94985	Gene names	CLSTN1, CS1, KIAA0911
Domain Architecture	No domain graphic available
Description	Calsyntenin-1 precursor.

PRP40_MOUSE
θ value	1.81305 (rank : 86)	NC score	0.021281 (rank : 90)
Query Neighborhood Hits	124	Target Neighborhood Hits	447	Shared Neighborhood Hits	17
SwissProt Accessions	Q9R1C7, Q61049, Q8BQ76, Q8BRW4, Q8C2U1	Gene names	Prpf40a, Fbp11, Fnbp3
Domain Architecture
Description	Pre-mRNA-processing factor 40 homolog A (Formin-binding protein 3) (Formin-binding protein 11) (FBP-11).

RAD50_MOUSE
θ value	1.81305 (rank : 87)	NC score	0.004351 (rank : 123)
Query Neighborhood Hits	124	Target Neighborhood Hits	1366	Shared Neighborhood Hits	27
SwissProt Accessions	P70388, Q6PEB0, Q8C2T7, Q9CU59	Gene names	Rad50
Domain Architecture	No domain graphic available
Description	DNA repair protein RAD50 (EC 3.6.-.-) (mRad50).

RNF8_HUMAN
θ value	1.81305 (rank : 88)	NC score	0.007006 (rank : 117)
Query Neighborhood Hits	124	Target Neighborhood Hits	622	Shared Neighborhood Hits	8
SwissProt Accessions	O76064	Gene names	RNF8, KIAA0646
Domain Architecture
Description	Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger protein 8).

STAC3_MOUSE
θ value	1.81305 (rank : 89)	NC score	0.015584 (rank : 99)
Query Neighborhood Hits	124	Target Neighborhood Hits	232	Shared Neighborhood Hits	7
SwissProt Accessions	Q8BZ71	Gene names	Stac3
Domain Architecture	No domain graphic available
Description	SH3 and cysteine-rich domain-containing protein 3.

PHLB2_HUMAN
θ value	3.0926 (rank : 90)	NC score	0.012997 (rank : 106)
Query Neighborhood Hits	124	Target Neighborhood Hits	964	Shared Neighborhood Hits	21
SwissProt Accessions	Q86SQ0, Q59EA8, Q68CY3, Q6NT98, Q8N8U8, Q8NAB1, Q8NCU5	Gene names	PHLDB2, LL5B
Domain Architecture	No domain graphic available
Description	Pleckstrin homology-like domain family B member 2 (Protein LL5-beta).

TF3C5_HUMAN
θ value	3.0926 (rank : 91)	NC score	0.018435 (rank : 93)
Query Neighborhood Hits	124	Target Neighborhood Hits	8	Shared Neighborhood Hits	3
SwissProt Accessions	Q9Y5Q8, Q8N2U7, Q8N857, Q96GD9, Q9H4P2	Gene names	GTF3C5
Domain Architecture	No domain graphic available
Description	General transcription factor 3C polypeptide 5 (Transcription factor IIIC-epsilon subunit) (TF3C-epsilon) (TFIIIC 63 kDa subunit) (TFIIIC63).

ATRX_HUMAN
θ value	4.03905 (rank : 92)	NC score	0.013220 (rank : 104)
Query Neighborhood Hits	124	Target Neighborhood Hits	842	Shared Neighborhood Hits	25
SwissProt Accessions	P46100, P51068, Q15886, Q59FB5, Q59H31, Q5H9A2, Q5JWI4, Q7Z2J1, Q9H0Z1, Q9NTS3	Gene names	ATRX, RAD54L, XH2
Domain Architecture
Description	Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) (Znf- HX).

FBXW7_HUMAN
θ value	4.03905 (rank : 93)	NC score	0.004378 (rank : 122)
Query Neighborhood Hits	124	Target Neighborhood Hits	433	Shared Neighborhood Hits	7
SwissProt Accessions	Q969H0, Q96A16, Q96LE0, Q96RI2, Q9NUX6	Gene names	FBXW7, FBW7, FBX30, SEL10
Domain Architecture
Description	F-box/WD repeat protein 7 (F-box and WD-40 domain protein 7) (F-box protein FBX30) (hCdc4) (Archipelago homolog) (hAgo) (SEL-10).

NCOR2_HUMAN
θ value	4.03905 (rank : 94)	NC score	0.010253 (rank : 108)
Query Neighborhood Hits	124	Target Neighborhood Hits	870	Shared Neighborhood Hits	15
SwissProt Accessions	Q9Y618, O00613, O15416, Q13354, Q9Y5U0	Gene names	NCOR2, CTG26
Domain Architecture
Description	Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor- associating factor) (TRAC) (CTG repeat protein 26) (SMAP270).

NO40_MOUSE
θ value	4.03905 (rank : 95)	NC score	0.015196 (rank : 100)
Query Neighborhood Hits	124	Target Neighborhood Hits	53	Shared Neighborhood Hits	5
SwissProt Accessions	Q9ESX4	Gene names	Zcchc17, Ps1d
Domain Architecture	No domain graphic available
Description	Nucleolar protein of 40 kDa (pNO40) (Zinc finger CCHC domain- containing protein 17) (Putative S1 RNA-binding domain protein) (PS1D protein).

ALBU_HUMAN
θ value	5.27518 (rank : 96)	NC score	0.010165 (rank : 109)
Query Neighborhood Hits	124	Target Neighborhood Hits	19	Shared Neighborhood Hits	3
SwissProt Accessions	P02768, O95574, P04277, Q13140, Q68DN5, Q6UXK4, Q9P157, Q9P1I7, Q9UHS3, Q9UJZ0	Gene names	ALB
Domain Architecture
Description	Serum albumin precursor.

ANK3_HUMAN
θ value	5.27518 (rank : 97)	NC score	-0.000704 (rank : 128)
Query Neighborhood Hits	124	Target Neighborhood Hits	853	Shared Neighborhood Hits	20
SwissProt Accessions	Q12955	Gene names	ANK3
Domain Architecture
Description	Ankyrin-3 (ANK-3) (Ankyrin-G).

ARS2_MOUSE
θ value	5.27518 (rank : 98)	NC score	0.024429 (rank : 88)
Query Neighborhood Hits	124	Target Neighborhood Hits	212	Shared Neighborhood Hits	11
SwissProt Accessions	Q99MR6, Q99MR4, Q99MR5, Q99MR7	Gene names	Ars2, Asr2
Domain Architecture
Description	Arsenite-resistance protein 2.

CCD55_MOUSE
θ value	5.27518 (rank : 99)	NC score	0.018304 (rank : 95)
Query Neighborhood Hits	124	Target Neighborhood Hits	519	Shared Neighborhood Hits	19
SwissProt Accessions	Q5NCR9	Gene names	Ccdc55
Domain Architecture	No domain graphic available
Description	Coiled-coil domain-containing protein 55.

DEK_HUMAN
θ value	5.27518 (rank : 100)	NC score	0.016962 (rank : 96)
Query Neighborhood Hits	124	Target Neighborhood Hits	199	Shared Neighborhood Hits	13
SwissProt Accessions	P35659, Q5TGV4, Q5TGV5	Gene names	DEK
Domain Architecture	No domain graphic available
Description	Protein DEK.

DEK_MOUSE
θ value	5.27518 (rank : 101)	NC score	0.021413 (rank : 89)
Query Neighborhood Hits	124	Target Neighborhood Hits	280	Shared Neighborhood Hits	12
SwissProt Accessions	Q7TNV0, Q80VC5, Q8BZV6	Gene names	Dek
Domain Architecture	No domain graphic available
Description	Protein DEK.

ITSN2_HUMAN
θ value	5.27518 (rank : 102)	NC score	0.000281 (rank : 126)
Query Neighborhood Hits	124	Target Neighborhood Hits	1173	Shared Neighborhood Hits	14
SwissProt Accessions	Q9NZM3, O95062, Q15812, Q9HAK4, Q9NXE6, Q9NYG0, Q9NZM2, Q9ULG4	Gene names	ITSN2, KIAA1256, SH3D1B, SWAP
Domain Architecture
Description	Intersectin-2 (SH3 domain-containing protein 1B) (SH3P18) (SH3P18-like WASP-associated protein).

TAF3_HUMAN
θ value	5.27518 (rank : 103)	NC score	0.007847 (rank : 115)
Query Neighborhood Hits	124	Target Neighborhood Hits	568	Shared Neighborhood Hits	15
SwissProt Accessions	Q5VWG9, Q6GMS5, Q6P6B5, Q86VY6, Q9BQS9, Q9UFI8	Gene names	TAF3
Domain Architecture	No domain graphic available
Description	Transcription initiation factor TFIID subunit 3 (TBP-associated factor 3) (Transcription initiation factor TFIID 140 kDa subunit) (140 kDa TATA box-binding protein-associated factor) (TAF140) (TAFII140).

UBP26_MOUSE
θ value	5.27518 (rank : 104)	NC score	0.373467 (rank : 73)
Query Neighborhood Hits	124	Target Neighborhood Hits	107	Shared Neighborhood Hits	70
SwissProt Accessions	Q99MX1	Gene names	Usp26
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 26 (EC 3.1.2.15) (Ubiquitin thioesterase 26) (Ubiquitin-specific-processing protease 26) (Deubiquitinating enzyme 26).

ZN292_HUMAN
θ value	5.27518 (rank : 105)	NC score	0.005388 (rank : 120)
Query Neighborhood Hits	124	Target Neighborhood Hits	918	Shared Neighborhood Hits	15
SwissProt Accessions	O60281, Q9H8G3, Q9H8J4	Gene names	ZNF292, KIAA0530
Domain Architecture	No domain graphic available
Description	Zinc finger protein 292.

AKP8L_HUMAN
θ value	6.88961 (rank : 106)	NC score	0.007329 (rank : 116)
Query Neighborhood Hits	124	Target Neighborhood Hits	89	Shared Neighborhood Hits	4
SwissProt Accessions	Q9ULX6, O94792, Q96J58, Q9NRQ0, Q9UGM0	Gene names	AKAP8L, NAKAP95
Domain Architecture
Description	A-kinase anchor protein 8-like (AKAP8-like protein) (Neighbor of A- kinase-anchoring protein 95) (Neighbor of AKAP95) (Homologous to AKAP95 protein) (HA95) (Helicase A-binding protein 95) (HAP95).

GDAP1_MOUSE
θ value	6.88961 (rank : 107)	NC score	0.010677 (rank : 107)
Query Neighborhood Hits	124	Target Neighborhood Hits	64	Shared Neighborhood Hits	3
SwissProt Accessions	O88741, Q8C7Q5, Q9CTN2	Gene names	Gdap1
Domain Architecture
Description	Ganglioside-induced differentiation-associated protein 1 (GDAP1).

MINK1_MOUSE
θ value	6.88961 (rank : 108)	NC score	-0.005861 (rank : 130)
Query Neighborhood Hits	124	Target Neighborhood Hits	1451	Shared Neighborhood Hits	14
SwissProt Accessions	Q9JM52, Q921M6, Q9JM92	Gene names	Mink1, Map4k6, Mink
Domain Architecture
Description	Misshapen-like kinase 1 (EC 2.7.11.1) (Mitogen-activated protein kinase kinase kinase kinase 6) (MAPK/ERK kinase kinase kinase 6) (MEK kinase kinase 6) (MEKKK 6) (Misshapen/NIK-related kinase) (GCK family kinase MiNK).

MYT1L_MOUSE
θ value	6.88961 (rank : 109)	NC score	0.008751 (rank : 111)
Query Neighborhood Hits	124	Target Neighborhood Hits	461	Shared Neighborhood Hits	10
SwissProt Accessions	P97500, O08996, Q8C643, Q8C7L4, Q8CHB4	Gene names	Myt1l, Kiaa1106, Nzf1, Png1
Domain Architecture	No domain graphic available
Description	Myelin transcription factor 1-like protein (MyT1L protein) (Postmitotic neural gene 1 protein) (Zinc finger protein Png-1) (Neural zinc finger factor 1) (NZF-1).

PRP40_HUMAN
θ value	6.88961 (rank : 110)	NC score	0.013489 (rank : 102)
Query Neighborhood Hits	124	Target Neighborhood Hits	442	Shared Neighborhood Hits	17
SwissProt Accessions	O75400, O43856, O75404, Q8TBQ1, Q9H782, Q9NWU9, Q9P0Q2, Q9Y5A8	Gene names	PRPF40A, FLAF1, FNBP3, HYPA
Domain Architecture
Description	Pre-mRNA-processing factor 40 homolog A (Formin-binding protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein HYPA/FBP11) (Fas ligand-associated factor 1) (NY-REN-6 antigen).

PSD7_MOUSE
θ value	6.88961 (rank : 111)	NC score	0.008263 (rank : 113)
Query Neighborhood Hits	124	Target Neighborhood Hits	24	Shared Neighborhood Hits	2
SwissProt Accessions	P26516, Q3TW61, Q8C0I8	Gene names	Psmd7, Mov-34, Mov34
Domain Architecture
Description	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein).

SEC63_HUMAN
θ value	6.88961 (rank : 112)	NC score	0.013203 (rank : 105)
Query Neighborhood Hits	124	Target Neighborhood Hits	586	Shared Neighborhood Hits	28
SwissProt Accessions	Q9UGP8, O95380, Q86VS9, Q8IWL0, Q9NTE0	Gene names	SEC63, SEC63L
Domain Architecture
Description	Translocation protein SEC63 homolog.

ATRX_MOUSE
θ value	8.99809 (rank : 113)	NC score	0.015791 (rank : 97)
Query Neighborhood Hits	124	Target Neighborhood Hits	682	Shared Neighborhood Hits	24
SwissProt Accessions	Q61687	Gene names	Atrx, Hp1bp2, Xnp
Domain Architecture
Description	Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent helicase ATRX) (X-linked nuclear protein) (Heterochromatin protein 2) (HP1 alpha-interacting protein) (HP1-BP38 protein).

BAZ2B_HUMAN
θ value	8.99809 (rank : 114)	NC score	0.004222 (rank : 124)
Query Neighborhood Hits	124	Target Neighborhood Hits	803	Shared Neighborhood Hits	15
SwissProt Accessions	Q9UIF8, Q96EA1, Q96SQ8, Q9P252, Q9Y4N8	Gene names	BAZ2B, KIAA1476
Domain Architecture
Description	Bromodomain adjacent to zinc finger domain 2B (hWALp4).

BPA1_MOUSE
θ value	8.99809 (rank : 115)	NC score	-0.000946 (rank : 129)
Query Neighborhood Hits	124	Target Neighborhood Hits	1477	Shared Neighborhood Hits	20
SwissProt Accessions	Q91ZU6, Q91ZU7	Gene names	Dst, Bpag1
Domain Architecture
Description	Bullous pemphigoid antigen 1, isoforms 1/2/3/4 (BPA) (Hemidesmosomal plaque protein) (Dystonia musculorum protein) (Dystonin).

BRWD1_HUMAN
θ value	8.99809 (rank : 116)	NC score	-0.000067 (rank : 127)
Query Neighborhood Hits	124	Target Neighborhood Hits	448	Shared Neighborhood Hits	7
SwissProt Accessions	Q9NSI6, O43721, Q5R2V0, Q5R2V1, Q8TCV3, Q96QG9, Q96QH0, Q9NUK1	Gene names	BRWD1, C21orf107, WDR9
Domain Architecture
Description	Bromodomain and WD repeat domain-containing protein 1 (WD repeat protein 9).

FA44A_HUMAN
θ value	8.99809 (rank : 117)	NC score	0.018940 (rank : 92)
Query Neighborhood Hits	124	Target Neighborhood Hits	280	Shared Neighborhood Hits	15
SwissProt Accessions	Q8NFC6, Q6P0M8	Gene names	FAM44A
Domain Architecture	No domain graphic available
Description	Protein FAM44A.

HDGF_MOUSE
θ value	8.99809 (rank : 118)	NC score	0.008585 (rank : 112)
Query Neighborhood Hits	124	Target Neighborhood Hits	102	Shared Neighborhood Hits	7
SwissProt Accessions	P51859, Q8BPG7, Q9CYA4, Q9JK87	Gene names	Hdgf, Tdrm1
Domain Architecture
Description	Hepatoma-derived growth factor (HDGF).

KPCT_MOUSE
θ value	8.99809 (rank : 119)	NC score	-0.006034 (rank : 132)
Query Neighborhood Hits	124	Target Neighborhood Hits	895	Shared Neighborhood Hits	6
SwissProt Accessions	Q02111	Gene names	Prkcq, Pkcq
Domain Architecture
Description	Protein kinase C theta type (EC 2.7.11.13) (nPKC-theta).

MKNK2_MOUSE
θ value	8.99809 (rank : 120)	NC score	-0.005909 (rank : 131)
Query Neighborhood Hits	124	Target Neighborhood Hits	819	Shared Neighborhood Hits	4
SwissProt Accessions	Q8CDB0, O08606, Q75PY0, Q9D893	Gene names	Mknk2, Mnk2
Domain Architecture
Description	MAP kinase-interacting serine/threonine-protein kinase 2 (EC 2.7.11.1) (MAP kinase signal-integrating kinase 2) (Mnk2).

NCOR2_MOUSE
θ value	8.99809 (rank : 121)	NC score	0.018369 (rank : 94)
Query Neighborhood Hits	124	Target Neighborhood Hits	790	Shared Neighborhood Hits	17
SwissProt Accessions	Q9WU42, Q9WU43, Q9WUC1	Gene names	Ncor2, Smrt
Domain Architecture
Description	Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor- associating factor) (TRAC).

NOLC1_HUMAN
θ value	8.99809 (rank : 122)	NC score	0.006166 (rank : 119)
Query Neighborhood Hits	124	Target Neighborhood Hits	452	Shared Neighborhood Hits	9
SwissProt Accessions	Q14978, Q15030	Gene names	NOLC1, KIAA0035
Domain Architecture
Description	Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein) (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar and coiled-body phosphoprotein 1).

TF3C5_MOUSE
θ value	8.99809 (rank : 123)	NC score	0.014334 (rank : 101)
Query Neighborhood Hits	124	Target Neighborhood Hits	12	Shared Neighborhood Hits	3
SwissProt Accessions	Q8R2T8, Q8BLE3, Q8R0D0	Gene names	Gtf3c5
Domain Architecture	No domain graphic available
Description	General transcription factor 3C polypeptide 5 (Transcription factor IIIC-epsilon subunit) (TF3C-epsilon) (TFIIIC 63 kDa subunit) (TFIIIC63).

TICN3_MOUSE
θ value	8.99809 (rank : 124)	NC score	0.003213 (rank : 125)
Query Neighborhood Hits	124	Target Neighborhood Hits	83	Shared Neighborhood Hits	2
SwissProt Accessions	Q8BKV0, Q9ER59	Gene names	Spock3
Domain Architecture	No domain graphic available
Description	Testican-3 precursor (SPARC/osteonectin, CWCV, and Kazal-like domains proteoglycan 3).

BRAP_HUMAN
θ value	θ > 10 (rank : 125)	NC score	0.084778 (rank : 75)
Query Neighborhood Hits	124	Target Neighborhood Hits	560	Shared Neighborhood Hits	24
SwissProt Accessions	Q7Z569, O43238, O75341	Gene names	BRAP, RNF52
Domain Architecture	No domain graphic available
Description	BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes mitogenic signal propagation) (IMP) (RING finger protein 52) (NY-REN-63 antigen).

BRAP_MOUSE
θ value	θ > 10 (rank : 126)	NC score	0.095952 (rank : 74)
Query Neighborhood Hits	124	Target Neighborhood Hits	409	Shared Neighborhood Hits	19
SwissProt Accessions	Q99MP8, Q8CC00, Q8CHX1, Q99MP7, Q9CXX8	Gene names	Brap
Domain Architecture	No domain graphic available
Description	BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes mitogenic signal propagation) (IMP).

GGNB1_HUMAN
θ value	θ > 10 (rank : 127)	NC score	0.052532 (rank : 82)
Query Neighborhood Hits	124	Target Neighborhood Hits	10	Shared Neighborhood Hits	5
SwissProt Accessions	Q5YKI7, Q5YKI8	Gene names	GGNBP1
Domain Architecture	No domain graphic available
Description	Gametogenetin-binding protein 1.

GGNB1_MOUSE
θ value	θ > 10 (rank : 128)	NC score	0.067661 (rank : 77)
Query Neighborhood Hits	124	Target Neighborhood Hits	23	Shared Neighborhood Hits	5
SwissProt Accessions	Q6K1E7, Q8C5T9	Gene names	Ggnbp1
Domain Architecture	No domain graphic available
Description	Gametogenetin-binding protein 1.

HDAC6_HUMAN
θ value	θ > 10 (rank : 129)	NC score	0.063102 (rank : 79)
Query Neighborhood Hits	124	Target Neighborhood Hits	145	Shared Neighborhood Hits	16
SwissProt Accessions	Q9UBN7	Gene names	HDAC6
Domain Architecture
Description	Histone deacetylase 6 (HD6).

HDAC6_MOUSE
θ value	θ > 10 (rank : 130)	NC score	0.065237 (rank : 78)
Query Neighborhood Hits	124	Target Neighborhood Hits	88	Shared Neighborhood Hits	12
SwissProt Accessions	Q9Z2V5	Gene names	Hdac6
Domain Architecture
Description	Histone deacetylase 6 (HD6) (Histone deacetylase mHDA2).

UBP54_HUMAN
θ value	θ > 10 (rank : 131)	NC score	0.052200 (rank : 84)
Query Neighborhood Hits	124	Target Neighborhood Hits	21	Shared Neighborhood Hits	14
SwissProt Accessions	Q70EL1, Q5F2F4	Gene names	USP54, C10orf29
Domain Architecture	No domain graphic available
Description	Inactive ubiquitin carboxyl-terminal hydrolase 54 (Inactive ubiquitin- specific peptidase 54).

UBP54_MOUSE
θ value	θ > 10 (rank : 132)	NC score	0.052354 (rank : 83)
Query Neighborhood Hits	124	Target Neighborhood Hits	19	Shared Neighborhood Hits	13
SwissProt Accessions	Q8BL06, Q8BZ28	Gene names	Usp54
Domain Architecture	No domain graphic available
Description	Inactive ubiquitin carboxyl-terminal hydrolase 54 (Inactive ubiquitin- specific peptidase 54).

Hits sorted by NC score

UBP48_MOUSE
NC score	0.999962 (rank : 1)	θ value	0 (rank : 2)
Query Neighborhood Hits	124	Target Neighborhood Hits	124	Shared Neighborhood Hits	124
SwissProt Accessions	Q3V0C5, Q3TM39, Q571J9, Q8VDJ1	Gene names	Usp48, Kiaa4202
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 48 (EC 3.1.2.15) (Ubiquitin thioesterase 48) (Ubiquitin-specific-processing protease 48) (Deubiquitinating enzyme 48).

UBP48_HUMAN
NC score	0.997827 (rank : 2)	θ value	0 (rank : 1)
Query Neighborhood Hits	124	Target Neighborhood Hits	101	Shared Neighborhood Hits	91
SwissProt Accessions	Q86UV5, Q2M3I4, Q5SZI4, Q5T3T5, Q6NX53, Q8N3F6, Q96F64, Q96IQ3, Q9H5N3, Q9H5T7, Q9NUJ6, Q9NXR0	Gene names	USP48
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 48 (EC 3.1.2.15) (Ubiquitin thioesterase 48) (Ubiquitin-specific-processing protease 48) (Deubiquitinating enzyme 48).

UBP7_HUMAN
NC score	0.880344 (rank : 3)	θ value	1.20211e-36 (rank : 3)
Query Neighborhood Hits	124	Target Neighborhood Hits	93	Shared Neighborhood Hits	72
SwissProt Accessions	Q93009	Gene names	USP7, HAUSP
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 7 (EC 3.1.2.15) (Ubiquitin thioesterase 7) (Ubiquitin-specific-processing protease 7) (Deubiquitinating enzyme 7) (Herpesvirus-associated ubiquitin-specific protease).

UBP18_HUMAN
NC score	0.854886 (rank : 4)	θ value	2.43343e-21 (rank : 21)
Query Neighborhood Hits	124	Target Neighborhood Hits	81	Shared Neighborhood Hits	72
SwissProt Accessions	Q9UMW8, Q9NY71	Gene names	USP18, ISG43
Domain Architecture
Description	Ubl carboxyl-terminal hydrolase 18 (EC 3.1.2.-) (Ubl thioesterase 18) (ISG15-specific-processing protease) (43 kDa ISG15-specific protease) (hUBP43).

UBP46_HUMAN
NC score	0.853670 (rank : 5)	θ value	2.35151e-24 (rank : 12)
Query Neighborhood Hits	124	Target Neighborhood Hits	81	Shared Neighborhood Hits	73
SwissProt Accessions	P62068, Q80V95, Q9H7U4, Q9H9T8	Gene names	USP46
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15) (Ubiquitin thioesterase 46) (Ubiquitin-specific-processing protease 46) (Deubiquitinating enzyme 46).

UBP46_MOUSE
NC score	0.853670 (rank : 6)	θ value	2.35151e-24 (rank : 13)
Query Neighborhood Hits	124	Target Neighborhood Hits	81	Shared Neighborhood Hits	73
SwissProt Accessions	P62069, Q80V95, Q9H7U4, Q9H9T8	Gene names	Usp46
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15) (Ubiquitin thioesterase 46) (Ubiquitin-specific-processing protease 46) (Deubiquitinating enzyme 46).

UBP12_HUMAN
NC score	0.848376 (rank : 7)	θ value	1.6852e-22 (rank : 20)
Query Neighborhood Hits	124	Target Neighborhood Hits	85	Shared Neighborhood Hits	73
SwissProt Accessions	O75317	Gene names	USP12, UBH1, USP12L1
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 12 (EC 3.1.2.15) (Ubiquitin thioesterase 12) (Ubiquitin-specific-processing protease 12) (Deubiquitinating enzyme 12) (Ubiquitin-hydrolyzing enzyme 1).

UBP40_HUMAN
NC score	0.841510 (rank : 8)	θ value	5.79196e-23 (rank : 19)
Query Neighborhood Hits	124	Target Neighborhood Hits	81	Shared Neighborhood Hits	71
SwissProt Accessions	Q9NVE5, Q6NX38, Q70EL0	Gene names	USP40
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 40 (EC 3.1.2.15) (Ubiquitin thioesterase 40) (Ubiquitin-specific-processing protease 40) (Deubiquitinating enzyme 40).

UBP24_HUMAN
NC score	0.838589 (rank : 9)	θ value	1.0531e-32 (rank : 7)
Query Neighborhood Hits	124	Target Neighborhood Hits	96	Shared Neighborhood Hits	71
SwissProt Accessions	Q9UPU5, Q6ZSY2, Q8N2Y4, Q9NXD1	Gene names	USP24, KIAA1057
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 24 (EC 3.1.2.15) (Ubiquitin thioesterase 24) (Ubiquitin-specific-processing protease 24) (Deubiquitinating enzyme 24).

UBP47_MOUSE
NC score	0.835126 (rank : 10)	θ value	5.77852e-31 (rank : 9)
Query Neighborhood Hits	124	Target Neighborhood Hits	135	Shared Neighborhood Hits	72
SwissProt Accessions	Q8BY87, Q5EBP2, Q6KAR9, Q80V06, Q8BHU1, Q8BI15, Q8BI16, Q8BUW4, Q91X25	Gene names	Usp47
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47).

UBP47_HUMAN
NC score	0.832109 (rank : 11)	θ value	1.52067e-31 (rank : 8)
Query Neighborhood Hits	124	Target Neighborhood Hits	149	Shared Neighborhood Hits	73
SwissProt Accessions	Q96K76, Q658U0, Q86Y73, Q8TEP6, Q9BWI0, Q9NWN1	Gene names	USP47
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47).

UBP18_MOUSE
NC score	0.831795 (rank : 12)	θ value	4.58923e-20 (rank : 26)
Query Neighborhood Hits	124	Target Neighborhood Hits	77	Shared Neighborhood Hits	69
SwissProt Accessions	Q9WTV6	Gene names	Usp18, Ubp43
Domain Architecture
Description	Ubl carboxyl-terminal hydrolase 18 (EC 3.1.2.-) (Ubl thioesterase 18) (ISG15-specific-processing protease) (43 kDa ISG15-specific protease).

UBPW_MOUSE
NC score	0.829608 (rank : 13)	θ value	3.17815e-21 (rank : 22)
Query Neighborhood Hits	124	Target Neighborhood Hits	89	Shared Neighborhood Hits	73
SwissProt Accessions	Q61068	Gene names	Dub1, Dub-1
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase DUB-1 (EC 3.1.2.15) (Ubiquitin thioesterase DUB-1) (Ubiquitin-specific-processing protease DUB-1) (Deubiquitinating enzyme 1).

UB17L_HUMAN
NC score	0.817731 (rank : 14)	θ value	4.15078e-21 (rank : 23)
Query Neighborhood Hits	124	Target Neighborhood Hits	83	Shared Neighborhood Hits	72
SwissProt Accessions	Q7RTZ2	Gene names	USP17L
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 17-like protein (EC 3.1.2.15) (Ubiquitin thioesterase 17-like) (Ubiquitin-specific-processing protease 17-like) (Deubiquitinating enzyme 17-like).

UBP36_HUMAN
NC score	0.810273 (rank : 15)	θ value	2.69047e-20 (rank : 25)
Query Neighborhood Hits	124	Target Neighborhood Hits	232	Shared Neighborhood Hits	74
SwissProt Accessions	Q9P275, Q8NDM8, Q9NVC8	Gene names	USP36, KIAA1453
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 36 (EC 3.1.2.15) (Ubiquitin thioesterase 36) (Ubiquitin-specific-processing protease 36) (Deubiquitinating enzyme 36).

UBP20_HUMAN
NC score	0.802601 (rank : 16)	θ value	1.5242e-23 (rank : 17)
Query Neighborhood Hits	124	Target Neighborhood Hits	113	Shared Neighborhood Hits	74
SwissProt Accessions	Q9Y2K6, Q96LG5, Q9UQN8, Q9UQP0	Gene names	USP20, KIAA1003, LSFR3A
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 20 (EC 3.1.2.15) (Ubiquitin thioesterase 20) (Ubiquitin-specific-processing protease 20) (Deubiquitinating enzyme 20).

UBP3_MOUSE
NC score	0.801354 (rank : 17)	θ value	1.74391e-19 (rank : 28)
Query Neighborhood Hits	124	Target Neighborhood Hits	89	Shared Neighborhood Hits	73
SwissProt Accessions	Q91W36	Gene names	Usp3
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3).

UBP2_HUMAN
NC score	0.801047 (rank : 18)	θ value	8.93572e-24 (rank : 15)
Query Neighborhood Hits	124	Target Neighborhood Hits	84	Shared Neighborhood Hits	73
SwissProt Accessions	O75604, Q96MB9, Q9BQ21	Gene names	USP2, UBP41
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.1.2.15) (Ubiquitin thioesterase 2) (Ubiquitin-specific-processing protease 2) (Deubiquitinating enzyme 2) (41 kDa ubiquitin-specific protease).

UBP2_MOUSE
NC score	0.799577 (rank : 19)	θ value	5.42112e-21 (rank : 24)
Query Neighborhood Hits	124	Target Neighborhood Hits	86	Shared Neighborhood Hits	73
SwissProt Accessions	O88623, Q6X4T9, Q6X4U1, Q8VD74, Q9JJ87	Gene names	Usp2, Ubp41
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.1.2.15) (Ubiquitin thioesterase 2) (Ubiquitin-specific-processing protease 2) (Deubiquitinating enzyme 2) (41 kDa ubiquitin-specific protease).

UBP34_MOUSE
NC score	0.797785 (rank : 20)	θ value	8.61488e-35 (rank : 5)
Query Neighborhood Hits	124	Target Neighborhood Hits	189	Shared Neighborhood Hits	74
SwissProt Accessions	Q6ZQ93, Q3UPN0, Q6P563, Q7TMJ6, Q8CCH0	Gene names	Usp34, Kiaa0570
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 34 (EC 3.1.2.15) (Ubiquitin thioesterase 34) (Ubiquitin-specific-processing protease 34) (Deubiquitinating enzyme 34).

UBP34_HUMAN
NC score	0.796683 (rank : 21)	θ value	8.61488e-35 (rank : 4)
Query Neighborhood Hits	124	Target Neighborhood Hits	210	Shared Neighborhood Hits	72
SwissProt Accessions	Q70CQ2, O60316, O94834, Q3B777, Q6P6C9, Q7L8P6, Q8N3T9, Q8TBW2, Q9UGA1	Gene names	USP34, KIAA0570, KIAA0729
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 34 (EC 3.1.2.15) (Ubiquitin thioesterase 34) (Ubiquitin-specific-processing protease 34) (Deubiquitinating enzyme 34).

UBP3_HUMAN
NC score	0.796224 (rank : 22)	θ value	7.32683e-18 (rank : 34)
Query Neighborhood Hits	124	Target Neighborhood Hits	88	Shared Neighborhood Hits	73
SwissProt Accessions	Q9Y6I4	Gene names	USP3
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3).

UBP22_HUMAN
NC score	0.794521 (rank : 23)	θ value	2.60593e-15 (rank : 40)
Query Neighborhood Hits	124	Target Neighborhood Hits	87	Shared Neighborhood Hits	73
SwissProt Accessions	Q9UPT9	Gene names	USP22, KIAA1063, USP3L
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 22 (EC 3.1.2.15) (Ubiquitin thioesterase 22) (Ubiquitin-specific-processing protease 22) (Deubiquitinating enzyme 22).

UBP50_MOUSE
NC score	0.794214 (rank : 24)	θ value	1.99529e-15 (rank : 39)
Query Neighborhood Hits	124	Target Neighborhood Hits	80	Shared Neighborhood Hits	73
SwissProt Accessions	Q6P8X6, Q9D558, Q9D9E7	Gene names	Usp50
Domain Architecture	No domain graphic available
Description	Putative ubiquitin carboxyl-terminal hydrolase 50 (EC 3.1.2.15) (Ubiquitin thioesterase 50) (Ubiquitin-specific-processing protease 50) (Deubiquitinating enzyme 50).

UBP22_MOUSE
NC score	0.794075 (rank : 25)	θ value	2.60593e-15 (rank : 41)
Query Neighborhood Hits	124	Target Neighborhood Hits	87	Shared Neighborhood Hits	73
SwissProt Accessions	Q5DU02, Q5SU81, Q66JV8	Gene names	Usp22, Kiaa1063
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 22 (EC 3.1.2.15) (Ubiquitin thioesterase 22) (Ubiquitin-specific-processing protease 22) (Deubiquitinating enzyme 22).

UBP33_HUMAN
NC score	0.793824 (rank : 26)	θ value	4.58923e-20 (rank : 27)
Query Neighborhood Hits	124	Target Neighborhood Hits	157	Shared Neighborhood Hits	76
SwissProt Accessions	Q8TEY7, Q8TEY6, Q96AV6, Q9H9F0, Q9UPQ5	Gene names	USP33, KIAA1097, VDU1
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.1.2.15) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33) (Deubiquitinating enzyme 33) (VHL-interacting deubiquitinating enzyme 1).

UBP51_HUMAN
NC score	0.790194 (rank : 27)	θ value	1.058e-16 (rank : 36)
Query Neighborhood Hits	124	Target Neighborhood Hits	162	Shared Neighborhood Hits	73
SwissProt Accessions	Q70EK9, Q8IWJ8	Gene names	USP51
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 51 (EC 3.1.2.15) (Ubiquitin thioesterase 51) (Ubiquitin-specific-processing protease 51) (Deubiquitinating enzyme 51).

UBP44_HUMAN
NC score	0.786913 (rank : 28)	θ value	4.43474e-23 (rank : 18)
Query Neighborhood Hits	124	Target Neighborhood Hits	91	Shared Neighborhood Hits	74
SwissProt Accessions	Q9H0E7	Gene names	USP44
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 44 (EC 3.1.2.15) (Ubiquitin thioesterase 44) (Ubiquitin-specific-processing protease 44) (Deubiquitinating enzyme 44).

UBP8_MOUSE
NC score	0.786104 (rank : 29)	θ value	4.01107e-24 (rank : 14)
Query Neighborhood Hits	124	Target Neighborhood Hits	362	Shared Neighborhood Hits	81
SwissProt Accessions	Q80U87, Q80YP2, Q8R0D3, Q9EQU1, Q9WVP5	Gene names	Usp8, Kiaa0055, Ubpy
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.1.2.15) (Ubiquitin thioesterase 8) (Ubiquitin-specific-processing protease 8) (Deubiquitinating enzyme 8) (mUBPy).

UBP21_HUMAN
NC score	0.780741 (rank : 30)	θ value	1.80466e-16 (rank : 37)
Query Neighborhood Hits	124	Target Neighborhood Hits	95	Shared Neighborhood Hits	73
SwissProt Accessions	Q9UK80, Q9BTV1, Q9NYN4	Gene names	USP21, USP23
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 21 (EC 3.1.2.15) (Ubiquitin thioesterase 21) (Ubiquitin-specific-processing protease 21) (Deubiquitinating enzyme 21) (NEDD8-specific protease).

UBP21_MOUSE
NC score	0.780714 (rank : 31)	θ value	1.058e-16 (rank : 35)
Query Neighborhood Hits	124	Target Neighborhood Hits	101	Shared Neighborhood Hits	73
SwissProt Accessions	Q9QZL6, Q9D0R1	Gene names	Usp21, Usp23
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 21 (EC 3.1.2.15) (Ubiquitin thioesterase 21) (Ubiquitin-specific-processing protease 21) (Deubiquitinating enzyme 21).

USP9Y_HUMAN
NC score	0.779538 (rank : 32)	θ value	4.72714e-33 (rank : 6)
Query Neighborhood Hits	124	Target Neighborhood Hits	109	Shared Neighborhood Hits	73
SwissProt Accessions	O00507, O14601	Gene names	USP9Y, DFFRY, USP10
Domain Architecture
Description	Probable ubiquitin carboxyl-terminal hydrolase FAF-Y (EC 3.1.2.15) (Ubiquitin thioesterase FAF-Y) (Ubiquitin-specific-processing protease FAF-Y) (Deubiquitinating enzyme FAF-Y) (Fat facets protein-related, Y- linked) (Ubiquitin-specific protease 9, Y chromosome).

UBP49_MOUSE
NC score	0.777303 (rank : 33)	θ value	3.88503e-19 (rank : 30)
Query Neighborhood Hits	124	Target Neighborhood Hits	91	Shared Neighborhood Hits	73
SwissProt Accessions	Q6P9L4	Gene names	Usp49
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 49 (EC 3.1.2.15) (Ubiquitin thioesterase 49) (Ubiquitin-specific-processing protease 49) (Deubiquitinating enzyme 49).

UBP49_HUMAN
NC score	0.777151 (rank : 34)	θ value	2.97466e-19 (rank : 29)
Query Neighborhood Hits	124	Target Neighborhood Hits	100	Shared Neighborhood Hits	73
SwissProt Accessions	Q70CQ1, Q96CK4	Gene names	USP49
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 49 (EC 3.1.2.15) (Ubiquitin thioesterase 49) (Ubiquitin-specific-processing protease 49) (Deubiquitinating enzyme 49).

USP9X_HUMAN
NC score	0.775505 (rank : 35)	θ value	9.8567e-31 (rank : 10)
Query Neighborhood Hits	124	Target Neighborhood Hits	161	Shared Neighborhood Hits	74
SwissProt Accessions	Q93008, O75550, Q8WWT3, Q8WX12	Gene names	USP9X, DFFRX, USP9
Domain Architecture
Description	Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.1.2.15) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific-processing protease FAF-X) (Deubiquitinating enzyme FAF-X) (Fat facets protein-related, X- linked) (Ubiquitin-specific protease 9, X chromosome).

UBP42_HUMAN
NC score	0.774616 (rank : 36)	θ value	1.13037e-18 (rank : 31)
Query Neighborhood Hits	124	Target Neighborhood Hits	445	Shared Neighborhood Hits	77
SwissProt Accessions	Q9H9J4, Q3C166, Q6P9B4	Gene names	USP42
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15) (Ubiquitin thioesterase 42) (Ubiquitin-specific-processing protease 42) (Deubiquitinating enzyme 42).

USP9X_MOUSE
NC score	0.772566 (rank : 37)	θ value	3.74554e-30 (rank : 11)
Query Neighborhood Hits	124	Target Neighborhood Hits	171	Shared Neighborhood Hits	74
SwissProt Accessions	P70398, Q62497	Gene names	Usp9x, Fafl, Fam
Domain Architecture
Description	Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.1.2.15) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific-processing protease FAF-X) (Deubiquitinating enzyme FAF-X) (Fat facets protein-related, X- linked) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin carboxyl-terminal hydrolase FAM) (Fat facets homolog).

UBP50_HUMAN
NC score	0.760724 (rank : 38)	θ value	3.89403e-11 (rank : 51)
Query Neighborhood Hits	124	Target Neighborhood Hits	75	Shared Neighborhood Hits	68
SwissProt Accessions	Q70EL3	Gene names	USP50
Domain Architecture	No domain graphic available
Description	Inactive ubiquitin carboxyl-terminal hydrolase 50 (Inactive ubiquitin- specific peptidase 50).

UBP8_HUMAN
NC score	0.746846 (rank : 39)	θ value	8.93572e-24 (rank : 16)
Query Neighborhood Hits	124	Target Neighborhood Hits	751	Shared Neighborhood Hits	86
SwissProt Accessions	P40818, Q7Z3U2, Q86VA0, Q8IWI7	Gene names	USP8, KIAA0055, UBPY
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.1.2.15) (Ubiquitin thioesterase 8) (Ubiquitin-specific-processing protease 8) (Deubiquitinating enzyme 8) (hUBPy).

UBP35_HUMAN
NC score	0.731804 (rank : 40)	θ value	4.02038e-16 (rank : 38)
Query Neighborhood Hits	124	Target Neighborhood Hits	223	Shared Neighborhood Hits	73
SwissProt Accessions	Q9P2H5	Gene names	USP35, KIAA1372, USP34
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 35 (EC 3.1.2.15) (Ubiquitin thioesterase 35) (Ubiquitin-specific-processing protease 35) (Deubiquitinating enzyme 35).

UBP16_HUMAN
NC score	0.722098 (rank : 41)	θ value	1.69304e-06 (rank : 59)
Query Neighborhood Hits	124	Target Neighborhood Hits	126	Shared Neighborhood Hits	75
SwissProt Accessions	Q9Y5T5, Q8NEL3	Gene names	USP16
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.1.2.15) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16) (Deubiquitinating enzyme 16) (Ubiquitin-processing protease UBP-M).

UBP1_HUMAN
NC score	0.708400 (rank : 42)	θ value	4.30538e-10 (rank : 53)
Query Neighborhood Hits	124	Target Neighborhood Hits	259	Shared Neighborhood Hits	74
SwissProt Accessions	O94782, Q9UFR0, Q9UNJ3	Gene names	USP1
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 1 (EC 3.1.2.15) (Ubiquitin thioesterase 1) (Ubiquitin-specific-processing protease 1) (Deubiquitinating enzyme 1) (hUBP).

UBP15_MOUSE
NC score	0.692885 (rank : 43)	θ value	1.68911e-14 (rank : 44)
Query Neighborhood Hits	124	Target Neighborhood Hits	88	Shared Neighborhood Hits	73
SwissProt Accessions	Q8R5H1, Q3UL25	Gene names	Usp15
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.1.2.15) (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15) (Deubiquitinating enzyme 15).

UBP15_HUMAN
NC score	0.692549 (rank : 44)	θ value	2.20605e-14 (rank : 45)
Query Neighborhood Hits	124	Target Neighborhood Hits	92	Shared Neighborhood Hits	73
SwissProt Accessions	Q9Y4E8, Q9HCA6, Q9UNP0, Q9Y5B5	Gene names	USP15, KIAA0529
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.1.2.15) (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15) (Deubiquitinating enzyme 15) (Unph-2) (Unph4).

UBP43_MOUSE
NC score	0.690530 (rank : 45)	θ value	6.00763e-12 (rank : 48)
Query Neighborhood Hits	124	Target Neighborhood Hits	130	Shared Neighborhood Hits	74
SwissProt Accessions	Q8BUM9, Q8VDP5	Gene names	Usp43
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 43 (EC 3.1.2.15) (Ubiquitin thioesterase 43) (Ubiquitin-specific-processing protease 43) (Deubiquitinating enzyme 43).

UBP31_HUMAN
NC score	0.688163 (rank : 46)	θ value	1.33837e-11 (rank : 49)
Query Neighborhood Hits	124	Target Neighborhood Hits	293	Shared Neighborhood Hits	74
SwissProt Accessions	Q70CQ4, Q6AW97, Q6ZTC0, Q6ZTN2, Q9ULL7	Gene names	USP31, KIAA1203
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 31 (EC 3.1.2.15) (Ubiquitin thioesterase 31) (Ubiquitin-specific-processing protease 31) (Deubiquitinating enzyme 31).

UBP11_HUMAN
NC score	0.686750 (rank : 47)	θ value	6.64225e-11 (rank : 52)
Query Neighborhood Hits	124	Target Neighborhood Hits	88	Shared Neighborhood Hits	73
SwissProt Accessions	P51784, Q8IUG6, Q9BWE1	Gene names	USP11, UHX1
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 11 (EC 3.1.2.15) (Ubiquitin thioesterase 11) (Ubiquitin-specific-processing protease 11) (Deubiquitinating enzyme 11).

UBP43_HUMAN
NC score	0.685486 (rank : 48)	θ value	1.74796e-11 (rank : 50)
Query Neighborhood Hits	124	Target Neighborhood Hits	144	Shared Neighborhood Hits	73
SwissProt Accessions	Q70EL4, Q8N2C5, Q96DQ6	Gene names	USP43
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 43 (EC 3.1.2.15) (Ubiquitin thioesterase 43) (Ubiquitin-specific-processing protease 43) (Deubiquitinating enzyme 43).

UBP4_HUMAN
NC score	0.683411 (rank : 49)	θ value	3.18553e-13 (rank : 46)
Query Neighborhood Hits	124	Target Neighborhood Hits	89	Shared Neighborhood Hits	73
SwissProt Accessions	Q13107, O43452, O43453	Gene names	USP4, UNP, UNPH
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15) (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear protein homolog).

UBP4_MOUSE
NC score	0.682501 (rank : 50)	θ value	1.58096e-12 (rank : 47)
Query Neighborhood Hits	124	Target Neighborhood Hits	90	Shared Neighborhood Hits	73
SwissProt Accessions	P35123, O54704	Gene names	Usp4, Unp
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15) (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear protein).

UBP38_HUMAN
NC score	0.673915 (rank : 51)	θ value	5.62301e-10 (rank : 54)
Query Neighborhood Hits	124	Target Neighborhood Hits	97	Shared Neighborhood Hits	71
SwissProt Accessions	Q8NB14, Q8NDF5, Q96DK6, Q96PZ6, Q9BY55	Gene names	USP38, KIAA1891
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 38 (EC 3.1.2.15) (Ubiquitin thioesterase 38) (Ubiquitin-specific-processing protease 38) (Deubiquitinating enzyme 38) (HP43.8KD).

UBP38_MOUSE
NC score	0.665972 (rank : 52)	θ value	8.11959e-09 (rank : 57)
Query Neighborhood Hits	124	Target Neighborhood Hits	100	Shared Neighborhood Hits	71
SwissProt Accessions	Q8BW70, Q8BWL1, Q8BX03	Gene names	Usp38
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 38 (EC 3.1.2.15) (Ubiquitin thioesterase 38) (Ubiquitin-specific-processing protease 38) (Deubiquitinating enzyme 38).

UBP30_HUMAN
NC score	0.645902 (rank : 53)	θ value	3.19293e-05 (rank : 61)
Query Neighborhood Hits	124	Target Neighborhood Hits	94	Shared Neighborhood Hits	71
SwissProt Accessions	Q70CQ3, Q8WTU7, Q96JX4, Q9BSS3	Gene names	USP30
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 30 (EC 3.1.2.15) (Ubiquitin thioesterase 30) (Ubiquitin-specific-processing protease 30) (Deubiquitinating enzyme 30).

UBP10_MOUSE
NC score	0.645152 (rank : 54)	θ value	1.63604e-09 (rank : 56)
Query Neighborhood Hits	124	Target Neighborhood Hits	150	Shared Neighborhood Hits	69
SwissProt Accessions	P52479, Q91VY7	Gene names	Usp10, Ode-1, Uchrp
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15) (Ubiquitin thioesterase 10) (Ubiquitin-specific-processing protease 10) (Deubiquitinating enzyme 10).

UBP10_HUMAN
NC score	0.643215 (rank : 55)	θ value	1.63604e-09 (rank : 55)
Query Neighborhood Hits	124	Target Neighborhood Hits	153	Shared Neighborhood Hits	70
SwissProt Accessions	Q14694, Q9BWG7, Q9NSL7	Gene names	USP10, KIAA0190
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15) (Ubiquitin thioesterase 10) (Ubiquitin-specific-processing protease 10) (Deubiquitinating enzyme 10).

UBP14_HUMAN
NC score	0.638492 (rank : 56)	θ value	1.29631e-06 (rank : 58)
Query Neighborhood Hits	124	Target Neighborhood Hits	89	Shared Neighborhood Hits	72
SwissProt Accessions	P54578	Gene names	USP14, TGT
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15) (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14).

UBP14_MOUSE
NC score	0.612226 (rank : 57)	θ value	1.09739e-05 (rank : 60)
Query Neighborhood Hits	124	Target Neighborhood Hits	87	Shared Neighborhood Hits	70
SwissProt Accessions	Q9JMA1, Q543U5, Q923F2, Q9D0L0	Gene names	Usp14
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15) (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14).

UBP28_HUMAN
NC score	0.589569 (rank : 58)	θ value	2.60593e-15 (rank : 42)
Query Neighborhood Hits	124	Target Neighborhood Hits	117	Shared Neighborhood Hits	73
SwissProt Accessions	Q96RU2, Q9P213	Gene names	USP28, KIAA1515
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.1.2.15) (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28) (Deubiquitinating enzyme 28).

UBP28_MOUSE
NC score	0.583392 (rank : 59)	θ value	4.44505e-15 (rank : 43)
Query Neighborhood Hits	124	Target Neighborhood Hits	178	Shared Neighborhood Hits	73
SwissProt Accessions	Q5I043, Q6NZP3, Q6ZPP1, Q8BWI1	Gene names	Usp28, Kiaa1515
Domain Architecture	No domain graphic available
Description	Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.1.2.15) (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28) (Deubiquitinating enzyme 28).

UBP25_MOUSE
NC score	0.583221 (rank : 60)	θ value	7.32683e-18 (rank : 33)
Query Neighborhood Hits	124	Target Neighborhood Hits	116	Shared Neighborhood Hits	73
SwissProt Accessions	P57080, Q80ZT9	Gene names	Usp25
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 25 (EC 3.1.2.15) (Ubiquitin thioesterase 25) (Ubiquitin-specific-processing protease 25) (Deubiquitinating enzyme 25) (mUSP25).

UBP25_HUMAN
NC score	0.581865 (rank : 61)	θ value	1.92812e-18 (rank : 32)
Query Neighborhood Hits	124	Target Neighborhood Hits	124	Shared Neighborhood Hits	72
SwissProt Accessions	Q9UHP3, Q9H9W1	Gene names	USP25, USP21
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 25 (EC 3.1.2.15) (Ubiquitin thioesterase 25) (Ubiquitin-specific-processing protease 25) (Deubiquitinating enzyme 25) (USP on chromosome 21).

UBP37_HUMAN
NC score	0.567420 (rank : 62)	θ value	0.00228821 (rank : 66)
Query Neighborhood Hits	124	Target Neighborhood Hits	208	Shared Neighborhood Hits	74
SwissProt Accessions	Q86T82, Q9HCH8	Gene names	USP37, KIAA1594
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 37 (EC 3.1.2.15) (Ubiquitin thioesterase 37) (Ubiquitin-specific-processing protease 37) (Deubiquitinating enzyme 37).

UBP32_HUMAN
NC score	0.548285 (rank : 63)	θ value	0.00298849 (rank : 67)
Query Neighborhood Hits	124	Target Neighborhood Hits	170	Shared Neighborhood Hits	73
SwissProt Accessions	Q8NFA0, Q9BX85, Q9Y591	Gene names	USP32, USP10
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 32 (EC 3.1.2.15) (Ubiquitin thioesterase 32) (Ubiquitin-specific-processing protease 32) (Deubiquitinating enzyme 32) (NY-REN-60 antigen).

UBP6_HUMAN
NC score	0.517281 (rank : 64)	θ value	0.00390308 (rank : 68)
Query Neighborhood Hits	124	Target Neighborhood Hits	188	Shared Neighborhood Hits	73
SwissProt Accessions	P35125, Q15634, Q86WP6, Q8IWT4	Gene names	USP6, TRE2
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 6 (EC 3.1.2.15) (Ubiquitin thioesterase 6) (Ubiquitin-specific-processing protease 6) (Deubiquitinating enzyme 6) (Proto-oncogene TRE-2).

SNUT2_MOUSE
NC score	0.494594 (rank : 65)	θ value	1.38821 (rank : 84)
Query Neighborhood Hits	124	Target Neighborhood Hits	80	Shared Neighborhood Hits	60
SwissProt Accessions	Q3TIX9, Q3TI55, Q8BLI5, Q8BZZ5, Q9CQR1	Gene names	Usp39
Domain Architecture	No domain graphic available
Description	U4/U6.U5 tri-snRNP-associated protein 2 (Inactive ubiquitin-specific peptidase 39).

UBP29_HUMAN
NC score	0.490359 (rank : 66)	θ value	0.00035302 (rank : 63)
Query Neighborhood Hits	124	Target Neighborhood Hits	94	Shared Neighborhood Hits	71
SwissProt Accessions	Q9HBJ7	Gene names	USP29
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 29 (EC 3.1.2.15) (Ubiquitin thioesterase 29) (Ubiquitin-specific-processing protease 29) (Deubiquitinating enzyme 29).

SNUT2_HUMAN
NC score	0.482722 (rank : 67)	θ value	1.38821 (rank : 83)
Query Neighborhood Hits	124	Target Neighborhood Hits	79	Shared Neighborhood Hits	59
SwissProt Accessions	Q53GS9, Q6NX47, Q96RK9, Q9BV89, Q9H381, Q9P050, Q9Y310	Gene names	USP39
Domain Architecture	No domain graphic available
Description	U4/U6.U5 tri-snRNP-associated protein 2 (U4/U6.U5 tri-snRNP-associated 65 kDa protein) (65K) (Inactive ubiquitin-specific peptidase 39) (SAD1 homolog).

UBP13_HUMAN
NC score	0.480188 (rank : 68)	θ value	5.44631e-05 (rank : 62)
Query Neighborhood Hits	124	Target Neighborhood Hits	99	Shared Neighborhood Hits	72
SwissProt Accessions	Q92995	Gene names	USP13, ISOT3
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 13 (EC 3.1.2.15) (Ubiquitin thioesterase 13) (Ubiquitin-specific-processing protease 13) (Deubiquitinating enzyme 13) (Isopeptidase T-3) (ISOT-3).

UBP5_HUMAN
NC score	0.474780 (rank : 69)	θ value	0.000602161 (rank : 64)
Query Neighborhood Hits	124	Target Neighborhood Hits	109	Shared Neighborhood Hits	73
SwissProt Accessions	P45974, Q96J22	Gene names	USP5, ISOT
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15) (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5) (Deubiquitinating enzyme 5) (Isopeptidase T).

UBP5_MOUSE
NC score	0.474383 (rank : 70)	θ value	0.000602161 (rank : 65)
Query Neighborhood Hits	124	Target Neighborhood Hits	106	Shared Neighborhood Hits	74
SwissProt Accessions	P56399	Gene names	Usp5, Isot
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15) (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5) (Deubiquitinating enzyme 5) (Isopeptidase T).

UBP29_MOUSE
NC score	0.464360 (rank : 71)	θ value	0.0193708 (rank : 69)
Query Neighborhood Hits	124	Target Neighborhood Hits	95	Shared Neighborhood Hits	72
SwissProt Accessions	Q9ES63	Gene names	Usp29
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 29 (EC 3.1.2.15) (Ubiquitin thioesterase 29) (Ubiquitin-specific-processing protease 29) (Deubiquitinating enzyme 29).

UBP26_HUMAN
NC score	0.445758 (rank : 72)	θ value	0.47712 (rank : 73)
Query Neighborhood Hits	124	Target Neighborhood Hits	108	Shared Neighborhood Hits	70
SwissProt Accessions	Q9BXU7	Gene names	USP26
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 26 (EC 3.1.2.15) (Ubiquitin thioesterase 26) (Ubiquitin-specific-processing protease 26) (Deubiquitinating enzyme 26).

UBP26_MOUSE
NC score	0.373467 (rank : 73)	θ value	5.27518 (rank : 104)
Query Neighborhood Hits	124	Target Neighborhood Hits	107	Shared Neighborhood Hits	70
SwissProt Accessions	Q99MX1	Gene names	Usp26
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 26 (EC 3.1.2.15) (Ubiquitin thioesterase 26) (Ubiquitin-specific-processing protease 26) (Deubiquitinating enzyme 26).

BRAP_MOUSE
NC score	0.095952 (rank : 74)	θ value	θ > 10 (rank : 126)
Query Neighborhood Hits	124	Target Neighborhood Hits	409	Shared Neighborhood Hits	19
SwissProt Accessions	Q99MP8, Q8CC00, Q8CHX1, Q99MP7, Q9CXX8	Gene names	Brap
Domain Architecture	No domain graphic available
Description	BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes mitogenic signal propagation) (IMP).

BRAP_HUMAN
NC score	0.084778 (rank : 75)	θ value	θ > 10 (rank : 125)
Query Neighborhood Hits	124	Target Neighborhood Hits	560	Shared Neighborhood Hits	24
SwissProt Accessions	Q7Z569, O43238, O75341	Gene names	BRAP, RNF52
Domain Architecture	No domain graphic available
Description	BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes mitogenic signal propagation) (IMP) (RING finger protein 52) (NY-REN-63 antigen).

UCRP_MOUSE
NC score	0.073435 (rank : 76)	θ value	0.21417 (rank : 71)
Query Neighborhood Hits	124	Target Neighborhood Hits	28	Shared Neighborhood Hits	4
SwissProt Accessions	Q64339, Q8K0H3	Gene names	Isg15, G1p2, Ucrp
Domain Architecture
Description	Ubiquitin cross-reactive protein precursor (Interferon-stimulated protein 15) (IP17).

GGNB1_MOUSE
NC score	0.067661 (rank : 77)	θ value	θ > 10 (rank : 128)
Query Neighborhood Hits	124	Target Neighborhood Hits	23	Shared Neighborhood Hits	5
SwissProt Accessions	Q6K1E7, Q8C5T9	Gene names	Ggnbp1
Domain Architecture	No domain graphic available
Description	Gametogenetin-binding protein 1.

HDAC6_MOUSE
NC score	0.065237 (rank : 78)	θ value	θ > 10 (rank : 130)
Query Neighborhood Hits	124	Target Neighborhood Hits	88	Shared Neighborhood Hits	12
SwissProt Accessions	Q9Z2V5	Gene names	Hdac6
Domain Architecture
Description	Histone deacetylase 6 (HD6) (Histone deacetylase mHDA2).

HDAC6_HUMAN
NC score	0.063102 (rank : 79)	θ value	θ > 10 (rank : 129)
Query Neighborhood Hits	124	Target Neighborhood Hits	145	Shared Neighborhood Hits	16
SwissProt Accessions	Q9UBN7	Gene names	HDAC6
Domain Architecture
Description	Histone deacetylase 6 (HD6).

UCRP_HUMAN
NC score	0.055997 (rank : 80)	θ value	1.06291 (rank : 80)
Query Neighborhood Hits	124	Target Neighborhood Hits	26	Shared Neighborhood Hits	4
SwissProt Accessions	P05161, Q7Z2G2, Q96GF0	Gene names	ISG15, G1P2, UCRP
Domain Architecture
Description	Interferon-induced 17 kDa protein precursor [Contains: Ubiquitin cross-reactive protein (hUCRP) (Interferon-induced 15 kDa protein)].

ZRAB2_HUMAN
NC score	0.054260 (rank : 81)	θ value	0.813845 (rank : 76)
Query Neighborhood Hits	124	Target Neighborhood Hits	120	Shared Neighborhood Hits	7
SwissProt Accessions	O95218, Q9UP63	Gene names	ZRANB2, ZIS, ZNF265
Domain Architecture
Description	Zinc finger Ran-binding domain-containing protein 2 Zinc finger protein 265 (Zinc finger, splicing).

GGNB1_HUMAN
NC score	0.052532 (rank : 82)	θ value	θ > 10 (rank : 127)
Query Neighborhood Hits	124	Target Neighborhood Hits	10	Shared Neighborhood Hits	5
SwissProt Accessions	Q5YKI7, Q5YKI8	Gene names	GGNBP1
Domain Architecture	No domain graphic available
Description	Gametogenetin-binding protein 1.

UBP54_MOUSE
NC score	0.052354 (rank : 83)	θ value	θ > 10 (rank : 132)
Query Neighborhood Hits	124	Target Neighborhood Hits	19	Shared Neighborhood Hits	13
SwissProt Accessions	Q8BL06, Q8BZ28	Gene names	Usp54
Domain Architecture	No domain graphic available
Description	Inactive ubiquitin carboxyl-terminal hydrolase 54 (Inactive ubiquitin- specific peptidase 54).

UBP54_HUMAN
NC score	0.052200 (rank : 84)	θ value	θ > 10 (rank : 131)
Query Neighborhood Hits	124	Target Neighborhood Hits	21	Shared Neighborhood Hits	14
SwissProt Accessions	Q70EL1, Q5F2F4	Gene names	USP54, C10orf29
Domain Architecture	No domain graphic available
Description	Inactive ubiquitin carboxyl-terminal hydrolase 54 (Inactive ubiquitin- specific peptidase 54).

CALX_HUMAN
NC score	0.036551 (rank : 85)	θ value	0.21417 (rank : 70)
Query Neighborhood Hits	124	Target Neighborhood Hits	96	Shared Neighborhood Hits	7
SwissProt Accessions	P27824	Gene names	CANX
Domain Architecture
Description	Calnexin precursor (Major histocompatibility complex class I antigen- binding protein p88) (p90) (IP90).

SIAL_HUMAN
NC score	0.034268 (rank : 86)	θ value	1.06291 (rank : 79)
Query Neighborhood Hits	124	Target Neighborhood Hits	77	Shared Neighborhood Hits	4
SwissProt Accessions	P21815	Gene names	IBSP, BNSP
Domain Architecture
Description	Bone sialoprotein-2 precursor (Bone sialoprotein II) (BSP II) (Cell- binding sialoprotein) (Integrin-binding sialoprotein).

ARS2_HUMAN
NC score	0.033640 (rank : 87)	θ value	1.06291 (rank : 77)
Query Neighborhood Hits	124	Target Neighborhood Hits	186	Shared Neighborhood Hits	15
SwissProt Accessions	Q9BXP5, O95808, Q9BWP6, Q9BXP4	Gene names	ARS2, ASR2
Domain Architecture
Description	Arsenite-resistance protein 2.

ARS2_MOUSE
NC score	0.024429 (rank : 88)	θ value	5.27518 (rank : 98)
Query Neighborhood Hits	124	Target Neighborhood Hits	212	Shared Neighborhood Hits	11
SwissProt Accessions	Q99MR6, Q99MR4, Q99MR5, Q99MR7	Gene names	Ars2, Asr2
Domain Architecture
Description	Arsenite-resistance protein 2.

DEK_MOUSE
NC score	0.021413 (rank : 89)	θ value	5.27518 (rank : 101)
Query Neighborhood Hits	124	Target Neighborhood Hits	280	Shared Neighborhood Hits	12
SwissProt Accessions	Q7TNV0, Q80VC5, Q8BZV6	Gene names	Dek
Domain Architecture	No domain graphic available
Description	Protein DEK.

PRP40_MOUSE
NC score	0.021281 (rank : 90)	θ value	1.81305 (rank : 86)
Query Neighborhood Hits	124	Target Neighborhood Hits	447	Shared Neighborhood Hits	17
SwissProt Accessions	Q9R1C7, Q61049, Q8BQ76, Q8BRW4, Q8C2U1	Gene names	Prpf40a, Fbp11, Fnbp3
Domain Architecture
Description	Pre-mRNA-processing factor 40 homolog A (Formin-binding protein 3) (Formin-binding protein 11) (FBP-11).

DGKH_HUMAN
NC score	0.019220 (rank : 91)	θ value	0.47712 (rank : 72)
Query Neighborhood Hits	124	Target Neighborhood Hits	255	Shared Neighborhood Hits	5
SwissProt Accessions	Q86XP1, Q5VZW0, Q6PI56, Q86XP2, Q8N3N0, Q8N7J9	Gene names	DGKH
Domain Architecture	No domain graphic available
Description	Diacylglycerol kinase eta (EC 2.7.1.107) (Diglyceride kinase eta) (DGK-eta) (DAG kinase eta).

FA44A_HUMAN
NC score	0.018940 (rank : 92)	θ value	8.99809 (rank : 117)
Query Neighborhood Hits	124	Target Neighborhood Hits	280	Shared Neighborhood Hits	15
SwissProt Accessions	Q8NFC6, Q6P0M8	Gene names	FAM44A
Domain Architecture	No domain graphic available
Description	Protein FAM44A.

TF3C5_HUMAN
NC score	0.018435 (rank : 93)	θ value	3.0926 (rank : 91)
Query Neighborhood Hits	124	Target Neighborhood Hits	8	Shared Neighborhood Hits	3
SwissProt Accessions	Q9Y5Q8, Q8N2U7, Q8N857, Q96GD9, Q9H4P2	Gene names	GTF3C5
Domain Architecture	No domain graphic available
Description	General transcription factor 3C polypeptide 5 (Transcription factor IIIC-epsilon subunit) (TF3C-epsilon) (TFIIIC 63 kDa subunit) (TFIIIC63).

NCOR2_MOUSE
NC score	0.018369 (rank : 94)	θ value	8.99809 (rank : 121)
Query Neighborhood Hits	124	Target Neighborhood Hits	790	Shared Neighborhood Hits	17
SwissProt Accessions	Q9WU42, Q9WU43, Q9WUC1	Gene names	Ncor2, Smrt
Domain Architecture
Description	Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor- associating factor) (TRAC).

CCD55_MOUSE
NC score	0.018304 (rank : 95)	θ value	5.27518 (rank : 99)
Query Neighborhood Hits	124	Target Neighborhood Hits	519	Shared Neighborhood Hits	19
SwissProt Accessions	Q5NCR9	Gene names	Ccdc55
Domain Architecture	No domain graphic available
Description	Coiled-coil domain-containing protein 55.

DEK_HUMAN
NC score	0.016962 (rank : 96)	θ value	5.27518 (rank : 100)
Query Neighborhood Hits	124	Target Neighborhood Hits	199	Shared Neighborhood Hits	13
SwissProt Accessions	P35659, Q5TGV4, Q5TGV5	Gene names	DEK
Domain Architecture	No domain graphic available
Description	Protein DEK.

ATRX_MOUSE
NC score	0.015791 (rank : 97)	θ value	8.99809 (rank : 113)
Query Neighborhood Hits	124	Target Neighborhood Hits	682	Shared Neighborhood Hits	24
SwissProt Accessions	Q61687	Gene names	Atrx, Hp1bp2, Xnp
Domain Architecture
Description	Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent helicase ATRX) (X-linked nuclear protein) (Heterochromatin protein 2) (HP1 alpha-interacting protein) (HP1-BP38 protein).

PHLB2_MOUSE
NC score	0.015773 (rank : 98)	θ value	0.62314 (rank : 75)
Query Neighborhood Hits	124	Target Neighborhood Hits	1016	Shared Neighborhood Hits	20
SwissProt Accessions	Q8K1N2, Q3TNI3, Q80Y16, Q8BKV3	Gene names	Phldb2, Ll5b
Domain Architecture	No domain graphic available
Description	Pleckstrin homology-like domain family B member 2 (Protein LL5-beta).

STAC3_MOUSE
NC score	0.015584 (rank : 99)	θ value	1.81305 (rank : 89)
Query Neighborhood Hits	124	Target Neighborhood Hits	232	Shared Neighborhood Hits	7
SwissProt Accessions	Q8BZ71	Gene names	Stac3
Domain Architecture	No domain graphic available
Description	SH3 and cysteine-rich domain-containing protein 3.

NO40_MOUSE
NC score	0.015196 (rank : 100)	θ value	4.03905 (rank : 95)
Query Neighborhood Hits	124	Target Neighborhood Hits	53	Shared Neighborhood Hits	5
SwissProt Accessions	Q9ESX4	Gene names	Zcchc17, Ps1d
Domain Architecture	No domain graphic available
Description	Nucleolar protein of 40 kDa (pNO40) (Zinc finger CCHC domain- containing protein 17) (Putative S1 RNA-binding domain protein) (PS1D protein).

TF3C5_MOUSE
NC score	0.014334 (rank : 101)	θ value	8.99809 (rank : 123)
Query Neighborhood Hits	124	Target Neighborhood Hits	12	Shared Neighborhood Hits	3
SwissProt Accessions	Q8R2T8, Q8BLE3, Q8R0D0	Gene names	Gtf3c5
Domain Architecture	No domain graphic available
Description	General transcription factor 3C polypeptide 5 (Transcription factor IIIC-epsilon subunit) (TF3C-epsilon) (TFIIIC 63 kDa subunit) (TFIIIC63).

PRP40_HUMAN
NC score	0.013489 (rank : 102)	θ value	6.88961 (rank : 110)
Query Neighborhood Hits	124	Target Neighborhood Hits	442	Shared Neighborhood Hits	17
SwissProt Accessions	O75400, O43856, O75404, Q8TBQ1, Q9H782, Q9NWU9, Q9P0Q2, Q9Y5A8	Gene names	PRPF40A, FLAF1, FNBP3, HYPA
Domain Architecture
Description	Pre-mRNA-processing factor 40 homolog A (Formin-binding protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein HYPA/FBP11) (Fas ligand-associated factor 1) (NY-REN-6 antigen).

PAR12_HUMAN
NC score	0.013428 (rank : 103)	θ value	1.38821 (rank : 81)
Query Neighborhood Hits	124	Target Neighborhood Hits	42	Shared Neighborhood Hits	2
SwissProt Accessions	Q9H0J9, Q9H610, Q9NP36, Q9NTI3	Gene names	PARP12, ZC3HDC1
Domain Architecture
Description	Poly [ADP-ribose] polymerase 12 (EC 2.4.2.30) (PARP-12) (Zinc finger CCCH domain-containing protein 1).

ATRX_HUMAN
NC score	0.013220 (rank : 104)	θ value	4.03905 (rank : 92)
Query Neighborhood Hits	124	Target Neighborhood Hits	842	Shared Neighborhood Hits	25
SwissProt Accessions	P46100, P51068, Q15886, Q59FB5, Q59H31, Q5H9A2, Q5JWI4, Q7Z2J1, Q9H0Z1, Q9NTS3	Gene names	ATRX, RAD54L, XH2
Domain Architecture
Description	Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) (Znf- HX).

SEC63_HUMAN
NC score	0.013203 (rank : 105)	θ value	6.88961 (rank : 112)
Query Neighborhood Hits	124	Target Neighborhood Hits	586	Shared Neighborhood Hits	28
SwissProt Accessions	Q9UGP8, O95380, Q86VS9, Q8IWL0, Q9NTE0	Gene names	SEC63, SEC63L
Domain Architecture
Description	Translocation protein SEC63 homolog.

PHLB2_HUMAN
NC score	0.012997 (rank : 106)	θ value	3.0926 (rank : 90)
Query Neighborhood Hits	124	Target Neighborhood Hits	964	Shared Neighborhood Hits	21
SwissProt Accessions	Q86SQ0, Q59EA8, Q68CY3, Q6NT98, Q8N8U8, Q8NAB1, Q8NCU5	Gene names	PHLDB2, LL5B
Domain Architecture	No domain graphic available
Description	Pleckstrin homology-like domain family B member 2 (Protein LL5-beta).

GDAP1_MOUSE
NC score	0.010677 (rank : 107)	θ value	6.88961 (rank : 107)
Query Neighborhood Hits	124	Target Neighborhood Hits	64	Shared Neighborhood Hits	3
SwissProt Accessions	O88741, Q8C7Q5, Q9CTN2	Gene names	Gdap1
Domain Architecture
Description	Ganglioside-induced differentiation-associated protein 1 (GDAP1).

NCOR2_HUMAN
NC score	0.010253 (rank : 108)	θ value	4.03905 (rank : 94)
Query Neighborhood Hits	124	Target Neighborhood Hits	870	Shared Neighborhood Hits	15
SwissProt Accessions	Q9Y618, O00613, O15416, Q13354, Q9Y5U0	Gene names	NCOR2, CTG26
Domain Architecture
Description	Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor- associating factor) (TRAC) (CTG repeat protein 26) (SMAP270).

ALBU_HUMAN
NC score	0.010165 (rank : 109)	θ value	5.27518 (rank : 96)
Query Neighborhood Hits	124	Target Neighborhood Hits	19	Shared Neighborhood Hits	3
SwissProt Accessions	P02768, O95574, P04277, Q13140, Q68DN5, Q6UXK4, Q9P157, Q9P1I7, Q9UHS3, Q9UJZ0	Gene names	ALB
Domain Architecture
Description	Serum albumin precursor.

SDCG8_HUMAN
NC score	0.009141 (rank : 110)	θ value	1.06291 (rank : 78)
Query Neighborhood Hits	124	Target Neighborhood Hits	1002	Shared Neighborhood Hits	18
SwissProt Accessions	Q86SQ7, O60527, Q3ZCR6, Q8N5F2, Q9P0F1	Gene names	SDCCAG8, CCCAP
Domain Architecture	No domain graphic available
Description	Serologically defined colon cancer antigen 8 (Centrosomal colon cancer autoantigen protein) (hCCCAP) (Antigen NY-CO-8).

MYT1L_MOUSE
NC score	0.008751 (rank : 111)	θ value	6.88961 (rank : 109)
Query Neighborhood Hits	124	Target Neighborhood Hits	461	Shared Neighborhood Hits	10
SwissProt Accessions	P97500, O08996, Q8C643, Q8C7L4, Q8CHB4	Gene names	Myt1l, Kiaa1106, Nzf1, Png1
Domain Architecture	No domain graphic available
Description	Myelin transcription factor 1-like protein (MyT1L protein) (Postmitotic neural gene 1 protein) (Zinc finger protein Png-1) (Neural zinc finger factor 1) (NZF-1).

HDGF_MOUSE
NC score	0.008585 (rank : 112)	θ value	8.99809 (rank : 118)
Query Neighborhood Hits	124	Target Neighborhood Hits	102	Shared Neighborhood Hits	7
SwissProt Accessions	P51859, Q8BPG7, Q9CYA4, Q9JK87	Gene names	Hdgf, Tdrm1
Domain Architecture
Description	Hepatoma-derived growth factor (HDGF).

PSD7_MOUSE
NC score	0.008263 (rank : 113)	θ value	6.88961 (rank : 111)
Query Neighborhood Hits	124	Target Neighborhood Hits	24	Shared Neighborhood Hits	2
SwissProt Accessions	P26516, Q3TW61, Q8C0I8	Gene names	Psmd7, Mov-34, Mov34
Domain Architecture
Description	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein).

CAN3_HUMAN
NC score	0.008229 (rank : 114)	θ value	0.62314 (rank : 74)
Query Neighborhood Hits	124	Target Neighborhood Hits	96	Shared Neighborhood Hits	2
SwissProt Accessions	P20807, Q9BTU4, Q9Y5S6, Q9Y5S7	Gene names	CAPN3, CANP3, CANPL3, NCL1
Domain Architecture
Description	Calpain-3 (EC 3.4.22.-) (Calpain L3) (Calpain p94) (Calcium-activated neutral proteinase 3) (CANP 3) (Muscle-specific calcium-activated neutral protease 3) (nCL-1).

TAF3_HUMAN
NC score	0.007847 (rank : 115)	θ value	5.27518 (rank : 103)
Query Neighborhood Hits	124	Target Neighborhood Hits	568	Shared Neighborhood Hits	15
SwissProt Accessions	Q5VWG9, Q6GMS5, Q6P6B5, Q86VY6, Q9BQS9, Q9UFI8	Gene names	TAF3
Domain Architecture	No domain graphic available
Description	Transcription initiation factor TFIID subunit 3 (TBP-associated factor 3) (Transcription initiation factor TFIID 140 kDa subunit) (140 kDa TATA box-binding protein-associated factor) (TAF140) (TAFII140).

AKP8L_HUMAN
NC score	0.007329 (rank : 116)	θ value	6.88961 (rank : 106)
Query Neighborhood Hits	124	Target Neighborhood Hits	89	Shared Neighborhood Hits	4
SwissProt Accessions	Q9ULX6, O94792, Q96J58, Q9NRQ0, Q9UGM0	Gene names	AKAP8L, NAKAP95
Domain Architecture
Description	A-kinase anchor protein 8-like (AKAP8-like protein) (Neighbor of A- kinase-anchoring protein 95) (Neighbor of AKAP95) (Homologous to AKAP95 protein) (HA95) (Helicase A-binding protein 95) (HAP95).

RNF8_HUMAN
NC score	0.007006 (rank : 117)	θ value	1.81305 (rank : 88)
Query Neighborhood Hits	124	Target Neighborhood Hits	622	Shared Neighborhood Hits	8
SwissProt Accessions	O76064	Gene names	RNF8, KIAA0646
Domain Architecture
Description	Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger protein 8).

CSTN1_HUMAN
NC score	0.006870 (rank : 118)	θ value	1.81305 (rank : 85)
Query Neighborhood Hits	124	Target Neighborhood Hits	183	Shared Neighborhood Hits	3
SwissProt Accessions	O94985	Gene names	CLSTN1, CS1, KIAA0911
Domain Architecture	No domain graphic available
Description	Calsyntenin-1 precursor.

NOLC1_HUMAN
NC score	0.006166 (rank : 119)	θ value	8.99809 (rank : 122)
Query Neighborhood Hits	124	Target Neighborhood Hits	452	Shared Neighborhood Hits	9
SwissProt Accessions	Q14978, Q15030	Gene names	NOLC1, KIAA0035
Domain Architecture
Description	Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein) (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar and coiled-body phosphoprotein 1).

ZN292_HUMAN
NC score	0.005388 (rank : 120)	θ value	5.27518 (rank : 105)
Query Neighborhood Hits	124	Target Neighborhood Hits	918	Shared Neighborhood Hits	15
SwissProt Accessions	O60281, Q9H8G3, Q9H8J4	Gene names	ZNF292, KIAA0530
Domain Architecture	No domain graphic available
Description	Zinc finger protein 292.

RAD50_HUMAN
NC score	0.005375 (rank : 121)	θ value	1.38821 (rank : 82)
Query Neighborhood Hits	124	Target Neighborhood Hits	1317	Shared Neighborhood Hits	23
SwissProt Accessions	Q92878, O43254, Q6GMT7, Q6P5X3, Q9UP86	Gene names	RAD50
Domain Architecture	No domain graphic available
Description	DNA repair protein RAD50 (EC 3.6.-.-) (hRAD50).

FBXW7_HUMAN
NC score	0.004378 (rank : 122)	θ value	4.03905 (rank : 93)
Query Neighborhood Hits	124	Target Neighborhood Hits	433	Shared Neighborhood Hits	7
SwissProt Accessions	Q969H0, Q96A16, Q96LE0, Q96RI2, Q9NUX6	Gene names	FBXW7, FBW7, FBX30, SEL10
Domain Architecture
Description	F-box/WD repeat protein 7 (F-box and WD-40 domain protein 7) (F-box protein FBX30) (hCdc4) (Archipelago homolog) (hAgo) (SEL-10).

RAD50_MOUSE
NC score	0.004351 (rank : 123)	θ value	1.81305 (rank : 87)
Query Neighborhood Hits	124	Target Neighborhood Hits	1366	Shared Neighborhood Hits	27
SwissProt Accessions	P70388, Q6PEB0, Q8C2T7, Q9CU59	Gene names	Rad50
Domain Architecture	No domain graphic available
Description	DNA repair protein RAD50 (EC 3.6.-.-) (mRad50).

BAZ2B_HUMAN
NC score	0.004222 (rank : 124)	θ value	8.99809 (rank : 114)
Query Neighborhood Hits	124	Target Neighborhood Hits	803	Shared Neighborhood Hits	15
SwissProt Accessions	Q9UIF8, Q96EA1, Q96SQ8, Q9P252, Q9Y4N8	Gene names	BAZ2B, KIAA1476
Domain Architecture
Description	Bromodomain adjacent to zinc finger domain 2B (hWALp4).

TICN3_MOUSE
NC score	0.003213 (rank : 125)	θ value	8.99809 (rank : 124)
Query Neighborhood Hits	124	Target Neighborhood Hits	83	Shared Neighborhood Hits	2
SwissProt Accessions	Q8BKV0, Q9ER59	Gene names	Spock3
Domain Architecture	No domain graphic available
Description	Testican-3 precursor (SPARC/osteonectin, CWCV, and Kazal-like domains proteoglycan 3).

ITSN2_HUMAN
NC score	0.000281 (rank : 126)	θ value	5.27518 (rank : 102)
Query Neighborhood Hits	124	Target Neighborhood Hits	1173	Shared Neighborhood Hits	14
SwissProt Accessions	Q9NZM3, O95062, Q15812, Q9HAK4, Q9NXE6, Q9NYG0, Q9NZM2, Q9ULG4	Gene names	ITSN2, KIAA1256, SH3D1B, SWAP
Domain Architecture
Description	Intersectin-2 (SH3 domain-containing protein 1B) (SH3P18) (SH3P18-like WASP-associated protein).

BRWD1_HUMAN
NC score	-0.000067 (rank : 127)	θ value	8.99809 (rank : 116)
Query Neighborhood Hits	124	Target Neighborhood Hits	448	Shared Neighborhood Hits	7
SwissProt Accessions	Q9NSI6, O43721, Q5R2V0, Q5R2V1, Q8TCV3, Q96QG9, Q96QH0, Q9NUK1	Gene names	BRWD1, C21orf107, WDR9
Domain Architecture
Description	Bromodomain and WD repeat domain-containing protein 1 (WD repeat protein 9).

ANK3_HUMAN
NC score	-0.000704 (rank : 128)	θ value	5.27518 (rank : 97)
Query Neighborhood Hits	124	Target Neighborhood Hits	853	Shared Neighborhood Hits	20
SwissProt Accessions	Q12955	Gene names	ANK3
Domain Architecture
Description	Ankyrin-3 (ANK-3) (Ankyrin-G).

BPA1_MOUSE
NC score	-0.000946 (rank : 129)	θ value	8.99809 (rank : 115)
Query Neighborhood Hits	124	Target Neighborhood Hits	1477	Shared Neighborhood Hits	20
SwissProt Accessions	Q91ZU6, Q91ZU7	Gene names	Dst, Bpag1
Domain Architecture
Description	Bullous pemphigoid antigen 1, isoforms 1/2/3/4 (BPA) (Hemidesmosomal plaque protein) (Dystonia musculorum protein) (Dystonin).

MINK1_MOUSE
NC score	-0.005861 (rank : 130)	θ value	6.88961 (rank : 108)
Query Neighborhood Hits	124	Target Neighborhood Hits	1451	Shared Neighborhood Hits	14
SwissProt Accessions	Q9JM52, Q921M6, Q9JM92	Gene names	Mink1, Map4k6, Mink
Domain Architecture
Description	Misshapen-like kinase 1 (EC 2.7.11.1) (Mitogen-activated protein kinase kinase kinase kinase 6) (MAPK/ERK kinase kinase kinase 6) (MEK kinase kinase 6) (MEKKK 6) (Misshapen/NIK-related kinase) (GCK family kinase MiNK).

MKNK2_MOUSE
NC score	-0.005909 (rank : 131)	θ value	8.99809 (rank : 120)
Query Neighborhood Hits	124	Target Neighborhood Hits	819	Shared Neighborhood Hits	4
SwissProt Accessions	Q8CDB0, O08606, Q75PY0, Q9D893	Gene names	Mknk2, Mnk2
Domain Architecture
Description	MAP kinase-interacting serine/threonine-protein kinase 2 (EC 2.7.11.1) (MAP kinase signal-integrating kinase 2) (Mnk2).

KPCT_MOUSE
NC score	-0.006034 (rank : 132)	θ value	8.99809 (rank : 119)
Query Neighborhood Hits	124	Target Neighborhood Hits	895	Shared Neighborhood Hits	6
SwissProt Accessions	Q02111	Gene names	Prkcq, Pkcq
Domain Architecture
Description	Protein kinase C theta type (EC 2.7.11.13) (nPKC-theta).