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Network neighborhood for query Sequence : NKX61_HUMAN

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NKX61_HUMAN
SwissProt Accessions	P78426	Gene names	NKX6-1, NKX6A
Domain Architecture
Description	Homeobox protein Nkx-6.1.
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

NKX61_MOUSE
θ value	2.62879e-100 (rank : 1)	NC score	0.996173 (rank : 2)
Query Neighborhood Hits	431	Target Neighborhood Hits	439	Shared Neighborhood Hits	401
SwissProt Accessions	Q99MA9, Q9ERQ7	Gene names	Nkx6-1, Nkx6.1, Nkx6a
Domain Architecture
Description	Homeobox protein Nkx-6.1.

NKX61_HUMAN
θ value	8.19079e-94 (rank : 2)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	431	Target Neighborhood Hits	431	Shared Neighborhood Hits	431
SwissProt Accessions	P78426	Gene names	NKX6-1, NKX6A
Domain Architecture
Description	Homeobox protein Nkx-6.1.

HMX3_MOUSE
θ value	1.99529e-15 (rank : 3)	NC score	0.941977 (rank : 12)
Query Neighborhood Hits	431	Target Neighborhood Hits	342	Shared Neighborhood Hits	316
SwissProt Accessions	P42581	Gene names	Hmx3, Nkx-5.1, Nkx5-1
Domain Architecture
Description	Homeobox protein HMX3 (Homeobox protein Nkx-5.1).

TLX3_HUMAN
θ value	5.8054e-15 (rank : 4)	NC score	0.922547 (rank : 48)
Query Neighborhood Hits	431	Target Neighborhood Hits	403	Shared Neighborhood Hits	318
SwissProt Accessions	O43711, Q96AD3	Gene names	TLX3, HOX11L2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox protein Hox-11L2).

TLX3_MOUSE
θ value	7.58209e-15 (rank : 5)	NC score	0.928249 (rank : 29)
Query Neighborhood Hits	431	Target Neighborhood Hits	346	Shared Neighborhood Hits	318
SwissProt Accessions	O55144	Gene names	Tlx3, Hox11l2, Rnx, Tlx1l2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox TLX-3) (Homeobox protein Hox-11L2) (Respiratory neuron homeobox protein).

HMX2_MOUSE
θ value	1.68911e-14 (rank : 6)	NC score	0.945212 (rank : 4)
Query Neighborhood Hits	431	Target Neighborhood Hits	354	Shared Neighborhood Hits	321
SwissProt Accessions	P43687, Q8R1Q2	Gene names	Hmx2, Nkx-5.2, Nkx5-2
Domain Architecture
Description	Homeobox protein HMX2 (Homeobox protein Nkx-5.2).

HLX1_HUMAN
θ value	4.91457e-14 (rank : 7)	NC score	0.924049 (rank : 41)
Query Neighborhood Hits	431	Target Neighborhood Hits	370	Shared Neighborhood Hits	307
SwissProt Accessions	Q14774, Q15988	Gene names	HLX1
Domain Architecture
Description	Homeobox protein HLX1 (Homeobox protein HB24).

DBX1_MOUSE
θ value	6.41864e-14 (rank : 8)	NC score	0.942020 (rank : 11)
Query Neighborhood Hits	431	Target Neighborhood Hits	346	Shared Neighborhood Hits	321
SwissProt Accessions	P52950	Gene names	Dbx1, Dbx
Domain Architecture
Description	Homeobox protein DBX1.

HLXB9_MOUSE
θ value	6.41864e-14 (rank : 9)	NC score	0.942406 (rank : 9)
Query Neighborhood Hits	431	Target Neighborhood Hits	354	Shared Neighborhood Hits	325
SwissProt Accessions	Q9QZW9	Gene names	Hlxb9
Domain Architecture
Description	Homeobox protein HB9.

TLX2_HUMAN
θ value	6.41864e-14 (rank : 10)	NC score	0.929909 (rank : 28)
Query Neighborhood Hits	431	Target Neighborhood Hits	352	Shared Neighborhood Hits	314
SwissProt Accessions	O43763, Q9UQ48	Gene names	TLX2, HOX11L1, NCX
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Neural crest homeobox protein).

TLX2_MOUSE
θ value	6.41864e-14 (rank : 11)	NC score	0.930996 (rank : 23)
Query Neighborhood Hits	431	Target Neighborhood Hits	336	Shared Neighborhood Hits	312
SwissProt Accessions	Q61663	Gene names	Tlx2, Hox11l1, Tlx1l1
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Homeobox TLX-2) (PMUR10F).

HHEX_HUMAN
θ value	1.09485e-13 (rank : 12)	NC score	0.938659 (rank : 17)
Query Neighborhood Hits	431	Target Neighborhood Hits	358	Shared Neighborhood Hits	309
SwissProt Accessions	Q03014	Gene names	HHEX, HEX, PRH, PRHX
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

TLX1_HUMAN
θ value	1.09485e-13 (rank : 13)	NC score	0.923682 (rank : 44)
Query Neighborhood Hits	431	Target Neighborhood Hits	347	Shared Neighborhood Hits	314
SwissProt Accessions	P31314, O75699, Q9HCA0	Gene names	TLX1, HOX11, TCL3
Domain Architecture
Description	T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (TCL-3 proto-oncogene).

DLX1_HUMAN
θ value	1.42992e-13 (rank : 14)	NC score	0.930212 (rank : 26)
Query Neighborhood Hits	431	Target Neighborhood Hits	343	Shared Neighborhood Hits	322
SwissProt Accessions	P56177, Q53ZU4, Q8IYB2	Gene names	DLX1
Domain Architecture
Description	Homeobox protein DLX-1.

DLX1_MOUSE
θ value	1.42992e-13 (rank : 15)	NC score	0.929987 (rank : 27)
Query Neighborhood Hits	431	Target Neighborhood Hits	343	Shared Neighborhood Hits	322
SwissProt Accessions	Q64317	Gene names	Dlx1
Domain Architecture
Description	Homeobox protein DLX-1.

TLX1_MOUSE
θ value	1.42992e-13 (rank : 16)	NC score	0.923129 (rank : 45)
Query Neighborhood Hits	431	Target Neighborhood Hits	347	Shared Neighborhood Hits	313
SwissProt Accessions	P43345	Gene names	Tlx1, Hox11, Tlx-1
Domain Architecture
Description	T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (Homeobox TLX-1).

HLX1_MOUSE
θ value	1.86753e-13 (rank : 17)	NC score	0.923047 (rank : 46)
Query Neighborhood Hits	431	Target Neighborhood Hits	362	Shared Neighborhood Hits	306
SwissProt Accessions	Q61670	Gene names	Hlx1, Hlx
Domain Architecture
Description	Homeobox protein HLX1.

EMX2_HUMAN
θ value	3.18553e-13 (rank : 18)	NC score	0.942458 (rank : 8)
Query Neighborhood Hits	431	Target Neighborhood Hits	341	Shared Neighborhood Hits	322
SwissProt Accessions	Q04743, Q96NN8, Q9BQF4	Gene names	EMX2
Domain Architecture
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

EMX2_MOUSE
θ value	3.18553e-13 (rank : 19)	NC score	0.942546 (rank : 7)
Query Neighborhood Hits	431	Target Neighborhood Hits	340	Shared Neighborhood Hits	323
SwissProt Accessions	Q04744, Q80UE7	Gene names	Emx2, Emx-2
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

HHEX_MOUSE
θ value	3.18553e-13 (rank : 20)	NC score	0.939250 (rank : 15)
Query Neighborhood Hits	431	Target Neighborhood Hits	350	Shared Neighborhood Hits	314
SwissProt Accessions	P43120	Gene names	Hhex, Prhx
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

NKX32_HUMAN
θ value	7.09661e-13 (rank : 21)	NC score	0.932352 (rank : 21)
Query Neighborhood Hits	431	Target Neighborhood Hits	323	Shared Neighborhood Hits	310
SwissProt Accessions	P78367	Gene names	BAPX1, NKX3B
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

NKX32_MOUSE
θ value	7.09661e-13 (rank : 22)	NC score	0.930270 (rank : 25)
Query Neighborhood Hits	431	Target Neighborhood Hits	326	Shared Neighborhood Hits	309
SwissProt Accessions	P97503	Gene names	Bapx1, Nkx-3.2, Nkx3-2, Nkx3b
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

EMX1_HUMAN
θ value	9.26847e-13 (rank : 23)	NC score	0.943132 (rank : 6)
Query Neighborhood Hits	431	Target Neighborhood Hits	336	Shared Neighborhood Hits	320
SwissProt Accessions	Q04741, Q86XB0	Gene names	EMX1
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX1 (Empty spiracles homolog 1) (Empty spiracles- like protein 1).

HLXB9_HUMAN
θ value	9.26847e-13 (rank : 24)	NC score	0.942204 (rank : 10)
Query Neighborhood Hits	431	Target Neighborhood Hits	336	Shared Neighborhood Hits	320
SwissProt Accessions	P50219, Q9Y648	Gene names	HLXB9
Domain Architecture
Description	Homeobox protein HB9.

HXA7_HUMAN
θ value	1.2105e-12 (rank : 25)	NC score	0.890508 (rank : 116)
Query Neighborhood Hits	431	Target Neighborhood Hits	309	Shared Neighborhood Hits	303
SwissProt Accessions	P31268, O43368, O43486, O95655, Q9NSC8, Q9UDM1	Gene names	HOXA7, HOX1A
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1A) (Hox 1.1).

HXA7_MOUSE
θ value	1.2105e-12 (rank : 26)	NC score	0.892298 (rank : 109)
Query Neighborhood Hits	431	Target Neighborhood Hits	318	Shared Neighborhood Hits	304
SwissProt Accessions	P02830, Q544P0	Gene names	Hoxa7, Hox-1.1, Hoxa-7
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1.1) (M6-12) (M6).

HXC8_HUMAN
θ value	1.2105e-12 (rank : 27)	NC score	0.874644 (rank : 153)
Query Neighborhood Hits	431	Target Neighborhood Hits	327	Shared Neighborhood Hits	307
SwissProt Accessions	P31273, O15221, O15362	Gene names	HOXC8, HOX3A
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3A).

HXC8_MOUSE
θ value	1.2105e-12 (rank : 28)	NC score	0.874683 (rank : 152)
Query Neighborhood Hits	431	Target Neighborhood Hits	327	Shared Neighborhood Hits	307
SwissProt Accessions	P09025	Gene names	Hoxc8, Hox-3.1, Hoxc-8
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3.1) (M31).

DLX2_MOUSE
θ value	1.58096e-12 (rank : 29)	NC score	0.926309 (rank : 36)
Query Neighborhood Hits	431	Target Neighborhood Hits	352	Shared Neighborhood Hits	325
SwissProt Accessions	P40764	Gene names	Dlx2, Tes-1, Tes1
Domain Architecture
Description	Homeobox protein DLX-2 (Homeobox protein TES-1).

DLX2_HUMAN
θ value	2.0648e-12 (rank : 30)	NC score	0.926884 (rank : 32)
Query Neighborhood Hits	431	Target Neighborhood Hits	355	Shared Neighborhood Hits	326
SwissProt Accessions	Q07687	Gene names	DLX2
Domain Architecture
Description	Homeobox protein DLX-2.

HXB8_MOUSE
θ value	2.0648e-12 (rank : 31)	NC score	0.874703 (rank : 151)
Query Neighborhood Hits	431	Target Neighborhood Hits	325	Shared Neighborhood Hits	314
SwissProt Accessions	P09632	Gene names	Hoxb8, Hox-2.4, Hoxb-8
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2.4).

MSX2_HUMAN
θ value	2.0648e-12 (rank : 32)	NC score	0.926247 (rank : 37)
Query Neighborhood Hits	431	Target Neighborhood Hits	337	Shared Neighborhood Hits	313
SwissProt Accessions	P35548	Gene names	MSX2, HOX8
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8).

NKX12_MOUSE
θ value	2.69671e-12 (rank : 33)	NC score	0.949421 (rank : 3)
Query Neighborhood Hits	431	Target Neighborhood Hits	332	Shared Neighborhood Hits	311
SwissProt Accessions	P42580, Q9JHF2, Q9JKW5, Q9JKW6, Q9JKW9, Q9JKX0, Q9JKX1	Gene names	Nkx1-2, Nkx1.1, Sax1
Domain Architecture
Description	NK1 transcription factor-related protein 2 (Homeobox protein SAX-1) (NKX-1.1).

BARX1_MOUSE
θ value	3.52202e-12 (rank : 34)	NC score	0.939438 (rank : 14)
Query Neighborhood Hits	431	Target Neighborhood Hits	324	Shared Neighborhood Hits	308
SwissProt Accessions	Q9ER42, O09066, P70159, Q9ERV2	Gene names	Barx1
Domain Architecture
Description	Homeobox protein BarH-like 1.

BARX2_HUMAN
θ value	3.52202e-12 (rank : 35)	NC score	0.936465 (rank : 19)
Query Neighborhood Hits	431	Target Neighborhood Hits	387	Shared Neighborhood Hits	317
SwissProt Accessions	Q9UMQ3, O43518	Gene names	BARX2
Domain Architecture
Description	Homeobox protein BarH-like 2.

DLX6_HUMAN
θ value	3.52202e-12 (rank : 36)	NC score	0.931463 (rank : 22)
Query Neighborhood Hits	431	Target Neighborhood Hits	341	Shared Neighborhood Hits	322
SwissProt Accessions	P56179, Q3ZAR6, Q9UPL2	Gene names	DLX6
Domain Architecture
Description	Homeobox protein DLX-6.

MSX1_HUMAN
θ value	3.52202e-12 (rank : 37)	NC score	0.926632 (rank : 34)
Query Neighborhood Hits	431	Target Neighborhood Hits	374	Shared Neighborhood Hits	313
SwissProt Accessions	P28360, Q96NY4	Gene names	MSX1, HOX7
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7).

MSX2_MOUSE
θ value	3.52202e-12 (rank : 38)	NC score	0.922284 (rank : 50)
Query Neighborhood Hits	431	Target Neighborhood Hits	345	Shared Neighborhood Hits	311
SwissProt Accessions	Q03358, Q63856	Gene names	Msx2, Hox-8.1, Msx-2
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8.1).

NKX31_HUMAN
θ value	4.59992e-12 (rank : 39)	NC score	0.936554 (rank : 18)
Query Neighborhood Hits	431	Target Neighborhood Hits	331	Shared Neighborhood Hits	307
SwissProt Accessions	Q99801, O15465, Q9H2P4, Q9H2P5, Q9H2P6, Q9H2P7, Q9HBG0	Gene names	NKX3-1, NKX3.1, NKX3A
Domain Architecture
Description	Homeobox protein Nkx-3.1.

NKX31_MOUSE
θ value	6.00763e-12 (rank : 40)	NC score	0.930643 (rank : 24)
Query Neighborhood Hits	431	Target Neighborhood Hits	379	Shared Neighborhood Hits	309
SwissProt Accessions	P97436, O09087	Gene names	Nkx3-1, Nkx-3.1, Nkx3a
Domain Architecture
Description	Homeobox protein Nkx-3.1.

BARX2_MOUSE
θ value	7.84624e-12 (rank : 41)	NC score	0.939136 (rank : 16)
Query Neighborhood Hits	431	Target Neighborhood Hits	335	Shared Neighborhood Hits	313
SwissProt Accessions	O08686	Gene names	Barx2
Domain Architecture
Description	Homeobox protein BarH-like 2.

HXB8_HUMAN
θ value	7.84624e-12 (rank : 42)	NC score	0.874074 (rank : 156)
Query Neighborhood Hits	431	Target Neighborhood Hits	324	Shared Neighborhood Hits	313
SwissProt Accessions	P17481, Q9H1I2	Gene names	HOXB8, HOX2D
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2D) (Hox-2.4).

NKX25_MOUSE
θ value	7.84624e-12 (rank : 43)	NC score	0.916110 (rank : 62)
Query Neighborhood Hits	431	Target Neighborhood Hits	347	Shared Neighborhood Hits	320
SwissProt Accessions	P42582, P97335	Gene names	Nkx2-5, Csx, Nkx-2.5, Nkx2e
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

VAX2_HUMAN
θ value	7.84624e-12 (rank : 44)	NC score	0.922328 (rank : 49)
Query Neighborhood Hits	431	Target Neighborhood Hits	337	Shared Neighborhood Hits	312
SwissProt Accessions	Q9UIW0	Gene names	VAX2
Domain Architecture
Description	Ventral anterior homeobox 2.

VAX2_MOUSE
θ value	7.84624e-12 (rank : 45)	NC score	0.921860 (rank : 51)
Query Neighborhood Hits	431	Target Neighborhood Hits	338	Shared Neighborhood Hits	311
SwissProt Accessions	Q9WTP9	Gene names	Vax2, Vex
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 2 (Ventral retina homeodomain protein).

IPF1_MOUSE
θ value	1.33837e-11 (rank : 46)	NC score	0.915391 (rank : 64)
Query Neighborhood Hits	431	Target Neighborhood Hits	340	Shared Neighborhood Hits	315
SwissProt Accessions	P52946	Gene names	Ipf1, Pdx1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox 1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Pancreas/duodenum homeobox 1).

DLX3_HUMAN
θ value	1.74796e-11 (rank : 47)	NC score	0.918439 (rank : 58)
Query Neighborhood Hits	431	Target Neighborhood Hits	369	Shared Neighborhood Hits	327
SwissProt Accessions	O60479	Gene names	DLX3
Domain Architecture
Description	Homeobox protein DLX-3.

DLX3_MOUSE
θ value	1.74796e-11 (rank : 48)	NC score	0.918986 (rank : 56)
Query Neighborhood Hits	431	Target Neighborhood Hits	367	Shared Neighborhood Hits	326
SwissProt Accessions	Q64205	Gene names	Dlx3
Domain Architecture
Description	Homeobox protein DLX-3.

DLX5_HUMAN
θ value	1.74796e-11 (rank : 49)	NC score	0.911954 (rank : 70)
Query Neighborhood Hits	431	Target Neighborhood Hits	405	Shared Neighborhood Hits	327
SwissProt Accessions	P56178, Q9UPL1	Gene names	DLX5
Domain Architecture
Description	Homeobox protein DLX-5.

DLX5_MOUSE
θ value	1.74796e-11 (rank : 50)	NC score	0.910216 (rank : 71)
Query Neighborhood Hits	431	Target Neighborhood Hits	434	Shared Neighborhood Hits	330
SwissProt Accessions	P70396, O54876, O54877, O54878, Q9JJ45	Gene names	Dlx5
Domain Architecture
Description	Homeobox protein DLX-5.

GBX2_HUMAN
θ value	1.74796e-11 (rank : 51)	NC score	0.923888 (rank : 43)
Query Neighborhood Hits	431	Target Neighborhood Hits	322	Shared Neighborhood Hits	302
SwissProt Accessions	P52951, O43833, Q53RX5, Q9Y5Y1	Gene names	GBX2
Domain Architecture
Description	Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2).

GBX2_MOUSE
θ value	1.74796e-11 (rank : 52)	NC score	0.924032 (rank : 42)
Query Neighborhood Hits	431	Target Neighborhood Hits	326	Shared Neighborhood Hits	301
SwissProt Accessions	P48031	Gene names	Gbx2, Mmoxa, Stra7
Domain Architecture
Description	Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2) (Homeobox protein STRA7).

MSX3_MOUSE
θ value	1.74796e-11 (rank : 53)	NC score	0.934674 (rank : 20)
Query Neighborhood Hits	431	Target Neighborhood Hits	330	Shared Neighborhood Hits	311
SwissProt Accessions	P70354, P70246, Q03360, Q80W10	Gene names	Msx3, Msx-3
Domain Architecture
Description	Homeobox protein MSX-3.

BARX1_HUMAN
θ value	2.28291e-11 (rank : 54)	NC score	0.939449 (rank : 13)
Query Neighborhood Hits	431	Target Neighborhood Hits	326	Shared Neighborhood Hits	308
SwissProt Accessions	Q9HBU1	Gene names	BARX1
Domain Architecture
Description	Homeobox protein BarH-like 1.

HXC4_HUMAN
θ value	2.28291e-11 (rank : 55)	NC score	0.890537 (rank : 115)
Query Neighborhood Hits	431	Target Neighborhood Hits	361	Shared Neighborhood Hits	322
SwissProt Accessions	P09017	Gene names	HOXC4, HOX3E
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3E) (CP19).

HXC4_MOUSE
θ value	2.28291e-11 (rank : 56)	NC score	0.894670 (rank : 102)
Query Neighborhood Hits	431	Target Neighborhood Hits	365	Shared Neighborhood Hits	322
SwissProt Accessions	Q08624	Gene names	Hoxc4, Hox-3.5, Hoxc-4
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3.5).

GBX1_HUMAN
θ value	2.98157e-11 (rank : 57)	NC score	0.925811 (rank : 38)
Query Neighborhood Hits	431	Target Neighborhood Hits	334	Shared Neighborhood Hits	299
SwissProt Accessions	Q14549	Gene names	GBX1
Domain Architecture	No domain graphic available
Description	Homeobox protein GBX-1 (Gastrulation and brain-specific homeobox protein 1).

GBX1_MOUSE
θ value	2.98157e-11 (rank : 58)	NC score	0.924467 (rank : 39)
Query Neighborhood Hits	431	Target Neighborhood Hits	350	Shared Neighborhood Hits	303
SwissProt Accessions	P82976, Q8CGW5	Gene names	Gbx1
Domain Architecture	No domain graphic available
Description	Homeobox protein GBX-1 (Gastrulation and brain-specific homeobox protein 1).

MSX1_MOUSE
θ value	2.98157e-11 (rank : 59)	NC score	0.927117 (rank : 31)
Query Neighborhood Hits	431	Target Neighborhood Hits	322	Shared Neighborhood Hits	309
SwissProt Accessions	P13297	Gene names	Msx1, Hox7, Hox7.1
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7) (Hox- 7.1).

BSH_MOUSE
θ value	3.89403e-11 (rank : 60)	NC score	0.944684 (rank : 5)
Query Neighborhood Hits	431	Target Neighborhood Hits	349	Shared Neighborhood Hits	320
SwissProt Accessions	Q810B3	Gene names	Bsx
Domain Architecture	No domain graphic available
Description	Brain-specific homeobox protein homolog.

VAX1_HUMAN
θ value	3.89403e-11 (rank : 61)	NC score	0.919389 (rank : 54)
Query Neighborhood Hits	431	Target Neighborhood Hits	355	Shared Neighborhood Hits	319
SwissProt Accessions	Q5SQQ9, Q6ZSX0	Gene names	VAX1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

VAX1_MOUSE
θ value	3.89403e-11 (rank : 62)	NC score	0.919226 (rank : 55)
Query Neighborhood Hits	431	Target Neighborhood Hits	351	Shared Neighborhood Hits	317
SwissProt Accessions	Q2NKI2, O88880	Gene names	Vax1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

HXD8_HUMAN
θ value	5.08577e-11 (rank : 63)	NC score	0.873363 (rank : 161)
Query Neighborhood Hits	431	Target Neighborhood Hits	338	Shared Neighborhood Hits	315
SwissProt Accessions	P13378	Gene names	HOXD8, HOX4E
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4).

PHX2B_HUMAN
θ value	5.08577e-11 (rank : 64)	NC score	0.871745 (rank : 164)
Query Neighborhood Hits	431	Target Neighborhood Hits	407	Shared Neighborhood Hits	316
SwissProt Accessions	Q99453, Q6PJD9	Gene names	PHOX2B, PMX2B
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

PHX2B_MOUSE
θ value	5.08577e-11 (rank : 65)	NC score	0.871745 (rank : 165)
Query Neighborhood Hits	431	Target Neighborhood Hits	407	Shared Neighborhood Hits	316
SwissProt Accessions	O35690	Gene names	Phox2b, Pmx2b
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

BARH1_HUMAN
θ value	6.64225e-11 (rank : 66)	NC score	0.926774 (rank : 33)
Query Neighborhood Hits	431	Target Neighborhood Hits	373	Shared Neighborhood Hits	325
SwissProt Accessions	Q9BZE3, Q9NY88	Gene names	BARHL1
Domain Architecture
Description	BarH-like 1 homeobox protein.

BARH1_MOUSE
θ value	6.64225e-11 (rank : 67)	NC score	0.927514 (rank : 30)
Query Neighborhood Hits	431	Target Neighborhood Hits	350	Shared Neighborhood Hits	324
SwissProt Accessions	P63157, Q9JK26	Gene names	Barhl1, Bhx1, Mbh2
Domain Architecture	No domain graphic available
Description	BarH-like 1 homeobox protein (Bar-class homeodomain protein MBH2) (BarH-related homeobox protein 1).

HXB4_HUMAN
θ value	6.64225e-11 (rank : 68)	NC score	0.892298 (rank : 110)
Query Neighborhood Hits	431	Target Neighborhood Hits	376	Shared Neighborhood Hits	321
SwissProt Accessions	P17483, Q9NTA0	Gene names	HOXB4, HOX2F
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6).

HXB4_MOUSE
θ value	6.64225e-11 (rank : 69)	NC score	0.889725 (rank : 118)
Query Neighborhood Hits	431	Target Neighborhood Hits	375	Shared Neighborhood Hits	320
SwissProt Accessions	P10284, Q3UZB4, Q4VBG0	Gene names	Hoxb4, Hox-2.6, Hoxb-4
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2.6).

NKX23_HUMAN
θ value	6.64225e-11 (rank : 70)	NC score	0.915507 (rank : 63)
Query Neighborhood Hits	431	Target Neighborhood Hits	346	Shared Neighborhood Hits	323
SwissProt Accessions	Q8TAU0, Q9NYS6	Gene names	NKX2-3, NKX23, NKX2C
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NKX-2.3) (Homeobox protein NK-2 homolog C).

NKX23_MOUSE
θ value	6.64225e-11 (rank : 71)	NC score	0.914377 (rank : 66)
Query Neighborhood Hits	431	Target Neighborhood Hits	340	Shared Neighborhood Hits	319
SwissProt Accessions	P97334, Q9QZ60, Q9WV67	Gene names	Nkx2-3, Nkx-2.3, Nkx2c
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NK-2 homolog C) (Nkx2-C) (Homeobox protein NK-2 homolog 3).

HXB7_MOUSE
θ value	8.67504e-11 (rank : 72)	NC score	0.889215 (rank : 119)
Query Neighborhood Hits	431	Target Neighborhood Hits	314	Shared Neighborhood Hits	304
SwissProt Accessions	P09024, Q3UW15	Gene names	Hoxb7, Hox-2.3, Hoxb-7
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (Homeobox protein MH-22B).

HXA2_HUMAN
θ value	1.133e-10 (rank : 73)	NC score	0.898132 (rank : 91)
Query Neighborhood Hits	431	Target Neighborhood Hits	370	Shared Neighborhood Hits	310
SwissProt Accessions	O43364	Gene names	HOXA2
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A2.

HXA2_MOUSE
θ value	1.133e-10 (rank : 74)	NC score	0.900551 (rank : 83)
Query Neighborhood Hits	431	Target Neighborhood Hits	338	Shared Neighborhood Hits	310
SwissProt Accessions	P31245, Q149U3, Q920T8	Gene names	Hoxa2, Hox-1.11, Hoxa-2
Domain Architecture
Description	Homeobox protein Hox-A2 (Hox-1.11) (Hox1.11).

HXA4_HUMAN
θ value	1.133e-10 (rank : 75)	NC score	0.894366 (rank : 104)
Query Neighborhood Hits	431	Target Neighborhood Hits	370	Shared Neighborhood Hits	318
SwissProt Accessions	Q00056, O43366	Gene names	HOXA4, HOX1D
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4).

HXA4_MOUSE
θ value	1.133e-10 (rank : 76)	NC score	0.893834 (rank : 105)
Query Neighborhood Hits	431	Target Neighborhood Hits	379	Shared Neighborhood Hits	312
SwissProt Accessions	P06798, Q61684, Q64388, Q8BPE6	Gene names	Hoxa4, Hox-1.4, Hoxa-4
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1.4) (Homeobox protein MH-3).

HXD4_HUMAN
θ value	1.133e-10 (rank : 77)	NC score	0.890592 (rank : 114)
Query Neighborhood Hits	431	Target Neighborhood Hits	337	Shared Neighborhood Hits	305
SwissProt Accessions	P09016, Q96AU0	Gene names	HOXD4, HOX4B
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4B) (Hox-5.1) (HHO.C13).

IPF1_HUMAN
θ value	1.133e-10 (rank : 78)	NC score	0.914219 (rank : 67)
Query Neighborhood Hits	431	Target Neighborhood Hits	330	Shared Neighborhood Hits	309
SwissProt Accessions	P52945, O60594	Gene names	IPF1, PDX1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Pancreas/duodenum homeobox 1) (PDX- 1) (Islet/duodenum homeobox-1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Insulin upstream factor 1) (IUF-1) (Glucose- sensitive factor) (GSF).

NKX25_HUMAN
θ value	1.133e-10 (rank : 79)	NC score	0.916656 (rank : 61)
Query Neighborhood Hits	431	Target Neighborhood Hits	338	Shared Neighborhood Hits	321
SwissProt Accessions	P52952	Gene names	NKX2-5, CSX, NKX2.5, NKX2E
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

TITF1_HUMAN
θ value	1.133e-10 (rank : 80)	NC score	0.898790 (rank : 88)
Query Neighborhood Hits	431	Target Neighborhood Hits	332	Shared Neighborhood Hits	313
SwissProt Accessions	P43699, O14954, O14955, Q9BRJ8	Gene names	TITF1, NKX2-1, NKX2A, TTF1
Domain Architecture
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1) (Homeobox protein NK-2 homolog A).

TITF1_MOUSE
θ value	1.133e-10 (rank : 81)	NC score	0.900500 (rank : 84)
Query Neighborhood Hits	431	Target Neighborhood Hits	335	Shared Neighborhood Hits	314
SwissProt Accessions	P50220	Gene names	Titf1, Nkx-2.1, Nkx2-1, Ttf1
Domain Architecture	No domain graphic available
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1).

BARH2_HUMAN
θ value	1.47974e-10 (rank : 82)	NC score	0.920622 (rank : 52)
Query Neighborhood Hits	431	Target Neighborhood Hits	419	Shared Neighborhood Hits	324
SwissProt Accessions	Q9NY43, Q7Z4N7	Gene names	BARHL2
Domain Architecture
Description	BarH-like 2 homeobox protein.

BARH2_MOUSE
θ value	1.47974e-10 (rank : 83)	NC score	0.922857 (rank : 47)
Query Neighborhood Hits	431	Target Neighborhood Hits	397	Shared Neighborhood Hits	326
SwissProt Accessions	Q8VIB5, Q66L43	Gene names	Barhl2, Barh1, Mbh1
Domain Architecture	No domain graphic available
Description	BarH-like 2 homeobox protein (Bar-class homeodomain protein MBH1) (Homeobox protein B-H1).

HXD4_MOUSE
θ value	1.47974e-10 (rank : 84)	NC score	0.888480 (rank : 122)
Query Neighborhood Hits	431	Target Neighborhood Hits	339	Shared Neighborhood Hits	301
SwissProt Accessions	P10628, P97451, Q3UXL6	Gene names	Hoxd4, Hox-4.2, Hoxd-4
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4.2) (Hox-5.1).

HXD8_MOUSE
θ value	1.47974e-10 (rank : 85)	NC score	0.872178 (rank : 163)
Query Neighborhood Hits	431	Target Neighborhood Hits	333	Shared Neighborhood Hits	312
SwissProt Accessions	P23463	Gene names	Hoxd8, Hox-4.3, Hoxd-8
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4).

RX_MOUSE
θ value	1.47974e-10 (rank : 86)	NC score	0.891452 (rank : 113)
Query Neighborhood Hits	431	Target Neighborhood Hits	429	Shared Neighborhood Hits	327
SwissProt Accessions	O35602, O08748	Gene names	Rax, Rx
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

DLX4_HUMAN
θ value	1.9326e-10 (rank : 87)	NC score	0.917095 (rank : 59)
Query Neighborhood Hits	431	Target Neighborhood Hits	350	Shared Neighborhood Hits	315
SwissProt Accessions	Q92988, O60480, Q13265, Q6PJK0, Q9HBE0	Gene names	DLX4, BP1, DLX7, DLX8
Domain Architecture	No domain graphic available
Description	Homeobox protein DLX-4 (DLX-7) (DLX-8) (Beta protein 1).

DLX4_MOUSE
θ value	1.9326e-10 (rank : 88)	NC score	0.917033 (rank : 60)
Query Neighborhood Hits	431	Target Neighborhood Hits	352	Shared Neighborhood Hits	313
SwissProt Accessions	P70436, Q3UM51, Q8R4I3	Gene names	Dlx4, Dlx7
Domain Architecture
Description	Homeobox protein DLX-4 (DLX-7).

HXB7_HUMAN
θ value	1.9326e-10 (rank : 89)	NC score	0.888632 (rank : 121)
Query Neighborhood Hits	431	Target Neighborhood Hits	311	Shared Neighborhood Hits	304
SwissProt Accessions	P09629, Q15957	Gene names	HOXB7, HOX2C
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2C) (HHO.C1).

PHX2A_MOUSE
θ value	2.52405e-10 (rank : 90)	NC score	0.884249 (rank : 133)
Query Neighborhood Hits	431	Target Neighborhood Hits	338	Shared Neighborhood Hits	312
SwissProt Accessions	Q62066	Gene names	Phox2a, Arix, Phox2, Pmx2, Pmx2a
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (PHOX2A homeodomain protein) (Aristaless homeobox protein homolog).

ALX4_HUMAN
θ value	5.62301e-10 (rank : 91)	NC score	0.870471 (rank : 166)
Query Neighborhood Hits	431	Target Neighborhood Hits	394	Shared Neighborhood Hits	325
SwissProt Accessions	Q9H161, Q96JN7, Q9H198, Q9HAY9	Gene names	ALX4, KIAA1788
Domain Architecture
Description	Homeobox protein aristaless-like 4.

ALX4_MOUSE
θ value	5.62301e-10 (rank : 92)	NC score	0.872377 (rank : 162)
Query Neighborhood Hits	431	Target Neighborhood Hits	369	Shared Neighborhood Hits	328
SwissProt Accessions	O35137	Gene names	Alx4
Domain Architecture
Description	Homeobox protein aristaless-like 4 (ALX-4).

HXB6_HUMAN
θ value	5.62301e-10 (rank : 93)	NC score	0.877182 (rank : 145)
Query Neighborhood Hits	431	Target Neighborhood Hits	307	Shared Neighborhood Hits	302
SwissProt Accessions	P17509, P09068, Q9HB11, Q9UGH2	Gene names	HOXB6, HOX2B
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2B) (Hox-2.2) (HU-2).

NKX26_MOUSE
θ value	5.62301e-10 (rank : 94)	NC score	0.919805 (rank : 53)
Query Neighborhood Hits	431	Target Neighborhood Hits	343	Shared Neighborhood Hits	317
SwissProt Accessions	P43688	Gene names	Nkx2-6, Nkx-2.6, Nkx2f
Domain Architecture
Description	Homeobox protein Nkx-2.6 (Homeobox protein NK-2 homolog F).

HXA6_HUMAN
θ value	7.34386e-10 (rank : 95)	NC score	0.873777 (rank : 160)
Query Neighborhood Hits	431	Target Neighborhood Hits	309	Shared Neighborhood Hits	303
SwissProt Accessions	P31267, Q9UPM0	Gene names	HOXA6, HOX1B
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A6 (Hox-1B).

HXA6_MOUSE
θ value	7.34386e-10 (rank : 96)	NC score	0.874045 (rank : 157)
Query Neighborhood Hits	431	Target Neighborhood Hits	304	Shared Neighborhood Hits	299
SwissProt Accessions	P09092, Q9JI98	Gene names	Hoxa6, Hox-1.2, Hoxa-6
Domain Architecture
Description	Homeobox protein Hox-A6 (Hox-1.2) (M5-4).

NKX24_HUMAN
θ value	9.59137e-10 (rank : 97)	NC score	0.896893 (rank : 97)
Query Neighborhood Hits	431	Target Neighborhood Hits	366	Shared Neighborhood Hits	317
SwissProt Accessions	Q9H2Z4	Gene names	NKX2-4, NKX2D
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

NKX24_MOUSE
θ value	9.59137e-10 (rank : 98)	NC score	0.899943 (rank : 85)
Query Neighborhood Hits	431	Target Neighborhood Hits	356	Shared Neighborhood Hits	313
SwissProt Accessions	Q9EQM3, Q9EQM4	Gene names	Nkx2-4, Nkx2d
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

PHX2A_HUMAN
θ value	9.59137e-10 (rank : 99)	NC score	0.885085 (rank : 131)
Query Neighborhood Hits	431	Target Neighborhood Hits	345	Shared Neighborhood Hits	311
SwissProt Accessions	O14813, Q8IVZ2	Gene names	PHOX2A, ARIX, PMX2A
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (Aristaless homeobox protein homolog) (ARIX1 homeodomain protein).

PRRX2_HUMAN
θ value	9.59137e-10 (rank : 100)	NC score	0.863732 (rank : 174)
Query Neighborhood Hits	431	Target Neighborhood Hits	348	Shared Neighborhood Hits	317
SwissProt Accessions	Q99811, Q9UIB3	Gene names	PRRX2, PMX2, PRX2
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Paired-related homeobox protein 2).

HXB6_MOUSE
θ value	1.25267e-09 (rank : 101)	NC score	0.877239 (rank : 144)
Query Neighborhood Hits	431	Target Neighborhood Hits	309	Shared Neighborhood Hits	302
SwissProt Accessions	P09023	Gene names	Hoxb6, Hox-2.2, Hoxb-6
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2.2) (Homeobox protein MH-22A).

LBX1_MOUSE
θ value	1.25267e-09 (rank : 102)	NC score	0.926436 (rank : 35)
Query Neighborhood Hits	431	Target Neighborhood Hits	349	Shared Neighborhood Hits	317
SwissProt Accessions	P52955	Gene names	Lbx1, Lbx1h
Domain Architecture
Description	Transcription factor LBX1.

PRRX1_HUMAN
θ value	1.25267e-09 (rank : 103)	NC score	0.853941 (rank : 186)
Query Neighborhood Hits	431	Target Neighborhood Hits	347	Shared Neighborhood Hits	318
SwissProt Accessions	P54821, O60807	Gene names	PRRX1, PMX1
Domain Architecture
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein PHOX1).

PRRX1_MOUSE
θ value	1.25267e-09 (rank : 104)	NC score	0.854017 (rank : 185)
Query Neighborhood Hits	431	Target Neighborhood Hits	346	Shared Neighborhood Hits	318
SwissProt Accessions	P63013, P43271, Q02810	Gene names	Prrx1, Pmx, Pmx1
Domain Architecture	No domain graphic available
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein mHox) (Homeobox protein K-2).

GSC_HUMAN
θ value	1.63604e-09 (rank : 105)	NC score	0.879762 (rank : 138)
Query Neighborhood Hits	431	Target Neighborhood Hits	369	Shared Neighborhood Hits	327
SwissProt Accessions	P56915, Q86YR1	Gene names	GSC
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid.

HXC6_HUMAN
θ value	1.63604e-09 (rank : 106)	NC score	0.881222 (rank : 136)
Query Neighborhood Hits	431	Target Neighborhood Hits	306	Shared Neighborhood Hits	299
SwissProt Accessions	P09630	Gene names	HOXC6, HOX3C
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3C) (HHO.C8) (CP25).

HXC6_MOUSE
θ value	1.63604e-09 (rank : 107)	NC score	0.881222 (rank : 137)
Query Neighborhood Hits	431	Target Neighborhood Hits	306	Shared Neighborhood Hits	299
SwissProt Accessions	P10629, Q61683	Gene names	Hoxc6, Hox-3.3, Hoxc-6
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3.3) (Hox-6.1).

PRRXL_MOUSE
θ value	1.63604e-09 (rank : 108)	NC score	0.875007 (rank : 149)
Query Neighborhood Hits	431	Target Neighborhood Hits	350	Shared Neighborhood Hits	321
SwissProt Accessions	Q8BYH0, Q8K3F8	Gene names	Prrxl1, Drg11
Domain Architecture	No domain graphic available
Description	Paired-related homeobox protein-like 1 (Dorsal root ganglion 11) (Homeobox protein DRG11).

ARX_HUMAN
θ value	2.13673e-09 (rank : 109)	NC score	0.890002 (rank : 117)
Query Neighborhood Hits	431	Target Neighborhood Hits	401	Shared Neighborhood Hits	319
SwissProt Accessions	Q96QS3	Gene names	ARX
Domain Architecture
Description	Homeobox protein ARX (Aristaless-related homeobox).

ARX_MOUSE
θ value	2.13673e-09 (rank : 110)	NC score	0.887638 (rank : 123)
Query Neighborhood Hits	431	Target Neighborhood Hits	398	Shared Neighborhood Hits	317
SwissProt Accessions	O35085, Q9QYT4	Gene names	Arx
Domain Architecture
Description	Homeobox protein ARX (Aristaless-related homeobox).

NKX22_HUMAN
θ value	2.13673e-09 (rank : 111)	NC score	0.897756 (rank : 94)
Query Neighborhood Hits	431	Target Neighborhood Hits	342	Shared Neighborhood Hits	318
SwissProt Accessions	O95096	Gene names	NKX2-2, NKX2.2, NKX2B
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

NKX22_MOUSE
θ value	2.13673e-09 (rank : 112)	NC score	0.897066 (rank : 95)
Query Neighborhood Hits	431	Target Neighborhood Hits	336	Shared Neighborhood Hits	316
SwissProt Accessions	P42586	Gene names	Nkx2-2, Nkx-2.2, Nkx2b
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

PRRX2_MOUSE
θ value	2.13673e-09 (rank : 113)	NC score	0.858566 (rank : 181)
Query Neighborhood Hits	431	Target Neighborhood Hits	351	Shared Neighborhood Hits	319
SwissProt Accessions	Q06348, Q61651	Gene names	Prrx2, Prx2, S8
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Homeobox protein S8).

ALX3_HUMAN
θ value	2.79066e-09 (rank : 114)	NC score	0.859513 (rank : 179)
Query Neighborhood Hits	431	Target Neighborhood Hits	380	Shared Neighborhood Hits	328
SwissProt Accessions	O95076, O95075	Gene names	ALX3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

GSC_MOUSE
θ value	2.79066e-09 (rank : 115)	NC score	0.879440 (rank : 139)
Query Neighborhood Hits	431	Target Neighborhood Hits	368	Shared Neighborhood Hits	324
SwissProt Accessions	Q02591	Gene names	Gsc
Domain Architecture
Description	Homeobox protein goosecoid.

NKX28_HUMAN
θ value	2.79066e-09 (rank : 116)	NC score	0.918473 (rank : 57)
Query Neighborhood Hits	431	Target Neighborhood Hits	352	Shared Neighborhood Hits	325
SwissProt Accessions	O15522	Gene names	NKX2-8, NKX-2.8, NKX2G, NKX2H
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H).

ALX3_MOUSE
θ value	3.64472e-09 (rank : 117)	NC score	0.861020 (rank : 178)
Query Neighborhood Hits	431	Target Neighborhood Hits	386	Shared Neighborhood Hits	327
SwissProt Accessions	O70137	Gene names	Alx3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

MEOX2_HUMAN
θ value	3.64472e-09 (rank : 118)	NC score	0.912847 (rank : 69)
Query Neighborhood Hits	431	Target Neighborhood Hits	340	Shared Neighborhood Hits	313
SwissProt Accessions	P50222, O75263, Q9UPL6	Gene names	MEOX2, GAX, MOX2
Domain Architecture
Description	Homeobox protein MOX-2 (Mesenchyme homeobox 2) (Growth arrest-specific homeobox).

MEOX2_MOUSE
θ value	3.64472e-09 (rank : 119)	NC score	0.913017 (rank : 68)
Query Neighborhood Hits	431	Target Neighborhood Hits	341	Shared Neighborhood Hits	313
SwissProt Accessions	P32443, Q544T6	Gene names	Meox2, Gax, Mox-2, Mox2
Domain Architecture
Description	Homeobox protein MOX-2 (Mesenchyme homeobox 2).

PAX7_HUMAN
θ value	3.64472e-09 (rank : 120)	NC score	0.770839 (rank : 231)
Query Neighborhood Hits	431	Target Neighborhood Hits	456	Shared Neighborhood Hits	332
SwissProt Accessions	P23759	Gene names	PAX7, HUP1
Domain Architecture
Description	Paired box protein Pax-7 (HUP1).

PAX7_MOUSE
θ value	3.64472e-09 (rank : 121)	NC score	0.770039 (rank : 232)
Query Neighborhood Hits	431	Target Neighborhood Hits	422	Shared Neighborhood Hits	330
SwissProt Accessions	P47239, Q9ES16	Gene names	Pax7, Pax-7
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-7.

LBX1_HUMAN
θ value	4.76016e-09 (rank : 122)	NC score	0.924173 (rank : 40)
Query Neighborhood Hits	431	Target Neighborhood Hits	357	Shared Neighborhood Hits	319
SwissProt Accessions	P52954	Gene names	LBX1
Domain Architecture
Description	Transcription factor LBX1.

HXD12_MOUSE
θ value	6.21693e-09 (rank : 123)	NC score	0.865920 (rank : 170)
Query Neighborhood Hits	431	Target Neighborhood Hits	370	Shared Neighborhood Hits	310
SwissProt Accessions	P23812	Gene names	Hoxd12, Hox-4.7, Hoxd-12
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4.7) (Hox-5.6).

PITX3_HUMAN
θ value	6.21693e-09 (rank : 124)	NC score	0.882463 (rank : 135)
Query Neighborhood Hits	431	Target Neighborhood Hits	366	Shared Neighborhood Hits	324
SwissProt Accessions	O75364	Gene names	PITX3, PTX3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

PITX3_MOUSE
θ value	6.21693e-09 (rank : 125)	NC score	0.882863 (rank : 134)
Query Neighborhood Hits	431	Target Neighborhood Hits	380	Shared Neighborhood Hits	325
SwissProt Accessions	O35160	Gene names	Pitx3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

RX_HUMAN
θ value	6.21693e-09 (rank : 126)	NC score	0.893012 (rank : 106)
Query Neighborhood Hits	431	Target Neighborhood Hits	423	Shared Neighborhood Hits	333
SwissProt Accessions	Q9Y2V3	Gene names	RAX, RX
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

CART1_HUMAN
θ value	8.11959e-09 (rank : 127)	NC score	0.861311 (rank : 176)
Query Neighborhood Hits	431	Target Neighborhood Hits	348	Shared Neighborhood Hits	321
SwissProt Accessions	Q15699, Q546C8, Q96FH4	Gene names	CART1
Domain Architecture
Description	Cartilage homeoprotein 1 (CART-1).

CART1_MOUSE
θ value	8.11959e-09 (rank : 128)	NC score	0.861080 (rank : 177)
Query Neighborhood Hits	431	Target Neighborhood Hits	344	Shared Neighborhood Hits	320
SwissProt Accessions	Q8C8B0, Q8C370	Gene names	Cart1
Domain Architecture	No domain graphic available
Description	Cartilage homeoprotein 1 (CART-1).

HXD3_HUMAN
θ value	8.11959e-09 (rank : 129)	NC score	0.887113 (rank : 126)
Query Neighborhood Hits	431	Target Neighborhood Hits	433	Shared Neighborhood Hits	321
SwissProt Accessions	P31249, Q99955, Q9BSC5	Gene names	HOXD3, HOX4A
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4A).

HXD3_MOUSE
θ value	8.11959e-09 (rank : 130)	NC score	0.887490 (rank : 124)
Query Neighborhood Hits	431	Target Neighborhood Hits	435	Shared Neighborhood Hits	320
SwissProt Accessions	P09027, Q3UUD3	Gene names	Hoxd3, Hox-4.1, Hoxd-3
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4.1) (Homeobox protein MH-19).

NKX28_MOUSE
θ value	8.11959e-09 (rank : 131)	NC score	0.914532 (rank : 65)
Query Neighborhood Hits	431	Target Neighborhood Hits	347	Shared Neighborhood Hits	323
SwissProt Accessions	O70584	Gene names	Nkx2-8, Nkx-2.9, Nkx2-9, Nkx2h
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H) (Homeobox protein Nkx-2.9).

HME1_HUMAN
θ value	1.06045e-08 (rank : 132)	NC score	0.898200 (rank : 90)
Query Neighborhood Hits	431	Target Neighborhood Hits	384	Shared Neighborhood Hits	324
SwissProt Accessions	Q05925	Gene names	EN1
Domain Architecture
Description	Homeobox protein engrailed-1 (Hu-En-1).

HME1_MOUSE
θ value	1.06045e-08 (rank : 133)	NC score	0.897892 (rank : 93)
Query Neighborhood Hits	431	Target Neighborhood Hits	397	Shared Neighborhood Hits	325
SwissProt Accessions	P09065	Gene names	En1, En-1
Domain Architecture
Description	Homeobox protein engrailed-1 (Mo-En-1).

PAX3_HUMAN
θ value	1.06045e-08 (rank : 134)	NC score	0.763736 (rank : 234)
Query Neighborhood Hits	431	Target Neighborhood Hits	513	Shared Neighborhood Hits	323
SwissProt Accessions	P23760, Q16448	Gene names	PAX3, HUP2
Domain Architecture
Description	Paired box protein Pax-3 (HUP2).

PAX3_MOUSE
θ value	1.06045e-08 (rank : 135)	NC score	0.764818 (rank : 233)
Query Neighborhood Hits	431	Target Neighborhood Hits	478	Shared Neighborhood Hits	324
SwissProt Accessions	P24610, Q3UFQ9, Q8BRE7, Q9CXI6	Gene names	Pax3, Pax-3
Domain Architecture
Description	Paired box protein Pax-3.

OTP_MOUSE
θ value	1.38499e-08 (rank : 136)	NC score	0.885292 (rank : 130)
Query Neighborhood Hits	431	Target Neighborhood Hits	387	Shared Neighborhood Hits	325
SwissProt Accessions	O09113	Gene names	Otp
Domain Architecture
Description	Homeobox protein orthopedia.

PAX6_HUMAN
θ value	1.38499e-08 (rank : 137)	NC score	0.757595 (rank : 235)
Query Neighborhood Hits	431	Target Neighborhood Hits	383	Shared Neighborhood Hits	316
SwissProt Accessions	P26367, Q6N006, Q99413	Gene names	PAX6, AN2
Domain Architecture
Description	Paired box protein Pax-6 (Oculorhombin) (Aniridia type II protein).

PAX6_MOUSE
θ value	1.38499e-08 (rank : 138)	NC score	0.757595 (rank : 236)
Query Neighborhood Hits	431	Target Neighborhood Hits	383	Shared Neighborhood Hits	316
SwissProt Accessions	P63015, P32117, P70601, Q62222, Q64037, Q8CEI5, Q8VDB5, Q921Q8	Gene names	Pax6, Pax-6, Sey
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-6 (Oculorhombin).

HXA3_HUMAN
θ value	1.80886e-08 (rank : 139)	NC score	0.886196 (rank : 128)
Query Neighborhood Hits	431	Target Neighborhood Hits	535	Shared Neighborhood Hits	339
SwissProt Accessions	O43365	Gene names	HOXA3, HOX1E
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1E).

HXA3_MOUSE
θ value	1.80886e-08 (rank : 140)	NC score	0.885921 (rank : 129)
Query Neighborhood Hits	431	Target Neighborhood Hits	558	Shared Neighborhood Hits	342
SwissProt Accessions	P02831, Q4V9Z8, Q61197	Gene names	Hoxa3, Hox-1.5, Hoxa-3
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1.5) (MO-10).

HXB5_HUMAN
θ value	1.80886e-08 (rank : 141)	NC score	0.877660 (rank : 141)
Query Neighborhood Hits	431	Target Neighborhood Hits	332	Shared Neighborhood Hits	306
SwissProt Accessions	P09067, P09069	Gene names	HOXB5, HOX2A
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2A) (HHO.C10) (HU-1).

HXB5_MOUSE
θ value	1.80886e-08 (rank : 142)	NC score	0.876995 (rank : 146)
Query Neighborhood Hits	431	Target Neighborhood Hits	337	Shared Neighborhood Hits	307
SwissProt Accessions	P09079, Q3ZAY8	Gene names	Hoxb5, Hox-2.1, Hoxb-5
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2.1) (MU-1) (H24.1).

GSHI_MOUSE
θ value	2.36244e-08 (rank : 143)	NC score	0.904442 (rank : 75)
Query Neighborhood Hits	431	Target Neighborhood Hits	313	Shared Neighborhood Hits	305
SwissProt Accessions	P31315	Gene names	Gsh1, Gsh-1
Domain Architecture
Description	Homeobox protein GSH-1.

HXB3_HUMAN
θ value	2.36244e-08 (rank : 144)	NC score	0.868335 (rank : 167)
Query Neighborhood Hits	431	Target Neighborhood Hits	559	Shared Neighborhood Hits	321
SwissProt Accessions	P14651, O95615, P17484	Gene names	HOXB3, HOX2G
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2G) (Hox-2.7).

HXB3_MOUSE
θ value	2.36244e-08 (rank : 145)	NC score	0.876365 (rank : 148)
Query Neighborhood Hits	431	Target Neighborhood Hits	493	Shared Neighborhood Hits	319
SwissProt Accessions	P09026, P10285, Q4PJ06, Q61680	Gene names	Hoxb3, Hox-2.7, Hoxb-3
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2.7) (Homeobox protein MH-23).

CDX1_HUMAN
θ value	3.08544e-08 (rank : 146)	NC score	0.901769 (rank : 79)
Query Neighborhood Hits	431	Target Neighborhood Hits	382	Shared Neighborhood Hits	317
SwissProt Accessions	P47902, Q4VAU4, Q9NYK8	Gene names	CDX1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

EVX1_HUMAN
θ value	3.08544e-08 (rank : 147)	NC score	0.894432 (rank : 103)
Query Neighborhood Hits	431	Target Neighborhood Hits	349	Shared Neighborhood Hits	310
SwissProt Accessions	P49640	Gene names	EVX1
Domain Architecture
Description	Homeobox even-skipped homolog protein 1 (EVX-1).

EVX1_MOUSE
θ value	3.08544e-08 (rank : 148)	NC score	0.898128 (rank : 92)
Query Neighborhood Hits	431	Target Neighborhood Hits	350	Shared Neighborhood Hits	312
SwissProt Accessions	P23683	Gene names	Evx1
Domain Architecture
Description	Homeobox even-skipped homolog protein 1 (EVX-1).

HXA1_MOUSE
θ value	3.08544e-08 (rank : 149)	NC score	0.901007 (rank : 81)
Query Neighborhood Hits	431	Target Neighborhood Hits	341	Shared Neighborhood Hits	318
SwissProt Accessions	P09022, P15463	Gene names	Hoxa1, Era-1, Hox-1.6, Hoxa-1
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein ERA-1-399).

HXB2_HUMAN
θ value	3.08544e-08 (rank : 150)	NC score	0.892298 (rank : 111)
Query Neighborhood Hits	431	Target Neighborhood Hits	367	Shared Neighborhood Hits	315
SwissProt Accessions	P14652, P10913, P17485	Gene names	HOXB2, HOX2H
Domain Architecture
Description	Homeobox protein Hox-B2 (Hox-2H) (Hox-2.8) (K8).

HXB2_MOUSE
θ value	3.08544e-08 (rank : 151)	NC score	0.899500 (rank : 87)
Query Neighborhood Hits	431	Target Neighborhood Hits	350	Shared Neighborhood Hits	312
SwissProt Accessions	P0C1T1	Gene names	Hoxb2, Hox-2.8
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-B2 (Hox-2.8).

PITX2_HUMAN
θ value	3.08544e-08 (rank : 152)	NC score	0.873871 (rank : 159)
Query Neighborhood Hits	431	Target Neighborhood Hits	381	Shared Neighborhood Hits	327
SwissProt Accessions	Q99697, O60578, O60579, O60580, Q9BY17	Gene names	PITX2, ARP1, RGS, RIEG, RIEG1
Domain Architecture
Description	Pituitary homeobox 2 (RIEG bicoid-related homeobox transcription factor) (Solurshin) (ALL1-responsive protein ARP1).

PITX2_MOUSE
θ value	3.08544e-08 (rank : 153)	NC score	0.874023 (rank : 158)
Query Neighborhood Hits	431	Target Neighborhood Hits	383	Shared Neighborhood Hits	326
SwissProt Accessions	P97474, O08646, O70336, P97933, Q9JLA0, Q9QXB8, Q9R1V9, Q9Z141	Gene names	Pitx2, Arp1, Brx1, Otlx2, Ptx2, Rgs
Domain Architecture
Description	Pituitary homeobox 2 (Orthodenticle-like homeobox 2) (Solurshin) (ALL1-responsive protein ARP1) (BRX1 homeoprotein) (Paired-like homeodomain transcription factor Munc 30).

HXC5_HUMAN
θ value	4.0297e-08 (rank : 154)	NC score	0.877239 (rank : 143)
Query Neighborhood Hits	431	Target Neighborhood Hits	316	Shared Neighborhood Hits	299
SwissProt Accessions	Q00444	Gene names	HOXC5, HOX3D
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3D) (CP11).

HXC5_MOUSE
θ value	4.0297e-08 (rank : 155)	NC score	0.876678 (rank : 147)
Query Neighborhood Hits	431	Target Neighborhood Hits	316	Shared Neighborhood Hits	298
SwissProt Accessions	P32043, Q8BJW4	Gene names	Hoxc5, Hox-3.4, Hoxc-5
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3.4) (Hox-6.2).

HXA1_HUMAN
θ value	5.26297e-08 (rank : 156)	NC score	0.899758 (rank : 86)
Query Neighborhood Hits	431	Target Neighborhood Hits	334	Shared Neighborhood Hits	315
SwissProt Accessions	P49639, O43363	Gene names	HOXA1, HOX1F
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1F).

CDX1_MOUSE
θ value	6.87365e-08 (rank : 157)	NC score	0.900607 (rank : 82)
Query Neighborhood Hits	431	Target Neighborhood Hits	379	Shared Neighborhood Hits	314
SwissProt Accessions	P18111, Q8VCF7	Gene names	Cdx1, Cdx-1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

HXA5_HUMAN
θ value	6.87365e-08 (rank : 158)	NC score	0.877641 (rank : 142)
Query Neighborhood Hits	431	Target Neighborhood Hits	336	Shared Neighborhood Hits	306
SwissProt Accessions	P20719, O43367, Q96CY6	Gene names	HOXA5, HOX1C
Domain Architecture
Description	Homeobox protein Hox-A5 (Hox-1C).

HXA5_MOUSE
θ value	6.87365e-08 (rank : 159)	NC score	0.877795 (rank : 140)
Query Neighborhood Hits	431	Target Neighborhood Hits	338	Shared Neighborhood Hits	304
SwissProt Accessions	P09021, Q91VQ5	Gene names	Hoxa5, Hox-1.3, Hoxa-5
Domain Architecture
Description	Homeobox protein Hox-A5 (Hox-1.3) (M2).

PITX1_HUMAN
θ value	6.87365e-08 (rank : 160)	NC score	0.874129 (rank : 155)
Query Neighborhood Hits	431	Target Neighborhood Hits	353	Shared Neighborhood Hits	324
SwissProt Accessions	P78337, O14677, O60425, Q9BTI5	Gene names	PITX1, BFT, PTX1
Domain Architecture
Description	Pituitary homeobox 1 (Hindlimb expressed homeobox protein backfoot).

PITX1_MOUSE
θ value	6.87365e-08 (rank : 161)	NC score	0.874196 (rank : 154)
Query Neighborhood Hits	431	Target Neighborhood Hits	362	Shared Neighborhood Hits	327
SwissProt Accessions	P70314, O54742, P70427	Gene names	Pitx1, Bft, Potx, Ptx1
Domain Architecture
Description	Pituitary homeobox 1 (Homeobox protein P-OTX) (Pituitary OTX-related factor) (Hindlimb expressed homeobox protein backfoot) (Ptx1).

VSX1_MOUSE
θ value	6.87365e-08 (rank : 162)	NC score	0.837223 (rank : 202)
Query Neighborhood Hits	431	Target Neighborhood Hits	356	Shared Neighborhood Hits	303
SwissProt Accessions	Q91V10	Gene names	Vsx1, Rinx
Domain Architecture
Description	Visual system homeobox 1 (Transcription factor VSX1) (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX).

GSH2_MOUSE
θ value	8.97725e-08 (rank : 163)	NC score	0.904499 (rank : 74)
Query Neighborhood Hits	431	Target Neighborhood Hits	319	Shared Neighborhood Hits	306
SwissProt Accessions	P31316	Gene names	Gsh2, Gsh-2
Domain Architecture
Description	Homeobox protein GSH-2.

PAX4_HUMAN
θ value	8.97725e-08 (rank : 164)	NC score	0.776081 (rank : 228)
Query Neighborhood Hits	431	Target Neighborhood Hits	367	Shared Neighborhood Hits	325
SwissProt Accessions	O43316, O95161, Q6B0H0	Gene names	PAX4
Domain Architecture
Description	Paired box protein Pax-4.

HME2_HUMAN
θ value	1.17247e-07 (rank : 165)	NC score	0.898575 (rank : 89)
Query Neighborhood Hits	431	Target Neighborhood Hits	355	Shared Neighborhood Hits	321
SwissProt Accessions	P19622	Gene names	EN2
Domain Architecture
Description	Homeobox protein engrailed-2 (Hu-En-2).

HME2_MOUSE
θ value	1.17247e-07 (rank : 166)	NC score	0.897016 (rank : 96)
Query Neighborhood Hits	431	Target Neighborhood Hits	352	Shared Neighborhood Hits	321
SwissProt Accessions	P09066	Gene names	En2, En-2
Domain Architecture
Description	Homeobox protein engrailed-2 (Mo-En-2).

SHOX_HUMAN
θ value	1.17247e-07 (rank : 167)	NC score	0.866281 (rank : 169)
Query Neighborhood Hits	431	Target Neighborhood Hits	363	Shared Neighborhood Hits	314
SwissProt Accessions	O15266, O00412, O00413, O15267	Gene names	SHOX, PHOG
Domain Architecture
Description	Short stature homeobox protein (Short stature homeobox-containing protein) (Pseudoautosomal homeobox-containing osteogenic protein).

CDX2_HUMAN
θ value	1.53129e-07 (rank : 168)	NC score	0.892191 (rank : 112)
Query Neighborhood Hits	431	Target Neighborhood Hits	330	Shared Neighborhood Hits	305
SwissProt Accessions	Q99626, O00503, Q969L8	Gene names	CDX2, CDX3
Domain Architecture
Description	Homeobox protein CDX-2 (Caudal-type homeobox protein 2) (CDX-3).

GSH2_HUMAN
θ value	1.53129e-07 (rank : 169)	NC score	0.905054 (rank : 73)
Query Neighborhood Hits	431	Target Neighborhood Hits	324	Shared Neighborhood Hits	308
SwissProt Accessions	Q9BZM3	Gene names	GSH2
Domain Architecture
Description	Homeobox protein GSH-2.

HXD1_MOUSE
θ value	1.53129e-07 (rank : 170)	NC score	0.895351 (rank : 100)
Query Neighborhood Hits	431	Target Neighborhood Hits	381	Shared Neighborhood Hits	319
SwissProt Accessions	Q01822	Gene names	Hoxd1, Hox-4.9, Hoxd-1
Domain Architecture
Description	Homeobox protein Hox-D1 (Hox-4.9).

GSHI_HUMAN
θ value	1.99992e-07 (rank : 171)	NC score	0.903084 (rank : 77)
Query Neighborhood Hits	431	Target Neighborhood Hits	314	Shared Neighborhood Hits	307
SwissProt Accessions	Q9H4S2	Gene names	GSH1
Domain Architecture
Description	Homeobox protein GSH-1.

HXB1_HUMAN
θ value	1.99992e-07 (rank : 172)	NC score	0.901095 (rank : 80)
Query Neighborhood Hits	431	Target Neighborhood Hits	356	Shared Neighborhood Hits	318
SwissProt Accessions	P14653	Gene names	HOXB1, HOX2I
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2I).

MEOX1_MOUSE
θ value	1.99992e-07 (rank : 173)	NC score	0.905954 (rank : 72)
Query Neighborhood Hits	431	Target Neighborhood Hits	345	Shared Neighborhood Hits	316
SwissProt Accessions	P32442	Gene names	Meox1, Mox-1, Mox1
Domain Architecture
Description	Homeobox protein MOX-1 (Mesenchyme homeobox 1).

VSX1_HUMAN
θ value	1.99992e-07 (rank : 174)	NC score	0.836634 (rank : 205)
Query Neighborhood Hits	431	Target Neighborhood Hits	344	Shared Neighborhood Hits	309
SwissProt Accessions	Q9NZR4, Q5TF40, Q5TF41, Q9HCU3, Q9NU27	Gene names	VSX1, RINX
Domain Architecture
Description	Visual system homeobox 1 (Transcription factor VSX1) (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX).

HXB1_MOUSE
θ value	2.61198e-07 (rank : 175)	NC score	0.902969 (rank : 78)
Query Neighborhood Hits	431	Target Neighborhood Hits	341	Shared Neighborhood Hits	319
SwissProt Accessions	P17919, Q3ZAY6, Q9CYH3	Gene names	Hoxb1, Hox-2.9, Hoxb-1
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2.9).

SHOX2_HUMAN
θ value	3.41135e-07 (rank : 176)	NC score	0.864133 (rank : 172)
Query Neighborhood Hits	431	Target Neighborhood Hits	353	Shared Neighborhood Hits	313
SwissProt Accessions	O60902, O60465, O60467, O60903	Gene names	SHOX2, OG12X, SHOT
Domain Architecture
Description	Short stature homeobox protein 2 (Paired-related homeobox protein SHOT) (Homeobox protein Og12X).

SHOX2_MOUSE
θ value	3.41135e-07 (rank : 177)	NC score	0.864798 (rank : 171)
Query Neighborhood Hits	431	Target Neighborhood Hits	348	Shared Neighborhood Hits	312
SwissProt Accessions	P70390, P70369	Gene names	Shox2, Og12x, Prx3
Domain Architecture
Description	Short stature homeobox protein 2 (Homeobox protein Og12X) (OG-12) (Paired family homeodomain protein Prx3).

ESX1L_HUMAN
θ value	4.45536e-07 (rank : 178)	NC score	0.884898 (rank : 132)
Query Neighborhood Hits	431	Target Neighborhood Hits	498	Shared Neighborhood Hits	325
SwissProt Accessions	Q8N693, Q7Z6K7	Gene names	ESX1L, ESX1R
Domain Architecture
Description	Extraembryonic, spermatogenesis, homeobox 1-like protein.

EVX2_HUMAN
θ value	4.45536e-07 (rank : 179)	NC score	0.895921 (rank : 99)
Query Neighborhood Hits	431	Target Neighborhood Hits	325	Shared Neighborhood Hits	304
SwissProt Accessions	Q03828	Gene names	EVX2
Domain Architecture
Description	Homeobox even-skipped homolog protein 2 (EVX-2).

EVX2_MOUSE
θ value	4.45536e-07 (rank : 180)	NC score	0.896396 (rank : 98)
Query Neighborhood Hits	431	Target Neighborhood Hits	327	Shared Neighborhood Hits	307
SwissProt Accessions	P49749	Gene names	Evx2, Evx-2
Domain Architecture
Description	Homeobox even-skipped homolog protein 2 (EVX-2).

HXD1_HUMAN
θ value	4.45536e-07 (rank : 181)	NC score	0.892884 (rank : 107)
Query Neighborhood Hits	431	Target Neighborhood Hits	337	Shared Neighborhood Hits	315
SwissProt Accessions	Q9GZZ0	Gene names	HOXD1
Domain Architecture
Description	Homeobox protein Hox-D1.

MEOX1_HUMAN
θ value	4.45536e-07 (rank : 182)	NC score	0.903400 (rank : 76)
Query Neighborhood Hits	431	Target Neighborhood Hits	342	Shared Neighborhood Hits	310
SwissProt Accessions	P50221	Gene names	MEOX1, MOX1
Domain Architecture
Description	Homeobox protein MOX-1 (Mesenchyme homeobox 1).

CDX2_MOUSE
θ value	5.81887e-07 (rank : 183)	NC score	0.895304 (rank : 101)
Query Neighborhood Hits	431	Target Neighborhood Hits	336	Shared Neighborhood Hits	307
SwissProt Accessions	P43241	Gene names	Cdx2, Cdx-2
Domain Architecture
Description	Homeobox protein CDX-2 (Caudal-type homeobox protein 2).

CDX4_HUMAN
θ value	5.81887e-07 (rank : 184)	NC score	0.892657 (rank : 108)
Query Neighborhood Hits	431	Target Neighborhood Hits	366	Shared Neighborhood Hits	314
SwissProt Accessions	O14627, Q5JS20	Gene names	CDX4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

CDX4_MOUSE
θ value	9.92553e-07 (rank : 185)	NC score	0.886488 (rank : 127)
Query Neighborhood Hits	431	Target Neighborhood Hits	378	Shared Neighborhood Hits	312
SwissProt Accessions	Q07424	Gene names	Cdx4, Cdx-4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

CHX10_HUMAN
θ value	9.92553e-07 (rank : 186)	NC score	0.843409 (rank : 192)
Query Neighborhood Hits	431	Target Neighborhood Hits	340	Shared Neighborhood Hits	308
SwissProt Accessions	P58304	Gene names	CHX10, VSX2
Domain Architecture
Description	Homeobox protein CHX10 (Ceh-10 homeodomain-containing homolog).

CHX10_MOUSE
θ value	9.92553e-07 (rank : 187)	NC score	0.843673 (rank : 190)
Query Neighborhood Hits	431	Target Neighborhood Hits	340	Shared Neighborhood Hits	307
SwissProt Accessions	Q61412	Gene names	Chx10, Vsx2
Domain Architecture
Description	Homeobox protein CHX10 (Ceh-10 homeodomain-containing homolog).

GSCL_MOUSE
θ value	9.92553e-07 (rank : 188)	NC score	0.858311 (rank : 182)
Query Neighborhood Hits	431	Target Neighborhood Hits	339	Shared Neighborhood Hits	315
SwissProt Accessions	P56916	Gene names	Gscl
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid-like (GSC-2).

GSCL_HUMAN
θ value	1.29631e-06 (rank : 189)	NC score	0.874707 (rank : 150)
Query Neighborhood Hits	431	Target Neighborhood Hits	343	Shared Neighborhood Hits	315
SwissProt Accessions	O15499	Gene names	GSCL
Domain Architecture
Description	Homeobox protein goosecoid-like (GSC-2).

PAX4_MOUSE
θ value	1.29631e-06 (rank : 190)	NC score	0.771988 (rank : 230)
Query Neighborhood Hits	431	Target Neighborhood Hits	370	Shared Neighborhood Hits	326
SwissProt Accessions	P32115, P97341, Q9QUR1, Q9R091	Gene names	Pax4, Pax-4
Domain Architecture
Description	Paired box protein Pax-4.

OTX1_HUMAN
θ value	2.88788e-06 (rank : 191)	NC score	0.841659 (rank : 196)
Query Neighborhood Hits	431	Target Neighborhood Hits	379	Shared Neighborhood Hits	323
SwissProt Accessions	P32242, Q53TG6	Gene names	OTX1
Domain Architecture
Description	Homeobox protein OTX1.

PEPP1_HUMAN
θ value	2.88788e-06 (rank : 192)	NC score	0.887368 (rank : 125)
Query Neighborhood Hits	431	Target Neighborhood Hits	338	Shared Neighborhood Hits	314
SwissProt Accessions	Q8NHV9, O95030, Q3SYE0	Gene names	PEPP1, OTEX
Domain Architecture
Description	Paired-like homeobox protein PEPP-1 (Ovary-, testis- and epididymis- expressed gene protein).

PEPP2_HUMAN
θ value	3.77169e-06 (rank : 193)	NC score	0.888774 (rank : 120)
Query Neighborhood Hits	431	Target Neighborhood Hits	316	Shared Neighborhood Hits	298
SwissProt Accessions	Q9BQY4, Q9BR00	Gene names	PEPP2, THG1
Domain Architecture
Description	Paired-like homeobox protein PEPP-2 (Testis homeobox gene 1).

OTX2_HUMAN
θ value	4.92598e-06 (rank : 194)	NC score	0.814482 (rank : 220)
Query Neighborhood Hits	431	Target Neighborhood Hits	341	Shared Neighborhood Hits	307
SwissProt Accessions	P32243, Q6GTV3, Q9HAW3, Q9P2R1	Gene names	OTX2
Domain Architecture
Description	Homeobox protein OTX2.

HXC10_HUMAN
θ value	6.43352e-06 (rank : 195)	NC score	0.836974 (rank : 203)
Query Neighborhood Hits	431	Target Neighborhood Hits	417	Shared Neighborhood Hits	314
SwissProt Accessions	Q9NYD6, O15219, O15220, Q9BVD5	Gene names	HOXC10
Domain Architecture
Description	Homeobox protein Hox-C10.

HXC10_MOUSE
θ value	6.43352e-06 (rank : 196)	NC score	0.836661 (rank : 204)
Query Neighborhood Hits	431	Target Neighborhood Hits	417	Shared Neighborhood Hits	312
SwissProt Accessions	P31257, P31312, Q7TMT7	Gene names	Hoxc10, Hox-3.6, Hoxc-10
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C10 (Hox-3.6).

OTX1_MOUSE
θ value	6.43352e-06 (rank : 197)	NC score	0.834615 (rank : 208)
Query Neighborhood Hits	431	Target Neighborhood Hits	372	Shared Neighborhood Hits	320
SwissProt Accessions	P80205	Gene names	Otx1, Otx-1
Domain Architecture
Description	Homeobox protein OTX1.

OTX2_MOUSE
θ value	6.43352e-06 (rank : 198)	NC score	0.814863 (rank : 219)
Query Neighborhood Hits	431	Target Neighborhood Hits	345	Shared Neighborhood Hits	310
SwissProt Accessions	P80206	Gene names	Otx2, Otx-2
Domain Architecture
Description	Homeobox protein OTX2.

DUX4_HUMAN
θ value	8.40245e-06 (rank : 199)	NC score	0.772135 (rank : 229)
Query Neighborhood Hits	431	Target Neighborhood Hits	403	Shared Neighborhood Hits	323
SwissProt Accessions	Q9UBX2	Gene names	DUX4, DUX10
Domain Architecture	No domain graphic available
Description	Double homeobox protein 4 (Double homeobox protein 10) (Double homeobox protein 4/10).

HXD10_HUMAN
θ value	1.09739e-05 (rank : 200)	NC score	0.834582 (rank : 209)
Query Neighborhood Hits	431	Target Neighborhood Hits	392	Shared Neighborhood Hits	317
SwissProt Accessions	P28358	Gene names	HOXD10, HOX4D
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4D) (Hox-4E).

HXD10_MOUSE
θ value	1.09739e-05 (rank : 201)	NC score	0.834238 (rank : 210)
Query Neighborhood Hits	431	Target Neighborhood Hits	392	Shared Neighborhood Hits	315
SwissProt Accessions	P28359, Q91WU9	Gene names	Hoxd10, Hox-4.5, Hoxd-10
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4.5) (Hox-5.3).

HXD12_HUMAN
θ value	1.09739e-05 (rank : 202)	NC score	0.867853 (rank : 168)
Query Neighborhood Hits	431	Target Neighborhood Hits	334	Shared Neighborhood Hits	309
SwissProt Accessions	P35452, Q9NS03	Gene names	HOXD12, HOX4H
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4H).

PROP1_HUMAN
θ value	1.43324e-05 (rank : 203)	NC score	0.859263 (rank : 180)
Query Neighborhood Hits	431	Target Neighborhood Hits	354	Shared Neighborhood Hits	323
SwissProt Accessions	O75360	Gene names	PROP1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

HXA10_HUMAN
θ value	1.87187e-05 (rank : 204)	NC score	0.839079 (rank : 200)
Query Neighborhood Hits	431	Target Neighborhood Hits	334	Shared Neighborhood Hits	304
SwissProt Accessions	P31260, O43370, O43605, Q15949	Gene names	HOXA10, HOX1H
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1H) (Hox-1.8) (PL).

HXA10_MOUSE
θ value	1.87187e-05 (rank : 205)	NC score	0.837749 (rank : 201)
Query Neighborhood Hits	431	Target Neighborhood Hits	365	Shared Neighborhood Hits	306
SwissProt Accessions	P31310, Q80Y22	Gene names	Hoxa10, Hox-1.8, Hoxa-10
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1.8).

CRX_MOUSE
θ value	2.44474e-05 (rank : 206)	NC score	0.835767 (rank : 206)
Query Neighborhood Hits	431	Target Neighborhood Hits	359	Shared Neighborhood Hits	315
SwissProt Accessions	O54751	Gene names	Crx
Domain Architecture
Description	Cone-rod homeobox protein.

PROP1_MOUSE
θ value	2.44474e-05 (rank : 207)	NC score	0.847719 (rank : 188)
Query Neighborhood Hits	431	Target Neighborhood Hits	361	Shared Neighborhood Hits	322
SwissProt Accessions	P97458	Gene names	Prop1, Prop-1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

CRX_HUMAN
θ value	3.19293e-05 (rank : 208)	NC score	0.839091 (rank : 199)
Query Neighborhood Hits	431	Target Neighborhood Hits	360	Shared Neighborhood Hits	322
SwissProt Accessions	O43186	Gene names	CRX, CORD2
Domain Architecture
Description	Cone-rod homeobox protein.

HXC9_HUMAN
θ value	3.19293e-05 (rank : 209)	NC score	0.825903 (rank : 215)
Query Neighborhood Hits	431	Target Neighborhood Hits	339	Shared Neighborhood Hits	309
SwissProt Accessions	P31274, Q9H1I0	Gene names	HOXC9, HOX3B
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3B).

HXC9_MOUSE
θ value	3.19293e-05 (rank : 210)	NC score	0.825811 (rank : 216)
Query Neighborhood Hits	431	Target Neighborhood Hits	338	Shared Neighborhood Hits	308
SwissProt Accessions	P09633	Gene names	Hoxc9, Hox-3.2, Hoxc-9
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3.2).

HXA13_HUMAN
θ value	4.1701e-05 (rank : 211)	NC score	0.829823 (rank : 212)
Query Neighborhood Hits	431	Target Neighborhood Hits	353	Shared Neighborhood Hits	318
SwissProt Accessions	P31271, O43371	Gene names	HOXA13, HOX1J
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1J).

HXA13_MOUSE
θ value	4.1701e-05 (rank : 212)	NC score	0.831280 (rank : 211)
Query Neighborhood Hits	431	Target Neighborhood Hits	351	Shared Neighborhood Hits	317
SwissProt Accessions	Q62424	Gene names	Hoxa13, Hox-1.10
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1.10).

HXC13_HUMAN
θ value	4.1701e-05 (rank : 213)	NC score	0.816362 (rank : 217)
Query Neighborhood Hits	431	Target Neighborhood Hits	336	Shared Neighborhood Hits	318
SwissProt Accessions	P31276, Q96J32, Q9NR24, Q9NYD5	Gene names	HOXC13, HOX3G
Domain Architecture
Description	Homeobox protein Hox-C13 (Hox-3G).

HXC13_MOUSE
θ value	4.1701e-05 (rank : 214)	NC score	0.816246 (rank : 218)
Query Neighborhood Hits	431	Target Neighborhood Hits	337	Shared Neighborhood Hits	318
SwissProt Accessions	P50207, Q53Z78, Q920I7	Gene names	Hoxc13, Hoxc-13
Domain Architecture
Description	Homeobox protein Hox-C13.

HXA9_HUMAN
θ value	5.44631e-05 (rank : 215)	NC score	0.842517 (rank : 193)
Query Neighborhood Hits	431	Target Neighborhood Hits	332	Shared Neighborhood Hits	309
SwissProt Accessions	P31269, O43369, O43429, Q99820	Gene names	HOXA9, HOX1G
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1G).

HXA9_MOUSE
θ value	5.44631e-05 (rank : 216)	NC score	0.843564 (rank : 191)
Query Neighborhood Hits	431	Target Neighborhood Hits	334	Shared Neighborhood Hits	309
SwissProt Accessions	P09631, O70154, O70155	Gene names	Hoxa9, Hox-1.7, Hoxa-9
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1.7).

HXD9_HUMAN
θ value	7.1131e-05 (rank : 217)	NC score	0.839980 (rank : 197)
Query Neighborhood Hits	431	Target Neighborhood Hits	352	Shared Neighborhood Hits	312
SwissProt Accessions	P28356	Gene names	HOXD9, HOX4C
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4C) (Hox-5.2).

HXD9_MOUSE
θ value	7.1131e-05 (rank : 218)	NC score	0.835577 (rank : 207)
Query Neighborhood Hits	431	Target Neighborhood Hits	359	Shared Neighborhood Hits	312
SwissProt Accessions	P28357, Q3UYS2	Gene names	Hoxd9, Hox-4.4, Hoxd-9
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4.4) (Hox-5.2).

DUX3_HUMAN
θ value	0.000121331 (rank : 219)	NC score	0.794247 (rank : 227)
Query Neighborhood Hits	431	Target Neighborhood Hits	312	Shared Neighborhood Hits	300
SwissProt Accessions	Q96PT4, Q9UND2	Gene names	DUX3
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 3.

HXD11_MOUSE
θ value	0.000158464 (rank : 220)	NC score	0.854852 (rank : 183)
Query Neighborhood Hits	431	Target Neighborhood Hits	376	Shared Neighborhood Hits	321
SwissProt Accessions	P23813	Gene names	Hoxd11, Hox-4.6, Hoxd-11
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5).

HESX1_HUMAN
θ value	0.00020696 (rank : 221)	NC score	0.863870 (rank : 173)
Query Neighborhood Hits	431	Target Neighborhood Hits	326	Shared Neighborhood Hits	307
SwissProt Accessions	Q9UBX0, Q99667	Gene names	HESX1, HANF
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (hAnf).

HXB9_HUMAN
θ value	0.00020696 (rank : 222)	NC score	0.826555 (rank : 213)
Query Neighborhood Hits	431	Target Neighborhood Hits	344	Shared Neighborhood Hits	311
SwissProt Accessions	P17482, Q9H1I1	Gene names	HOXB9, HOX2E
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2E) (Hox-2.5).

HXB9_MOUSE
θ value	0.00020696 (rank : 223)	NC score	0.826186 (rank : 214)
Query Neighborhood Hits	431	Target Neighborhood Hits	344	Shared Neighborhood Hits	309
SwissProt Accessions	P20615	Gene names	Hoxb9, Hox-2.5, Hoxb-9
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2.5).

DUX1_HUMAN
θ value	0.000270298 (rank : 224)	NC score	0.800729 (rank : 225)
Query Neighborhood Hits	431	Target Neighborhood Hits	330	Shared Neighborhood Hits	310
SwissProt Accessions	O43812	Gene names	DUX1
Domain Architecture	No domain graphic available
Description	Double homeobox protein 1.

DUX5_HUMAN
θ value	0.000270298 (rank : 225)	NC score	0.796082 (rank : 226)
Query Neighborhood Hits	431	Target Neighborhood Hits	330	Shared Neighborhood Hits	310
SwissProt Accessions	Q96PT3	Gene names	DUX5
Domain Architecture	No domain graphic available
Description	Double homeobox protein 5.

HXA11_HUMAN
θ value	0.000270298 (rank : 226)	NC score	0.846574 (rank : 189)
Query Neighborhood Hits	431	Target Neighborhood Hits	334	Shared Neighborhood Hits	302
SwissProt Accessions	P31270	Gene names	HOXA11, HOX1I
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1I).

HXA11_MOUSE
θ value	0.000270298 (rank : 227)	NC score	0.841803 (rank : 194)
Query Neighborhood Hits	431	Target Neighborhood Hits	327	Shared Neighborhood Hits	302
SwissProt Accessions	P31311, Q3V026	Gene names	Hoxa11, Hox-1.9, Hoxa-11
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1.9).

HXC11_HUMAN
θ value	0.000270298 (rank : 228)	NC score	0.848918 (rank : 187)
Query Neighborhood Hits	431	Target Neighborhood Hits	349	Shared Neighborhood Hits	311
SwissProt Accessions	O43248, Q96DH2	Gene names	HOXC11
Domain Architecture
Description	Homeobox protein Hox-C11.

HXD11_HUMAN
θ value	0.00035302 (rank : 229)	NC score	0.854809 (rank : 184)
Query Neighborhood Hits	431	Target Neighborhood Hits	353	Shared Neighborhood Hits	316
SwissProt Accessions	P31277, Q9NS02	Gene names	HOXD11, HOX4F
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4F).

LMX1A_HUMAN
θ value	0.000461057 (rank : 230)	NC score	0.502993 (rank : 247)
Query Neighborhood Hits	431	Target Neighborhood Hits	406	Shared Neighborhood Hits	303
SwissProt Accessions	Q8TE12, Q8TE11	Gene names	LMX1A
Domain Architecture
Description	LIM homeobox transcription factor 1 alpha (LIM/homeobox protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1).

ZHX3_HUMAN
θ value	0.000461057 (rank : 231)	NC score	0.233256 (rank : 327)
Query Neighborhood Hits	431	Target Neighborhood Hits	331	Shared Neighborhood Hits	218
SwissProt Accessions	Q9H4I2, O43145	Gene names	ZHX3, KIAA0395, TIX1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

HXB13_HUMAN
θ value	0.000602161 (rank : 232)	NC score	0.808572 (rank : 222)
Query Neighborhood Hits	431	Target Neighborhood Hits	377	Shared Neighborhood Hits	317
SwissProt Accessions	Q92826, Q96QM4, Q99810	Gene names	HOXB13
Domain Architecture
Description	Homeobox protein Hox-B13.

LMX1A_MOUSE
θ value	0.000602161 (rank : 233)	NC score	0.500834 (rank : 251)
Query Neighborhood Hits	431	Target Neighborhood Hits	405	Shared Neighborhood Hits	302
SwissProt Accessions	Q9JKU8	Gene names	Lmx1a
Domain Architecture
Description	LIM homeobox transcription factor 1 alpha (LIM/homeobox protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1).

SIX1_HUMAN
θ value	0.000602161 (rank : 234)	NC score	0.368522 (rank : 284)
Query Neighborhood Hits	431	Target Neighborhood Hits	343	Shared Neighborhood Hits	301
SwissProt Accessions	Q15475, Q96H64	Gene names	SIX1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX1_MOUSE
θ value	0.000602161 (rank : 235)	NC score	0.368852 (rank : 283)
Query Neighborhood Hits	431	Target Neighborhood Hits	341	Shared Neighborhood Hits	301
SwissProt Accessions	Q62231, Q8CIL7	Gene names	Six1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

HXB13_MOUSE
θ value	0.000786445 (rank : 236)	NC score	0.810361 (rank : 221)
Query Neighborhood Hits	431	Target Neighborhood Hits	384	Shared Neighborhood Hits	314
SwissProt Accessions	P70321, Q80Y12	Gene names	Hoxb13
Domain Architecture
Description	Homeobox protein Hox-B13.

DUX2_HUMAN
θ value	0.00102713 (rank : 237)	NC score	0.549173 (rank : 238)
Query Neighborhood Hits	431	Target Neighborhood Hits	173	Shared Neighborhood Hits	168
SwissProt Accessions	O75505	Gene names	DUX2
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 2.

ZFHX2_HUMAN
θ value	0.00102713 (rank : 238)	NC score	0.562171 (rank : 237)
Query Neighborhood Hits	431	Target Neighborhood Hits	1178	Shared Neighborhood Hits	331
SwissProt Accessions	Q9C0A1	Gene names	ZFHX2, KIAA1762
Domain Architecture
Description	Zinc finger homeobox protein 2.

HXC12_HUMAN
θ value	0.00134147 (rank : 239)	NC score	0.841798 (rank : 195)
Query Neighborhood Hits	431	Target Neighborhood Hits	313	Shared Neighborhood Hits	303
SwissProt Accessions	P31275, Q9BXJ6	Gene names	HOXC12, HOX3F
Domain Architecture
Description	Homeobox protein Hox-C12 (Hox-3F).

HXC12_MOUSE
θ value	0.00134147 (rank : 240)	NC score	0.839623 (rank : 198)
Query Neighborhood Hits	431	Target Neighborhood Hits	316	Shared Neighborhood Hits	303
SwissProt Accessions	Q8K5B8	Gene names	Hoxc12, Hox-3.8, Hoxc-12
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C12 (Hox-3.8).

MUC1_HUMAN
θ value	0.00175202 (rank : 241)	NC score	0.035347 (rank : 391)
Query Neighborhood Hits	431	Target Neighborhood Hits	975	Shared Neighborhood Hits	76
SwissProt Accessions	P15941, P13931, P15942, P17626, Q14128, Q14876, Q16437, Q16442, Q16615, Q9BXA4, Q9UE75, Q9UE76, Q9UQL1, Q9Y4J2	Gene names	MUC1
Domain Architecture
Description	Mucin-1 precursor (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) (H23AG) (Peanut- reactive urinary mucin) (PUM) (Breast carcinoma-associated antigen DF3) (CD227 antigen).

HESX1_MOUSE
θ value	0.00228821 (rank : 242)	NC score	0.863293 (rank : 175)
Query Neighborhood Hits	431	Target Neighborhood Hits	331	Shared Neighborhood Hits	306
SwissProt Accessions	Q61658, Q61047	Gene names	Hesx1, Hes-1, Rpx
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (Anterior- restricted homeobox protein) (Rathke pouch homeo box).

HXD13_HUMAN
θ value	0.00228821 (rank : 243)	NC score	0.805573 (rank : 223)
Query Neighborhood Hits	431	Target Neighborhood Hits	332	Shared Neighborhood Hits	312
SwissProt Accessions	P35453	Gene names	HOXD13, HOX4I
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4I).

HXD13_MOUSE
θ value	0.00228821 (rank : 244)	NC score	0.805015 (rank : 224)
Query Neighborhood Hits	431	Target Neighborhood Hits	324	Shared Neighborhood Hits	310
SwissProt Accessions	P70217, Q2VPB0, Q2VPB1, Q64177	Gene names	Hoxd13, Hox-4.8
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4.8).

LHX4_HUMAN
θ value	0.00228821 (rank : 245)	NC score	0.510477 (rank : 242)
Query Neighborhood Hits	431	Target Neighborhood Hits	455	Shared Neighborhood Hits	326
SwissProt Accessions	Q969G2, Q8NHE0, Q8TCJ1, Q8WWX2, Q969W2	Gene names	LHX4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

NFH_MOUSE
θ value	0.00228821 (rank : 246)	NC score	0.017597 (rank : 428)
Query Neighborhood Hits	431	Target Neighborhood Hits	2247	Shared Neighborhood Hits	99
SwissProt Accessions	P19246, Q5SVF6, Q61959	Gene names	Nefh, Nfh
Domain Architecture
Description	Neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H).

IRX2_MOUSE
θ value	0.00298849 (rank : 247)	NC score	0.298436 (rank : 309)
Query Neighborhood Hits	431	Target Neighborhood Hits	264	Shared Neighborhood Hits	215
SwissProt Accessions	P81066, O55121, Q9ERN1	Gene names	Irx2, Irxa2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

LHX3_HUMAN
θ value	0.00298849 (rank : 248)	NC score	0.512669 (rank : 241)
Query Neighborhood Hits	431	Target Neighborhood Hits	474	Shared Neighborhood Hits	330
SwissProt Accessions	Q9UBR4, Q9NZB5, Q9P0I8, Q9P0I9	Gene names	LHX3
Domain Architecture
Description	LIM/homeobox protein Lhx3.

LHX3_MOUSE
θ value	0.00298849 (rank : 249)	NC score	0.506185 (rank : 244)
Query Neighborhood Hits	431	Target Neighborhood Hits	451	Shared Neighborhood Hits	321
SwissProt Accessions	P50481, Q61800, Q61801	Gene names	Lhx3, Lim-3, Lim3, Plim
Domain Architecture
Description	LIM/homeobox protein Lhx3 (Homeobox protein LIM-3) (Homeobox protein P-LIM) (LIM homeobox protein 3).

LHX4_MOUSE
θ value	0.00298849 (rank : 250)	NC score	0.509885 (rank : 243)
Query Neighborhood Hits	431	Target Neighborhood Hits	457	Shared Neighborhood Hits	326
SwissProt Accessions	P53776, O08916, Q9R280	Gene names	Lhx4, Gsh-4, Gsh4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

LHX2_MOUSE
θ value	0.00390308 (rank : 251)	NC score	0.517846 (rank : 240)
Query Neighborhood Hits	431	Target Neighborhood Hits	431	Shared Neighborhood Hits	304
SwissProt Accessions	Q9Z0S2	Gene names	Lhx2
Domain Architecture
Description	LIM/homeobox protein Lhx2.

IRX2_HUMAN
θ value	0.00509761 (rank : 252)	NC score	0.325012 (rank : 297)
Query Neighborhood Hits	431	Target Neighborhood Hits	358	Shared Neighborhood Hits	224
SwissProt Accessions	Q9BZI1, Q7Z2I7	Gene names	IRX2, IRXA2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

LHX1_HUMAN
θ value	0.00509761 (rank : 253)	NC score	0.501495 (rank : 250)
Query Neighborhood Hits	431	Target Neighborhood Hits	453	Shared Neighborhood Hits	315
SwissProt Accessions	P48742, Q3MIW0	Gene names	LHX1, LIM1
Domain Architecture
Description	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1).

LHX1_MOUSE
θ value	0.00509761 (rank : 254)	NC score	0.502203 (rank : 249)
Query Neighborhood Hits	431	Target Neighborhood Hits	453	Shared Neighborhood Hits	315
SwissProt Accessions	P63006, P36199	Gene names	Lhx1, Lim-1, Lim1
Domain Architecture	No domain graphic available
Description	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1).

LHX5_HUMAN
θ value	0.00509761 (rank : 255)	NC score	0.504327 (rank : 245)
Query Neighborhood Hits	431	Target Neighborhood Hits	453	Shared Neighborhood Hits	316
SwissProt Accessions	Q9H2C1	Gene names	LHX5
Domain Architecture
Description	LIM/homeobox protein Lhx5.

LHX5_MOUSE
θ value	0.00509761 (rank : 256)	NC score	0.504147 (rank : 246)
Query Neighborhood Hits	431	Target Neighborhood Hits	456	Shared Neighborhood Hits	316
SwissProt Accessions	P61375, P50459	Gene names	Lhx5
Domain Architecture
Description	LIM/homeobox protein Lhx5.

LHX2_HUMAN
θ value	0.00869519 (rank : 257)	NC score	0.518942 (rank : 239)
Query Neighborhood Hits	431	Target Neighborhood Hits	432	Shared Neighborhood Hits	304
SwissProt Accessions	P50458, O95860, Q8N1Z3	Gene names	LHX2, LH2
Domain Architecture
Description	LIM/homeobox protein Lhx2 (Homeobox protein LH-2).

IRX4_HUMAN
θ value	0.0113563 (rank : 258)	NC score	0.336746 (rank : 293)
Query Neighborhood Hits	431	Target Neighborhood Hits	276	Shared Neighborhood Hits	247
SwissProt Accessions	P78413, Q9UHR2	Gene names	IRX4, IRXA3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

NPAS4_MOUSE
θ value	0.0113563 (rank : 259)	NC score	0.038313 (rank : 389)
Query Neighborhood Hits	431	Target Neighborhood Hits	245	Shared Neighborhood Hits	21
SwissProt Accessions	Q8BGD7, Q3V3U3	Gene names	Npas4, Nxf
Domain Architecture	No domain graphic available
Description	Neuronal PAS domain-containing protein 4 (Neuronal PAS4) (HLH-PAS transcription factor NXF) (Limbic-enhanced PAS protein) (LE-PAS).

SIX2_MOUSE
θ value	0.0113563 (rank : 260)	NC score	0.393641 (rank : 270)
Query Neighborhood Hits	431	Target Neighborhood Hits	376	Shared Neighborhood Hits	311
SwissProt Accessions	Q62232, P70179	Gene names	Six2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

IRX6_HUMAN
θ value	0.0148317 (rank : 261)	NC score	0.340785 (rank : 291)
Query Neighborhood Hits	431	Target Neighborhood Hits	262	Shared Neighborhood Hits	231
SwissProt Accessions	P78412, Q7Z2K0	Gene names	IRX6, IRX7, IRXB3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

K1802_MOUSE
θ value	0.0148317 (rank : 262)	NC score	0.016240 (rank : 430)
Query Neighborhood Hits	431	Target Neighborhood Hits	1596	Shared Neighborhood Hits	76
SwissProt Accessions	Q8K327, Q3UZ85, Q6ZPI1	Gene names	Kiaa1802, D8Ertd457e
Domain Architecture	No domain graphic available
Description	Zinc finger protein KIAA1802.

LPP_HUMAN
θ value	0.0193708 (rank : 263)	NC score	0.050738 (rank : 384)
Query Neighborhood Hits	431	Target Neighborhood Hits	775	Shared Neighborhood Hits	79
SwissProt Accessions	Q93052, Q8NFX5	Gene names	LPP
Domain Architecture	No domain graphic available
Description	Lipoma-preferred partner (LIM domain-containing preferred translocation partner in lipoma).

PO2F3_MOUSE
θ value	0.0193708 (rank : 264)	NC score	0.403248 (rank : 264)
Query Neighborhood Hits	431	Target Neighborhood Hits	328	Shared Neighborhood Hits	290
SwissProt Accessions	P31362	Gene names	Pou2f3, Epoc1, Oct11, Otf-11, Otf11
Domain Architecture
Description	POU domain, class 2, transcription factor 3 (Octamer-binding transcription factor 11) (Oct-11) (Epoc-1).

SIX4_HUMAN
θ value	0.0193708 (rank : 265)	NC score	0.374406 (rank : 278)
Query Neighborhood Hits	431	Target Neighborhood Hits	342	Shared Neighborhood Hits	275
SwissProt Accessions	Q9UIU6	Gene names	SIX4
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4).

ARNT_MOUSE
θ value	0.0252991 (rank : 266)	NC score	0.020515 (rank : 420)
Query Neighborhood Hits	431	Target Neighborhood Hits	213	Shared Neighborhood Hits	19
SwissProt Accessions	P53762, Q60661	Gene names	Arnt
Domain Architecture
Description	Aryl hydrocarbon receptor nuclear translocator (ARNT protein) (Dioxin receptor, nuclear translocator) (Hypoxia-inducible factor 1 beta) (HIF-1 beta).

ATBF1_HUMAN
θ value	0.0330416 (rank : 267)	NC score	0.389859 (rank : 273)
Query Neighborhood Hits	431	Target Neighborhood Hits	1547	Shared Neighborhood Hits	353
SwissProt Accessions	Q15911, O15101, Q13719	Gene names	ATBF1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

ATBF1_MOUSE
θ value	0.0330416 (rank : 268)	NC score	0.387605 (rank : 275)
Query Neighborhood Hits	431	Target Neighborhood Hits	1841	Shared Neighborhood Hits	359
SwissProt Accessions	Q61329	Gene names	Atbf1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

LMX1B_HUMAN
θ value	0.0330416 (rank : 269)	NC score	0.477068 (rank : 259)
Query Neighborhood Hits	431	Target Neighborhood Hits	404	Shared Neighborhood Hits	299
SwissProt Accessions	O60663, O75463	Gene names	LMX1B
Domain Architecture
Description	LIM homeobox transcription factor 1 beta (LIM/homeobox protein LMX1B) (LIM-homeobox protein 1.2) (LMX-1.2).

LMX1B_MOUSE
θ value	0.0330416 (rank : 270)	NC score	0.477363 (rank : 258)
Query Neighborhood Hits	431	Target Neighborhood Hits	394	Shared Neighborhood Hits	300
SwissProt Accessions	O88609	Gene names	Lmx1b
Domain Architecture
Description	LIM homeobox transcription factor 1 beta (LIM/homeobox protein LMX1B) (LIM-homeobox protein 1.2) (LMX-1.2).

PO2F2_MOUSE
θ value	0.0330416 (rank : 271)	NC score	0.394785 (rank : 269)
Query Neighborhood Hits	431	Target Neighborhood Hits	353	Shared Neighborhood Hits	294
SwissProt Accessions	Q00196, Q00197, Q00198, Q00199, Q00200, Q00201, Q05882, Q61995, Q61996, Q64245	Gene names	Pou2f2, Oct2, Otf2
Domain Architecture
Description	POU domain, class 2, transcription factor 2 (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2).

SIX2_HUMAN
θ value	0.0330416 (rank : 272)	NC score	0.370792 (rank : 281)
Query Neighborhood Hits	431	Target Neighborhood Hits	345	Shared Neighborhood Hits	288
SwissProt Accessions	Q9NPC8, Q9BXH7	Gene names	SIX2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

IRX5_HUMAN
θ value	0.0431538 (rank : 273)	NC score	0.296032 (rank : 315)
Query Neighborhood Hits	431	Target Neighborhood Hits	362	Shared Neighborhood Hits	216
SwissProt Accessions	P78411, P78416, Q7Z2E1	Gene names	IRX5, IRX2A, IRXB2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2) (IRX-2A).

PO2F2_HUMAN
θ value	0.0431538 (rank : 274)	NC score	0.393607 (rank : 271)
Query Neighborhood Hits	431	Target Neighborhood Hits	379	Shared Neighborhood Hits	292
SwissProt Accessions	P09086, Q16648, Q9BRS4	Gene names	POU2F2, OCT2, OTF2
Domain Architecture
Description	POU domain, class 2, transcription factor 2 (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2).

PO6F1_HUMAN
θ value	0.0431538 (rank : 275)	NC score	0.457345 (rank : 261)
Query Neighborhood Hits	431	Target Neighborhood Hits	370	Shared Neighborhood Hits	305
SwissProt Accessions	Q14863	Gene names	POU6F1, BRN5, MPOU, TCFB1
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (mPOU homeobox protein) (Brain-specific homeobox/POU domain protein 5) (Brain-5) (Brn-5 protein).

PO6F1_MOUSE
θ value	0.0431538 (rank : 276)	NC score	0.441085 (rank : 262)
Query Neighborhood Hits	431	Target Neighborhood Hits	581	Shared Neighborhood Hits	315
SwissProt Accessions	Q07916, Q91XK3	Gene names	Pou6f1, Emb
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (Octamer-binding transcription factor EMB) (Transcription regulatory protein MCP-1).

SIX4_MOUSE
θ value	0.0431538 (rank : 277)	NC score	0.388796 (rank : 274)
Query Neighborhood Hits	431	Target Neighborhood Hits	341	Shared Neighborhood Hits	280
SwissProt Accessions	Q61321, Q61322, Q61323	Gene names	Six4, Arec3
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4) (Skeletal muscle-specific ARE-binding protein AREC3).

IRX4_MOUSE
θ value	0.0563607 (rank : 278)	NC score	0.337636 (rank : 292)
Query Neighborhood Hits	431	Target Neighborhood Hits	286	Shared Neighborhood Hits	247
SwissProt Accessions	Q9QY61	Gene names	Irx4, Irxa3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

IRX5_MOUSE
θ value	0.0563607 (rank : 279)	NC score	0.287370 (rank : 318)
Query Neighborhood Hits	431	Target Neighborhood Hits	324	Shared Neighborhood Hits	216
SwissProt Accessions	Q9JKQ4, Q80WV4, Q9JLL5	Gene names	Irx5, Irxb2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2).

LHX8_MOUSE
θ value	0.0563607 (rank : 280)	NC score	0.478626 (rank : 256)
Query Neighborhood Hits	431	Target Neighborhood Hits	406	Shared Neighborhood Hits	296
SwissProt Accessions	O35652, O70163, O88707	Gene names	Lhx8, Lhx7
Domain Architecture
Description	LIM/homeobox protein Lhx8 (LIM homeodomain Lhx7) (L3).

PO2F3_HUMAN
θ value	0.0563607 (rank : 281)	NC score	0.397975 (rank : 268)
Query Neighborhood Hits	431	Target Neighborhood Hits	319	Shared Neighborhood Hits	286
SwissProt Accessions	Q9UKI9, Q9UKR7, Q9Y504	Gene names	POU2F3, OTF11, PLA1
Domain Architecture
Description	POU domain, class 2, transcription factor 3 (Octamer-binding transcription factor 11) (Oct-11) (Transcription factor Skn-1) (PLA-1 protein).

TTLL5_MOUSE
θ value	0.0563607 (rank : 282)	NC score	0.025654 (rank : 406)
Query Neighborhood Hits	431	Target Neighborhood Hits	150	Shared Neighborhood Hits	11
SwissProt Accessions	Q8CHB8	Gene names	Ttll5, Kiaa0998
Domain Architecture	No domain graphic available
Description	Tubulin--tyrosine ligase-like protein 5.

CIC_HUMAN
θ value	0.0736092 (rank : 283)	NC score	0.035451 (rank : 390)
Query Neighborhood Hits	431	Target Neighborhood Hits	992	Shared Neighborhood Hits	72
SwissProt Accessions	Q96RK0, Q7LGI1, Q9UEG5, Q9Y6T1	Gene names	CIC, KIAA0306
Domain Architecture	No domain graphic available
Description	Protein capicua homolog.

LHX9_HUMAN
θ value	0.0736092 (rank : 284)	NC score	0.498393 (rank : 254)
Query Neighborhood Hits	431	Target Neighborhood Hits	444	Shared Neighborhood Hits	301
SwissProt Accessions	Q9NQ69, Q5VUE3, Q9BYU6, Q9NQ70	Gene names	LHX9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

LHX9_MOUSE
θ value	0.0736092 (rank : 285)	NC score	0.498805 (rank : 253)
Query Neighborhood Hits	431	Target Neighborhood Hits	445	Shared Neighborhood Hits	302
SwissProt Accessions	Q9WUH2, Q9QYQ5, Q9QYQ6, Q9QZ00, Q9WU44	Gene names	Lhx9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

NACAM_MOUSE
θ value	0.0736092 (rank : 286)	NC score	0.039250 (rank : 388)
Query Neighborhood Hits	431	Target Neighborhood Hits	1866	Shared Neighborhood Hits	104
SwissProt Accessions	P70670	Gene names	Naca
Domain Architecture	No domain graphic available
Description	Nascent polypeptide-associated complex subunit alpha, muscle-specific form (Alpha-NAC, muscle-specific form).

HRBL_MOUSE
θ value	0.0961366 (rank : 287)	NC score	0.025348 (rank : 407)
Query Neighborhood Hits	431	Target Neighborhood Hits	269	Shared Neighborhood Hits	22
SwissProt Accessions	Q80WC7, Q8BKS5, Q99J67	Gene names	Hrbl, Rabr
Domain Architecture
Description	HIV-1 Rev-binding protein-like protein (Rev/Rex activation domain- binding protein related) (RAB-R).

IRX6_MOUSE
θ value	0.0961366 (rank : 288)	NC score	0.354642 (rank : 286)
Query Neighborhood Hits	431	Target Neighborhood Hits	256	Shared Neighborhood Hits	226
SwissProt Accessions	Q9ER75	Gene names	Irx6, Irxb3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

LHX61_HUMAN
θ value	0.0961366 (rank : 289)	NC score	0.500154 (rank : 252)
Query Neighborhood Hits	431	Target Neighborhood Hits	412	Shared Neighborhood Hits	296
SwissProt Accessions	Q9UPM6, Q5T7S8, Q9NTK3, Q9UPM5	Gene names	LHX6, LHX6.1
Domain Architecture
Description	LIM/homeobox protein Lhx6.1 (Lhx6).

LHX6_MOUSE
θ value	0.0961366 (rank : 290)	NC score	0.502858 (rank : 248)
Query Neighborhood Hits	431	Target Neighborhood Hits	399	Shared Neighborhood Hits	297
SwissProt Accessions	O88706	Gene names	Lhx6
Domain Architecture
Description	LIM/homeobox protein Lhx6.

IRX3_HUMAN
θ value	0.125558 (rank : 291)	NC score	0.314201 (rank : 303)
Query Neighborhood Hits	431	Target Neighborhood Hits	342	Shared Neighborhood Hits	220
SwissProt Accessions	P78415, Q7Z4A4, Q7Z4A5, Q8IVC6	Gene names	IRX3, IRXB1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX3_MOUSE
θ value	0.125558 (rank : 292)	NC score	0.316541 (rank : 301)
Query Neighborhood Hits	431	Target Neighborhood Hits	303	Shared Neighborhood Hits	221
SwissProt Accessions	P81067	Gene names	Irx3, Irxb1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

PO6F2_HUMAN
θ value	0.125558 (rank : 293)	NC score	0.478159 (rank : 257)
Query Neighborhood Hits	431	Target Neighborhood Hits	618	Shared Neighborhood Hits	314
SwissProt Accessions	P78424, P78425, Q75ME8, Q86UM6, Q9UDS7	Gene names	POU6F2, RPF1
Domain Architecture
Description	POU domain, class 6, transcription factor 2 (Retina-derived POU-domain factor 1) (RPF-1).

PO6F2_MOUSE
θ value	0.125558 (rank : 294)	NC score	0.480544 (rank : 255)
Query Neighborhood Hits	431	Target Neighborhood Hits	639	Shared Neighborhood Hits	319
SwissProt Accessions	Q8BJI4	Gene names	Pou6f2
Domain Architecture	No domain graphic available
Description	POU domain, class 6, transcription factor 2.

SC24C_HUMAN
θ value	0.125558 (rank : 295)	NC score	0.044283 (rank : 386)
Query Neighborhood Hits	431	Target Neighborhood Hits	662	Shared Neighborhood Hits	67
SwissProt Accessions	P53992, Q8WV25	Gene names	SEC24C, KIAA0079
Domain Architecture
Description	Protein transport protein Sec24C (SEC24-related protein C).

T22D4_HUMAN
θ value	0.125558 (rank : 296)	NC score	0.025015 (rank : 408)
Query Neighborhood Hits	431	Target Neighborhood Hits	403	Shared Neighborhood Hits	31
SwissProt Accessions	Q9Y3Q8	Gene names	TSC22D4, TILZ2
Domain Architecture
Description	TSC22 domain family protein 4 (TSC22-related-inducible leucine zipper protein 2) (Tsc-22-like protein THG-1).

TCGAP_HUMAN
θ value	0.125558 (rank : 297)	NC score	0.028966 (rank : 402)
Query Neighborhood Hits	431	Target Neighborhood Hits	872	Shared Neighborhood Hits	60
SwissProt Accessions	O14559, O14552, O14560, Q6ZSP6, Q96CP3, Q9NT23	Gene names	SNX26, TCGAP
Domain Architecture
Description	TC10/CDC42 GTPase-activating protein (Sorting nexin-26).

LHX61_MOUSE
θ value	0.163984 (rank : 298)	NC score	0.467104 (rank : 260)
Query Neighborhood Hits	431	Target Neighborhood Hits	396	Shared Neighborhood Hits	279
SwissProt Accessions	Q9R1R0, Q9R1R1	Gene names	Lhx6.1
Domain Architecture
Description	LIM/homeobox protein Lhx6.1.

PBX4_MOUSE
θ value	0.163984 (rank : 299)	NC score	0.369634 (rank : 282)
Query Neighborhood Hits	431	Target Neighborhood Hits	324	Shared Neighborhood Hits	276
SwissProt Accessions	Q99NE9, Q8CFL2, Q99NE8	Gene names	Pbx4
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4).

EGR4_HUMAN
θ value	0.21417 (rank : 300)	NC score	-0.007985 (rank : 480)
Query Neighborhood Hits	431	Target Neighborhood Hits	939	Shared Neighborhood Hits	28
SwissProt Accessions	Q05215	Gene names	EGR4
Domain Architecture
Description	Early growth response protein 4 (EGR-4) (AT133).

STAM2_MOUSE
θ value	0.21417 (rank : 301)	NC score	0.006054 (rank : 455)
Query Neighborhood Hits	431	Target Neighborhood Hits	285	Shared Neighborhood Hits	6
SwissProt Accessions	O88811, Q8C8Y4	Gene names	Stam2, Hbp
Domain Architecture	No domain graphic available
Description	Signal transducing adapter molecule 2 (STAM-2) (Hrs-binding protein).

RP1L1_HUMAN
θ value	0.279714 (rank : 302)	NC score	0.021488 (rank : 417)
Query Neighborhood Hits	431	Target Neighborhood Hits	1072	Shared Neighborhood Hits	51
SwissProt Accessions	Q8IWN7, Q86SQ1, Q8IWN8, Q8IWN9, Q8IWP0, Q8IWP1, Q8IWP2	Gene names	RP1L1
Domain Architecture
Description	Retinitis pigmentosa 1-like 1 protein.

SAPS1_HUMAN
θ value	0.279714 (rank : 303)	NC score	0.031523 (rank : 397)
Query Neighborhood Hits	431	Target Neighborhood Hits	704	Shared Neighborhood Hits	54
SwissProt Accessions	Q9UPN7, Q504V2, Q6NVJ6, Q9BU97	Gene names	SAPS1, KIAA1115
Domain Architecture
Description	SAPS domain family member 1.

SYNP2_HUMAN
θ value	0.279714 (rank : 304)	NC score	0.021889 (rank : 415)
Query Neighborhood Hits	431	Target Neighborhood Hits	323	Shared Neighborhood Hits	21
SwissProt Accessions	Q9UMS6, Q9UK89	Gene names	SYNPO2
Domain Architecture	No domain graphic available
Description	Synaptopodin-2 (Myopodin) (Genethonin 2).

IRX1_HUMAN
θ value	0.365318 (rank : 305)	NC score	0.294002 (rank : 316)
Query Neighborhood Hits	431	Target Neighborhood Hits	285	Shared Neighborhood Hits	221
SwissProt Accessions	P78414, Q7Z2F8, Q8N312	Gene names	IRX1, IRXA1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX1_MOUSE
θ value	0.365318 (rank : 306)	NC score	0.289917 (rank : 317)
Query Neighborhood Hits	431	Target Neighborhood Hits	269	Shared Neighborhood Hits	217
SwissProt Accessions	P81068, O55120, Q9JLL6	Gene names	Irx1, Irxa1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

KCNH4_HUMAN
θ value	0.365318 (rank : 307)	NC score	0.007632 (rank : 452)
Query Neighborhood Hits	431	Target Neighborhood Hits	177	Shared Neighborhood Hits	11
SwissProt Accessions	Q9UQ05	Gene names	KCNH4
Domain Architecture
Description	Potassium voltage-gated channel subfamily H member 4 (Voltage-gated potassium channel subunit Kv12.3) (Ether-a-go-go-like potassium channel 1) (ELK channel 1) (ELK1) (Brain-specific eag-like channel 2) (BEC2).

LEUK_HUMAN
θ value	0.365318 (rank : 308)	NC score	0.031189 (rank : 398)
Query Neighborhood Hits	431	Target Neighborhood Hits	213	Shared Neighborhood Hits	23
SwissProt Accessions	P16150	Gene names	SPN, CD43
Domain Architecture	No domain graphic available
Description	Leukosialin precursor (Leukocyte sialoglycoprotein) (Sialophorin) (Galactoglycoprotein) (GALGP) (CD43 antigen).

PO2F1_HUMAN
θ value	0.365318 (rank : 309)	NC score	0.390544 (rank : 272)
Query Neighborhood Hits	431	Target Neighborhood Hits	426	Shared Neighborhood Hits	310
SwissProt Accessions	P14859, Q5TBT7, Q6PK46, Q8NEU9, Q9BPV1	Gene names	POU2F1, OCT1, OTF1
Domain Architecture
Description	POU domain, class 2, transcription factor 1 (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1).

RANB3_HUMAN
θ value	0.365318 (rank : 310)	NC score	0.033425 (rank : 393)
Query Neighborhood Hits	431	Target Neighborhood Hits	117	Shared Neighborhood Hits	18
SwissProt Accessions	Q9H6Z4, O60405, O75759, O75760, Q9BT47, Q9UG74	Gene names	RANBP3
Domain Architecture	No domain graphic available
Description	Ran-binding protein 3 (RanBP3).

ISL2_HUMAN
θ value	0.47712 (rank : 311)	NC score	0.405513 (rank : 263)
Query Neighborhood Hits	431	Target Neighborhood Hits	435	Shared Neighborhood Hits	308
SwissProt Accessions	Q96A47	Gene names	ISL2
Domain Architecture
Description	Insulin gene enhancer protein ISL-2 (Islet-2).

NPAS4_HUMAN
θ value	0.47712 (rank : 312)	NC score	0.031936 (rank : 395)
Query Neighborhood Hits	431	Target Neighborhood Hits	214	Shared Neighborhood Hits	17
SwissProt Accessions	Q8IUM7, Q8N8S5, Q8N9Q9	Gene names	NPAS4, NXF
Domain Architecture	No domain graphic available
Description	Neuronal PAS domain-containing protein 4 (Neuronal PAS4) (HLH-PAS transcription factor NXF).

SIX5_HUMAN
θ value	0.47712 (rank : 313)	NC score	0.309887 (rank : 305)
Query Neighborhood Hits	431	Target Neighborhood Hits	386	Shared Neighborhood Hits	250
SwissProt Accessions	Q8N196	Gene names	SIX5, DMAHP
Domain Architecture	No domain graphic available
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein).

CEL_HUMAN
θ value	0.62314 (rank : 314)	NC score	0.019911 (rank : 421)
Query Neighborhood Hits	431	Target Neighborhood Hits	896	Shared Neighborhood Hits	61
SwissProt Accessions	P19835, Q16398	Gene names	CEL, BAL
Domain Architecture
Description	Bile salt-activated lipase precursor (EC 3.1.1.3) (EC 3.1.1.13) (BAL) (Bile salt-stimulated lipase) (BSSL) (Carboxyl ester lipase) (Sterol esterase) (Cholesterol esterase) (Pancreatic lysophospholipase).

PER3_HUMAN
θ value	0.62314 (rank : 315)	NC score	0.022517 (rank : 412)
Query Neighborhood Hits	431	Target Neighborhood Hits	479	Shared Neighborhood Hits	43
SwissProt Accessions	P56645, Q5H8X4, Q969K6, Q96S77, Q96S78, Q9C0J3, Q9NSP9, Q9UGU8	Gene names	PER3
Domain Architecture
Description	Period circadian protein 3 (hPER3).

PIT1_HUMAN
θ value	0.62314 (rank : 316)	NC score	0.378838 (rank : 276)
Query Neighborhood Hits	431	Target Neighborhood Hits	292	Shared Neighborhood Hits	267
SwissProt Accessions	P28069, O75757, Q15132, Q15133, Q9UEL3	Gene names	POU1F1, GHF1, PIT1
Domain Architecture
Description	Pituitary-specific positive transcription factor 1 (Pit-1) (Growth hormone factor 1) (GHF-1).

PIT1_MOUSE
θ value	0.62314 (rank : 317)	NC score	0.366943 (rank : 285)
Query Neighborhood Hits	431	Target Neighborhood Hits	313	Shared Neighborhood Hits	281
SwissProt Accessions	Q00286	Gene names	Pou1f1, Pit-1, Pit1
Domain Architecture
Description	Pituitary-specific positive transcription factor 1 (Pit-1) (Growth hormone factor 1) (GHF-1).

PO2F1_MOUSE
θ value	0.62314 (rank : 318)	NC score	0.378113 (rank : 277)
Query Neighborhood Hits	431	Target Neighborhood Hits	408	Shared Neighborhood Hits	300
SwissProt Accessions	P25425, Q61994, Q63891, Q6Y681, Q7TSD0, Q8BT04, Q8K570, Q99JH0, Q9WTZ4, Q9WTZ5, Q9WTZ6	Gene names	Pou2f1, Oct-1, Otf-1, Otf1
Domain Architecture
Description	POU domain, class 2, transcription factor 1 (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1).

TGIF2_MOUSE
θ value	0.62314 (rank : 319)	NC score	0.085305 (rank : 354)
Query Neighborhood Hits	431	Target Neighborhood Hits	127	Shared Neighborhood Hits	65
SwissProt Accessions	Q8C0Y1	Gene names	Tgif2
Domain Architecture	No domain graphic available
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

COE3_HUMAN
θ value	0.813845 (rank : 320)	NC score	0.012843 (rank : 438)
Query Neighborhood Hits	431	Target Neighborhood Hits	76	Shared Neighborhood Hits	7
SwissProt Accessions	Q9H4W6, Q5T6H9, Q9H4W5	Gene names	EBF3, COE3
Domain Architecture	No domain graphic available
Description	Transcription factor COE3 (Early B-cell factor 3) (EBF-3) (Olf-1/EBF- like 2) (OE-2) (O/E-2).

COE3_MOUSE
θ value	0.813845 (rank : 321)	NC score	0.012522 (rank : 439)
Query Neighborhood Hits	431	Target Neighborhood Hits	60	Shared Neighborhood Hits	7
SwissProt Accessions	O08791, O08793	Gene names	Ebf3, Coe3
Domain Architecture
Description	Transcription factor COE3 (Early B-cell factor 3) (EBF-3) (Olf-1/EBF- like 2) (OE-2) (O/E-2).

NFRKB_HUMAN
θ value	0.813845 (rank : 322)	NC score	0.034036 (rank : 392)
Query Neighborhood Hits	431	Target Neighborhood Hits	211	Shared Neighborhood Hits	27
SwissProt Accessions	Q6P4R8, Q12869, Q15312, Q9H048	Gene names	NFRKB
Domain Architecture	No domain graphic available
Description	Nuclear factor related to kappa-B-binding protein (DNA-binding protein R kappa-B).

SIX5_MOUSE
θ value	0.813845 (rank : 323)	NC score	0.246919 (rank : 325)
Query Neighborhood Hits	431	Target Neighborhood Hits	354	Shared Neighborhood Hits	220
SwissProt Accessions	P70178	Gene names	Six5, Dmahp
Domain Architecture
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein homolog).

SRRM2_MOUSE
θ value	0.813845 (rank : 324)	NC score	0.029929 (rank : 401)
Query Neighborhood Hits	431	Target Neighborhood Hits	1470	Shared Neighborhood Hits	76
SwissProt Accessions	Q8BTI8, Q3TBY5, Q569P9, Q80U37, Q8K383	Gene names	Srrm2, Kiaa0324
Domain Architecture	No domain graphic available
Description	Serine/arginine repetitive matrix protein 2.

TARA_HUMAN
θ value	0.813845 (rank : 325)	NC score	0.015513 (rank : 432)
Query Neighborhood Hits	431	Target Neighborhood Hits	1626	Shared Neighborhood Hits	69
SwissProt Accessions	Q9H2D6, O94797, Q2PZW8, Q2Q3Z9, Q2Q400, Q5R3M6, Q96DW1, Q9BT77, Q9BTL7, Q9BY98, Q9Y3L4	Gene names	TRIOBP, KIAA1662, TARA
Domain Architecture
Description	TRIO and F-actin-binding protein (Protein Tara) (Trio-associated repeat on actin).

ISL1_HUMAN
θ value	1.06291 (rank : 326)	NC score	0.401304 (rank : 266)
Query Neighborhood Hits	431	Target Neighborhood Hits	421	Shared Neighborhood Hits	303
SwissProt Accessions	P61371, P20663, P47894	Gene names	ISL1
Domain Architecture
Description	Insulin gene enhancer protein ISL-1 (Islet-1).

ISL1_MOUSE
θ value	1.06291 (rank : 327)	NC score	0.401304 (rank : 267)
Query Neighborhood Hits	431	Target Neighborhood Hits	421	Shared Neighborhood Hits	303
SwissProt Accessions	P61372, P20663, P47894, Q812D8	Gene names	Isl1
Domain Architecture
Description	Insulin gene enhancer protein ISL-1 (Islet-1).

OGFR_HUMAN
θ value	1.06291 (rank : 328)	NC score	0.050602 (rank : 385)
Query Neighborhood Hits	431	Target Neighborhood Hits	1582	Shared Neighborhood Hits	117
SwissProt Accessions	Q9NZT2, O96029, Q4VXW5, Q96CM2, Q9BQW1, Q9H4H0, Q9H7J5, Q9NZT3, Q9NZT4	Gene names	OGFR
Domain Architecture
Description	Opioid growth factor receptor (OGFr) (Zeta-type opioid receptor) (7-60 protein).

PBX2_HUMAN
θ value	1.06291 (rank : 329)	NC score	0.372566 (rank : 280)
Query Neighborhood Hits	431	Target Neighborhood Hits	350	Shared Neighborhood Hits	282
SwissProt Accessions	P40425	Gene names	PBX2, G17
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2) (Protein G17).

PBX2_MOUSE
θ value	1.06291 (rank : 330)	NC score	0.373677 (rank : 279)
Query Neighborhood Hits	431	Target Neighborhood Hits	341	Shared Neighborhood Hits	282
SwissProt Accessions	O35984	Gene names	Pbx2
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2).

ZN438_HUMAN
θ value	1.06291 (rank : 331)	NC score	-0.006582 (rank : 479)
Query Neighborhood Hits	431	Target Neighborhood Hits	906	Shared Neighborhood Hits	26
SwissProt Accessions	Q7Z4V0, Q5T426, Q658Q4, Q6ZN65	Gene names	ZNF438
Domain Architecture	No domain graphic available
Description	Zinc finger protein 438.

ALEX_HUMAN
θ value	1.38821 (rank : 332)	NC score	0.023607 (rank : 410)
Query Neighborhood Hits	431	Target Neighborhood Hits	361	Shared Neighborhood Hits	27
SwissProt Accessions	P84996	Gene names	GNAS, GNAS1
Domain Architecture	No domain graphic available
Description	Protein ALEX (Alternative gene product encoded by XL-exon).

COA2_HUMAN
θ value	1.38821 (rank : 333)	NC score	0.010922 (rank : 443)
Query Neighborhood Hits	431	Target Neighborhood Hits	184	Shared Neighborhood Hits	18
SwissProt Accessions	O00763, Q16852	Gene names	ACACB, ACC2, ACCB
Domain Architecture
Description	Acetyl-CoA carboxylase 2 (EC 6.4.1.2) (ACC-beta) [Includes: Biotin carboxylase (EC 6.3.4.14)].

DIDO1_HUMAN
θ value	1.38821 (rank : 334)	NC score	0.022189 (rank : 413)
Query Neighborhood Hits	431	Target Neighborhood Hits	960	Shared Neighborhood Hits	48
SwissProt Accessions	Q9BTC0, O15043, Q3ZTL7, Q3ZTL8, Q4VXS1, Q4VXS2, Q96D72, Q9BQW0, Q9BW03, Q9H4G6, Q9H4G7, Q9NTU8, Q9NUM8, Q9UFB6	Gene names	DIDO1, C20orf158, DATF1, KIAA0333
Domain Architecture
Description	Death-inducer obliterator 1 (DIO-1) (Death-associated transcription factor 1) (DATF-1) (hDido1).

ISL2_MOUSE
θ value	1.38821 (rank : 335)	NC score	0.403202 (rank : 265)
Query Neighborhood Hits	431	Target Neighborhood Hits	426	Shared Neighborhood Hits	299
SwissProt Accessions	Q9CXV0	Gene names	Isl2
Domain Architecture
Description	Insulin gene enhancer protein ISL-2 (Islet-2).

NUCL_HUMAN
θ value	1.38821 (rank : 336)	NC score	0.004359 (rank : 457)
Query Neighborhood Hits	431	Target Neighborhood Hits	415	Shared Neighborhood Hits	9
SwissProt Accessions	P19338, Q53SK1, Q8NB06	Gene names	NCL
Domain Architecture
Description	Nucleolin (Protein C23).

ONEC2_HUMAN
θ value	1.38821 (rank : 337)	NC score	0.082728 (rank : 356)
Query Neighborhood Hits	431	Target Neighborhood Hits	115	Shared Neighborhood Hits	71
SwissProt Accessions	O95948	Gene names	ONECUT2
Domain Architecture
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

PBX3_HUMAN
θ value	1.38821 (rank : 338)	NC score	0.351841 (rank : 288)
Query Neighborhood Hits	431	Target Neighborhood Hits	306	Shared Neighborhood Hits	272
SwissProt Accessions	P40426, Q96PF9, Q96PG0	Gene names	PBX3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PBX3_MOUSE
θ value	1.38821 (rank : 339)	NC score	0.351881 (rank : 287)
Query Neighborhood Hits	431	Target Neighborhood Hits	306	Shared Neighborhood Hits	272
SwissProt Accessions	O35317, Q925W2	Gene names	Pbx3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PI5PA_HUMAN
θ value	1.38821 (rank : 340)	NC score	0.031757 (rank : 396)
Query Neighborhood Hits	431	Target Neighborhood Hits	749	Shared Neighborhood Hits	69
SwissProt Accessions	Q15735, Q32M61, Q6ZTH6, Q8N902, Q9UDT9	Gene names	PIB5PA, PIPP
Domain Architecture
Description	Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC 3.1.3.56).

SC24A_MOUSE
θ value	1.38821 (rank : 341)	NC score	0.027097 (rank : 403)
Query Neighborhood Hits	431	Target Neighborhood Hits	394	Shared Neighborhood Hits	33
SwissProt Accessions	Q3U2P1, Q3TQ05, Q3TRG7, Q8BIS0	Gene names	Sec24a
Domain Architecture	No domain graphic available
Description	Protein transport protein Sec24A (SEC24-related protein A).

TF3C2_MOUSE
θ value	1.38821 (rank : 342)	NC score	0.016449 (rank : 429)
Query Neighborhood Hits	431	Target Neighborhood Hits	165	Shared Neighborhood Hits	7
SwissProt Accessions	Q8BL74, Q3U7Z9, Q80XQ7, Q8BJJ4, Q8BLP3, Q8K1J1, Q9CSS0, Q9CVE6, Q9DBK6	Gene names	Gtf3c2, Kiaa0011
Domain Architecture
Description	General transcription factor 3C polypeptide 2 (Transcription factor IIIC-subunit beta) (TF3C-beta) (TFIIIC 110 kDa subunit) (TFIIIC110).

CA104_HUMAN
θ value	1.81305 (rank : 343)	NC score	0.023772 (rank : 409)
Query Neighborhood Hits	431	Target Neighborhood Hits	15	Shared Neighborhood Hits	4
SwissProt Accessions	Q66K80, Q8NA07	Gene names	C1orf104
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C1orf104.

CABIN_HUMAN
θ value	1.81305 (rank : 344)	NC score	0.040997 (rank : 387)
Query Neighborhood Hits	431	Target Neighborhood Hits	490	Shared Neighborhood Hits	47
SwissProt Accessions	Q9Y6J0, Q9Y460	Gene names	CABIN1, KIAA0330
Domain Architecture
Description	Calcineurin-binding protein Cabin 1 (Calcineurin inhibitor) (CAIN).

CK060_MOUSE
θ value	1.81305 (rank : 345)	NC score	0.025879 (rank : 405)
Query Neighborhood Hits	431	Target Neighborhood Hits	17	Shared Neighborhood Hits	5
SwissProt Accessions	Q9DB07, Q91Z06, Q9JHT1	Gene names
Domain Architecture	No domain graphic available
Description	UPF0360 protein C11orf60 homolog.

CP007_MOUSE
θ value	1.81305 (rank : 346)	NC score	0.021618 (rank : 416)
Query Neighborhood Hits	431	Target Neighborhood Hits	231	Shared Neighborhood Hits	17
SwissProt Accessions	Q8C190, Q6PFD1	Gene names
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C16orf7 homolog (5-day ovary-specific transcript 1 protein).

NCOA6_HUMAN
θ value	1.81305 (rank : 347)	NC score	0.026360 (rank : 404)
Query Neighborhood Hits	431	Target Neighborhood Hits	1202	Shared Neighborhood Hits	80
SwissProt Accessions	Q14686, Q9NTZ9, Q9UH74, Q9UK86	Gene names	NCOA6, AIB3, KIAA0181, RAP250, TRBP
Domain Architecture	No domain graphic available
Description	Nuclear receptor coactivator 6 (Amplified in breast cancer protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (PPAR-interacting protein) (PRIP) (Nuclear receptor-activating protein, 250 kDa) (Nuclear receptor coactivator RAP250) (NRC RAP250) (Thyroid hormone receptor-binding protein).

ONEC2_MOUSE
θ value	1.81305 (rank : 348)	NC score	0.079308 (rank : 361)
Query Neighborhood Hits	431	Target Neighborhood Hits	123	Shared Neighborhood Hits	71
SwissProt Accessions	Q6XBJ3	Gene names	Onecut2, Oc2
Domain Architecture	No domain graphic available
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

PO5F1_MOUSE
θ value	1.81305 (rank : 349)	NC score	0.284982 (rank : 319)
Query Neighborhood Hits	431	Target Neighborhood Hits	305	Shared Neighborhood Hits	256
SwissProt Accessions	P20263, Q63843	Gene names	Pou5f1, Oct-3, Oct-4, Otf-3, Otf3
Domain Architecture
Description	POU domain, class 5, transcription factor 1 (Octamer-binding transcription factor 3) (Oct-3) (Oct-4) (NF-A3).

POT14_HUMAN
θ value	1.81305 (rank : 350)	NC score	-0.002052 (rank : 473)
Query Neighborhood Hits	431	Target Neighborhood Hits	403	Shared Neighborhood Hits	6
SwissProt Accessions	Q6S5H5, Q6S5H6, Q6S8J2	Gene names	POTE14
Domain Architecture	No domain graphic available
Description	Prostate, ovary, testis-expressed protein on chromosome 14.

RGS3_MOUSE
θ value	1.81305 (rank : 351)	NC score	0.020740 (rank : 419)
Query Neighborhood Hits	431	Target Neighborhood Hits	1621	Shared Neighborhood Hits	90
SwissProt Accessions	Q9DC04, Q5SRB1, Q5SRB4, Q5SRB8, Q8CEE3, Q8VI25, Q925G9, Q9JL22, Q9JL23, Q9QXA2	Gene names	Rgs3
Domain Architecture
Description	Regulator of G-protein signaling 3 (RGS3) (C2PA).

CBL_MOUSE
θ value	2.36792 (rank : 352)	NC score	0.008003 (rank : 450)
Query Neighborhood Hits	431	Target Neighborhood Hits	426	Shared Neighborhood Hits	21
SwissProt Accessions	P22682, Q8CEA1	Gene names	Cbl
Domain Architecture
Description	E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto- oncogene).

HOMEZ_MOUSE
θ value	2.36792 (rank : 353)	NC score	0.031987 (rank : 394)
Query Neighborhood Hits	431	Target Neighborhood Hits	61	Shared Neighborhood Hits	19
SwissProt Accessions	Q80W88	Gene names	Homez, Kiaa1443
Domain Architecture
Description	Homeobox and leucine zipper protein Homez (Homeodomain leucine zipper- containing factor).

MAML1_HUMAN
θ value	2.36792 (rank : 354)	NC score	0.018936 (rank : 425)
Query Neighborhood Hits	431	Target Neighborhood Hits	228	Shared Neighborhood Hits	22
SwissProt Accessions	Q92585, Q9NZ12	Gene names	MAML1, KIAA0200
Domain Architecture	No domain graphic available
Description	Mastermind-like protein 1 (Mam-1).

PO3F3_HUMAN
θ value	2.36792 (rank : 355)	NC score	0.300992 (rank : 308)
Query Neighborhood Hits	431	Target Neighborhood Hits	311	Shared Neighborhood Hits	265
SwissProt Accessions	P20264, P78379	Gene names	POU3F3, BRN1, OTF8
Domain Architecture
Description	POU domain, class 3, transcription factor 3 (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein).

PO3F3_MOUSE
θ value	2.36792 (rank : 356)	NC score	0.301009 (rank : 307)
Query Neighborhood Hits	431	Target Neighborhood Hits	308	Shared Neighborhood Hits	265
SwissProt Accessions	P31361	Gene names	Pou3f3, Brn-1, Brn1, Otf8
Domain Architecture
Description	POU domain, class 3, transcription factor 3 (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein).

PO5F1_HUMAN
θ value	2.36792 (rank : 357)	NC score	0.272413 (rank : 320)
Query Neighborhood Hits	431	Target Neighborhood Hits	321	Shared Neighborhood Hits	266
SwissProt Accessions	Q01860, P31359, Q15167, Q15168, Q16422	Gene names	POU5F1, OCT3, OCT4, OTF3
Domain Architecture
Description	POU domain, class 5, transcription factor 1 (Octamer-binding transcription factor 3) (Oct-3) (Oct-4).

RAVR2_MOUSE
θ value	2.36792 (rank : 358)	NC score	0.009135 (rank : 448)
Query Neighborhood Hits	431	Target Neighborhood Hits	137	Shared Neighborhood Hits	6
SwissProt Accessions	Q7TPD6	Gene names	Raver2, Kiaa1579
Domain Architecture	No domain graphic available
Description	Ribonucleoprotein PTB-binding 2 (Protein raver-2).

SYN3_MOUSE
θ value	2.36792 (rank : 359)	NC score	0.018064 (rank : 427)
Query Neighborhood Hits	431	Target Neighborhood Hits	200	Shared Neighborhood Hits	29
SwissProt Accessions	Q8JZP2	Gene names	Syn3
Domain Architecture	No domain graphic available
Description	Synapsin-3 (Synapsin III).

TULP4_HUMAN
θ value	2.36792 (rank : 360)	NC score	0.013821 (rank : 436)
Query Neighborhood Hits	431	Target Neighborhood Hits	426	Shared Neighborhood Hits	31
SwissProt Accessions	Q9NRJ4, Q9HD22, Q9P2F0	Gene names	TULP4, KIAA1397, TUSP
Domain Architecture
Description	Tubby-like protein 4 (Tubby superfamily protein).

BSN_MOUSE
θ value	3.0926 (rank : 361)	NC score	0.030439 (rank : 400)
Query Neighborhood Hits	431	Target Neighborhood Hits	2057	Shared Neighborhood Hits	111
SwissProt Accessions	O88737, Q6ZQB5	Gene names	Bsn, Kiaa0434
Domain Architecture	No domain graphic available
Description	Protein bassoon.

FMN2_MOUSE
θ value	3.0926 (rank : 362)	NC score	0.030651 (rank : 399)
Query Neighborhood Hits	431	Target Neighborhood Hits	349	Shared Neighborhood Hits	36
SwissProt Accessions	Q9JL04	Gene names	Fmn2
Domain Architecture
Description	Formin-2.

LDB2_MOUSE
θ value	3.0926 (rank : 363)	NC score	0.011818 (rank : 441)
Query Neighborhood Hits	431	Target Neighborhood Hits	10	Shared Neighborhood Hits	5
SwissProt Accessions	O55203, O55205, Q6AXE6	Gene names	Ldb2, Clim1
Domain Architecture	No domain graphic available
Description	LIM domain-binding protein 2 (Carboxyl-terminal LIM domain-binding protein 1) (CLIM-1) (LIM-domain-binding factor CLIM1).

MAGD4_HUMAN
θ value	3.0926 (rank : 364)	NC score	0.007653 (rank : 451)
Query Neighborhood Hits	431	Target Neighborhood Hits	338	Shared Neighborhood Hits	31
SwissProt Accessions	Q96JG8, Q8WXW4, Q9BQ84, Q9BYH3, Q9BYH4	Gene names	MAGED4, KIAA1859, MAGEE1
Domain Architecture
Description	Melanoma-associated antigen D4 (MAGE-D4 antigen) (MAGE-E1 antigen).

MYO9B_HUMAN
θ value	3.0926 (rank : 365)	NC score	0.000027 (rank : 468)
Query Neighborhood Hits	431	Target Neighborhood Hits	641	Shared Neighborhood Hits	29
SwissProt Accessions	Q13459, O75314, Q9NUJ2, Q9UHN0	Gene names	MYO9B, MYR5
Domain Architecture
Description	Myosin-9B (Myosin IXb) (Unconventional myosin-9b).

NFIX_HUMAN
θ value	3.0926 (rank : 366)	NC score	0.010907 (rank : 444)
Query Neighborhood Hits	431	Target Neighborhood Hits	38	Shared Neighborhood Hits	8
SwissProt Accessions	Q14938, O60413, Q12859, Q13050, Q13052, Q9UPH1, Q9Y6R8	Gene names	NFIX
Domain Architecture
Description	Nuclear factor 1 X-type (Nuclear factor 1/X) (NF1-X) (NFI-X) (NF-I/X) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein).

NFIX_MOUSE
θ value	3.0926 (rank : 367)	NC score	0.010878 (rank : 445)
Query Neighborhood Hits	431	Target Neighborhood Hits	35	Shared Neighborhood Hits	7
SwissProt Accessions	P70257, O08519, P70258, Q64192, Q99L78, Q9R1G2	Gene names	Nfix
Domain Architecture
Description	Nuclear factor 1 X-type (Nuclear factor 1/X) (NF1-X) (NFI-X) (NF-I/X) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein).

PBX1_HUMAN
θ value	3.0926 (rank : 368)	NC score	0.343362 (rank : 289)
Query Neighborhood Hits	431	Target Neighborhood Hits	317	Shared Neighborhood Hits	276
SwissProt Accessions	P40424	Gene names	PBX1, PRL
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1) (Homeobox protein PRL).

PBX1_MOUSE
θ value	3.0926 (rank : 369)	NC score	0.343362 (rank : 290)
Query Neighborhood Hits	431	Target Neighborhood Hits	317	Shared Neighborhood Hits	276
SwissProt Accessions	P41778	Gene names	Pbx1, Pbx-1
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1).

PO3F2_HUMAN
θ value	3.0926 (rank : 370)	NC score	0.296333 (rank : 314)
Query Neighborhood Hits	431	Target Neighborhood Hits	308	Shared Neighborhood Hits	269
SwissProt Accessions	P20265, Q14960, Q86V54, Q9UJL0	Gene names	POU3F2, BRN2, OCT7, OTF7
Domain Architecture
Description	POU domain, class 3, transcription factor 2 (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2).

PO3F2_MOUSE
θ value	3.0926 (rank : 371)	NC score	0.296339 (rank : 313)
Query Neighborhood Hits	431	Target Neighborhood Hits	313	Shared Neighborhood Hits	269
SwissProt Accessions	P31360	Gene names	Pou3f2, Brn-2, Brn2, Otf7
Domain Architecture
Description	POU domain, class 3, transcription factor 2 (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2).

REM1_HUMAN
θ value	3.0926 (rank : 372)	NC score	-0.004471 (rank : 477)
Query Neighborhood Hits	431	Target Neighborhood Hits	247	Shared Neighborhood Hits	3
SwissProt Accessions	O75628, Q9NP57	Gene names	REM1, GES, REM
Domain Architecture
Description	GTP-binding protein REM 1 (Rad and Gem-like GTP-binding protein 1) (GTPase-regulating endothelial cell sprouting).

RTP3_MOUSE
θ value	3.0926 (rank : 373)	NC score	0.019776 (rank : 423)
Query Neighborhood Hits	431	Target Neighborhood Hits	374	Shared Neighborhood Hits	29
SwissProt Accessions	Q5QGU6, Q8VDC2	Gene names	Rtp3, Tmem7
Domain Architecture	No domain graphic available
Description	Receptor-transporting protein 3 (Transmembrane protein 7).

TBX18_MOUSE
θ value	3.0926 (rank : 374)	NC score	0.001144 (rank : 466)
Query Neighborhood Hits	431	Target Neighborhood Hits	58	Shared Neighborhood Hits	6
SwissProt Accessions	Q9EPZ6	Gene names	Tbx18
Domain Architecture
Description	T-box transcription factor TBX18 (T-box protein 18).

TTLL5_HUMAN
θ value	3.0926 (rank : 375)	NC score	0.018938 (rank : 424)
Query Neighborhood Hits	431	Target Neighborhood Hits	141	Shared Neighborhood Hits	11
SwissProt Accessions	Q6EMB2, Q9P1V5, Q9UPZ4	Gene names	TTLL5, KIAA0998, STAMP
Domain Architecture	No domain graphic available
Description	Tubulin--tyrosine ligase-like protein 5 (SRC1 and TIF2-associated modulatory protein).

CCAR1_HUMAN
θ value	4.03905 (rank : 376)	NC score	0.002669 (rank : 461)
Query Neighborhood Hits	431	Target Neighborhood Hits	444	Shared Neighborhood Hits	11
SwissProt Accessions	Q8IX12, Q32NE3, Q5VUP6, Q6PIZ0, Q6X935, Q9H8N4, Q9NVA7, Q9NVQ0, Q9NWM6	Gene names	CCAR1, CARP1, DIS
Domain Architecture	No domain graphic available
Description	Cell division cycle and apoptosis regulator protein 1 (Cell cycle and apoptosis regulatory protein 1) (CARP-1) (Death inducer with SAP domain).

DPOE1_MOUSE
θ value	4.03905 (rank : 377)	NC score	0.009239 (rank : 447)
Query Neighborhood Hits	431	Target Neighborhood Hits	24	Shared Neighborhood Hits	3
SwissProt Accessions	Q9WVF7, Q9QX50	Gene names	Pole, Pole1
Domain Architecture
Description	DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A).

EP400_MOUSE
θ value	4.03905 (rank : 378)	NC score	0.011217 (rank : 442)
Query Neighborhood Hits	431	Target Neighborhood Hits	592	Shared Neighborhood Hits	47
SwissProt Accessions	Q8CHI8, Q80TC8, Q8BXI5, Q8BYW3, Q8C0P6, Q8CHI7, Q8VDF4, Q9DA54	Gene names	Ep400, Kiaa1498
Domain Architecture	No domain graphic available
Description	E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa SWI2/SNF2-related protein) (Domino homolog) (mDomino).

HIRP3_HUMAN
θ value	4.03905 (rank : 379)	NC score	0.014160 (rank : 434)
Query Neighborhood Hits	431	Target Neighborhood Hits	323	Shared Neighborhood Hits	14
SwissProt Accessions	Q9BW71, O75707, O75708	Gene names	HIRIP3
Domain Architecture	No domain graphic available
Description	HIRA-interacting protein 3.

MARK2_MOUSE
θ value	4.03905 (rank : 380)	NC score	-0.015645 (rank : 483)
Query Neighborhood Hits	431	Target Neighborhood Hits	1018	Shared Neighborhood Hits	19
SwissProt Accessions	Q05512, Q6PDR4, Q8BR95	Gene names	Mark2, Emk
Domain Architecture
Description	Serine/threonine-protein kinase MARK2 (EC 2.7.11.1) (MAP/microtubule affinity-regulating kinase 2) (ELKL Motif Kinase) (EMK1).

PO3F4_HUMAN
θ value	4.03905 (rank : 381)	NC score	0.253876 (rank : 324)
Query Neighborhood Hits	431	Target Neighborhood Hits	297	Shared Neighborhood Hits	238
SwissProt Accessions	P49335, Q5H9G9, Q99410	Gene names	POU3F4, BRN4, OTF9
Domain Architecture
Description	POU domain, class 3, transcription factor 4 (Brain-specific homeobox/POU domain protein 4) (Brain-4) (Brn-4).

PO3F4_MOUSE
θ value	4.03905 (rank : 382)	NC score	0.254883 (rank : 323)
Query Neighborhood Hits	431	Target Neighborhood Hits	281	Shared Neighborhood Hits	236
SwissProt Accessions	P62515, P25216	Gene names	Pou3f4, Brn-4, Brn4, Otf9
Domain Architecture	No domain graphic available
Description	POU domain, class 3, transcription factor 4 (Brain-specific homeobox/POU domain protein 4) (Brain-4) (Brn-4).

PO4F1_HUMAN
θ value	4.03905 (rank : 383)	NC score	0.321794 (rank : 298)
Query Neighborhood Hits	431	Target Neighborhood Hits	342	Shared Neighborhood Hits	283
SwissProt Accessions	Q01851, Q14986, Q15318	Gene names	POU4F1, BRN3A, RDC1
Domain Architecture
Description	POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Oct-T1) (Homeobox/POU domain protein RDC-1).

PO4F1_MOUSE
θ value	4.03905 (rank : 384)	NC score	0.325067 (rank : 296)
Query Neighborhood Hits	431	Target Neighborhood Hits	345	Shared Neighborhood Hits	283
SwissProt Accessions	P17208	Gene names	Pou4f1, Brn-3, Brn3, Brn3a
Domain Architecture
Description	POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Brn-3.0).

SIX6_HUMAN
θ value	4.03905 (rank : 385)	NC score	0.304045 (rank : 306)
Query Neighborhood Hits	431	Target Neighborhood Hits	269	Shared Neighborhood Hits	237
SwissProt Accessions	O95475, Q9P1X8	Gene names	SIX6, OPTX2, SIX9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Homeodomain protein OPTX2).

SIX6_MOUSE
θ value	4.03905 (rank : 386)	NC score	0.297757 (rank : 310)
Query Neighborhood Hits	431	Target Neighborhood Hits	267	Shared Neighborhood Hits	238
SwissProt Accessions	Q9QZ28, O88423	Gene names	Six6, Optx2, Six9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Six9 protein).

SYNJ1_MOUSE
θ value	4.03905 (rank : 387)	NC score	0.019866 (rank : 422)
Query Neighborhood Hits	431	Target Neighborhood Hits	516	Shared Neighborhood Hits	48
SwissProt Accessions	Q8CHC4	Gene names	Synj1, Kiaa0910
Domain Architecture
Description	Synaptojanin-1 (EC 3.1.3.36) (Synaptic inositol-1,4,5-trisphosphate 5- phosphatase 1).

ATX2_MOUSE
θ value	5.27518 (rank : 388)	NC score	0.022049 (rank : 414)
Query Neighborhood Hits	431	Target Neighborhood Hits	445	Shared Neighborhood Hits	46
SwissProt Accessions	O70305, P97421	Gene names	Atxn2, Atx2, Sca2
Domain Architecture	No domain graphic available
Description	Ataxin-2 (Spinocerebellar ataxia type 2 protein homolog).

CHD1_MOUSE
θ value	5.27518 (rank : 389)	NC score	0.001257 (rank : 465)
Query Neighborhood Hits	431	Target Neighborhood Hits	266	Shared Neighborhood Hits	11
SwissProt Accessions	P40201	Gene names	Chd1, Chd-1
Domain Architecture
Description	Chromodomain-helicase-DNA-binding protein 1 (EC 3.6.1.-) (ATP- dependent helicase CHD1) (CHD-1).

CK060_HUMAN
θ value	5.27518 (rank : 390)	NC score	0.021074 (rank : 418)
Query Neighborhood Hits	431	Target Neighborhood Hits	20	Shared Neighborhood Hits	5
SwissProt Accessions	Q9NQC8	Gene names	C11orf60, C11orf2
Domain Architecture	No domain graphic available
Description	UPF0360 protein C11orf60.

DACT1_HUMAN
θ value	5.27518 (rank : 391)	NC score	0.015923 (rank : 431)
Query Neighborhood Hits	431	Target Neighborhood Hits	228	Shared Neighborhood Hits	23
SwissProt Accessions	Q9NYF0, Q86TY0	Gene names	DACT1, DPR1, HNG3
Domain Architecture	No domain graphic available
Description	Dapper homolog 1 (hDPR1) (Heptacellular carcinoma novel gene 3 protein).

EPHB6_HUMAN
θ value	5.27518 (rank : 392)	NC score	-0.011457 (rank : 482)
Query Neighborhood Hits	431	Target Neighborhood Hits	912	Shared Neighborhood Hits	12
SwissProt Accessions	O15197	Gene names	EPHB6
Domain Architecture
Description	Ephrin type-B receptor 6 precursor (Tyrosine-protein kinase-defective receptor EPH-6) (HEP).

EPN3_HUMAN
θ value	5.27518 (rank : 393)	NC score	0.007483 (rank : 453)
Query Neighborhood Hits	431	Target Neighborhood Hits	197	Shared Neighborhood Hits	18
SwissProt Accessions	Q9H201, Q9BVN6, Q9NWK2	Gene names	EPN3
Domain Architecture
Description	Epsin-3 (EPS-15-interacting protein 3).

HOP_MOUSE
θ value	5.27518 (rank : 394)	NC score	0.328928 (rank : 294)
Query Neighborhood Hits	431	Target Neighborhood Hits	102	Shared Neighborhood Hits	93
SwissProt Accessions	Q8R1H0, Q8C1N5, Q8CJ22	Gene names	Hop, Hod, Ob1
Domain Architecture	No domain graphic available
Description	Homeodomain-only protein (Homeobox-only protein) (Odd homeobox protein 1) (mOB1).

K1802_HUMAN
θ value	5.27518 (rank : 395)	NC score	0.018456 (rank : 426)
Query Neighborhood Hits	431	Target Neighborhood Hits	1378	Shared Neighborhood Hits	68
SwissProt Accessions	Q96JM3, Q6P181, Q8NC88, Q9BST0	Gene names	KIAA1802, C13orf8
Domain Architecture	No domain graphic available
Description	Zinc finger protein KIAA1802.

LDB2_HUMAN
θ value	5.27518 (rank : 396)	NC score	0.009006 (rank : 449)
Query Neighborhood Hits	431	Target Neighborhood Hits	11	Shared Neighborhood Hits	3
SwissProt Accessions	O43679	Gene names	LDB2, CLIM1
Domain Architecture	No domain graphic available
Description	LIM domain-binding protein 2 (Carboxyl-terminal LIM domain-binding protein 1) (CLIM-1) (LIM domain-binding factor CLIM1).

NCOR2_MOUSE
θ value	5.27518 (rank : 397)	NC score	0.009636 (rank : 446)
Query Neighborhood Hits	431	Target Neighborhood Hits	790	Shared Neighborhood Hits	40
SwissProt Accessions	Q9WU42, Q9WU43, Q9WUC1	Gene names	Ncor2, Smrt
Domain Architecture
Description	Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor- associating factor) (TRAC).

SIX3_HUMAN
θ value	5.27518 (rank : 398)	NC score	0.296812 (rank : 311)
Query Neighborhood Hits	431	Target Neighborhood Hits	285	Shared Neighborhood Hits	250
SwissProt Accessions	O95343	Gene names	SIX3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SIX3_MOUSE
θ value	5.27518 (rank : 399)	NC score	0.296757 (rank : 312)
Query Neighborhood Hits	431	Target Neighborhood Hits	289	Shared Neighborhood Hits	250
SwissProt Accessions	Q62233, P70176, P70177	Gene names	Six3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SON_MOUSE
θ value	5.27518 (rank : 400)	NC score	0.013190 (rank : 437)
Query Neighborhood Hits	431	Target Neighborhood Hits	957	Shared Neighborhood Hits	52
SwissProt Accessions	Q9QX47, Q9CQ12, Q9CQK6, Q9QXP5	Gene names	Son
Domain Architecture
Description	SON protein.

UBP6_HUMAN
θ value	5.27518 (rank : 401)	NC score	-0.000241 (rank : 470)
Query Neighborhood Hits	431	Target Neighborhood Hits	188	Shared Neighborhood Hits	10
SwissProt Accessions	P35125, Q15634, Q86WP6, Q8IWT4	Gene names	USP6, TRE2
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 6 (EC 3.1.2.15) (Ubiquitin thioesterase 6) (Ubiquitin-specific-processing protease 6) (Deubiquitinating enzyme 6) (Proto-oncogene TRE-2).

ZHX1_MOUSE
θ value	5.27518 (rank : 402)	NC score	0.205645 (rank : 329)
Query Neighborhood Hits	431	Target Neighborhood Hits	334	Shared Neighborhood Hits	213
SwissProt Accessions	P70121, Q8BQ68, Q8C6T4, Q8CJG3	Gene names	Zhx1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

ZHX2_HUMAN
θ value	5.27518 (rank : 403)	NC score	0.192946 (rank : 331)
Query Neighborhood Hits	431	Target Neighborhood Hits	347	Shared Neighborhood Hits	186
SwissProt Accessions	Q9Y6X8	Gene names	ZHX2, AFR1, KIAA0854, RAF
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

ZRAB2_HUMAN
θ value	5.27518 (rank : 404)	NC score	0.012278 (rank : 440)
Query Neighborhood Hits	431	Target Neighborhood Hits	120	Shared Neighborhood Hits	6
SwissProt Accessions	O95218, Q9UP63	Gene names	ZRANB2, ZIS, ZNF265
Domain Architecture
Description	Zinc finger Ran-binding domain-containing protein 2 Zinc finger protein 265 (Zinc finger, splicing).

ATRX_HUMAN
θ value	6.88961 (rank : 405)	NC score	0.001958 (rank : 463)
Query Neighborhood Hits	431	Target Neighborhood Hits	842	Shared Neighborhood Hits	24
SwissProt Accessions	P46100, P51068, Q15886, Q59FB5, Q59H31, Q5H9A2, Q5JWI4, Q7Z2J1, Q9H0Z1, Q9NTS3	Gene names	ATRX, RAD54L, XH2
Domain Architecture
Description	Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) (Znf- HX).

CTND2_HUMAN
θ value	6.88961 (rank : 406)	NC score	0.013899 (rank : 435)
Query Neighborhood Hits	431	Target Neighborhood Hits	333	Shared Neighborhood Hits	42
SwissProt Accessions	Q9UQB3, O00379, O15390, O43206, O43840, Q13589, Q9UM66, Q9UPM3	Gene names	CTNND2, NPRAP
Domain Architecture
Description	Catenin delta-2 (Delta-catenin) (Neural plakophilin-related ARM-repeat protein) (NPRAP) (Neurojungin) (GT24).

HNF1A_MOUSE
θ value	6.88961 (rank : 407)	NC score	0.054172 (rank : 383)
Query Neighborhood Hits	431	Target Neighborhood Hits	212	Shared Neighborhood Hits	48
SwissProt Accessions	P22361	Gene names	Tcf1, Hnf-1, Hnf-1a, Hnf1a
Domain Architecture
Description	Hepatocyte nuclear factor 1-alpha (HNF-1A) (Liver-specific transcription factor LF-B1) (LFB1).

LEO1_HUMAN
θ value	6.88961 (rank : 408)	NC score	-0.000066 (rank : 469)
Query Neighborhood Hits	431	Target Neighborhood Hits	958	Shared Neighborhood Hits	36
SwissProt Accessions	Q8WVC0, Q96N99	Gene names	LEO1, RDL
Domain Architecture	No domain graphic available
Description	RNA polymerase-associated protein LEO1 (Replicative senescence down- regulated leo1-like protein).

MILK1_MOUSE
θ value	6.88961 (rank : 409)	NC score	0.022924 (rank : 411)
Query Neighborhood Hits	431	Target Neighborhood Hits	788	Shared Neighborhood Hits	71
SwissProt Accessions	Q8BGT6, Q8BJ60	Gene names	Mirab13, D15Mit260, Kiaa1668
Domain Architecture
Description	Molecule interacting with Rab13 (MIRab13) (MICAL-like protein 1).

NF2L1_MOUSE
θ value	6.88961 (rank : 410)	NC score	0.004063 (rank : 458)
Query Neighborhood Hits	431	Target Neighborhood Hits	185	Shared Neighborhood Hits	8
SwissProt Accessions	Q61985, O70234	Gene names	Nfe2l1, Nrf1
Domain Architecture
Description	Nuclear factor erythroid 2-related factor 1 (NF-E2-related factor 1) (NFE2-related factor 1) (Nuclear factor, erythroid derived 2, like 1).

NUCL_MOUSE
θ value	6.88961 (rank : 411)	NC score	0.001820 (rank : 464)
Query Neighborhood Hits	431	Target Neighborhood Hits	425	Shared Neighborhood Hits	12
SwissProt Accessions	P09405, Q548M9, Q61991, Q99K50	Gene names	Ncl, Nuc
Domain Architecture
Description	Nucleolin (Protein C23).

PGCA_HUMAN
θ value	6.88961 (rank : 412)	NC score	0.000908 (rank : 467)
Query Neighborhood Hits	431	Target Neighborhood Hits	821	Shared Neighborhood Hits	31
SwissProt Accessions	P16112, Q13650, Q9UCP4, Q9UCP5, Q9UDE0	Gene names	AGC1, CSPG1
Domain Architecture
Description	Aggrecan core protein precursor (Cartilage-specific proteoglycan core protein) (CSPCP) (Chondroitin sulfate proteoglycan core protein 1) [Contains: Aggrecan core protein 2].

PO3F1_HUMAN
θ value	6.88961 (rank : 413)	NC score	0.266376 (rank : 322)
Query Neighborhood Hits	431	Target Neighborhood Hits	256	Shared Neighborhood Hits	234
SwissProt Accessions	Q03052	Gene names	POU3F1, OCT6, OTF6
Domain Architecture
Description	POU domain, class 3, transcription factor 1 (Octamer-binding transcription factor 6) (Oct-6) (POU-domain transcription factor SCIP).

PO3F1_MOUSE
θ value	6.88961 (rank : 414)	NC score	0.269413 (rank : 321)
Query Neighborhood Hits	431	Target Neighborhood Hits	261	Shared Neighborhood Hits	234
SwissProt Accessions	P21952	Gene names	Pou3f1, Oct6, Otf-6, Otf6, Scip
Domain Architecture
Description	POU domain, class 3, transcription factor 1 (Octamer-binding transcription factor 6) (Oct-6) (POU-domain transcription factor SCIP).

SALL1_MOUSE
θ value	6.88961 (rank : 415)	NC score	-0.011428 (rank : 481)
Query Neighborhood Hits	431	Target Neighborhood Hits	826	Shared Neighborhood Hits	24
SwissProt Accessions	Q9ER74, Q920R5	Gene names	Sall1, Sal3
Domain Architecture
Description	Sal-like protein 1 (Zinc finger protein Spalt-3) (Sal-3) (MSal-3).

CRTC1_MOUSE
θ value	8.99809 (rank : 416)	NC score	0.014605 (rank : 433)
Query Neighborhood Hits	431	Target Neighborhood Hits	230	Shared Neighborhood Hits	32
SwissProt Accessions	Q68ED7, Q6ZQ85	Gene names	Crtc1, Kiaa0616, Mect1
Domain Architecture	No domain graphic available
Description	CREB-regulated transcription coactivator 1 (Mucoepidermoid carcinoma translocated protein 1 homolog).

CSF1_HUMAN
θ value	8.99809 (rank : 417)	NC score	0.006220 (rank : 454)
Query Neighborhood Hits	431	Target Neighborhood Hits	258	Shared Neighborhood Hits	20
SwissProt Accessions	P09603, Q13130, Q14086, Q14806, Q9UQR8	Gene names	CSF1
Domain Architecture
Description	Macrophage colony-stimulating factor 1 precursor (CSF-1) (MCSF) (M- CSF) (Lanimostim).

EFC2_HUMAN
θ value	8.99809 (rank : 418)	NC score	0.005294 (rank : 456)
Query Neighborhood Hits	431	Target Neighborhood Hits	19	Shared Neighborhood Hits	3
SwissProt Accessions	P60608	Gene names
Domain Architecture	No domain graphic available
Description	HERV-F(c)2_7q36.2 provirus ancestral Env polyprotein (Envelope polyprotein) (Fc2deltaenv) [Includes: Surface protein (SU); Truncated transmembrane protein (TM)].

FGD6_MOUSE
θ value	8.99809 (rank : 419)	NC score	-0.002176 (rank : 474)
Query Neighborhood Hits	431	Target Neighborhood Hits	282	Shared Neighborhood Hits	12
SwissProt Accessions	Q69ZL1, Q8C8W5, Q8K3B0, Q9D3Y7	Gene names	Fgd6, Kiaa1362
Domain Architecture	No domain graphic available
Description	FYVE, RhoGEF and PH domain-containing protein 6.

G3BP2_MOUSE
θ value	8.99809 (rank : 420)	NC score	-0.001384 (rank : 472)
Query Neighborhood Hits	431	Target Neighborhood Hits	258	Shared Neighborhood Hits	10
SwissProt Accessions	P97379, Q9R1B8	Gene names	G3bp2
Domain Architecture
Description	Ras-GTPase-activating protein-binding protein 2 (GAP SH3-domain- binding protein 2) (G3BP-2).

HMBX1_HUMAN
θ value	8.99809 (rank : 421)	NC score	0.189970 (rank : 332)
Query Neighborhood Hits	431	Target Neighborhood Hits	118	Shared Neighborhood Hits	101
SwissProt Accessions	Q6NT76, Q3Y6P1, Q96GS5, Q9H701	Gene names	HMBOX1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

HS90B_HUMAN
θ value	8.99809 (rank : 422)	NC score	0.003674 (rank : 459)
Query Neighborhood Hits	431	Target Neighborhood Hits	98	Shared Neighborhood Hits	8
SwissProt Accessions	P08238, Q5T9W7, Q9NQW0	Gene names	HSP90AB1, HSP90B, HSPC2, HSPCB
Domain Architecture
Description	Heat shock protein HSP 90-beta (HSP 84) (HSP 90).

HTSF1_HUMAN
θ value	8.99809 (rank : 423)	NC score	-0.002489 (rank : 476)
Query Neighborhood Hits	431	Target Neighborhood Hits	408	Shared Neighborhood Hits	9
SwissProt Accessions	O43719, Q59G06, Q99730	Gene names	HTATSF1
Domain Architecture	No domain graphic available
Description	HIV Tat-specific factor 1 (Tat-SF1).

PCDA7_HUMAN
θ value	8.99809 (rank : 424)	NC score	-0.006221 (rank : 478)
Query Neighborhood Hits	431	Target Neighborhood Hits	221	Shared Neighborhood Hits	5
SwissProt Accessions	Q9UN72, O75282	Gene names	PCDHA7
Domain Architecture
Description	Protocadherin alpha 7 precursor (PCDH-alpha7).

PTN22_MOUSE
θ value	8.99809 (rank : 425)	NC score	-0.001265 (rank : 471)
Query Neighborhood Hits	431	Target Neighborhood Hits	179	Shared Neighborhood Hits	12
SwissProt Accessions	P29352, Q7TMP9	Gene names	Ptpn22, Ptpn8
Domain Architecture
Description	Tyrosine-protein phosphatase non-receptor type 22 (EC 3.1.3.48) (Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP).

ROCK2_HUMAN
θ value	8.99809 (rank : 426)	NC score	-0.021130 (rank : 484)
Query Neighborhood Hits	431	Target Neighborhood Hits	2073	Shared Neighborhood Hits	18
SwissProt Accessions	O75116, Q9UQN5	Gene names	ROCK2, KIAA0619
Domain Architecture
Description	Rho-associated protein kinase 2 (EC 2.7.11.1) (Rho-associated, coiled- coil-containing protein kinase 2) (p164 ROCK-2) (Rho kinase 2).

RUNX3_HUMAN
θ value	8.99809 (rank : 427)	NC score	0.002745 (rank : 460)
Query Neighborhood Hits	431	Target Neighborhood Hits	96	Shared Neighborhood Hits	9
SwissProt Accessions	Q13761, Q12969, Q13760	Gene names	RUNX3, AML2, CBFA3, PEBP2A3
Domain Architecture
Description	Runt-related transcription factor 3 (Core-binding factor, alpha 3 subunit) (CBF-alpha 3) (Acute myeloid leukemia 2 protein) (Oncogene AML-2) (Polyomavirus enhancer-binding protein 2 alpha C subunit) (PEBP2-alpha C) (PEA2-alpha C) (SL3-3 enhancer factor 1 alpha C subunit) (SL3/AKV core-binding factor alpha C subunit).

SRBS1_MOUSE
θ value	8.99809 (rank : 428)	NC score	0.002281 (rank : 462)
Query Neighborhood Hits	431	Target Neighborhood Hits	409	Shared Neighborhood Hits	17
SwissProt Accessions	Q62417, Q80TF8, Q8BZI3, Q8K3Y2, Q921F8, Q9Z0Z8, Q9Z0Z9	Gene names	Sorbs1, Kiaa1296, Sh3d5
Domain Architecture	No domain graphic available
Description	Sorbin and SH3 domain-containing protein 1 (Ponsin) (c-Cbl-associated protein) (CAP) (SH3 domain protein 5) (SH3P12).

TACC2_HUMAN
θ value	8.99809 (rank : 429)	NC score	-0.002188 (rank : 475)
Query Neighborhood Hits	431	Target Neighborhood Hits	856	Shared Neighborhood Hits	33
SwissProt Accessions	O95359, Q9NZ41, Q9NZR5	Gene names	TACC2
Domain Architecture
Description	Transforming acidic coiled-coil-containing protein 2 (Anti Zuai-1) (AZU-1).

ZHX1_HUMAN
θ value	8.99809 (rank : 430)	NC score	0.198858 (rank : 330)
Query Neighborhood Hits	431	Target Neighborhood Hits	307	Shared Neighborhood Hits	205
SwissProt Accessions	Q9UKY1, Q8IWD8	Gene names	ZHX1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

ZHX2_MOUSE
θ value	8.99809 (rank : 431)	NC score	0.186954 (rank : 334)
Query Neighborhood Hits	431	Target Neighborhood Hits	435	Shared Neighborhood Hits	182
SwissProt Accessions	Q8C0C0	Gene names	Zhx2, Afr1, Raf
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

CUTL1_HUMAN
θ value	θ > 10 (rank : 432)	NC score	0.133710 (rank : 342)
Query Neighborhood Hits	431	Target Neighborhood Hits	1574	Shared Neighborhood Hits	225
SwissProt Accessions	P39880, Q6NYH4, Q9UEV5	Gene names	CUTL1
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP).

CUTL1_MOUSE
θ value	θ > 10 (rank : 433)	NC score	0.146217 (rank : 337)
Query Neighborhood Hits	431	Target Neighborhood Hits	1620	Shared Neighborhood Hits	234
SwissProt Accessions	P53564, O08994, P70301, Q571L6, Q91ZD2	Gene names	Cutl1, Cux, Cux1, Kiaa4047
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein Cux).

CUTL2_HUMAN
θ value	θ > 10 (rank : 434)	NC score	0.137506 (rank : 338)
Query Neighborhood Hits	431	Target Neighborhood Hits	906	Shared Neighborhood Hits	186
SwissProt Accessions	O14529	Gene names	CUTL2, KIAA0293
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

CUTL2_MOUSE
θ value	θ > 10 (rank : 435)	NC score	0.137018 (rank : 340)
Query Neighborhood Hits	431	Target Neighborhood Hits	771	Shared Neighborhood Hits	182
SwissProt Accessions	P70298	Gene names	Cutl2
Domain Architecture
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

HMBX1_MOUSE
θ value	θ > 10 (rank : 436)	NC score	0.187027 (rank : 333)
Query Neighborhood Hits	431	Target Neighborhood Hits	117	Shared Neighborhood Hits	101
SwissProt Accessions	Q8BJA3, Q80WC2, Q8BWE7, Q99LV1	Gene names	Hmbox1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

HNF6_HUMAN
θ value	θ > 10 (rank : 437)	NC score	0.077686 (rank : 363)
Query Neighborhood Hits	431	Target Neighborhood Hits	127	Shared Neighborhood Hits	75
SwissProt Accessions	Q9UBC0, Q99744, Q9UMR6	Gene names	ONECUT1, HNF6, HNF6A
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

HNF6_MOUSE
θ value	θ > 10 (rank : 438)	NC score	0.081498 (rank : 358)
Query Neighborhood Hits	431	Target Neighborhood Hits	124	Shared Neighborhood Hits	77
SwissProt Accessions	O08755	Gene names	Onecut1, Hnf6, Hnf6a
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

HOMEZ_HUMAN
θ value	θ > 10 (rank : 439)	NC score	0.057810 (rank : 382)
Query Neighborhood Hits	431	Target Neighborhood Hits	110	Shared Neighborhood Hits	47
SwissProt Accessions	Q8IX15, Q6P049, Q86XB6, Q9P2A5	Gene names	HOMEZ, KIAA1443
Domain Architecture
Description	Homeobox and leucine zipper protein Homez (Homeodomain leucine zipper- containing factor).

HOP_HUMAN
θ value	θ > 10 (rank : 440)	NC score	0.325774 (rank : 295)
Query Neighborhood Hits	431	Target Neighborhood Hits	107	Shared Neighborhood Hits	99
SwissProt Accessions	Q9BPY8, Q8N0V6, Q96CI1	Gene names	HOP, HOD, LAGY, NECC1, OB1
Domain Architecture	No domain graphic available
Description	Homeodomain-only protein (Lung cancer-associated Y protein) (Odd homeobox protein 1) (Not expressed in choriocarcinoma protein 1).

LMO3_HUMAN
θ value	θ > 10 (rank : 441)	NC score	0.075550 (rank : 367)
Query Neighborhood Hits	431	Target Neighborhood Hits	111	Shared Neighborhood Hits	26
SwissProt Accessions	Q8TAP4, Q8N974, Q9UDD5	Gene names	LMO3, RBTN3, RHOM3
Domain Architecture
Description	LIM-only protein 3 (Neuronal-specific transcription factor DAT1) (Rhombotin-3).

LMO3_MOUSE
θ value	θ > 10 (rank : 442)	NC score	0.075550 (rank : 368)
Query Neighborhood Hits	431	Target Neighborhood Hits	111	Shared Neighborhood Hits	26
SwissProt Accessions	Q8BZL8	Gene names	Lmo3
Domain Architecture
Description	LIM-only protein 3 (Neuronal-specific transcription factor DAT1).

LMO4_HUMAN
θ value	θ > 10 (rank : 443)	NC score	0.077402 (rank : 364)
Query Neighborhood Hits	431	Target Neighborhood Hits	111	Shared Neighborhood Hits	26
SwissProt Accessions	P61968, O00158, O88894	Gene names	LMO4
Domain Architecture
Description	LIM domain transcription factor LMO4 (LIM domain only protein 4) (LMO- 4) (Breast tumor autoantigen).

LMO4_MOUSE
θ value	θ > 10 (rank : 444)	NC score	0.077402 (rank : 365)
Query Neighborhood Hits	431	Target Neighborhood Hits	111	Shared Neighborhood Hits	26
SwissProt Accessions	P61969, O00158, O88894	Gene names	Lmo4
Domain Architecture
Description	LIM domain transcription factor LMO4 (LIM domain only protein 4) (LMO- 4) (Breast tumor autoantigen).

MEIS1_HUMAN
θ value	θ > 10 (rank : 445)	NC score	0.079853 (rank : 359)
Query Neighborhood Hits	431	Target Neighborhood Hits	115	Shared Neighborhood Hits	92
SwissProt Accessions	O00470	Gene names	MEIS1
Domain Architecture
Description	Homeobox protein Meis1.

MEIS1_MOUSE
θ value	θ > 10 (rank : 446)	NC score	0.079849 (rank : 360)
Query Neighborhood Hits	431	Target Neighborhood Hits	115	Shared Neighborhood Hits	92
SwissProt Accessions	Q60954, Q5SVC8, Q60955, Q8CIL0	Gene names	Meis1
Domain Architecture
Description	Homeobox protein Meis1 (Myeloid ecotropic viral integration site 1).

MEIS2_HUMAN
θ value	θ > 10 (rank : 447)	NC score	0.086313 (rank : 353)
Query Neighborhood Hits	431	Target Neighborhood Hits	182	Shared Neighborhood Hits	101
SwissProt Accessions	O14770, Q96KI4, Q96KI5, Q9NRS1, Q9NRS2, Q9NRS3	Gene names	MEIS2, MRG1
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

MEIS2_MOUSE
θ value	θ > 10 (rank : 448)	NC score	0.087080 (rank : 352)
Query Neighborhood Hits	431	Target Neighborhood Hits	208	Shared Neighborhood Hits	102
SwissProt Accessions	P97367, O35676, O35677, P97403, P97404	Gene names	Meis2, Mrg1, Stra10
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

MEIS3_HUMAN
θ value	θ > 10 (rank : 449)	NC score	0.083296 (rank : 355)
Query Neighborhood Hits	431	Target Neighborhood Hits	118	Shared Neighborhood Hits	91
SwissProt Accessions	Q99687, Q6NT73, Q8TC66, Q9NPW2	Gene names	MEIS3, MRG2
Domain Architecture	No domain graphic available
Description	Homeobox protein Meis3 (Meis1-related protein 2).

MEIS3_MOUSE
θ value	θ > 10 (rank : 450)	NC score	0.081695 (rank : 357)
Query Neighborhood Hits	431	Target Neighborhood Hits	118	Shared Neighborhood Hits	90
SwissProt Accessions	P97368, Q99L81	Gene names	Meis3, Mrg2
Domain Architecture
Description	Homeobox protein Meis3 (Meis1-related protein 2).

PAX1_HUMAN
θ value	θ > 10 (rank : 451)	NC score	0.091348 (rank : 351)
Query Neighborhood Hits	431	Target Neighborhood Hits	72	Shared Neighborhood Hits	14
SwissProt Accessions	P15863, Q642X9, Q6NTC0, Q9Y558	Gene names	PAX1, HUP48
Domain Architecture
Description	Paired box protein Pax-1 (HUP48).

PAX1_MOUSE
θ value	θ > 10 (rank : 452)	NC score	0.091982 (rank : 350)
Query Neighborhood Hits	431	Target Neighborhood Hits	69	Shared Neighborhood Hits	15
SwissProt Accessions	P09084, Q9R2B1	Gene names	Pax1, Pax-1
Domain Architecture
Description	Paired box protein Pax-1.

PAX2_HUMAN
θ value	θ > 10 (rank : 453)	NC score	0.136684 (rank : 341)
Query Neighborhood Hits	431	Target Neighborhood Hits	84	Shared Neighborhood Hits	54
SwissProt Accessions	Q02962, Q15105, Q15110, Q15837	Gene names	PAX2
Domain Architecture
Description	Paired box protein Pax-2.

PAX2_MOUSE
θ value	θ > 10 (rank : 454)	NC score	0.137221 (rank : 339)
Query Neighborhood Hits	431	Target Neighborhood Hits	86	Shared Neighborhood Hits	53
SwissProt Accessions	P32114	Gene names	Pax2, Pax-2
Domain Architecture
Description	Paired box protein Pax-2.

PAX5_HUMAN
θ value	θ > 10 (rank : 455)	NC score	0.125080 (rank : 343)
Query Neighborhood Hits	431	Target Neighborhood Hits	106	Shared Neighborhood Hits	50
SwissProt Accessions	Q02548, O75933	Gene names	PAX5
Domain Architecture
Description	Paired box protein Pax-5 (B-cell-specific transcription factor) (BSAP).

PAX5_MOUSE
θ value	θ > 10 (rank : 456)	NC score	0.124652 (rank : 344)
Query Neighborhood Hits	431	Target Neighborhood Hits	106	Shared Neighborhood Hits	50
SwissProt Accessions	Q02650	Gene names	Pax5, Pax-5
Domain Architecture
Description	Paired box protein Pax-5 (B-cell-specific transcription factor) (BSAP).

PAX8_HUMAN
θ value	θ > 10 (rank : 457)	NC score	0.104402 (rank : 346)
Query Neighborhood Hits	431	Target Neighborhood Hits	56	Shared Neighborhood Hits	21
SwissProt Accessions	Q06710, Q09155, Q16337, Q16338, Q16339, Q96J49	Gene names	PAX8
Domain Architecture
Description	Paired box protein Pax-8.

PAX8_MOUSE
θ value	θ > 10 (rank : 458)	NC score	0.115740 (rank : 345)
Query Neighborhood Hits	431	Target Neighborhood Hits	62	Shared Neighborhood Hits	28
SwissProt Accessions	Q00288, P97342	Gene names	Pax8, Pax-8
Domain Architecture
Description	Paired box protein Pax-8.

PAX9_HUMAN
θ value	θ > 10 (rank : 459)	NC score	0.095644 (rank : 349)
Query Neighborhood Hits	431	Target Neighborhood Hits	92	Shared Neighborhood Hits	16
SwissProt Accessions	P55771, Q99582, Q9UQR4	Gene names	PAX9
Domain Architecture
Description	Paired box protein Pax-9.

PAX9_MOUSE
θ value	θ > 10 (rank : 460)	NC score	0.096505 (rank : 348)
Query Neighborhood Hits	431	Target Neighborhood Hits	67	Shared Neighborhood Hits	11
SwissProt Accessions	P47242	Gene names	Pax9, Pax-9
Domain Architecture
Description	Paired box protein Pax-9.

PKNX1_HUMAN
θ value	θ > 10 (rank : 461)	NC score	0.063815 (rank : 379)
Query Neighborhood Hits	431	Target Neighborhood Hits	101	Shared Neighborhood Hits	74
SwissProt Accessions	P55347, O00528, Q8IWT7	Gene names	PKNOX1, PREP1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox protein PREP-1).

PKNX1_MOUSE
θ value	θ > 10 (rank : 462)	NC score	0.063979 (rank : 378)
Query Neighborhood Hits	431	Target Neighborhood Hits	103	Shared Neighborhood Hits	75
SwissProt Accessions	O70477	Gene names	Pknox1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1).

PKNX2_HUMAN
θ value	θ > 10 (rank : 463)	NC score	0.061266 (rank : 381)
Query Neighborhood Hits	431	Target Neighborhood Hits	133	Shared Neighborhood Hits	80
SwissProt Accessions	Q96KN3, Q63HL6, Q86XD1	Gene names	PKNOX2, PREP2
Domain Architecture
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

PKNX2_MOUSE
θ value	θ > 10 (rank : 464)	NC score	0.062489 (rank : 380)
Query Neighborhood Hits	431	Target Neighborhood Hits	197	Shared Neighborhood Hits	84
SwissProt Accessions	Q8BG99, Q8R4B0	Gene names	Pknox2, Prep2
Domain Architecture	No domain graphic available
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

PO4F2_HUMAN
θ value	θ > 10 (rank : 465)	NC score	0.316853 (rank : 300)
Query Neighborhood Hits	431	Target Neighborhood Hits	310	Shared Neighborhood Hits	282
SwissProt Accessions	Q12837, Q13883, Q14987	Gene names	POU4F2, BRN3B
Domain Architecture
Description	POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brn-3B).

PO4F2_MOUSE
θ value	θ > 10 (rank : 466)	NC score	0.317631 (rank : 299)
Query Neighborhood Hits	431	Target Neighborhood Hits	312	Shared Neighborhood Hits	279
SwissProt Accessions	Q63934, Q63954	Gene names	Pou4f2, Brn3b
Domain Architecture
Description	POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brn-3B) (Brn-3.2).

PO4F3_HUMAN
θ value	θ > 10 (rank : 467)	NC score	0.314171 (rank : 304)
Query Neighborhood Hits	431	Target Neighborhood Hits	307	Shared Neighborhood Hits	279
SwissProt Accessions	Q15319, O60557	Gene names	POU4F3, BRN3C
Domain Architecture
Description	POU domain, class 4, transcription factor 3 (Brain-specific homeobox/POU domain protein 3C) (Brn-3C).

PO4F3_MOUSE
θ value	θ > 10 (rank : 468)	NC score	0.314572 (rank : 302)
Query Neighborhood Hits	431	Target Neighborhood Hits	311	Shared Neighborhood Hits	279
SwissProt Accessions	Q63955	Gene names	Pou4f3, Brn-3c, Brn3c
Domain Architecture
Description	POU domain, class 4, transcription factor 3 (Brain-specific homeobox/POU domain protein 3C) (Brn-3C).

PO5FL_HUMAN
θ value	θ > 10 (rank : 469)	NC score	0.158178 (rank : 336)
Query Neighborhood Hits	431	Target Neighborhood Hits	214	Shared Neighborhood Hits	179
SwissProt Accessions	Q06416, Q9BZV9	Gene names	POU5F1P1, OTF3C, POU5FLC8
Domain Architecture
Description	POU domain, class 5, transcription factor 1-like protein 1 (Octamer- binding protein 3-like).

PO5FM_HUMAN
θ value	θ > 10 (rank : 470)	NC score	0.159958 (rank : 335)
Query Neighborhood Hits	431	Target Neighborhood Hits	212	Shared Neighborhood Hits	182
SwissProt Accessions	Q9BZV7	Gene names	POU5F1P1, POU5FLC20
Domain Architecture
Description	POU domain, class 5, transcription factor 1-like protein 2.

PO5FN_HUMAN
θ value	θ > 10 (rank : 471)	NC score	0.096717 (rank : 347)
Query Neighborhood Hits	431	Target Neighborhood Hits	134	Shared Neighborhood Hits	113
SwissProt Accessions	Q9BZW0	Gene names	POU5FLC1
Domain Architecture
Description	POU domain, class 5, transcription factor 1-like protein 3.

RBTN1_HUMAN
θ value	θ > 10 (rank : 472)	NC score	0.075571 (rank : 366)
Query Neighborhood Hits	431	Target Neighborhood Hits	110	Shared Neighborhood Hits	26
SwissProt Accessions	P25800, Q4VBC5	Gene names	LMO1, RBTN1, RHOM1, TTG1
Domain Architecture
Description	Rhombotin-1 (Cysteine-rich protein TTG-1) (T-cell translocation protein 1) (LIM-only protein 1).

RBTN1_MOUSE
θ value	θ > 10 (rank : 473)	NC score	0.075512 (rank : 369)
Query Neighborhood Hits	431	Target Neighborhood Hits	109	Shared Neighborhood Hits	25
SwissProt Accessions	Q924W9	Gene names	Lmo1, Rbtn1, Rhom1, Ttg1
Domain Architecture	No domain graphic available
Description	Rhombotin-1 (Cysteine-rich protein TTG-1) (LIM-only protein 1).

RBTN2_HUMAN
θ value	θ > 10 (rank : 474)	NC score	0.072510 (rank : 371)
Query Neighborhood Hits	431	Target Neighborhood Hits	114	Shared Neighborhood Hits	26
SwissProt Accessions	P25791, Q9HD58	Gene names	LMO2, RBTN2, RHOM2, TTG2
Domain Architecture
Description	Rhombotin-2 (Cysteine-rich protein TTG-2) (T-cell translocation protein 2) (LIM-only protein 2).

RBTN2_MOUSE
θ value	θ > 10 (rank : 475)	NC score	0.072513 (rank : 370)
Query Neighborhood Hits	431	Target Neighborhood Hits	114	Shared Neighborhood Hits	26
SwissProt Accessions	P25801	Gene names	Lmo2, Rbtn-2, Rbtn2, Rhom-2
Domain Architecture
Description	Rhombotin-2 (Cysteine-rich protein TTG-2) (T-cell translocation protein 2) (LIM-only protein 2).

RHOX5_MOUSE
θ value	θ > 10 (rank : 476)	NC score	0.235333 (rank : 326)
Query Neighborhood Hits	431	Target Neighborhood Hits	69	Shared Neighborhood Hits	54
SwissProt Accessions	P52651	Gene names	Rhox5, Pem
Domain Architecture	No domain graphic available
Description	Homeobox protein Rhox5 (Reproductive homeobox on chromosome X 5) (Homeobox protein Pem) (Placenta and embryonic expression protein).

SPRM1_HUMAN
θ value	θ > 10 (rank : 477)	NC score	0.068319 (rank : 374)
Query Neighborhood Hits	431	Target Neighborhood Hits	72	Shared Neighborhood Hits	56
SwissProt Accessions	Q8N7G0, Q8N748	Gene names	SPRM1
Domain Architecture
Description	Sperm 1 POU-domain transcription factor (SPRM-1).

SPRM1_MOUSE
θ value	θ > 10 (rank : 478)	NC score	0.067009 (rank : 377)
Query Neighborhood Hits	431	Target Neighborhood Hits	73	Shared Neighborhood Hits	56
SwissProt Accessions	Q9DAC9	Gene names	Sprm1
Domain Architecture
Description	Sperm 1 POU-domain transcription factor (SPRM-1).

TF2LX_HUMAN
θ value	θ > 10 (rank : 479)	NC score	0.077844 (rank : 362)
Query Neighborhood Hits	431	Target Neighborhood Hits	108	Shared Neighborhood Hits	71
SwissProt Accessions	Q8IUE1	Gene names	TGIF2LX, TGIFLX
Domain Architecture
Description	Homeobox protein TGIF2LX (TGFB-induced factor 2-like protein, X- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the X).

TF2LY_HUMAN
θ value	θ > 10 (rank : 480)	NC score	0.070019 (rank : 372)
Query Neighborhood Hits	431	Target Neighborhood Hits	90	Shared Neighborhood Hits	64
SwissProt Accessions	Q8IUE0	Gene names	TGIF2LY, TGIFLY
Domain Architecture
Description	Homeobox protein TGIF2LY (TGFB-induced factor 2-like protein, Y- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the Y).

TGIF2_HUMAN
θ value	θ > 10 (rank : 481)	NC score	0.067919 (rank : 375)
Query Neighborhood Hits	431	Target Neighborhood Hits	94	Shared Neighborhood Hits	57
SwissProt Accessions	Q9GZN2	Gene names	TGIF2
Domain Architecture
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

TGIF_HUMAN
θ value	θ > 10 (rank : 482)	NC score	0.068683 (rank : 373)
Query Neighborhood Hits	431	Target Neighborhood Hits	109	Shared Neighborhood Hits	59
SwissProt Accessions	Q15583, Q6ICR0, Q8N5X9, Q9NRS0	Gene names	TGIF
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

TGIF_MOUSE
θ value	θ > 10 (rank : 483)	NC score	0.067296 (rank : 376)
Query Neighborhood Hits	431	Target Neighborhood Hits	125	Shared Neighborhood Hits	59
SwissProt Accessions	P70284, Q921F9, Q99JS3	Gene names	Tgif
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

ZHX3_MOUSE
θ value	θ > 10 (rank : 484)	NC score	0.218240 (rank : 328)
Query Neighborhood Hits	431	Target Neighborhood Hits	321	Shared Neighborhood Hits	214
SwissProt Accessions	Q8C0Q2, Q80U14	Gene names	Zhx3, Kiaa0395, Tix1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

Hits sorted by NC score

NKX61_HUMAN
NC score	0.999962 (rank : 1)	θ value	8.19079e-94 (rank : 2)
Query Neighborhood Hits	431	Target Neighborhood Hits	431	Shared Neighborhood Hits	431
SwissProt Accessions	P78426	Gene names	NKX6-1, NKX6A
Domain Architecture
Description	Homeobox protein Nkx-6.1.

NKX61_MOUSE
NC score	0.996173 (rank : 2)	θ value	2.62879e-100 (rank : 1)
Query Neighborhood Hits	431	Target Neighborhood Hits	439	Shared Neighborhood Hits	401
SwissProt Accessions	Q99MA9, Q9ERQ7	Gene names	Nkx6-1, Nkx6.1, Nkx6a
Domain Architecture
Description	Homeobox protein Nkx-6.1.

NKX12_MOUSE
NC score	0.949421 (rank : 3)	θ value	2.69671e-12 (rank : 33)
Query Neighborhood Hits	431	Target Neighborhood Hits	332	Shared Neighborhood Hits	311
SwissProt Accessions	P42580, Q9JHF2, Q9JKW5, Q9JKW6, Q9JKW9, Q9JKX0, Q9JKX1	Gene names	Nkx1-2, Nkx1.1, Sax1
Domain Architecture
Description	NK1 transcription factor-related protein 2 (Homeobox protein SAX-1) (NKX-1.1).

HMX2_MOUSE
NC score	0.945212 (rank : 4)	θ value	1.68911e-14 (rank : 6)
Query Neighborhood Hits	431	Target Neighborhood Hits	354	Shared Neighborhood Hits	321
SwissProt Accessions	P43687, Q8R1Q2	Gene names	Hmx2, Nkx-5.2, Nkx5-2
Domain Architecture
Description	Homeobox protein HMX2 (Homeobox protein Nkx-5.2).

BSH_MOUSE
NC score	0.944684 (rank : 5)	θ value	3.89403e-11 (rank : 60)
Query Neighborhood Hits	431	Target Neighborhood Hits	349	Shared Neighborhood Hits	320
SwissProt Accessions	Q810B3	Gene names	Bsx
Domain Architecture	No domain graphic available
Description	Brain-specific homeobox protein homolog.

EMX1_HUMAN
NC score	0.943132 (rank : 6)	θ value	9.26847e-13 (rank : 23)
Query Neighborhood Hits	431	Target Neighborhood Hits	336	Shared Neighborhood Hits	320
SwissProt Accessions	Q04741, Q86XB0	Gene names	EMX1
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX1 (Empty spiracles homolog 1) (Empty spiracles- like protein 1).

EMX2_MOUSE
NC score	0.942546 (rank : 7)	θ value	3.18553e-13 (rank : 19)
Query Neighborhood Hits	431	Target Neighborhood Hits	340	Shared Neighborhood Hits	323
SwissProt Accessions	Q04744, Q80UE7	Gene names	Emx2, Emx-2
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

EMX2_HUMAN
NC score	0.942458 (rank : 8)	θ value	3.18553e-13 (rank : 18)
Query Neighborhood Hits	431	Target Neighborhood Hits	341	Shared Neighborhood Hits	322
SwissProt Accessions	Q04743, Q96NN8, Q9BQF4	Gene names	EMX2
Domain Architecture
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

HLXB9_MOUSE
NC score	0.942406 (rank : 9)	θ value	6.41864e-14 (rank : 9)
Query Neighborhood Hits	431	Target Neighborhood Hits	354	Shared Neighborhood Hits	325
SwissProt Accessions	Q9QZW9	Gene names	Hlxb9
Domain Architecture
Description	Homeobox protein HB9.

HLXB9_HUMAN
NC score	0.942204 (rank : 10)	θ value	9.26847e-13 (rank : 24)
Query Neighborhood Hits	431	Target Neighborhood Hits	336	Shared Neighborhood Hits	320
SwissProt Accessions	P50219, Q9Y648	Gene names	HLXB9
Domain Architecture
Description	Homeobox protein HB9.

DBX1_MOUSE
NC score	0.942020 (rank : 11)	θ value	6.41864e-14 (rank : 8)
Query Neighborhood Hits	431	Target Neighborhood Hits	346	Shared Neighborhood Hits	321
SwissProt Accessions	P52950	Gene names	Dbx1, Dbx
Domain Architecture
Description	Homeobox protein DBX1.

HMX3_MOUSE
NC score	0.941977 (rank : 12)	θ value	1.99529e-15 (rank : 3)
Query Neighborhood Hits	431	Target Neighborhood Hits	342	Shared Neighborhood Hits	316
SwissProt Accessions	P42581	Gene names	Hmx3, Nkx-5.1, Nkx5-1
Domain Architecture
Description	Homeobox protein HMX3 (Homeobox protein Nkx-5.1).

BARX1_HUMAN
NC score	0.939449 (rank : 13)	θ value	2.28291e-11 (rank : 54)
Query Neighborhood Hits	431	Target Neighborhood Hits	326	Shared Neighborhood Hits	308
SwissProt Accessions	Q9HBU1	Gene names	BARX1
Domain Architecture
Description	Homeobox protein BarH-like 1.

BARX1_MOUSE
NC score	0.939438 (rank : 14)	θ value	3.52202e-12 (rank : 34)
Query Neighborhood Hits	431	Target Neighborhood Hits	324	Shared Neighborhood Hits	308
SwissProt Accessions	Q9ER42, O09066, P70159, Q9ERV2	Gene names	Barx1
Domain Architecture
Description	Homeobox protein BarH-like 1.

HHEX_MOUSE
NC score	0.939250 (rank : 15)	θ value	3.18553e-13 (rank : 20)
Query Neighborhood Hits	431	Target Neighborhood Hits	350	Shared Neighborhood Hits	314
SwissProt Accessions	P43120	Gene names	Hhex, Prhx
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

BARX2_MOUSE
NC score	0.939136 (rank : 16)	θ value	7.84624e-12 (rank : 41)
Query Neighborhood Hits	431	Target Neighborhood Hits	335	Shared Neighborhood Hits	313
SwissProt Accessions	O08686	Gene names	Barx2
Domain Architecture
Description	Homeobox protein BarH-like 2.

HHEX_HUMAN
NC score	0.938659 (rank : 17)	θ value	1.09485e-13 (rank : 12)
Query Neighborhood Hits	431	Target Neighborhood Hits	358	Shared Neighborhood Hits	309
SwissProt Accessions	Q03014	Gene names	HHEX, HEX, PRH, PRHX
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

NKX31_HUMAN
NC score	0.936554 (rank : 18)	θ value	4.59992e-12 (rank : 39)
Query Neighborhood Hits	431	Target Neighborhood Hits	331	Shared Neighborhood Hits	307
SwissProt Accessions	Q99801, O15465, Q9H2P4, Q9H2P5, Q9H2P6, Q9H2P7, Q9HBG0	Gene names	NKX3-1, NKX3.1, NKX3A
Domain Architecture
Description	Homeobox protein Nkx-3.1.

BARX2_HUMAN
NC score	0.936465 (rank : 19)	θ value	3.52202e-12 (rank : 35)
Query Neighborhood Hits	431	Target Neighborhood Hits	387	Shared Neighborhood Hits	317
SwissProt Accessions	Q9UMQ3, O43518	Gene names	BARX2
Domain Architecture
Description	Homeobox protein BarH-like 2.

MSX3_MOUSE
NC score	0.934674 (rank : 20)	θ value	1.74796e-11 (rank : 53)
Query Neighborhood Hits	431	Target Neighborhood Hits	330	Shared Neighborhood Hits	311
SwissProt Accessions	P70354, P70246, Q03360, Q80W10	Gene names	Msx3, Msx-3
Domain Architecture
Description	Homeobox protein MSX-3.

NKX32_HUMAN
NC score	0.932352 (rank : 21)	θ value	7.09661e-13 (rank : 21)
Query Neighborhood Hits	431	Target Neighborhood Hits	323	Shared Neighborhood Hits	310
SwissProt Accessions	P78367	Gene names	BAPX1, NKX3B
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

DLX6_HUMAN
NC score	0.931463 (rank : 22)	θ value	3.52202e-12 (rank : 36)
Query Neighborhood Hits	431	Target Neighborhood Hits	341	Shared Neighborhood Hits	322
SwissProt Accessions	P56179, Q3ZAR6, Q9UPL2	Gene names	DLX6
Domain Architecture
Description	Homeobox protein DLX-6.

TLX2_MOUSE
NC score	0.930996 (rank : 23)	θ value	6.41864e-14 (rank : 11)
Query Neighborhood Hits	431	Target Neighborhood Hits	336	Shared Neighborhood Hits	312
SwissProt Accessions	Q61663	Gene names	Tlx2, Hox11l1, Tlx1l1
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Homeobox TLX-2) (PMUR10F).

NKX31_MOUSE
NC score	0.930643 (rank : 24)	θ value	6.00763e-12 (rank : 40)
Query Neighborhood Hits	431	Target Neighborhood Hits	379	Shared Neighborhood Hits	309
SwissProt Accessions	P97436, O09087	Gene names	Nkx3-1, Nkx-3.1, Nkx3a
Domain Architecture
Description	Homeobox protein Nkx-3.1.

NKX32_MOUSE
NC score	0.930270 (rank : 25)	θ value	7.09661e-13 (rank : 22)
Query Neighborhood Hits	431	Target Neighborhood Hits	326	Shared Neighborhood Hits	309
SwissProt Accessions	P97503	Gene names	Bapx1, Nkx-3.2, Nkx3-2, Nkx3b
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

DLX1_HUMAN
NC score	0.930212 (rank : 26)	θ value	1.42992e-13 (rank : 14)
Query Neighborhood Hits	431	Target Neighborhood Hits	343	Shared Neighborhood Hits	322
SwissProt Accessions	P56177, Q53ZU4, Q8IYB2	Gene names	DLX1
Domain Architecture
Description	Homeobox protein DLX-1.

DLX1_MOUSE
NC score	0.929987 (rank : 27)	θ value	1.42992e-13 (rank : 15)
Query Neighborhood Hits	431	Target Neighborhood Hits	343	Shared Neighborhood Hits	322
SwissProt Accessions	Q64317	Gene names	Dlx1
Domain Architecture
Description	Homeobox protein DLX-1.

TLX2_HUMAN
NC score	0.929909 (rank : 28)	θ value	6.41864e-14 (rank : 10)
Query Neighborhood Hits	431	Target Neighborhood Hits	352	Shared Neighborhood Hits	314
SwissProt Accessions	O43763, Q9UQ48	Gene names	TLX2, HOX11L1, NCX
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Neural crest homeobox protein).

TLX3_MOUSE
NC score	0.928249 (rank : 29)	θ value	7.58209e-15 (rank : 5)
Query Neighborhood Hits	431	Target Neighborhood Hits	346	Shared Neighborhood Hits	318
SwissProt Accessions	O55144	Gene names	Tlx3, Hox11l2, Rnx, Tlx1l2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox TLX-3) (Homeobox protein Hox-11L2) (Respiratory neuron homeobox protein).

BARH1_MOUSE
NC score	0.927514 (rank : 30)	θ value	6.64225e-11 (rank : 67)
Query Neighborhood Hits	431	Target Neighborhood Hits	350	Shared Neighborhood Hits	324
SwissProt Accessions	P63157, Q9JK26	Gene names	Barhl1, Bhx1, Mbh2
Domain Architecture	No domain graphic available
Description	BarH-like 1 homeobox protein (Bar-class homeodomain protein MBH2) (BarH-related homeobox protein 1).

MSX1_MOUSE
NC score	0.927117 (rank : 31)	θ value	2.98157e-11 (rank : 59)
Query Neighborhood Hits	431	Target Neighborhood Hits	322	Shared Neighborhood Hits	309
SwissProt Accessions	P13297	Gene names	Msx1, Hox7, Hox7.1
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7) (Hox- 7.1).

DLX2_HUMAN
NC score	0.926884 (rank : 32)	θ value	2.0648e-12 (rank : 30)
Query Neighborhood Hits	431	Target Neighborhood Hits	355	Shared Neighborhood Hits	326
SwissProt Accessions	Q07687	Gene names	DLX2
Domain Architecture
Description	Homeobox protein DLX-2.

BARH1_HUMAN
NC score	0.926774 (rank : 33)	θ value	6.64225e-11 (rank : 66)
Query Neighborhood Hits	431	Target Neighborhood Hits	373	Shared Neighborhood Hits	325
SwissProt Accessions	Q9BZE3, Q9NY88	Gene names	BARHL1
Domain Architecture
Description	BarH-like 1 homeobox protein.

MSX1_HUMAN
NC score	0.926632 (rank : 34)	θ value	3.52202e-12 (rank : 37)
Query Neighborhood Hits	431	Target Neighborhood Hits	374	Shared Neighborhood Hits	313
SwissProt Accessions	P28360, Q96NY4	Gene names	MSX1, HOX7
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7).

LBX1_MOUSE
NC score	0.926436 (rank : 35)	θ value	1.25267e-09 (rank : 102)
Query Neighborhood Hits	431	Target Neighborhood Hits	349	Shared Neighborhood Hits	317
SwissProt Accessions	P52955	Gene names	Lbx1, Lbx1h
Domain Architecture
Description	Transcription factor LBX1.

DLX2_MOUSE
NC score	0.926309 (rank : 36)	θ value	1.58096e-12 (rank : 29)
Query Neighborhood Hits	431	Target Neighborhood Hits	352	Shared Neighborhood Hits	325
SwissProt Accessions	P40764	Gene names	Dlx2, Tes-1, Tes1
Domain Architecture
Description	Homeobox protein DLX-2 (Homeobox protein TES-1).

MSX2_HUMAN
NC score	0.926247 (rank : 37)	θ value	2.0648e-12 (rank : 32)
Query Neighborhood Hits	431	Target Neighborhood Hits	337	Shared Neighborhood Hits	313
SwissProt Accessions	P35548	Gene names	MSX2, HOX8
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8).

GBX1_HUMAN
NC score	0.925811 (rank : 38)	θ value	2.98157e-11 (rank : 57)
Query Neighborhood Hits	431	Target Neighborhood Hits	334	Shared Neighborhood Hits	299
SwissProt Accessions	Q14549	Gene names	GBX1
Domain Architecture	No domain graphic available
Description	Homeobox protein GBX-1 (Gastrulation and brain-specific homeobox protein 1).

GBX1_MOUSE
NC score	0.924467 (rank : 39)	θ value	2.98157e-11 (rank : 58)
Query Neighborhood Hits	431	Target Neighborhood Hits	350	Shared Neighborhood Hits	303
SwissProt Accessions	P82976, Q8CGW5	Gene names	Gbx1
Domain Architecture	No domain graphic available
Description	Homeobox protein GBX-1 (Gastrulation and brain-specific homeobox protein 1).

LBX1_HUMAN
NC score	0.924173 (rank : 40)	θ value	4.76016e-09 (rank : 122)
Query Neighborhood Hits	431	Target Neighborhood Hits	357	Shared Neighborhood Hits	319
SwissProt Accessions	P52954	Gene names	LBX1
Domain Architecture
Description	Transcription factor LBX1.

HLX1_HUMAN
NC score	0.924049 (rank : 41)	θ value	4.91457e-14 (rank : 7)
Query Neighborhood Hits	431	Target Neighborhood Hits	370	Shared Neighborhood Hits	307
SwissProt Accessions	Q14774, Q15988	Gene names	HLX1
Domain Architecture
Description	Homeobox protein HLX1 (Homeobox protein HB24).

GBX2_MOUSE
NC score	0.924032 (rank : 42)	θ value	1.74796e-11 (rank : 52)
Query Neighborhood Hits	431	Target Neighborhood Hits	326	Shared Neighborhood Hits	301
SwissProt Accessions	P48031	Gene names	Gbx2, Mmoxa, Stra7
Domain Architecture
Description	Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2) (Homeobox protein STRA7).

GBX2_HUMAN
NC score	0.923888 (rank : 43)	θ value	1.74796e-11 (rank : 51)
Query Neighborhood Hits	431	Target Neighborhood Hits	322	Shared Neighborhood Hits	302
SwissProt Accessions	P52951, O43833, Q53RX5, Q9Y5Y1	Gene names	GBX2
Domain Architecture
Description	Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2).

TLX1_HUMAN
NC score	0.923682 (rank : 44)	θ value	1.09485e-13 (rank : 13)
Query Neighborhood Hits	431	Target Neighborhood Hits	347	Shared Neighborhood Hits	314
SwissProt Accessions	P31314, O75699, Q9HCA0	Gene names	TLX1, HOX11, TCL3
Domain Architecture
Description	T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (TCL-3 proto-oncogene).

TLX1_MOUSE
NC score	0.923129 (rank : 45)	θ value	1.42992e-13 (rank : 16)
Query Neighborhood Hits	431	Target Neighborhood Hits	347	Shared Neighborhood Hits	313
SwissProt Accessions	P43345	Gene names	Tlx1, Hox11, Tlx-1
Domain Architecture
Description	T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (Homeobox TLX-1).

HLX1_MOUSE
NC score	0.923047 (rank : 46)	θ value	1.86753e-13 (rank : 17)
Query Neighborhood Hits	431	Target Neighborhood Hits	362	Shared Neighborhood Hits	306
SwissProt Accessions	Q61670	Gene names	Hlx1, Hlx
Domain Architecture
Description	Homeobox protein HLX1.

BARH2_MOUSE
NC score	0.922857 (rank : 47)	θ value	1.47974e-10 (rank : 83)
Query Neighborhood Hits	431	Target Neighborhood Hits	397	Shared Neighborhood Hits	326
SwissProt Accessions	Q8VIB5, Q66L43	Gene names	Barhl2, Barh1, Mbh1
Domain Architecture	No domain graphic available
Description	BarH-like 2 homeobox protein (Bar-class homeodomain protein MBH1) (Homeobox protein B-H1).

TLX3_HUMAN
NC score	0.922547 (rank : 48)	θ value	5.8054e-15 (rank : 4)
Query Neighborhood Hits	431	Target Neighborhood Hits	403	Shared Neighborhood Hits	318
SwissProt Accessions	O43711, Q96AD3	Gene names	TLX3, HOX11L2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox protein Hox-11L2).

VAX2_HUMAN
NC score	0.922328 (rank : 49)	θ value	7.84624e-12 (rank : 44)
Query Neighborhood Hits	431	Target Neighborhood Hits	337	Shared Neighborhood Hits	312
SwissProt Accessions	Q9UIW0	Gene names	VAX2
Domain Architecture
Description	Ventral anterior homeobox 2.

MSX2_MOUSE
NC score	0.922284 (rank : 50)	θ value	3.52202e-12 (rank : 38)
Query Neighborhood Hits	431	Target Neighborhood Hits	345	Shared Neighborhood Hits	311
SwissProt Accessions	Q03358, Q63856	Gene names	Msx2, Hox-8.1, Msx-2
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8.1).

VAX2_MOUSE
NC score	0.921860 (rank : 51)	θ value	7.84624e-12 (rank : 45)
Query Neighborhood Hits	431	Target Neighborhood Hits	338	Shared Neighborhood Hits	311
SwissProt Accessions	Q9WTP9	Gene names	Vax2, Vex
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 2 (Ventral retina homeodomain protein).

BARH2_HUMAN
NC score	0.920622 (rank : 52)	θ value	1.47974e-10 (rank : 82)
Query Neighborhood Hits	431	Target Neighborhood Hits	419	Shared Neighborhood Hits	324
SwissProt Accessions	Q9NY43, Q7Z4N7	Gene names	BARHL2
Domain Architecture
Description	BarH-like 2 homeobox protein.

NKX26_MOUSE
NC score	0.919805 (rank : 53)	θ value	5.62301e-10 (rank : 94)
Query Neighborhood Hits	431	Target Neighborhood Hits	343	Shared Neighborhood Hits	317
SwissProt Accessions	P43688	Gene names	Nkx2-6, Nkx-2.6, Nkx2f
Domain Architecture
Description	Homeobox protein Nkx-2.6 (Homeobox protein NK-2 homolog F).

VAX1_HUMAN
NC score	0.919389 (rank : 54)	θ value	3.89403e-11 (rank : 61)
Query Neighborhood Hits	431	Target Neighborhood Hits	355	Shared Neighborhood Hits	319
SwissProt Accessions	Q5SQQ9, Q6ZSX0	Gene names	VAX1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

VAX1_MOUSE
NC score	0.919226 (rank : 55)	θ value	3.89403e-11 (rank : 62)
Query Neighborhood Hits	431	Target Neighborhood Hits	351	Shared Neighborhood Hits	317
SwissProt Accessions	Q2NKI2, O88880	Gene names	Vax1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

DLX3_MOUSE
NC score	0.918986 (rank : 56)	θ value	1.74796e-11 (rank : 48)
Query Neighborhood Hits	431	Target Neighborhood Hits	367	Shared Neighborhood Hits	326
SwissProt Accessions	Q64205	Gene names	Dlx3
Domain Architecture
Description	Homeobox protein DLX-3.

NKX28_HUMAN
NC score	0.918473 (rank : 57)	θ value	2.79066e-09 (rank : 116)
Query Neighborhood Hits	431	Target Neighborhood Hits	352	Shared Neighborhood Hits	325
SwissProt Accessions	O15522	Gene names	NKX2-8, NKX-2.8, NKX2G, NKX2H
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H).

DLX3_HUMAN
NC score	0.918439 (rank : 58)	θ value	1.74796e-11 (rank : 47)
Query Neighborhood Hits	431	Target Neighborhood Hits	369	Shared Neighborhood Hits	327
SwissProt Accessions	O60479	Gene names	DLX3
Domain Architecture
Description	Homeobox protein DLX-3.

DLX4_HUMAN
NC score	0.917095 (rank : 59)	θ value	1.9326e-10 (rank : 87)
Query Neighborhood Hits	431	Target Neighborhood Hits	350	Shared Neighborhood Hits	315
SwissProt Accessions	Q92988, O60480, Q13265, Q6PJK0, Q9HBE0	Gene names	DLX4, BP1, DLX7, DLX8
Domain Architecture	No domain graphic available
Description	Homeobox protein DLX-4 (DLX-7) (DLX-8) (Beta protein 1).

DLX4_MOUSE
NC score	0.917033 (rank : 60)	θ value	1.9326e-10 (rank : 88)
Query Neighborhood Hits	431	Target Neighborhood Hits	352	Shared Neighborhood Hits	313
SwissProt Accessions	P70436, Q3UM51, Q8R4I3	Gene names	Dlx4, Dlx7
Domain Architecture
Description	Homeobox protein DLX-4 (DLX-7).

NKX25_HUMAN
NC score	0.916656 (rank : 61)	θ value	1.133e-10 (rank : 79)
Query Neighborhood Hits	431	Target Neighborhood Hits	338	Shared Neighborhood Hits	321
SwissProt Accessions	P52952	Gene names	NKX2-5, CSX, NKX2.5, NKX2E
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

NKX25_MOUSE
NC score	0.916110 (rank : 62)	θ value	7.84624e-12 (rank : 43)
Query Neighborhood Hits	431	Target Neighborhood Hits	347	Shared Neighborhood Hits	320
SwissProt Accessions	P42582, P97335	Gene names	Nkx2-5, Csx, Nkx-2.5, Nkx2e
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

NKX23_HUMAN
NC score	0.915507 (rank : 63)	θ value	6.64225e-11 (rank : 70)
Query Neighborhood Hits	431	Target Neighborhood Hits	346	Shared Neighborhood Hits	323
SwissProt Accessions	Q8TAU0, Q9NYS6	Gene names	NKX2-3, NKX23, NKX2C
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NKX-2.3) (Homeobox protein NK-2 homolog C).

IPF1_MOUSE
NC score	0.915391 (rank : 64)	θ value	1.33837e-11 (rank : 46)
Query Neighborhood Hits	431	Target Neighborhood Hits	340	Shared Neighborhood Hits	315
SwissProt Accessions	P52946	Gene names	Ipf1, Pdx1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox 1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Pancreas/duodenum homeobox 1).

NKX28_MOUSE
NC score	0.914532 (rank : 65)	θ value	8.11959e-09 (rank : 131)
Query Neighborhood Hits	431	Target Neighborhood Hits	347	Shared Neighborhood Hits	323
SwissProt Accessions	O70584	Gene names	Nkx2-8, Nkx-2.9, Nkx2-9, Nkx2h
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H) (Homeobox protein Nkx-2.9).

NKX23_MOUSE
NC score	0.914377 (rank : 66)	θ value	6.64225e-11 (rank : 71)
Query Neighborhood Hits	431	Target Neighborhood Hits	340	Shared Neighborhood Hits	319
SwissProt Accessions	P97334, Q9QZ60, Q9WV67	Gene names	Nkx2-3, Nkx-2.3, Nkx2c
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NK-2 homolog C) (Nkx2-C) (Homeobox protein NK-2 homolog 3).

IPF1_HUMAN
NC score	0.914219 (rank : 67)	θ value	1.133e-10 (rank : 78)
Query Neighborhood Hits	431	Target Neighborhood Hits	330	Shared Neighborhood Hits	309
SwissProt Accessions	P52945, O60594	Gene names	IPF1, PDX1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Pancreas/duodenum homeobox 1) (PDX- 1) (Islet/duodenum homeobox-1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Insulin upstream factor 1) (IUF-1) (Glucose- sensitive factor) (GSF).

MEOX2_MOUSE
NC score	0.913017 (rank : 68)	θ value	3.64472e-09 (rank : 119)
Query Neighborhood Hits	431	Target Neighborhood Hits	341	Shared Neighborhood Hits	313
SwissProt Accessions	P32443, Q544T6	Gene names	Meox2, Gax, Mox-2, Mox2
Domain Architecture
Description	Homeobox protein MOX-2 (Mesenchyme homeobox 2).

MEOX2_HUMAN
NC score	0.912847 (rank : 69)	θ value	3.64472e-09 (rank : 118)
Query Neighborhood Hits	431	Target Neighborhood Hits	340	Shared Neighborhood Hits	313
SwissProt Accessions	P50222, O75263, Q9UPL6	Gene names	MEOX2, GAX, MOX2
Domain Architecture
Description	Homeobox protein MOX-2 (Mesenchyme homeobox 2) (Growth arrest-specific homeobox).

DLX5_HUMAN
NC score	0.911954 (rank : 70)	θ value	1.74796e-11 (rank : 49)
Query Neighborhood Hits	431	Target Neighborhood Hits	405	Shared Neighborhood Hits	327
SwissProt Accessions	P56178, Q9UPL1	Gene names	DLX5
Domain Architecture
Description	Homeobox protein DLX-5.

DLX5_MOUSE
NC score	0.910216 (rank : 71)	θ value	1.74796e-11 (rank : 50)
Query Neighborhood Hits	431	Target Neighborhood Hits	434	Shared Neighborhood Hits	330
SwissProt Accessions	P70396, O54876, O54877, O54878, Q9JJ45	Gene names	Dlx5
Domain Architecture
Description	Homeobox protein DLX-5.

MEOX1_MOUSE
NC score	0.905954 (rank : 72)	θ value	1.99992e-07 (rank : 173)
Query Neighborhood Hits	431	Target Neighborhood Hits	345	Shared Neighborhood Hits	316
SwissProt Accessions	P32442	Gene names	Meox1, Mox-1, Mox1
Domain Architecture
Description	Homeobox protein MOX-1 (Mesenchyme homeobox 1).

GSH2_HUMAN
NC score	0.905054 (rank : 73)	θ value	1.53129e-07 (rank : 169)
Query Neighborhood Hits	431	Target Neighborhood Hits	324	Shared Neighborhood Hits	308
SwissProt Accessions	Q9BZM3	Gene names	GSH2
Domain Architecture
Description	Homeobox protein GSH-2.

GSH2_MOUSE
NC score	0.904499 (rank : 74)	θ value	8.97725e-08 (rank : 163)
Query Neighborhood Hits	431	Target Neighborhood Hits	319	Shared Neighborhood Hits	306
SwissProt Accessions	P31316	Gene names	Gsh2, Gsh-2
Domain Architecture
Description	Homeobox protein GSH-2.

GSHI_MOUSE
NC score	0.904442 (rank : 75)	θ value	2.36244e-08 (rank : 143)
Query Neighborhood Hits	431	Target Neighborhood Hits	313	Shared Neighborhood Hits	305
SwissProt Accessions	P31315	Gene names	Gsh1, Gsh-1
Domain Architecture
Description	Homeobox protein GSH-1.

MEOX1_HUMAN
NC score	0.903400 (rank : 76)	θ value	4.45536e-07 (rank : 182)
Query Neighborhood Hits	431	Target Neighborhood Hits	342	Shared Neighborhood Hits	310
SwissProt Accessions	P50221	Gene names	MEOX1, MOX1
Domain Architecture
Description	Homeobox protein MOX-1 (Mesenchyme homeobox 1).

GSHI_HUMAN
NC score	0.903084 (rank : 77)	θ value	1.99992e-07 (rank : 171)
Query Neighborhood Hits	431	Target Neighborhood Hits	314	Shared Neighborhood Hits	307
SwissProt Accessions	Q9H4S2	Gene names	GSH1
Domain Architecture
Description	Homeobox protein GSH-1.

HXB1_MOUSE
NC score	0.902969 (rank : 78)	θ value	2.61198e-07 (rank : 175)
Query Neighborhood Hits	431	Target Neighborhood Hits	341	Shared Neighborhood Hits	319
SwissProt Accessions	P17919, Q3ZAY6, Q9CYH3	Gene names	Hoxb1, Hox-2.9, Hoxb-1
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2.9).

CDX1_HUMAN
NC score	0.901769 (rank : 79)	θ value	3.08544e-08 (rank : 146)
Query Neighborhood Hits	431	Target Neighborhood Hits	382	Shared Neighborhood Hits	317
SwissProt Accessions	P47902, Q4VAU4, Q9NYK8	Gene names	CDX1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

HXB1_HUMAN
NC score	0.901095 (rank : 80)	θ value	1.99992e-07 (rank : 172)
Query Neighborhood Hits	431	Target Neighborhood Hits	356	Shared Neighborhood Hits	318
SwissProt Accessions	P14653	Gene names	HOXB1, HOX2I
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2I).

HXA1_MOUSE
NC score	0.901007 (rank : 81)	θ value	3.08544e-08 (rank : 149)
Query Neighborhood Hits	431	Target Neighborhood Hits	341	Shared Neighborhood Hits	318
SwissProt Accessions	P09022, P15463	Gene names	Hoxa1, Era-1, Hox-1.6, Hoxa-1
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein ERA-1-399).

CDX1_MOUSE
NC score	0.900607 (rank : 82)	θ value	6.87365e-08 (rank : 157)
Query Neighborhood Hits	431	Target Neighborhood Hits	379	Shared Neighborhood Hits	314
SwissProt Accessions	P18111, Q8VCF7	Gene names	Cdx1, Cdx-1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

HXA2_MOUSE
NC score	0.900551 (rank : 83)	θ value	1.133e-10 (rank : 74)
Query Neighborhood Hits	431	Target Neighborhood Hits	338	Shared Neighborhood Hits	310
SwissProt Accessions	P31245, Q149U3, Q920T8	Gene names	Hoxa2, Hox-1.11, Hoxa-2
Domain Architecture
Description	Homeobox protein Hox-A2 (Hox-1.11) (Hox1.11).

TITF1_MOUSE
NC score	0.900500 (rank : 84)	θ value	1.133e-10 (rank : 81)
Query Neighborhood Hits	431	Target Neighborhood Hits	335	Shared Neighborhood Hits	314
SwissProt Accessions	P50220	Gene names	Titf1, Nkx-2.1, Nkx2-1, Ttf1
Domain Architecture	No domain graphic available
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1).

NKX24_MOUSE
NC score	0.899943 (rank : 85)	θ value	9.59137e-10 (rank : 98)
Query Neighborhood Hits	431	Target Neighborhood Hits	356	Shared Neighborhood Hits	313
SwissProt Accessions	Q9EQM3, Q9EQM4	Gene names	Nkx2-4, Nkx2d
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

HXA1_HUMAN
NC score	0.899758 (rank : 86)	θ value	5.26297e-08 (rank : 156)
Query Neighborhood Hits	431	Target Neighborhood Hits	334	Shared Neighborhood Hits	315
SwissProt Accessions	P49639, O43363	Gene names	HOXA1, HOX1F
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1F).

HXB2_MOUSE
NC score	0.899500 (rank : 87)	θ value	3.08544e-08 (rank : 151)
Query Neighborhood Hits	431	Target Neighborhood Hits	350	Shared Neighborhood Hits	312
SwissProt Accessions	P0C1T1	Gene names	Hoxb2, Hox-2.8
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-B2 (Hox-2.8).

TITF1_HUMAN
NC score	0.898790 (rank : 88)	θ value	1.133e-10 (rank : 80)
Query Neighborhood Hits	431	Target Neighborhood Hits	332	Shared Neighborhood Hits	313
SwissProt Accessions	P43699, O14954, O14955, Q9BRJ8	Gene names	TITF1, NKX2-1, NKX2A, TTF1
Domain Architecture
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1) (Homeobox protein NK-2 homolog A).

HME2_HUMAN
NC score	0.898575 (rank : 89)	θ value	1.17247e-07 (rank : 165)
Query Neighborhood Hits	431	Target Neighborhood Hits	355	Shared Neighborhood Hits	321
SwissProt Accessions	P19622	Gene names	EN2
Domain Architecture
Description	Homeobox protein engrailed-2 (Hu-En-2).

HME1_HUMAN
NC score	0.898200 (rank : 90)	θ value	1.06045e-08 (rank : 132)
Query Neighborhood Hits	431	Target Neighborhood Hits	384	Shared Neighborhood Hits	324
SwissProt Accessions	Q05925	Gene names	EN1
Domain Architecture
Description	Homeobox protein engrailed-1 (Hu-En-1).

HXA2_HUMAN
NC score	0.898132 (rank : 91)	θ value	1.133e-10 (rank : 73)
Query Neighborhood Hits	431	Target Neighborhood Hits	370	Shared Neighborhood Hits	310
SwissProt Accessions	O43364	Gene names	HOXA2
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A2.

EVX1_MOUSE
NC score	0.898128 (rank : 92)	θ value	3.08544e-08 (rank : 148)
Query Neighborhood Hits	431	Target Neighborhood Hits	350	Shared Neighborhood Hits	312
SwissProt Accessions	P23683	Gene names	Evx1
Domain Architecture
Description	Homeobox even-skipped homolog protein 1 (EVX-1).

HME1_MOUSE
NC score	0.897892 (rank : 93)	θ value	1.06045e-08 (rank : 133)
Query Neighborhood Hits	431	Target Neighborhood Hits	397	Shared Neighborhood Hits	325
SwissProt Accessions	P09065	Gene names	En1, En-1
Domain Architecture
Description	Homeobox protein engrailed-1 (Mo-En-1).

NKX22_HUMAN
NC score	0.897756 (rank : 94)	θ value	2.13673e-09 (rank : 111)
Query Neighborhood Hits	431	Target Neighborhood Hits	342	Shared Neighborhood Hits	318
SwissProt Accessions	O95096	Gene names	NKX2-2, NKX2.2, NKX2B
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

NKX22_MOUSE
NC score	0.897066 (rank : 95)	θ value	2.13673e-09 (rank : 112)
Query Neighborhood Hits	431	Target Neighborhood Hits	336	Shared Neighborhood Hits	316
SwissProt Accessions	P42586	Gene names	Nkx2-2, Nkx-2.2, Nkx2b
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

HME2_MOUSE
NC score	0.897016 (rank : 96)	θ value	1.17247e-07 (rank : 166)
Query Neighborhood Hits	431	Target Neighborhood Hits	352	Shared Neighborhood Hits	321
SwissProt Accessions	P09066	Gene names	En2, En-2
Domain Architecture
Description	Homeobox protein engrailed-2 (Mo-En-2).

NKX24_HUMAN
NC score	0.896893 (rank : 97)	θ value	9.59137e-10 (rank : 97)
Query Neighborhood Hits	431	Target Neighborhood Hits	366	Shared Neighborhood Hits	317
SwissProt Accessions	Q9H2Z4	Gene names	NKX2-4, NKX2D
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

EVX2_MOUSE
NC score	0.896396 (rank : 98)	θ value	4.45536e-07 (rank : 180)
Query Neighborhood Hits	431	Target Neighborhood Hits	327	Shared Neighborhood Hits	307
SwissProt Accessions	P49749	Gene names	Evx2, Evx-2
Domain Architecture
Description	Homeobox even-skipped homolog protein 2 (EVX-2).

EVX2_HUMAN
NC score	0.895921 (rank : 99)	θ value	4.45536e-07 (rank : 179)
Query Neighborhood Hits	431	Target Neighborhood Hits	325	Shared Neighborhood Hits	304
SwissProt Accessions	Q03828	Gene names	EVX2
Domain Architecture
Description	Homeobox even-skipped homolog protein 2 (EVX-2).

HXD1_MOUSE
NC score	0.895351 (rank : 100)	θ value	1.53129e-07 (rank : 170)
Query Neighborhood Hits	431	Target Neighborhood Hits	381	Shared Neighborhood Hits	319
SwissProt Accessions	Q01822	Gene names	Hoxd1, Hox-4.9, Hoxd-1
Domain Architecture
Description	Homeobox protein Hox-D1 (Hox-4.9).

CDX2_MOUSE
NC score	0.895304 (rank : 101)	θ value	5.81887e-07 (rank : 183)
Query Neighborhood Hits	431	Target Neighborhood Hits	336	Shared Neighborhood Hits	307
SwissProt Accessions	P43241	Gene names	Cdx2, Cdx-2
Domain Architecture
Description	Homeobox protein CDX-2 (Caudal-type homeobox protein 2).

HXC4_MOUSE
NC score	0.894670 (rank : 102)	θ value	2.28291e-11 (rank : 56)
Query Neighborhood Hits	431	Target Neighborhood Hits	365	Shared Neighborhood Hits	322
SwissProt Accessions	Q08624	Gene names	Hoxc4, Hox-3.5, Hoxc-4
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3.5).

EVX1_HUMAN
NC score	0.894432 (rank : 103)	θ value	3.08544e-08 (rank : 147)
Query Neighborhood Hits	431	Target Neighborhood Hits	349	Shared Neighborhood Hits	310
SwissProt Accessions	P49640	Gene names	EVX1
Domain Architecture
Description	Homeobox even-skipped homolog protein 1 (EVX-1).

HXA4_HUMAN
NC score	0.894366 (rank : 104)	θ value	1.133e-10 (rank : 75)
Query Neighborhood Hits	431	Target Neighborhood Hits	370	Shared Neighborhood Hits	318
SwissProt Accessions	Q00056, O43366	Gene names	HOXA4, HOX1D
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4).

HXA4_MOUSE
NC score	0.893834 (rank : 105)	θ value	1.133e-10 (rank : 76)
Query Neighborhood Hits	431	Target Neighborhood Hits	379	Shared Neighborhood Hits	312
SwissProt Accessions	P06798, Q61684, Q64388, Q8BPE6	Gene names	Hoxa4, Hox-1.4, Hoxa-4
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1.4) (Homeobox protein MH-3).

RX_HUMAN
NC score	0.893012 (rank : 106)	θ value	6.21693e-09 (rank : 126)
Query Neighborhood Hits	431	Target Neighborhood Hits	423	Shared Neighborhood Hits	333
SwissProt Accessions	Q9Y2V3	Gene names	RAX, RX
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

HXD1_HUMAN
NC score	0.892884 (rank : 107)	θ value	4.45536e-07 (rank : 181)
Query Neighborhood Hits	431	Target Neighborhood Hits	337	Shared Neighborhood Hits	315
SwissProt Accessions	Q9GZZ0	Gene names	HOXD1
Domain Architecture
Description	Homeobox protein Hox-D1.

CDX4_HUMAN
NC score	0.892657 (rank : 108)	θ value	5.81887e-07 (rank : 184)
Query Neighborhood Hits	431	Target Neighborhood Hits	366	Shared Neighborhood Hits	314
SwissProt Accessions	O14627, Q5JS20	Gene names	CDX4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

HXA7_MOUSE
NC score	0.892298 (rank : 109)	θ value	1.2105e-12 (rank : 26)
Query Neighborhood Hits	431	Target Neighborhood Hits	318	Shared Neighborhood Hits	304
SwissProt Accessions	P02830, Q544P0	Gene names	Hoxa7, Hox-1.1, Hoxa-7
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1.1) (M6-12) (M6).

HXB4_HUMAN
NC score	0.892298 (rank : 110)	θ value	6.64225e-11 (rank : 68)
Query Neighborhood Hits	431	Target Neighborhood Hits	376	Shared Neighborhood Hits	321
SwissProt Accessions	P17483, Q9NTA0	Gene names	HOXB4, HOX2F
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6).

HXB2_HUMAN
NC score	0.892298 (rank : 111)	θ value	3.08544e-08 (rank : 150)
Query Neighborhood Hits	431	Target Neighborhood Hits	367	Shared Neighborhood Hits	315
SwissProt Accessions	P14652, P10913, P17485	Gene names	HOXB2, HOX2H
Domain Architecture
Description	Homeobox protein Hox-B2 (Hox-2H) (Hox-2.8) (K8).

CDX2_HUMAN
NC score	0.892191 (rank : 112)	θ value	1.53129e-07 (rank : 168)
Query Neighborhood Hits	431	Target Neighborhood Hits	330	Shared Neighborhood Hits	305
SwissProt Accessions	Q99626, O00503, Q969L8	Gene names	CDX2, CDX3
Domain Architecture
Description	Homeobox protein CDX-2 (Caudal-type homeobox protein 2) (CDX-3).

RX_MOUSE
NC score	0.891452 (rank : 113)	θ value	1.47974e-10 (rank : 86)
Query Neighborhood Hits	431	Target Neighborhood Hits	429	Shared Neighborhood Hits	327
SwissProt Accessions	O35602, O08748	Gene names	Rax, Rx
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

HXD4_HUMAN
NC score	0.890592 (rank : 114)	θ value	1.133e-10 (rank : 77)
Query Neighborhood Hits	431	Target Neighborhood Hits	337	Shared Neighborhood Hits	305
SwissProt Accessions	P09016, Q96AU0	Gene names	HOXD4, HOX4B
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4B) (Hox-5.1) (HHO.C13).

HXC4_HUMAN
NC score	0.890537 (rank : 115)	θ value	2.28291e-11 (rank : 55)
Query Neighborhood Hits	431	Target Neighborhood Hits	361	Shared Neighborhood Hits	322
SwissProt Accessions	P09017	Gene names	HOXC4, HOX3E
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3E) (CP19).

HXA7_HUMAN
NC score	0.890508 (rank : 116)	θ value	1.2105e-12 (rank : 25)
Query Neighborhood Hits	431	Target Neighborhood Hits	309	Shared Neighborhood Hits	303
SwissProt Accessions	P31268, O43368, O43486, O95655, Q9NSC8, Q9UDM1	Gene names	HOXA7, HOX1A
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1A) (Hox 1.1).

ARX_HUMAN
NC score	0.890002 (rank : 117)	θ value	2.13673e-09 (rank : 109)
Query Neighborhood Hits	431	Target Neighborhood Hits	401	Shared Neighborhood Hits	319
SwissProt Accessions	Q96QS3	Gene names	ARX
Domain Architecture
Description	Homeobox protein ARX (Aristaless-related homeobox).

HXB4_MOUSE
NC score	0.889725 (rank : 118)	θ value	6.64225e-11 (rank : 69)
Query Neighborhood Hits	431	Target Neighborhood Hits	375	Shared Neighborhood Hits	320
SwissProt Accessions	P10284, Q3UZB4, Q4VBG0	Gene names	Hoxb4, Hox-2.6, Hoxb-4
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2.6).

HXB7_MOUSE
NC score	0.889215 (rank : 119)	θ value	8.67504e-11 (rank : 72)
Query Neighborhood Hits	431	Target Neighborhood Hits	314	Shared Neighborhood Hits	304
SwissProt Accessions	P09024, Q3UW15	Gene names	Hoxb7, Hox-2.3, Hoxb-7
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (Homeobox protein MH-22B).

PEPP2_HUMAN
NC score	0.888774 (rank : 120)	θ value	3.77169e-06 (rank : 193)
Query Neighborhood Hits	431	Target Neighborhood Hits	316	Shared Neighborhood Hits	298
SwissProt Accessions	Q9BQY4, Q9BR00	Gene names	PEPP2, THG1
Domain Architecture
Description	Paired-like homeobox protein PEPP-2 (Testis homeobox gene 1).

HXB7_HUMAN
NC score	0.888632 (rank : 121)	θ value	1.9326e-10 (rank : 89)
Query Neighborhood Hits	431	Target Neighborhood Hits	311	Shared Neighborhood Hits	304
SwissProt Accessions	P09629, Q15957	Gene names	HOXB7, HOX2C
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2C) (HHO.C1).

HXD4_MOUSE
NC score	0.888480 (rank : 122)	θ value	1.47974e-10 (rank : 84)
Query Neighborhood Hits	431	Target Neighborhood Hits	339	Shared Neighborhood Hits	301
SwissProt Accessions	P10628, P97451, Q3UXL6	Gene names	Hoxd4, Hox-4.2, Hoxd-4
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4.2) (Hox-5.1).

ARX_MOUSE
NC score	0.887638 (rank : 123)	θ value	2.13673e-09 (rank : 110)
Query Neighborhood Hits	431	Target Neighborhood Hits	398	Shared Neighborhood Hits	317
SwissProt Accessions	O35085, Q9QYT4	Gene names	Arx
Domain Architecture
Description	Homeobox protein ARX (Aristaless-related homeobox).

HXD3_MOUSE
NC score	0.887490 (rank : 124)	θ value	8.11959e-09 (rank : 130)
Query Neighborhood Hits	431	Target Neighborhood Hits	435	Shared Neighborhood Hits	320
SwissProt Accessions	P09027, Q3UUD3	Gene names	Hoxd3, Hox-4.1, Hoxd-3
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4.1) (Homeobox protein MH-19).

PEPP1_HUMAN
NC score	0.887368 (rank : 125)	θ value	2.88788e-06 (rank : 192)
Query Neighborhood Hits	431	Target Neighborhood Hits	338	Shared Neighborhood Hits	314
SwissProt Accessions	Q8NHV9, O95030, Q3SYE0	Gene names	PEPP1, OTEX
Domain Architecture
Description	Paired-like homeobox protein PEPP-1 (Ovary-, testis- and epididymis- expressed gene protein).

HXD3_HUMAN
NC score	0.887113 (rank : 126)	θ value	8.11959e-09 (rank : 129)
Query Neighborhood Hits	431	Target Neighborhood Hits	433	Shared Neighborhood Hits	321
SwissProt Accessions	P31249, Q99955, Q9BSC5	Gene names	HOXD3, HOX4A
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4A).

CDX4_MOUSE
NC score	0.886488 (rank : 127)	θ value	9.92553e-07 (rank : 185)
Query Neighborhood Hits	431	Target Neighborhood Hits	378	Shared Neighborhood Hits	312
SwissProt Accessions	Q07424	Gene names	Cdx4, Cdx-4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

HXA3_HUMAN
NC score	0.886196 (rank : 128)	θ value	1.80886e-08 (rank : 139)
Query Neighborhood Hits	431	Target Neighborhood Hits	535	Shared Neighborhood Hits	339
SwissProt Accessions	O43365	Gene names	HOXA3, HOX1E
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1E).

HXA3_MOUSE
NC score	0.885921 (rank : 129)	θ value	1.80886e-08 (rank : 140)
Query Neighborhood Hits	431	Target Neighborhood Hits	558	Shared Neighborhood Hits	342
SwissProt Accessions	P02831, Q4V9Z8, Q61197	Gene names	Hoxa3, Hox-1.5, Hoxa-3
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1.5) (MO-10).

OTP_MOUSE
NC score	0.885292 (rank : 130)	θ value	1.38499e-08 (rank : 136)
Query Neighborhood Hits	431	Target Neighborhood Hits	387	Shared Neighborhood Hits	325
SwissProt Accessions	O09113	Gene names	Otp
Domain Architecture
Description	Homeobox protein orthopedia.

PHX2A_HUMAN
NC score	0.885085 (rank : 131)	θ value	9.59137e-10 (rank : 99)
Query Neighborhood Hits	431	Target Neighborhood Hits	345	Shared Neighborhood Hits	311
SwissProt Accessions	O14813, Q8IVZ2	Gene names	PHOX2A, ARIX, PMX2A
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (Aristaless homeobox protein homolog) (ARIX1 homeodomain protein).

ESX1L_HUMAN
NC score	0.884898 (rank : 132)	θ value	4.45536e-07 (rank : 178)
Query Neighborhood Hits	431	Target Neighborhood Hits	498	Shared Neighborhood Hits	325
SwissProt Accessions	Q8N693, Q7Z6K7	Gene names	ESX1L, ESX1R
Domain Architecture
Description	Extraembryonic, spermatogenesis, homeobox 1-like protein.

PHX2A_MOUSE
NC score	0.884249 (rank : 133)	θ value	2.52405e-10 (rank : 90)
Query Neighborhood Hits	431	Target Neighborhood Hits	338	Shared Neighborhood Hits	312
SwissProt Accessions	Q62066	Gene names	Phox2a, Arix, Phox2, Pmx2, Pmx2a
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (PHOX2A homeodomain protein) (Aristaless homeobox protein homolog).

PITX3_MOUSE
NC score	0.882863 (rank : 134)	θ value	6.21693e-09 (rank : 125)
Query Neighborhood Hits	431	Target Neighborhood Hits	380	Shared Neighborhood Hits	325
SwissProt Accessions	O35160	Gene names	Pitx3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

PITX3_HUMAN
NC score	0.882463 (rank : 135)	θ value	6.21693e-09 (rank : 124)
Query Neighborhood Hits	431	Target Neighborhood Hits	366	Shared Neighborhood Hits	324
SwissProt Accessions	O75364	Gene names	PITX3, PTX3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

HXC6_HUMAN
NC score	0.881222 (rank : 136)	θ value	1.63604e-09 (rank : 106)
Query Neighborhood Hits	431	Target Neighborhood Hits	306	Shared Neighborhood Hits	299
SwissProt Accessions	P09630	Gene names	HOXC6, HOX3C
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3C) (HHO.C8) (CP25).

HXC6_MOUSE
NC score	0.881222 (rank : 137)	θ value	1.63604e-09 (rank : 107)
Query Neighborhood Hits	431	Target Neighborhood Hits	306	Shared Neighborhood Hits	299
SwissProt Accessions	P10629, Q61683	Gene names	Hoxc6, Hox-3.3, Hoxc-6
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3.3) (Hox-6.1).

GSC_HUMAN
NC score	0.879762 (rank : 138)	θ value	1.63604e-09 (rank : 105)
Query Neighborhood Hits	431	Target Neighborhood Hits	369	Shared Neighborhood Hits	327
SwissProt Accessions	P56915, Q86YR1	Gene names	GSC
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid.

GSC_MOUSE
NC score	0.879440 (rank : 139)	θ value	2.79066e-09 (rank : 115)
Query Neighborhood Hits	431	Target Neighborhood Hits	368	Shared Neighborhood Hits	324
SwissProt Accessions	Q02591	Gene names	Gsc
Domain Architecture
Description	Homeobox protein goosecoid.

HXA5_MOUSE
NC score	0.877795 (rank : 140)	θ value	6.87365e-08 (rank : 159)
Query Neighborhood Hits	431	Target Neighborhood Hits	338	Shared Neighborhood Hits	304
SwissProt Accessions	P09021, Q91VQ5	Gene names	Hoxa5, Hox-1.3, Hoxa-5
Domain Architecture
Description	Homeobox protein Hox-A5 (Hox-1.3) (M2).

HXB5_HUMAN
NC score	0.877660 (rank : 141)	θ value	1.80886e-08 (rank : 141)
Query Neighborhood Hits	431	Target Neighborhood Hits	332	Shared Neighborhood Hits	306
SwissProt Accessions	P09067, P09069	Gene names	HOXB5, HOX2A
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2A) (HHO.C10) (HU-1).

HXA5_HUMAN
NC score	0.877641 (rank : 142)	θ value	6.87365e-08 (rank : 158)
Query Neighborhood Hits	431	Target Neighborhood Hits	336	Shared Neighborhood Hits	306
SwissProt Accessions	P20719, O43367, Q96CY6	Gene names	HOXA5, HOX1C
Domain Architecture
Description	Homeobox protein Hox-A5 (Hox-1C).

HXC5_HUMAN
NC score	0.877239 (rank : 143)	θ value	4.0297e-08 (rank : 154)
Query Neighborhood Hits	431	Target Neighborhood Hits	316	Shared Neighborhood Hits	299
SwissProt Accessions	Q00444	Gene names	HOXC5, HOX3D
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3D) (CP11).

HXB6_MOUSE
NC score	0.877239 (rank : 144)	θ value	1.25267e-09 (rank : 101)
Query Neighborhood Hits	431	Target Neighborhood Hits	309	Shared Neighborhood Hits	302
SwissProt Accessions	P09023	Gene names	Hoxb6, Hox-2.2, Hoxb-6
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2.2) (Homeobox protein MH-22A).

HXB6_HUMAN
NC score	0.877182 (rank : 145)	θ value	5.62301e-10 (rank : 93)
Query Neighborhood Hits	431	Target Neighborhood Hits	307	Shared Neighborhood Hits	302
SwissProt Accessions	P17509, P09068, Q9HB11, Q9UGH2	Gene names	HOXB6, HOX2B
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2B) (Hox-2.2) (HU-2).

HXB5_MOUSE
NC score	0.876995 (rank : 146)	θ value	1.80886e-08 (rank : 142)
Query Neighborhood Hits	431	Target Neighborhood Hits	337	Shared Neighborhood Hits	307
SwissProt Accessions	P09079, Q3ZAY8	Gene names	Hoxb5, Hox-2.1, Hoxb-5
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2.1) (MU-1) (H24.1).

HXC5_MOUSE
NC score	0.876678 (rank : 147)	θ value	4.0297e-08 (rank : 155)
Query Neighborhood Hits	431	Target Neighborhood Hits	316	Shared Neighborhood Hits	298
SwissProt Accessions	P32043, Q8BJW4	Gene names	Hoxc5, Hox-3.4, Hoxc-5
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3.4) (Hox-6.2).

HXB3_MOUSE
NC score	0.876365 (rank : 148)	θ value	2.36244e-08 (rank : 145)
Query Neighborhood Hits	431	Target Neighborhood Hits	493	Shared Neighborhood Hits	319
SwissProt Accessions	P09026, P10285, Q4PJ06, Q61680	Gene names	Hoxb3, Hox-2.7, Hoxb-3
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2.7) (Homeobox protein MH-23).

PRRXL_MOUSE
NC score	0.875007 (rank : 149)	θ value	1.63604e-09 (rank : 108)
Query Neighborhood Hits	431	Target Neighborhood Hits	350	Shared Neighborhood Hits	321
SwissProt Accessions	Q8BYH0, Q8K3F8	Gene names	Prrxl1, Drg11
Domain Architecture	No domain graphic available
Description	Paired-related homeobox protein-like 1 (Dorsal root ganglion 11) (Homeobox protein DRG11).

GSCL_HUMAN
NC score	0.874707 (rank : 150)	θ value	1.29631e-06 (rank : 189)
Query Neighborhood Hits	431	Target Neighborhood Hits	343	Shared Neighborhood Hits	315
SwissProt Accessions	O15499	Gene names	GSCL
Domain Architecture
Description	Homeobox protein goosecoid-like (GSC-2).

HXB8_MOUSE
NC score	0.874703 (rank : 151)	θ value	2.0648e-12 (rank : 31)
Query Neighborhood Hits	431	Target Neighborhood Hits	325	Shared Neighborhood Hits	314
SwissProt Accessions	P09632	Gene names	Hoxb8, Hox-2.4, Hoxb-8
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2.4).

HXC8_MOUSE
NC score	0.874683 (rank : 152)	θ value	1.2105e-12 (rank : 28)
Query Neighborhood Hits	431	Target Neighborhood Hits	327	Shared Neighborhood Hits	307
SwissProt Accessions	P09025	Gene names	Hoxc8, Hox-3.1, Hoxc-8
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3.1) (M31).

HXC8_HUMAN
NC score	0.874644 (rank : 153)	θ value	1.2105e-12 (rank : 27)
Query Neighborhood Hits	431	Target Neighborhood Hits	327	Shared Neighborhood Hits	307
SwissProt Accessions	P31273, O15221, O15362	Gene names	HOXC8, HOX3A
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3A).

PITX1_MOUSE
NC score	0.874196 (rank : 154)	θ value	6.87365e-08 (rank : 161)
Query Neighborhood Hits	431	Target Neighborhood Hits	362	Shared Neighborhood Hits	327
SwissProt Accessions	P70314, O54742, P70427	Gene names	Pitx1, Bft, Potx, Ptx1
Domain Architecture
Description	Pituitary homeobox 1 (Homeobox protein P-OTX) (Pituitary OTX-related factor) (Hindlimb expressed homeobox protein backfoot) (Ptx1).

PITX1_HUMAN
NC score	0.874129 (rank : 155)	θ value	6.87365e-08 (rank : 160)
Query Neighborhood Hits	431	Target Neighborhood Hits	353	Shared Neighborhood Hits	324
SwissProt Accessions	P78337, O14677, O60425, Q9BTI5	Gene names	PITX1, BFT, PTX1
Domain Architecture
Description	Pituitary homeobox 1 (Hindlimb expressed homeobox protein backfoot).

HXB8_HUMAN
NC score	0.874074 (rank : 156)	θ value	7.84624e-12 (rank : 42)
Query Neighborhood Hits	431	Target Neighborhood Hits	324	Shared Neighborhood Hits	313
SwissProt Accessions	P17481, Q9H1I2	Gene names	HOXB8, HOX2D
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2D) (Hox-2.4).

HXA6_MOUSE
NC score	0.874045 (rank : 157)	θ value	7.34386e-10 (rank : 96)
Query Neighborhood Hits	431	Target Neighborhood Hits	304	Shared Neighborhood Hits	299
SwissProt Accessions	P09092, Q9JI98	Gene names	Hoxa6, Hox-1.2, Hoxa-6
Domain Architecture
Description	Homeobox protein Hox-A6 (Hox-1.2) (M5-4).

PITX2_MOUSE
NC score	0.874023 (rank : 158)	θ value	3.08544e-08 (rank : 153)
Query Neighborhood Hits	431	Target Neighborhood Hits	383	Shared Neighborhood Hits	326
SwissProt Accessions	P97474, O08646, O70336, P97933, Q9JLA0, Q9QXB8, Q9R1V9, Q9Z141	Gene names	Pitx2, Arp1, Brx1, Otlx2, Ptx2, Rgs
Domain Architecture
Description	Pituitary homeobox 2 (Orthodenticle-like homeobox 2) (Solurshin) (ALL1-responsive protein ARP1) (BRX1 homeoprotein) (Paired-like homeodomain transcription factor Munc 30).

PITX2_HUMAN
NC score	0.873871 (rank : 159)	θ value	3.08544e-08 (rank : 152)
Query Neighborhood Hits	431	Target Neighborhood Hits	381	Shared Neighborhood Hits	327
SwissProt Accessions	Q99697, O60578, O60579, O60580, Q9BY17	Gene names	PITX2, ARP1, RGS, RIEG, RIEG1
Domain Architecture
Description	Pituitary homeobox 2 (RIEG bicoid-related homeobox transcription factor) (Solurshin) (ALL1-responsive protein ARP1).

HXA6_HUMAN
NC score	0.873777 (rank : 160)	θ value	7.34386e-10 (rank : 95)
Query Neighborhood Hits	431	Target Neighborhood Hits	309	Shared Neighborhood Hits	303
SwissProt Accessions	P31267, Q9UPM0	Gene names	HOXA6, HOX1B
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A6 (Hox-1B).

HXD8_HUMAN
NC score	0.873363 (rank : 161)	θ value	5.08577e-11 (rank : 63)
Query Neighborhood Hits	431	Target Neighborhood Hits	338	Shared Neighborhood Hits	315
SwissProt Accessions	P13378	Gene names	HOXD8, HOX4E
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4).

ALX4_MOUSE
NC score	0.872377 (rank : 162)	θ value	5.62301e-10 (rank : 92)
Query Neighborhood Hits	431	Target Neighborhood Hits	369	Shared Neighborhood Hits	328
SwissProt Accessions	O35137	Gene names	Alx4
Domain Architecture
Description	Homeobox protein aristaless-like 4 (ALX-4).

HXD8_MOUSE
NC score	0.872178 (rank : 163)	θ value	1.47974e-10 (rank : 85)
Query Neighborhood Hits	431	Target Neighborhood Hits	333	Shared Neighborhood Hits	312
SwissProt Accessions	P23463	Gene names	Hoxd8, Hox-4.3, Hoxd-8
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4).

PHX2B_HUMAN
NC score	0.871745 (rank : 164)	θ value	5.08577e-11 (rank : 64)
Query Neighborhood Hits	431	Target Neighborhood Hits	407	Shared Neighborhood Hits	316
SwissProt Accessions	Q99453, Q6PJD9	Gene names	PHOX2B, PMX2B
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

PHX2B_MOUSE
NC score	0.871745 (rank : 165)	θ value	5.08577e-11 (rank : 65)
Query Neighborhood Hits	431	Target Neighborhood Hits	407	Shared Neighborhood Hits	316
SwissProt Accessions	O35690	Gene names	Phox2b, Pmx2b
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

ALX4_HUMAN
NC score	0.870471 (rank : 166)	θ value	5.62301e-10 (rank : 91)
Query Neighborhood Hits	431	Target Neighborhood Hits	394	Shared Neighborhood Hits	325
SwissProt Accessions	Q9H161, Q96JN7, Q9H198, Q9HAY9	Gene names	ALX4, KIAA1788
Domain Architecture
Description	Homeobox protein aristaless-like 4.

HXB3_HUMAN
NC score	0.868335 (rank : 167)	θ value	2.36244e-08 (rank : 144)
Query Neighborhood Hits	431	Target Neighborhood Hits	559	Shared Neighborhood Hits	321
SwissProt Accessions	P14651, O95615, P17484	Gene names	HOXB3, HOX2G
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2G) (Hox-2.7).

HXD12_HUMAN
NC score	0.867853 (rank : 168)	θ value	1.09739e-05 (rank : 202)
Query Neighborhood Hits	431	Target Neighborhood Hits	334	Shared Neighborhood Hits	309
SwissProt Accessions	P35452, Q9NS03	Gene names	HOXD12, HOX4H
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4H).

SHOX_HUMAN
NC score	0.866281 (rank : 169)	θ value	1.17247e-07 (rank : 167)
Query Neighborhood Hits	431	Target Neighborhood Hits	363	Shared Neighborhood Hits	314
SwissProt Accessions	O15266, O00412, O00413, O15267	Gene names	SHOX, PHOG
Domain Architecture
Description	Short stature homeobox protein (Short stature homeobox-containing protein) (Pseudoautosomal homeobox-containing osteogenic protein).

HXD12_MOUSE
NC score	0.865920 (rank : 170)	θ value	6.21693e-09 (rank : 123)
Query Neighborhood Hits	431	Target Neighborhood Hits	370	Shared Neighborhood Hits	310
SwissProt Accessions	P23812	Gene names	Hoxd12, Hox-4.7, Hoxd-12
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4.7) (Hox-5.6).

SHOX2_MOUSE
NC score	0.864798 (rank : 171)	θ value	3.41135e-07 (rank : 177)
Query Neighborhood Hits	431	Target Neighborhood Hits	348	Shared Neighborhood Hits	312
SwissProt Accessions	P70390, P70369	Gene names	Shox2, Og12x, Prx3
Domain Architecture
Description	Short stature homeobox protein 2 (Homeobox protein Og12X) (OG-12) (Paired family homeodomain protein Prx3).

SHOX2_HUMAN
NC score	0.864133 (rank : 172)	θ value	3.41135e-07 (rank : 176)
Query Neighborhood Hits	431	Target Neighborhood Hits	353	Shared Neighborhood Hits	313
SwissProt Accessions	O60902, O60465, O60467, O60903	Gene names	SHOX2, OG12X, SHOT
Domain Architecture
Description	Short stature homeobox protein 2 (Paired-related homeobox protein SHOT) (Homeobox protein Og12X).

HESX1_HUMAN
NC score	0.863870 (rank : 173)	θ value	0.00020696 (rank : 221)
Query Neighborhood Hits	431	Target Neighborhood Hits	326	Shared Neighborhood Hits	307
SwissProt Accessions	Q9UBX0, Q99667	Gene names	HESX1, HANF
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (hAnf).

PRRX2_HUMAN
NC score	0.863732 (rank : 174)	θ value	9.59137e-10 (rank : 100)
Query Neighborhood Hits	431	Target Neighborhood Hits	348	Shared Neighborhood Hits	317
SwissProt Accessions	Q99811, Q9UIB3	Gene names	PRRX2, PMX2, PRX2
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Paired-related homeobox protein 2).

HESX1_MOUSE
NC score	0.863293 (rank : 175)	θ value	0.00228821 (rank : 242)
Query Neighborhood Hits	431	Target Neighborhood Hits	331	Shared Neighborhood Hits	306
SwissProt Accessions	Q61658, Q61047	Gene names	Hesx1, Hes-1, Rpx
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (Anterior- restricted homeobox protein) (Rathke pouch homeo box).

CART1_HUMAN
NC score	0.861311 (rank : 176)	θ value	8.11959e-09 (rank : 127)
Query Neighborhood Hits	431	Target Neighborhood Hits	348	Shared Neighborhood Hits	321
SwissProt Accessions	Q15699, Q546C8, Q96FH4	Gene names	CART1
Domain Architecture
Description	Cartilage homeoprotein 1 (CART-1).

CART1_MOUSE
NC score	0.861080 (rank : 177)	θ value	8.11959e-09 (rank : 128)
Query Neighborhood Hits	431	Target Neighborhood Hits	344	Shared Neighborhood Hits	320
SwissProt Accessions	Q8C8B0, Q8C370	Gene names	Cart1
Domain Architecture	No domain graphic available
Description	Cartilage homeoprotein 1 (CART-1).

ALX3_MOUSE
NC score	0.861020 (rank : 178)	θ value	3.64472e-09 (rank : 117)
Query Neighborhood Hits	431	Target Neighborhood Hits	386	Shared Neighborhood Hits	327
SwissProt Accessions	O70137	Gene names	Alx3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

ALX3_HUMAN
NC score	0.859513 (rank : 179)	θ value	2.79066e-09 (rank : 114)
Query Neighborhood Hits	431	Target Neighborhood Hits	380	Shared Neighborhood Hits	328
SwissProt Accessions	O95076, O95075	Gene names	ALX3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

PROP1_HUMAN
NC score	0.859263 (rank : 180)	θ value	1.43324e-05 (rank : 203)
Query Neighborhood Hits	431	Target Neighborhood Hits	354	Shared Neighborhood Hits	323
SwissProt Accessions	O75360	Gene names	PROP1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

PRRX2_MOUSE
NC score	0.858566 (rank : 181)	θ value	2.13673e-09 (rank : 113)
Query Neighborhood Hits	431	Target Neighborhood Hits	351	Shared Neighborhood Hits	319
SwissProt Accessions	Q06348, Q61651	Gene names	Prrx2, Prx2, S8
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Homeobox protein S8).

GSCL_MOUSE
NC score	0.858311 (rank : 182)	θ value	9.92553e-07 (rank : 188)
Query Neighborhood Hits	431	Target Neighborhood Hits	339	Shared Neighborhood Hits	315
SwissProt Accessions	P56916	Gene names	Gscl
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid-like (GSC-2).

HXD11_MOUSE
NC score	0.854852 (rank : 183)	θ value	0.000158464 (rank : 220)
Query Neighborhood Hits	431	Target Neighborhood Hits	376	Shared Neighborhood Hits	321
SwissProt Accessions	P23813	Gene names	Hoxd11, Hox-4.6, Hoxd-11
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5).

HXD11_HUMAN
NC score	0.854809 (rank : 184)	θ value	0.00035302 (rank : 229)
Query Neighborhood Hits	431	Target Neighborhood Hits	353	Shared Neighborhood Hits	316
SwissProt Accessions	P31277, Q9NS02	Gene names	HOXD11, HOX4F
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4F).

PRRX1_MOUSE
NC score	0.854017 (rank : 185)	θ value	1.25267e-09 (rank : 104)
Query Neighborhood Hits	431	Target Neighborhood Hits	346	Shared Neighborhood Hits	318
SwissProt Accessions	P63013, P43271, Q02810	Gene names	Prrx1, Pmx, Pmx1
Domain Architecture	No domain graphic available
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein mHox) (Homeobox protein K-2).

PRRX1_HUMAN
NC score	0.853941 (rank : 186)	θ value	1.25267e-09 (rank : 103)
Query Neighborhood Hits	431	Target Neighborhood Hits	347	Shared Neighborhood Hits	318
SwissProt Accessions	P54821, O60807	Gene names	PRRX1, PMX1
Domain Architecture
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein PHOX1).

HXC11_HUMAN
NC score	0.848918 (rank : 187)	θ value	0.000270298 (rank : 228)
Query Neighborhood Hits	431	Target Neighborhood Hits	349	Shared Neighborhood Hits	311
SwissProt Accessions	O43248, Q96DH2	Gene names	HOXC11
Domain Architecture
Description	Homeobox protein Hox-C11.

PROP1_MOUSE
NC score	0.847719 (rank : 188)	θ value	2.44474e-05 (rank : 207)
Query Neighborhood Hits	431	Target Neighborhood Hits	361	Shared Neighborhood Hits	322
SwissProt Accessions	P97458	Gene names	Prop1, Prop-1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

HXA11_HUMAN
NC score	0.846574 (rank : 189)	θ value	0.000270298 (rank : 226)
Query Neighborhood Hits	431	Target Neighborhood Hits	334	Shared Neighborhood Hits	302
SwissProt Accessions	P31270	Gene names	HOXA11, HOX1I
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1I).

CHX10_MOUSE
NC score	0.843673 (rank : 190)	θ value	9.92553e-07 (rank : 187)
Query Neighborhood Hits	431	Target Neighborhood Hits	340	Shared Neighborhood Hits	307
SwissProt Accessions	Q61412	Gene names	Chx10, Vsx2
Domain Architecture
Description	Homeobox protein CHX10 (Ceh-10 homeodomain-containing homolog).

HXA9_MOUSE
NC score	0.843564 (rank : 191)	θ value	5.44631e-05 (rank : 216)
Query Neighborhood Hits	431	Target Neighborhood Hits	334	Shared Neighborhood Hits	309
SwissProt Accessions	P09631, O70154, O70155	Gene names	Hoxa9, Hox-1.7, Hoxa-9
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1.7).

CHX10_HUMAN
NC score	0.843409 (rank : 192)	θ value	9.92553e-07 (rank : 186)
Query Neighborhood Hits	431	Target Neighborhood Hits	340	Shared Neighborhood Hits	308
SwissProt Accessions	P58304	Gene names	CHX10, VSX2
Domain Architecture
Description	Homeobox protein CHX10 (Ceh-10 homeodomain-containing homolog).

HXA9_HUMAN
NC score	0.842517 (rank : 193)	θ value	5.44631e-05 (rank : 215)
Query Neighborhood Hits	431	Target Neighborhood Hits	332	Shared Neighborhood Hits	309
SwissProt Accessions	P31269, O43369, O43429, Q99820	Gene names	HOXA9, HOX1G
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1G).

HXA11_MOUSE
NC score	0.841803 (rank : 194)	θ value	0.000270298 (rank : 227)
Query Neighborhood Hits	431	Target Neighborhood Hits	327	Shared Neighborhood Hits	302
SwissProt Accessions	P31311, Q3V026	Gene names	Hoxa11, Hox-1.9, Hoxa-11
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1.9).

HXC12_HUMAN
NC score	0.841798 (rank : 195)	θ value	0.00134147 (rank : 239)
Query Neighborhood Hits	431	Target Neighborhood Hits	313	Shared Neighborhood Hits	303
SwissProt Accessions	P31275, Q9BXJ6	Gene names	HOXC12, HOX3F
Domain Architecture
Description	Homeobox protein Hox-C12 (Hox-3F).

OTX1_HUMAN
NC score	0.841659 (rank : 196)	θ value	2.88788e-06 (rank : 191)
Query Neighborhood Hits	431	Target Neighborhood Hits	379	Shared Neighborhood Hits	323
SwissProt Accessions	P32242, Q53TG6	Gene names	OTX1
Domain Architecture
Description	Homeobox protein OTX1.

HXD9_HUMAN
NC score	0.839980 (rank : 197)	θ value	7.1131e-05 (rank : 217)
Query Neighborhood Hits	431	Target Neighborhood Hits	352	Shared Neighborhood Hits	312
SwissProt Accessions	P28356	Gene names	HOXD9, HOX4C
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4C) (Hox-5.2).

HXC12_MOUSE
NC score	0.839623 (rank : 198)	θ value	0.00134147 (rank : 240)
Query Neighborhood Hits	431	Target Neighborhood Hits	316	Shared Neighborhood Hits	303
SwissProt Accessions	Q8K5B8	Gene names	Hoxc12, Hox-3.8, Hoxc-12
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C12 (Hox-3.8).

CRX_HUMAN
NC score	0.839091 (rank : 199)	θ value	3.19293e-05 (rank : 208)
Query Neighborhood Hits	431	Target Neighborhood Hits	360	Shared Neighborhood Hits	322
SwissProt Accessions	O43186	Gene names	CRX, CORD2
Domain Architecture
Description	Cone-rod homeobox protein.

HXA10_HUMAN
NC score	0.839079 (rank : 200)	θ value	1.87187e-05 (rank : 204)
Query Neighborhood Hits	431	Target Neighborhood Hits	334	Shared Neighborhood Hits	304
SwissProt Accessions	P31260, O43370, O43605, Q15949	Gene names	HOXA10, HOX1H
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1H) (Hox-1.8) (PL).

HXA10_MOUSE
NC score	0.837749 (rank : 201)	θ value	1.87187e-05 (rank : 205)
Query Neighborhood Hits	431	Target Neighborhood Hits	365	Shared Neighborhood Hits	306
SwissProt Accessions	P31310, Q80Y22	Gene names	Hoxa10, Hox-1.8, Hoxa-10
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1.8).

VSX1_MOUSE
NC score	0.837223 (rank : 202)	θ value	6.87365e-08 (rank : 162)
Query Neighborhood Hits	431	Target Neighborhood Hits	356	Shared Neighborhood Hits	303
SwissProt Accessions	Q91V10	Gene names	Vsx1, Rinx
Domain Architecture
Description	Visual system homeobox 1 (Transcription factor VSX1) (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX).

HXC10_HUMAN
NC score	0.836974 (rank : 203)	θ value	6.43352e-06 (rank : 195)
Query Neighborhood Hits	431	Target Neighborhood Hits	417	Shared Neighborhood Hits	314
SwissProt Accessions	Q9NYD6, O15219, O15220, Q9BVD5	Gene names	HOXC10
Domain Architecture
Description	Homeobox protein Hox-C10.

HXC10_MOUSE
NC score	0.836661 (rank : 204)	θ value	6.43352e-06 (rank : 196)
Query Neighborhood Hits	431	Target Neighborhood Hits	417	Shared Neighborhood Hits	312
SwissProt Accessions	P31257, P31312, Q7TMT7	Gene names	Hoxc10, Hox-3.6, Hoxc-10
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C10 (Hox-3.6).

VSX1_HUMAN
NC score	0.836634 (rank : 205)	θ value	1.99992e-07 (rank : 174)
Query Neighborhood Hits	431	Target Neighborhood Hits	344	Shared Neighborhood Hits	309
SwissProt Accessions	Q9NZR4, Q5TF40, Q5TF41, Q9HCU3, Q9NU27	Gene names	VSX1, RINX
Domain Architecture
Description	Visual system homeobox 1 (Transcription factor VSX1) (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX).

CRX_MOUSE
NC score	0.835767 (rank : 206)	θ value	2.44474e-05 (rank : 206)
Query Neighborhood Hits	431	Target Neighborhood Hits	359	Shared Neighborhood Hits	315
SwissProt Accessions	O54751	Gene names	Crx
Domain Architecture
Description	Cone-rod homeobox protein.

HXD9_MOUSE
NC score	0.835577 (rank : 207)	θ value	7.1131e-05 (rank : 218)
Query Neighborhood Hits	431	Target Neighborhood Hits	359	Shared Neighborhood Hits	312
SwissProt Accessions	P28357, Q3UYS2	Gene names	Hoxd9, Hox-4.4, Hoxd-9
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4.4) (Hox-5.2).

OTX1_MOUSE
NC score	0.834615 (rank : 208)	θ value	6.43352e-06 (rank : 197)
Query Neighborhood Hits	431	Target Neighborhood Hits	372	Shared Neighborhood Hits	320
SwissProt Accessions	P80205	Gene names	Otx1, Otx-1
Domain Architecture
Description	Homeobox protein OTX1.

HXD10_HUMAN
NC score	0.834582 (rank : 209)	θ value	1.09739e-05 (rank : 200)
Query Neighborhood Hits	431	Target Neighborhood Hits	392	Shared Neighborhood Hits	317
SwissProt Accessions	P28358	Gene names	HOXD10, HOX4D
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4D) (Hox-4E).

HXD10_MOUSE
NC score	0.834238 (rank : 210)	θ value	1.09739e-05 (rank : 201)
Query Neighborhood Hits	431	Target Neighborhood Hits	392	Shared Neighborhood Hits	315
SwissProt Accessions	P28359, Q91WU9	Gene names	Hoxd10, Hox-4.5, Hoxd-10
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4.5) (Hox-5.3).

HXA13_MOUSE
NC score	0.831280 (rank : 211)	θ value	4.1701e-05 (rank : 212)
Query Neighborhood Hits	431	Target Neighborhood Hits	351	Shared Neighborhood Hits	317
SwissProt Accessions	Q62424	Gene names	Hoxa13, Hox-1.10
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1.10).

HXA13_HUMAN
NC score	0.829823 (rank : 212)	θ value	4.1701e-05 (rank : 211)
Query Neighborhood Hits	431	Target Neighborhood Hits	353	Shared Neighborhood Hits	318
SwissProt Accessions	P31271, O43371	Gene names	HOXA13, HOX1J
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1J).

HXB9_HUMAN
NC score	0.826555 (rank : 213)	θ value	0.00020696 (rank : 222)
Query Neighborhood Hits	431	Target Neighborhood Hits	344	Shared Neighborhood Hits	311
SwissProt Accessions	P17482, Q9H1I1	Gene names	HOXB9, HOX2E
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2E) (Hox-2.5).

HXB9_MOUSE
NC score	0.826186 (rank : 214)	θ value	0.00020696 (rank : 223)
Query Neighborhood Hits	431	Target Neighborhood Hits	344	Shared Neighborhood Hits	309
SwissProt Accessions	P20615	Gene names	Hoxb9, Hox-2.5, Hoxb-9
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2.5).

HXC9_HUMAN
NC score	0.825903 (rank : 215)	θ value	3.19293e-05 (rank : 209)
Query Neighborhood Hits	431	Target Neighborhood Hits	339	Shared Neighborhood Hits	309
SwissProt Accessions	P31274, Q9H1I0	Gene names	HOXC9, HOX3B
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3B).

HXC9_MOUSE
NC score	0.825811 (rank : 216)	θ value	3.19293e-05 (rank : 210)
Query Neighborhood Hits	431	Target Neighborhood Hits	338	Shared Neighborhood Hits	308
SwissProt Accessions	P09633	Gene names	Hoxc9, Hox-3.2, Hoxc-9
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3.2).

HXC13_HUMAN
NC score	0.816362 (rank : 217)	θ value	4.1701e-05 (rank : 213)
Query Neighborhood Hits	431	Target Neighborhood Hits	336	Shared Neighborhood Hits	318
SwissProt Accessions	P31276, Q96J32, Q9NR24, Q9NYD5	Gene names	HOXC13, HOX3G
Domain Architecture
Description	Homeobox protein Hox-C13 (Hox-3G).

HXC13_MOUSE
NC score	0.816246 (rank : 218)	θ value	4.1701e-05 (rank : 214)
Query Neighborhood Hits	431	Target Neighborhood Hits	337	Shared Neighborhood Hits	318
SwissProt Accessions	P50207, Q53Z78, Q920I7	Gene names	Hoxc13, Hoxc-13
Domain Architecture
Description	Homeobox protein Hox-C13.

OTX2_MOUSE
NC score	0.814863 (rank : 219)	θ value	6.43352e-06 (rank : 198)
Query Neighborhood Hits	431	Target Neighborhood Hits	345	Shared Neighborhood Hits	310
SwissProt Accessions	P80206	Gene names	Otx2, Otx-2
Domain Architecture
Description	Homeobox protein OTX2.

OTX2_HUMAN
NC score	0.814482 (rank : 220)	θ value	4.92598e-06 (rank : 194)
Query Neighborhood Hits	431	Target Neighborhood Hits	341	Shared Neighborhood Hits	307
SwissProt Accessions	P32243, Q6GTV3, Q9HAW3, Q9P2R1	Gene names	OTX2
Domain Architecture
Description	Homeobox protein OTX2.

HXB13_MOUSE
NC score	0.810361 (rank : 221)	θ value	0.000786445 (rank : 236)
Query Neighborhood Hits	431	Target Neighborhood Hits	384	Shared Neighborhood Hits	314
SwissProt Accessions	P70321, Q80Y12	Gene names	Hoxb13
Domain Architecture
Description	Homeobox protein Hox-B13.

HXB13_HUMAN
NC score	0.808572 (rank : 222)	θ value	0.000602161 (rank : 232)
Query Neighborhood Hits	431	Target Neighborhood Hits	377	Shared Neighborhood Hits	317
SwissProt Accessions	Q92826, Q96QM4, Q99810	Gene names	HOXB13
Domain Architecture
Description	Homeobox protein Hox-B13.

HXD13_HUMAN
NC score	0.805573 (rank : 223)	θ value	0.00228821 (rank : 243)
Query Neighborhood Hits	431	Target Neighborhood Hits	332	Shared Neighborhood Hits	312
SwissProt Accessions	P35453	Gene names	HOXD13, HOX4I
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4I).

HXD13_MOUSE
NC score	0.805015 (rank : 224)	θ value	0.00228821 (rank : 244)
Query Neighborhood Hits	431	Target Neighborhood Hits	324	Shared Neighborhood Hits	310
SwissProt Accessions	P70217, Q2VPB0, Q2VPB1, Q64177	Gene names	Hoxd13, Hox-4.8
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4.8).

DUX1_HUMAN
NC score	0.800729 (rank : 225)	θ value	0.000270298 (rank : 224)
Query Neighborhood Hits	431	Target Neighborhood Hits	330	Shared Neighborhood Hits	310
SwissProt Accessions	O43812	Gene names	DUX1
Domain Architecture	No domain graphic available
Description	Double homeobox protein 1.

DUX5_HUMAN
NC score	0.796082 (rank : 226)	θ value	0.000270298 (rank : 225)
Query Neighborhood Hits	431	Target Neighborhood Hits	330	Shared Neighborhood Hits	310
SwissProt Accessions	Q96PT3	Gene names	DUX5
Domain Architecture	No domain graphic available
Description	Double homeobox protein 5.

DUX3_HUMAN
NC score	0.794247 (rank : 227)	θ value	0.000121331 (rank : 219)
Query Neighborhood Hits	431	Target Neighborhood Hits	312	Shared Neighborhood Hits	300
SwissProt Accessions	Q96PT4, Q9UND2	Gene names	DUX3
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 3.

PAX4_HUMAN
NC score	0.776081 (rank : 228)	θ value	8.97725e-08 (rank : 164)
Query Neighborhood Hits	431	Target Neighborhood Hits	367	Shared Neighborhood Hits	325
SwissProt Accessions	O43316, O95161, Q6B0H0	Gene names	PAX4
Domain Architecture
Description	Paired box protein Pax-4.

DUX4_HUMAN
NC score	0.772135 (rank : 229)	θ value	8.40245e-06 (rank : 199)
Query Neighborhood Hits	431	Target Neighborhood Hits	403	Shared Neighborhood Hits	323
SwissProt Accessions	Q9UBX2	Gene names	DUX4, DUX10
Domain Architecture	No domain graphic available
Description	Double homeobox protein 4 (Double homeobox protein 10) (Double homeobox protein 4/10).

PAX4_MOUSE
NC score	0.771988 (rank : 230)	θ value	1.29631e-06 (rank : 190)
Query Neighborhood Hits	431	Target Neighborhood Hits	370	Shared Neighborhood Hits	326
SwissProt Accessions	P32115, P97341, Q9QUR1, Q9R091	Gene names	Pax4, Pax-4
Domain Architecture
Description	Paired box protein Pax-4.

PAX7_HUMAN
NC score	0.770839 (rank : 231)	θ value	3.64472e-09 (rank : 120)
Query Neighborhood Hits	431	Target Neighborhood Hits	456	Shared Neighborhood Hits	332
SwissProt Accessions	P23759	Gene names	PAX7, HUP1
Domain Architecture
Description	Paired box protein Pax-7 (HUP1).

PAX7_MOUSE
NC score	0.770039 (rank : 232)	θ value	3.64472e-09 (rank : 121)
Query Neighborhood Hits	431	Target Neighborhood Hits	422	Shared Neighborhood Hits	330
SwissProt Accessions	P47239, Q9ES16	Gene names	Pax7, Pax-7
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-7.

PAX3_MOUSE
NC score	0.764818 (rank : 233)	θ value	1.06045e-08 (rank : 135)
Query Neighborhood Hits	431	Target Neighborhood Hits	478	Shared Neighborhood Hits	324
SwissProt Accessions	P24610, Q3UFQ9, Q8BRE7, Q9CXI6	Gene names	Pax3, Pax-3
Domain Architecture
Description	Paired box protein Pax-3.

PAX3_HUMAN
NC score	0.763736 (rank : 234)	θ value	1.06045e-08 (rank : 134)
Query Neighborhood Hits	431	Target Neighborhood Hits	513	Shared Neighborhood Hits	323
SwissProt Accessions	P23760, Q16448	Gene names	PAX3, HUP2
Domain Architecture
Description	Paired box protein Pax-3 (HUP2).

PAX6_HUMAN
NC score	0.757595 (rank : 235)	θ value	1.38499e-08 (rank : 137)
Query Neighborhood Hits	431	Target Neighborhood Hits	383	Shared Neighborhood Hits	316
SwissProt Accessions	P26367, Q6N006, Q99413	Gene names	PAX6, AN2
Domain Architecture
Description	Paired box protein Pax-6 (Oculorhombin) (Aniridia type II protein).

PAX6_MOUSE
NC score	0.757595 (rank : 236)	θ value	1.38499e-08 (rank : 138)
Query Neighborhood Hits	431	Target Neighborhood Hits	383	Shared Neighborhood Hits	316
SwissProt Accessions	P63015, P32117, P70601, Q62222, Q64037, Q8CEI5, Q8VDB5, Q921Q8	Gene names	Pax6, Pax-6, Sey
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-6 (Oculorhombin).

ZFHX2_HUMAN
NC score	0.562171 (rank : 237)	θ value	0.00102713 (rank : 238)
Query Neighborhood Hits	431	Target Neighborhood Hits	1178	Shared Neighborhood Hits	331
SwissProt Accessions	Q9C0A1	Gene names	ZFHX2, KIAA1762
Domain Architecture
Description	Zinc finger homeobox protein 2.

DUX2_HUMAN
NC score	0.549173 (rank : 238)	θ value	0.00102713 (rank : 237)
Query Neighborhood Hits	431	Target Neighborhood Hits	173	Shared Neighborhood Hits	168
SwissProt Accessions	O75505	Gene names	DUX2
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 2.

LHX2_HUMAN
NC score	0.518942 (rank : 239)	θ value	0.00869519 (rank : 257)
Query Neighborhood Hits	431	Target Neighborhood Hits	432	Shared Neighborhood Hits	304
SwissProt Accessions	P50458, O95860, Q8N1Z3	Gene names	LHX2, LH2
Domain Architecture
Description	LIM/homeobox protein Lhx2 (Homeobox protein LH-2).

LHX2_MOUSE
NC score	0.517846 (rank : 240)	θ value	0.00390308 (rank : 251)
Query Neighborhood Hits	431	Target Neighborhood Hits	431	Shared Neighborhood Hits	304
SwissProt Accessions	Q9Z0S2	Gene names	Lhx2
Domain Architecture
Description	LIM/homeobox protein Lhx2.

LHX3_HUMAN
NC score	0.512669 (rank : 241)	θ value	0.00298849 (rank : 248)
Query Neighborhood Hits	431	Target Neighborhood Hits	474	Shared Neighborhood Hits	330
SwissProt Accessions	Q9UBR4, Q9NZB5, Q9P0I8, Q9P0I9	Gene names	LHX3
Domain Architecture
Description	LIM/homeobox protein Lhx3.

LHX4_HUMAN
NC score	0.510477 (rank : 242)	θ value	0.00228821 (rank : 245)
Query Neighborhood Hits	431	Target Neighborhood Hits	455	Shared Neighborhood Hits	326
SwissProt Accessions	Q969G2, Q8NHE0, Q8TCJ1, Q8WWX2, Q969W2	Gene names	LHX4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

LHX4_MOUSE
NC score	0.509885 (rank : 243)	θ value	0.00298849 (rank : 250)
Query Neighborhood Hits	431	Target Neighborhood Hits	457	Shared Neighborhood Hits	326
SwissProt Accessions	P53776, O08916, Q9R280	Gene names	Lhx4, Gsh-4, Gsh4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

LHX3_MOUSE
NC score	0.506185 (rank : 244)	θ value	0.00298849 (rank : 249)
Query Neighborhood Hits	431	Target Neighborhood Hits	451	Shared Neighborhood Hits	321
SwissProt Accessions	P50481, Q61800, Q61801	Gene names	Lhx3, Lim-3, Lim3, Plim
Domain Architecture
Description	LIM/homeobox protein Lhx3 (Homeobox protein LIM-3) (Homeobox protein P-LIM) (LIM homeobox protein 3).

LHX5_HUMAN
NC score	0.504327 (rank : 245)	θ value	0.00509761 (rank : 255)
Query Neighborhood Hits	431	Target Neighborhood Hits	453	Shared Neighborhood Hits	316
SwissProt Accessions	Q9H2C1	Gene names	LHX5
Domain Architecture
Description	LIM/homeobox protein Lhx5.

LHX5_MOUSE
NC score	0.504147 (rank : 246)	θ value	0.00509761 (rank : 256)
Query Neighborhood Hits	431	Target Neighborhood Hits	456	Shared Neighborhood Hits	316
SwissProt Accessions	P61375, P50459	Gene names	Lhx5
Domain Architecture
Description	LIM/homeobox protein Lhx5.

LMX1A_HUMAN
NC score	0.502993 (rank : 247)	θ value	0.000461057 (rank : 230)
Query Neighborhood Hits	431	Target Neighborhood Hits	406	Shared Neighborhood Hits	303
SwissProt Accessions	Q8TE12, Q8TE11	Gene names	LMX1A
Domain Architecture
Description	LIM homeobox transcription factor 1 alpha (LIM/homeobox protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1).

LHX6_MOUSE
NC score	0.502858 (rank : 248)	θ value	0.0961366 (rank : 290)
Query Neighborhood Hits	431	Target Neighborhood Hits	399	Shared Neighborhood Hits	297
SwissProt Accessions	O88706	Gene names	Lhx6
Domain Architecture
Description	LIM/homeobox protein Lhx6.

LHX1_MOUSE
NC score	0.502203 (rank : 249)	θ value	0.00509761 (rank : 254)
Query Neighborhood Hits	431	Target Neighborhood Hits	453	Shared Neighborhood Hits	315
SwissProt Accessions	P63006, P36199	Gene names	Lhx1, Lim-1, Lim1
Domain Architecture	No domain graphic available
Description	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1).

LHX1_HUMAN
NC score	0.501495 (rank : 250)	θ value	0.00509761 (rank : 253)
Query Neighborhood Hits	431	Target Neighborhood Hits	453	Shared Neighborhood Hits	315
SwissProt Accessions	P48742, Q3MIW0	Gene names	LHX1, LIM1
Domain Architecture
Description	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1).

LMX1A_MOUSE
NC score	0.500834 (rank : 251)	θ value	0.000602161 (rank : 233)
Query Neighborhood Hits	431	Target Neighborhood Hits	405	Shared Neighborhood Hits	302
SwissProt Accessions	Q9JKU8	Gene names	Lmx1a
Domain Architecture
Description	LIM homeobox transcription factor 1 alpha (LIM/homeobox protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1).

LHX61_HUMAN
NC score	0.500154 (rank : 252)	θ value	0.0961366 (rank : 289)
Query Neighborhood Hits	431	Target Neighborhood Hits	412	Shared Neighborhood Hits	296
SwissProt Accessions	Q9UPM6, Q5T7S8, Q9NTK3, Q9UPM5	Gene names	LHX6, LHX6.1
Domain Architecture
Description	LIM/homeobox protein Lhx6.1 (Lhx6).

LHX9_MOUSE
NC score	0.498805 (rank : 253)	θ value	0.0736092 (rank : 285)
Query Neighborhood Hits	431	Target Neighborhood Hits	445	Shared Neighborhood Hits	302
SwissProt Accessions	Q9WUH2, Q9QYQ5, Q9QYQ6, Q9QZ00, Q9WU44	Gene names	Lhx9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

LHX9_HUMAN
NC score	0.498393 (rank : 254)	θ value	0.0736092 (rank : 284)
Query Neighborhood Hits	431	Target Neighborhood Hits	444	Shared Neighborhood Hits	301
SwissProt Accessions	Q9NQ69, Q5VUE3, Q9BYU6, Q9NQ70	Gene names	LHX9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

PO6F2_MOUSE
NC score	0.480544 (rank : 255)	θ value	0.125558 (rank : 294)
Query Neighborhood Hits	431	Target Neighborhood Hits	639	Shared Neighborhood Hits	319
SwissProt Accessions	Q8BJI4	Gene names	Pou6f2
Domain Architecture	No domain graphic available
Description	POU domain, class 6, transcription factor 2.

LHX8_MOUSE
NC score	0.478626 (rank : 256)	θ value	0.0563607 (rank : 280)
Query Neighborhood Hits	431	Target Neighborhood Hits	406	Shared Neighborhood Hits	296
SwissProt Accessions	O35652, O70163, O88707	Gene names	Lhx8, Lhx7
Domain Architecture
Description	LIM/homeobox protein Lhx8 (LIM homeodomain Lhx7) (L3).

PO6F2_HUMAN
NC score	0.478159 (rank : 257)	θ value	0.125558 (rank : 293)
Query Neighborhood Hits	431	Target Neighborhood Hits	618	Shared Neighborhood Hits	314
SwissProt Accessions	P78424, P78425, Q75ME8, Q86UM6, Q9UDS7	Gene names	POU6F2, RPF1
Domain Architecture
Description	POU domain, class 6, transcription factor 2 (Retina-derived POU-domain factor 1) (RPF-1).

LMX1B_MOUSE
NC score	0.477363 (rank : 258)	θ value	0.0330416 (rank : 270)
Query Neighborhood Hits	431	Target Neighborhood Hits	394	Shared Neighborhood Hits	300
SwissProt Accessions	O88609	Gene names	Lmx1b
Domain Architecture
Description	LIM homeobox transcription factor 1 beta (LIM/homeobox protein LMX1B) (LIM-homeobox protein 1.2) (LMX-1.2).

LMX1B_HUMAN
NC score	0.477068 (rank : 259)	θ value	0.0330416 (rank : 269)
Query Neighborhood Hits	431	Target Neighborhood Hits	404	Shared Neighborhood Hits	299
SwissProt Accessions	O60663, O75463	Gene names	LMX1B
Domain Architecture
Description	LIM homeobox transcription factor 1 beta (LIM/homeobox protein LMX1B) (LIM-homeobox protein 1.2) (LMX-1.2).

LHX61_MOUSE
NC score	0.467104 (rank : 260)	θ value	0.163984 (rank : 298)
Query Neighborhood Hits	431	Target Neighborhood Hits	396	Shared Neighborhood Hits	279
SwissProt Accessions	Q9R1R0, Q9R1R1	Gene names	Lhx6.1
Domain Architecture
Description	LIM/homeobox protein Lhx6.1.

PO6F1_HUMAN
NC score	0.457345 (rank : 261)	θ value	0.0431538 (rank : 275)
Query Neighborhood Hits	431	Target Neighborhood Hits	370	Shared Neighborhood Hits	305
SwissProt Accessions	Q14863	Gene names	POU6F1, BRN5, MPOU, TCFB1
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (mPOU homeobox protein) (Brain-specific homeobox/POU domain protein 5) (Brain-5) (Brn-5 protein).

PO6F1_MOUSE
NC score	0.441085 (rank : 262)	θ value	0.0431538 (rank : 276)
Query Neighborhood Hits	431	Target Neighborhood Hits	581	Shared Neighborhood Hits	315
SwissProt Accessions	Q07916, Q91XK3	Gene names	Pou6f1, Emb
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (Octamer-binding transcription factor EMB) (Transcription regulatory protein MCP-1).

ISL2_HUMAN
NC score	0.405513 (rank : 263)	θ value	0.47712 (rank : 311)
Query Neighborhood Hits	431	Target Neighborhood Hits	435	Shared Neighborhood Hits	308
SwissProt Accessions	Q96A47	Gene names	ISL2
Domain Architecture
Description	Insulin gene enhancer protein ISL-2 (Islet-2).

PO2F3_MOUSE
NC score	0.403248 (rank : 264)	θ value	0.0193708 (rank : 264)
Query Neighborhood Hits	431	Target Neighborhood Hits	328	Shared Neighborhood Hits	290
SwissProt Accessions	P31362	Gene names	Pou2f3, Epoc1, Oct11, Otf-11, Otf11
Domain Architecture
Description	POU domain, class 2, transcription factor 3 (Octamer-binding transcription factor 11) (Oct-11) (Epoc-1).

ISL2_MOUSE
NC score	0.403202 (rank : 265)	θ value	1.38821 (rank : 335)
Query Neighborhood Hits	431	Target Neighborhood Hits	426	Shared Neighborhood Hits	299
SwissProt Accessions	Q9CXV0	Gene names	Isl2
Domain Architecture
Description	Insulin gene enhancer protein ISL-2 (Islet-2).

ISL1_HUMAN
NC score	0.401304 (rank : 266)	θ value	1.06291 (rank : 326)
Query Neighborhood Hits	431	Target Neighborhood Hits	421	Shared Neighborhood Hits	303
SwissProt Accessions	P61371, P20663, P47894	Gene names	ISL1
Domain Architecture
Description	Insulin gene enhancer protein ISL-1 (Islet-1).

ISL1_MOUSE
NC score	0.401304 (rank : 267)	θ value	1.06291 (rank : 327)
Query Neighborhood Hits	431	Target Neighborhood Hits	421	Shared Neighborhood Hits	303
SwissProt Accessions	P61372, P20663, P47894, Q812D8	Gene names	Isl1
Domain Architecture
Description	Insulin gene enhancer protein ISL-1 (Islet-1).

PO2F3_HUMAN
NC score	0.397975 (rank : 268)	θ value	0.0563607 (rank : 281)
Query Neighborhood Hits	431	Target Neighborhood Hits	319	Shared Neighborhood Hits	286
SwissProt Accessions	Q9UKI9, Q9UKR7, Q9Y504	Gene names	POU2F3, OTF11, PLA1
Domain Architecture
Description	POU domain, class 2, transcription factor 3 (Octamer-binding transcription factor 11) (Oct-11) (Transcription factor Skn-1) (PLA-1 protein).

PO2F2_MOUSE
NC score	0.394785 (rank : 269)	θ value	0.0330416 (rank : 271)
Query Neighborhood Hits	431	Target Neighborhood Hits	353	Shared Neighborhood Hits	294
SwissProt Accessions	Q00196, Q00197, Q00198, Q00199, Q00200, Q00201, Q05882, Q61995, Q61996, Q64245	Gene names	Pou2f2, Oct2, Otf2
Domain Architecture
Description	POU domain, class 2, transcription factor 2 (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2).

SIX2_MOUSE
NC score	0.393641 (rank : 270)	θ value	0.0113563 (rank : 260)
Query Neighborhood Hits	431	Target Neighborhood Hits	376	Shared Neighborhood Hits	311
SwissProt Accessions	Q62232, P70179	Gene names	Six2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

PO2F2_HUMAN
NC score	0.393607 (rank : 271)	θ value	0.0431538 (rank : 274)
Query Neighborhood Hits	431	Target Neighborhood Hits	379	Shared Neighborhood Hits	292
SwissProt Accessions	P09086, Q16648, Q9BRS4	Gene names	POU2F2, OCT2, OTF2
Domain Architecture
Description	POU domain, class 2, transcription factor 2 (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2).

PO2F1_HUMAN
NC score	0.390544 (rank : 272)	θ value	0.365318 (rank : 309)
Query Neighborhood Hits	431	Target Neighborhood Hits	426	Shared Neighborhood Hits	310
SwissProt Accessions	P14859, Q5TBT7, Q6PK46, Q8NEU9, Q9BPV1	Gene names	POU2F1, OCT1, OTF1
Domain Architecture
Description	POU domain, class 2, transcription factor 1 (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1).

ATBF1_HUMAN
NC score	0.389859 (rank : 273)	θ value	0.0330416 (rank : 267)
Query Neighborhood Hits	431	Target Neighborhood Hits	1547	Shared Neighborhood Hits	353
SwissProt Accessions	Q15911, O15101, Q13719	Gene names	ATBF1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

SIX4_MOUSE
NC score	0.388796 (rank : 274)	θ value	0.0431538 (rank : 277)
Query Neighborhood Hits	431	Target Neighborhood Hits	341	Shared Neighborhood Hits	280
SwissProt Accessions	Q61321, Q61322, Q61323	Gene names	Six4, Arec3
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4) (Skeletal muscle-specific ARE-binding protein AREC3).

ATBF1_MOUSE
NC score	0.387605 (rank : 275)	θ value	0.0330416 (rank : 268)
Query Neighborhood Hits	431	Target Neighborhood Hits	1841	Shared Neighborhood Hits	359
SwissProt Accessions	Q61329	Gene names	Atbf1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

PIT1_HUMAN
NC score	0.378838 (rank : 276)	θ value	0.62314 (rank : 316)
Query Neighborhood Hits	431	Target Neighborhood Hits	292	Shared Neighborhood Hits	267
SwissProt Accessions	P28069, O75757, Q15132, Q15133, Q9UEL3	Gene names	POU1F1, GHF1, PIT1
Domain Architecture
Description	Pituitary-specific positive transcription factor 1 (Pit-1) (Growth hormone factor 1) (GHF-1).

PO2F1_MOUSE
NC score	0.378113 (rank : 277)	θ value	0.62314 (rank : 318)
Query Neighborhood Hits	431	Target Neighborhood Hits	408	Shared Neighborhood Hits	300
SwissProt Accessions	P25425, Q61994, Q63891, Q6Y681, Q7TSD0, Q8BT04, Q8K570, Q99JH0, Q9WTZ4, Q9WTZ5, Q9WTZ6	Gene names	Pou2f1, Oct-1, Otf-1, Otf1
Domain Architecture
Description	POU domain, class 2, transcription factor 1 (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1).

SIX4_HUMAN
NC score	0.374406 (rank : 278)	θ value	0.0193708 (rank : 265)
Query Neighborhood Hits	431	Target Neighborhood Hits	342	Shared Neighborhood Hits	275
SwissProt Accessions	Q9UIU6	Gene names	SIX4
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4).

PBX2_MOUSE
NC score	0.373677 (rank : 279)	θ value	1.06291 (rank : 330)
Query Neighborhood Hits	431	Target Neighborhood Hits	341	Shared Neighborhood Hits	282
SwissProt Accessions	O35984	Gene names	Pbx2
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2).

PBX2_HUMAN
NC score	0.372566 (rank : 280)	θ value	1.06291 (rank : 329)
Query Neighborhood Hits	431	Target Neighborhood Hits	350	Shared Neighborhood Hits	282
SwissProt Accessions	P40425	Gene names	PBX2, G17
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2) (Protein G17).

SIX2_HUMAN
NC score	0.370792 (rank : 281)	θ value	0.0330416 (rank : 272)
Query Neighborhood Hits	431	Target Neighborhood Hits	345	Shared Neighborhood Hits	288
SwissProt Accessions	Q9NPC8, Q9BXH7	Gene names	SIX2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

PBX4_MOUSE
NC score	0.369634 (rank : 282)	θ value	0.163984 (rank : 299)
Query Neighborhood Hits	431	Target Neighborhood Hits	324	Shared Neighborhood Hits	276
SwissProt Accessions	Q99NE9, Q8CFL2, Q99NE8	Gene names	Pbx4
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4).

SIX1_MOUSE
NC score	0.368852 (rank : 283)	θ value	0.000602161 (rank : 235)
Query Neighborhood Hits	431	Target Neighborhood Hits	341	Shared Neighborhood Hits	301
SwissProt Accessions	Q62231, Q8CIL7	Gene names	Six1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX1_HUMAN
NC score	0.368522 (rank : 284)	θ value	0.000602161 (rank : 234)
Query Neighborhood Hits	431	Target Neighborhood Hits	343	Shared Neighborhood Hits	301
SwissProt Accessions	Q15475, Q96H64	Gene names	SIX1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

PIT1_MOUSE
NC score	0.366943 (rank : 285)	θ value	0.62314 (rank : 317)
Query Neighborhood Hits	431	Target Neighborhood Hits	313	Shared Neighborhood Hits	281
SwissProt Accessions	Q00286	Gene names	Pou1f1, Pit-1, Pit1
Domain Architecture
Description	Pituitary-specific positive transcription factor 1 (Pit-1) (Growth hormone factor 1) (GHF-1).

IRX6_MOUSE
NC score	0.354642 (rank : 286)	θ value	0.0961366 (rank : 288)
Query Neighborhood Hits	431	Target Neighborhood Hits	256	Shared Neighborhood Hits	226
SwissProt Accessions	Q9ER75	Gene names	Irx6, Irxb3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

PBX3_MOUSE
NC score	0.351881 (rank : 287)	θ value	1.38821 (rank : 339)
Query Neighborhood Hits	431	Target Neighborhood Hits	306	Shared Neighborhood Hits	272
SwissProt Accessions	O35317, Q925W2	Gene names	Pbx3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PBX3_HUMAN
NC score	0.351841 (rank : 288)	θ value	1.38821 (rank : 338)
Query Neighborhood Hits	431	Target Neighborhood Hits	306	Shared Neighborhood Hits	272
SwissProt Accessions	P40426, Q96PF9, Q96PG0	Gene names	PBX3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PBX1_HUMAN
NC score	0.343362 (rank : 289)	θ value	3.0926 (rank : 368)
Query Neighborhood Hits	431	Target Neighborhood Hits	317	Shared Neighborhood Hits	276
SwissProt Accessions	P40424	Gene names	PBX1, PRL
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1) (Homeobox protein PRL).

PBX1_MOUSE
NC score	0.343362 (rank : 290)	θ value	3.0926 (rank : 369)
Query Neighborhood Hits	431	Target Neighborhood Hits	317	Shared Neighborhood Hits	276
SwissProt Accessions	P41778	Gene names	Pbx1, Pbx-1
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1).

IRX6_HUMAN
NC score	0.340785 (rank : 291)	θ value	0.0148317 (rank : 261)
Query Neighborhood Hits	431	Target Neighborhood Hits	262	Shared Neighborhood Hits	231
SwissProt Accessions	P78412, Q7Z2K0	Gene names	IRX6, IRX7, IRXB3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

IRX4_MOUSE
NC score	0.337636 (rank : 292)	θ value	0.0563607 (rank : 278)
Query Neighborhood Hits	431	Target Neighborhood Hits	286	Shared Neighborhood Hits	247
SwissProt Accessions	Q9QY61	Gene names	Irx4, Irxa3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

IRX4_HUMAN
NC score	0.336746 (rank : 293)	θ value	0.0113563 (rank : 258)
Query Neighborhood Hits	431	Target Neighborhood Hits	276	Shared Neighborhood Hits	247
SwissProt Accessions	P78413, Q9UHR2	Gene names	IRX4, IRXA3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

HOP_MOUSE
NC score	0.328928 (rank : 294)	θ value	5.27518 (rank : 394)
Query Neighborhood Hits	431	Target Neighborhood Hits	102	Shared Neighborhood Hits	93
SwissProt Accessions	Q8R1H0, Q8C1N5, Q8CJ22	Gene names	Hop, Hod, Ob1
Domain Architecture	No domain graphic available
Description	Homeodomain-only protein (Homeobox-only protein) (Odd homeobox protein 1) (mOB1).

HOP_HUMAN
NC score	0.325774 (rank : 295)	θ value	θ > 10 (rank : 440)
Query Neighborhood Hits	431	Target Neighborhood Hits	107	Shared Neighborhood Hits	99
SwissProt Accessions	Q9BPY8, Q8N0V6, Q96CI1	Gene names	HOP, HOD, LAGY, NECC1, OB1
Domain Architecture	No domain graphic available
Description	Homeodomain-only protein (Lung cancer-associated Y protein) (Odd homeobox protein 1) (Not expressed in choriocarcinoma protein 1).

PO4F1_MOUSE
NC score	0.325067 (rank : 296)	θ value	4.03905 (rank : 384)
Query Neighborhood Hits	431	Target Neighborhood Hits	345	Shared Neighborhood Hits	283
SwissProt Accessions	P17208	Gene names	Pou4f1, Brn-3, Brn3, Brn3a
Domain Architecture
Description	POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Brn-3.0).

IRX2_HUMAN
NC score	0.325012 (rank : 297)	θ value	0.00509761 (rank : 252)
Query Neighborhood Hits	431	Target Neighborhood Hits	358	Shared Neighborhood Hits	224
SwissProt Accessions	Q9BZI1, Q7Z2I7	Gene names	IRX2, IRXA2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

PO4F1_HUMAN
NC score	0.321794 (rank : 298)	θ value	4.03905 (rank : 383)
Query Neighborhood Hits	431	Target Neighborhood Hits	342	Shared Neighborhood Hits	283
SwissProt Accessions	Q01851, Q14986, Q15318	Gene names	POU4F1, BRN3A, RDC1
Domain Architecture
Description	POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Oct-T1) (Homeobox/POU domain protein RDC-1).

PO4F2_MOUSE
NC score	0.317631 (rank : 299)	θ value	θ > 10 (rank : 466)
Query Neighborhood Hits	431	Target Neighborhood Hits	312	Shared Neighborhood Hits	279
SwissProt Accessions	Q63934, Q63954	Gene names	Pou4f2, Brn3b
Domain Architecture
Description	POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brn-3B) (Brn-3.2).

PO4F2_HUMAN
NC score	0.316853 (rank : 300)	θ value	θ > 10 (rank : 465)
Query Neighborhood Hits	431	Target Neighborhood Hits	310	Shared Neighborhood Hits	282
SwissProt Accessions	Q12837, Q13883, Q14987	Gene names	POU4F2, BRN3B
Domain Architecture
Description	POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brn-3B).

IRX3_MOUSE
NC score	0.316541 (rank : 301)	θ value	0.125558 (rank : 292)
Query Neighborhood Hits	431	Target Neighborhood Hits	303	Shared Neighborhood Hits	221
SwissProt Accessions	P81067	Gene names	Irx3, Irxb1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

PO4F3_MOUSE
NC score	0.314572 (rank : 302)	θ value	θ > 10 (rank : 468)
Query Neighborhood Hits	431	Target Neighborhood Hits	311	Shared Neighborhood Hits	279
SwissProt Accessions	Q63955	Gene names	Pou4f3, Brn-3c, Brn3c
Domain Architecture
Description	POU domain, class 4, transcription factor 3 (Brain-specific homeobox/POU domain protein 3C) (Brn-3C).

IRX3_HUMAN
NC score	0.314201 (rank : 303)	θ value	0.125558 (rank : 291)
Query Neighborhood Hits	431	Target Neighborhood Hits	342	Shared Neighborhood Hits	220
SwissProt Accessions	P78415, Q7Z4A4, Q7Z4A5, Q8IVC6	Gene names	IRX3, IRXB1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

PO4F3_HUMAN
NC score	0.314171 (rank : 304)	θ value	θ > 10 (rank : 467)
Query Neighborhood Hits	431	Target Neighborhood Hits	307	Shared Neighborhood Hits	279
SwissProt Accessions	Q15319, O60557	Gene names	POU4F3, BRN3C
Domain Architecture
Description	POU domain, class 4, transcription factor 3 (Brain-specific homeobox/POU domain protein 3C) (Brn-3C).

SIX5_HUMAN
NC score	0.309887 (rank : 305)	θ value	0.47712 (rank : 313)
Query Neighborhood Hits	431	Target Neighborhood Hits	386	Shared Neighborhood Hits	250
SwissProt Accessions	Q8N196	Gene names	SIX5, DMAHP
Domain Architecture	No domain graphic available
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein).

SIX6_HUMAN
NC score	0.304045 (rank : 306)	θ value	4.03905 (rank : 385)
Query Neighborhood Hits	431	Target Neighborhood Hits	269	Shared Neighborhood Hits	237
SwissProt Accessions	O95475, Q9P1X8	Gene names	SIX6, OPTX2, SIX9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Homeodomain protein OPTX2).

PO3F3_MOUSE
NC score	0.301009 (rank : 307)	θ value	2.36792 (rank : 356)
Query Neighborhood Hits	431	Target Neighborhood Hits	308	Shared Neighborhood Hits	265
SwissProt Accessions	P31361	Gene names	Pou3f3, Brn-1, Brn1, Otf8
Domain Architecture
Description	POU domain, class 3, transcription factor 3 (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein).

PO3F3_HUMAN
NC score	0.300992 (rank : 308)	θ value	2.36792 (rank : 355)
Query Neighborhood Hits	431	Target Neighborhood Hits	311	Shared Neighborhood Hits	265
SwissProt Accessions	P20264, P78379	Gene names	POU3F3, BRN1, OTF8
Domain Architecture
Description	POU domain, class 3, transcription factor 3 (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein).

IRX2_MOUSE
NC score	0.298436 (rank : 309)	θ value	0.00298849 (rank : 247)
Query Neighborhood Hits	431	Target Neighborhood Hits	264	Shared Neighborhood Hits	215
SwissProt Accessions	P81066, O55121, Q9ERN1	Gene names	Irx2, Irxa2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

SIX6_MOUSE
NC score	0.297757 (rank : 310)	θ value	4.03905 (rank : 386)
Query Neighborhood Hits	431	Target Neighborhood Hits	267	Shared Neighborhood Hits	238
SwissProt Accessions	Q9QZ28, O88423	Gene names	Six6, Optx2, Six9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Six9 protein).

SIX3_HUMAN
NC score	0.296812 (rank : 311)	θ value	5.27518 (rank : 398)
Query Neighborhood Hits	431	Target Neighborhood Hits	285	Shared Neighborhood Hits	250
SwissProt Accessions	O95343	Gene names	SIX3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SIX3_MOUSE
NC score	0.296757 (rank : 312)	θ value	5.27518 (rank : 399)
Query Neighborhood Hits	431	Target Neighborhood Hits	289	Shared Neighborhood Hits	250
SwissProt Accessions	Q62233, P70176, P70177	Gene names	Six3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

PO3F2_MOUSE
NC score	0.296339 (rank : 313)	θ value	3.0926 (rank : 371)
Query Neighborhood Hits	431	Target Neighborhood Hits	313	Shared Neighborhood Hits	269
SwissProt Accessions	P31360	Gene names	Pou3f2, Brn-2, Brn2, Otf7
Domain Architecture
Description	POU domain, class 3, transcription factor 2 (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2).

PO3F2_HUMAN
NC score	0.296333 (rank : 314)	θ value	3.0926 (rank : 370)
Query Neighborhood Hits	431	Target Neighborhood Hits	308	Shared Neighborhood Hits	269
SwissProt Accessions	P20265, Q14960, Q86V54, Q9UJL0	Gene names	POU3F2, BRN2, OCT7, OTF7
Domain Architecture
Description	POU domain, class 3, transcription factor 2 (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2).

IRX5_HUMAN
NC score	0.296032 (rank : 315)	θ value	0.0431538 (rank : 273)
Query Neighborhood Hits	431	Target Neighborhood Hits	362	Shared Neighborhood Hits	216
SwissProt Accessions	P78411, P78416, Q7Z2E1	Gene names	IRX5, IRX2A, IRXB2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2) (IRX-2A).

IRX1_HUMAN
NC score	0.294002 (rank : 316)	θ value	0.365318 (rank : 305)
Query Neighborhood Hits	431	Target Neighborhood Hits	285	Shared Neighborhood Hits	221
SwissProt Accessions	P78414, Q7Z2F8, Q8N312	Gene names	IRX1, IRXA1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX1_MOUSE
NC score	0.289917 (rank : 317)	θ value	0.365318 (rank : 306)
Query Neighborhood Hits	431	Target Neighborhood Hits	269	Shared Neighborhood Hits	217
SwissProt Accessions	P81068, O55120, Q9JLL6	Gene names	Irx1, Irxa1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX5_MOUSE
NC score	0.287370 (rank : 318)	θ value	0.0563607 (rank : 279)
Query Neighborhood Hits	431	Target Neighborhood Hits	324	Shared Neighborhood Hits	216
SwissProt Accessions	Q9JKQ4, Q80WV4, Q9JLL5	Gene names	Irx5, Irxb2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2).

PO5F1_MOUSE
NC score	0.284982 (rank : 319)	θ value	1.81305 (rank : 349)
Query Neighborhood Hits	431	Target Neighborhood Hits	305	Shared Neighborhood Hits	256
SwissProt Accessions	P20263, Q63843	Gene names	Pou5f1, Oct-3, Oct-4, Otf-3, Otf3
Domain Architecture
Description	POU domain, class 5, transcription factor 1 (Octamer-binding transcription factor 3) (Oct-3) (Oct-4) (NF-A3).

PO5F1_HUMAN
NC score	0.272413 (rank : 320)	θ value	2.36792 (rank : 357)
Query Neighborhood Hits	431	Target Neighborhood Hits	321	Shared Neighborhood Hits	266
SwissProt Accessions	Q01860, P31359, Q15167, Q15168, Q16422	Gene names	POU5F1, OCT3, OCT4, OTF3
Domain Architecture
Description	POU domain, class 5, transcription factor 1 (Octamer-binding transcription factor 3) (Oct-3) (Oct-4).

PO3F1_MOUSE
NC score	0.269413 (rank : 321)	θ value	6.88961 (rank : 414)
Query Neighborhood Hits	431	Target Neighborhood Hits	261	Shared Neighborhood Hits	234
SwissProt Accessions	P21952	Gene names	Pou3f1, Oct6, Otf-6, Otf6, Scip
Domain Architecture
Description	POU domain, class 3, transcription factor 1 (Octamer-binding transcription factor 6) (Oct-6) (POU-domain transcription factor SCIP).

PO3F1_HUMAN
NC score	0.266376 (rank : 322)	θ value	6.88961 (rank : 413)
Query Neighborhood Hits	431	Target Neighborhood Hits	256	Shared Neighborhood Hits	234
SwissProt Accessions	Q03052	Gene names	POU3F1, OCT6, OTF6
Domain Architecture
Description	POU domain, class 3, transcription factor 1 (Octamer-binding transcription factor 6) (Oct-6) (POU-domain transcription factor SCIP).

PO3F4_MOUSE
NC score	0.254883 (rank : 323)	θ value	4.03905 (rank : 382)
Query Neighborhood Hits	431	Target Neighborhood Hits	281	Shared Neighborhood Hits	236
SwissProt Accessions	P62515, P25216	Gene names	Pou3f4, Brn-4, Brn4, Otf9
Domain Architecture	No domain graphic available
Description	POU domain, class 3, transcription factor 4 (Brain-specific homeobox/POU domain protein 4) (Brain-4) (Brn-4).

PO3F4_HUMAN
NC score	0.253876 (rank : 324)	θ value	4.03905 (rank : 381)
Query Neighborhood Hits	431	Target Neighborhood Hits	297	Shared Neighborhood Hits	238
SwissProt Accessions	P49335, Q5H9G9, Q99410	Gene names	POU3F4, BRN4, OTF9
Domain Architecture
Description	POU domain, class 3, transcription factor 4 (Brain-specific homeobox/POU domain protein 4) (Brain-4) (Brn-4).

SIX5_MOUSE
NC score	0.246919 (rank : 325)	θ value	0.813845 (rank : 323)
Query Neighborhood Hits	431	Target Neighborhood Hits	354	Shared Neighborhood Hits	220
SwissProt Accessions	P70178	Gene names	Six5, Dmahp
Domain Architecture
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein homolog).

RHOX5_MOUSE
NC score	0.235333 (rank : 326)	θ value	θ > 10 (rank : 476)
Query Neighborhood Hits	431	Target Neighborhood Hits	69	Shared Neighborhood Hits	54
SwissProt Accessions	P52651	Gene names	Rhox5, Pem
Domain Architecture	No domain graphic available
Description	Homeobox protein Rhox5 (Reproductive homeobox on chromosome X 5) (Homeobox protein Pem) (Placenta and embryonic expression protein).

ZHX3_HUMAN
NC score	0.233256 (rank : 327)	θ value	0.000461057 (rank : 231)
Query Neighborhood Hits	431	Target Neighborhood Hits	331	Shared Neighborhood Hits	218
SwissProt Accessions	Q9H4I2, O43145	Gene names	ZHX3, KIAA0395, TIX1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

ZHX3_MOUSE
NC score	0.218240 (rank : 328)	θ value	θ > 10 (rank : 484)
Query Neighborhood Hits	431	Target Neighborhood Hits	321	Shared Neighborhood Hits	214
SwissProt Accessions	Q8C0Q2, Q80U14	Gene names	Zhx3, Kiaa0395, Tix1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

ZHX1_MOUSE
NC score	0.205645 (rank : 329)	θ value	5.27518 (rank : 402)
Query Neighborhood Hits	431	Target Neighborhood Hits	334	Shared Neighborhood Hits	213
SwissProt Accessions	P70121, Q8BQ68, Q8C6T4, Q8CJG3	Gene names	Zhx1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

ZHX1_HUMAN
NC score	0.198858 (rank : 330)	θ value	8.99809 (rank : 430)
Query Neighborhood Hits	431	Target Neighborhood Hits	307	Shared Neighborhood Hits	205
SwissProt Accessions	Q9UKY1, Q8IWD8	Gene names	ZHX1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

ZHX2_HUMAN
NC score	0.192946 (rank : 331)	θ value	5.27518 (rank : 403)
Query Neighborhood Hits	431	Target Neighborhood Hits	347	Shared Neighborhood Hits	186
SwissProt Accessions	Q9Y6X8	Gene names	ZHX2, AFR1, KIAA0854, RAF
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

HMBX1_HUMAN
NC score	0.189970 (rank : 332)	θ value	8.99809 (rank : 421)
Query Neighborhood Hits	431	Target Neighborhood Hits	118	Shared Neighborhood Hits	101
SwissProt Accessions	Q6NT76, Q3Y6P1, Q96GS5, Q9H701	Gene names	HMBOX1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

HMBX1_MOUSE
NC score	0.187027 (rank : 333)	θ value	θ > 10 (rank : 436)
Query Neighborhood Hits	431	Target Neighborhood Hits	117	Shared Neighborhood Hits	101
SwissProt Accessions	Q8BJA3, Q80WC2, Q8BWE7, Q99LV1	Gene names	Hmbox1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

ZHX2_MOUSE
NC score	0.186954 (rank : 334)	θ value	8.99809 (rank : 431)
Query Neighborhood Hits	431	Target Neighborhood Hits	435	Shared Neighborhood Hits	182
SwissProt Accessions	Q8C0C0	Gene names	Zhx2, Afr1, Raf
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

PO5FM_HUMAN
NC score	0.159958 (rank : 335)	θ value	θ > 10 (rank : 470)
Query Neighborhood Hits	431	Target Neighborhood Hits	212	Shared Neighborhood Hits	182
SwissProt Accessions	Q9BZV7	Gene names	POU5F1P1, POU5FLC20
Domain Architecture
Description	POU domain, class 5, transcription factor 1-like protein 2.

PO5FL_HUMAN
NC score	0.158178 (rank : 336)	θ value	θ > 10 (rank : 469)
Query Neighborhood Hits	431	Target Neighborhood Hits	214	Shared Neighborhood Hits	179
SwissProt Accessions	Q06416, Q9BZV9	Gene names	POU5F1P1, OTF3C, POU5FLC8
Domain Architecture
Description	POU domain, class 5, transcription factor 1-like protein 1 (Octamer- binding protein 3-like).

CUTL1_MOUSE
NC score	0.146217 (rank : 337)	θ value	θ > 10 (rank : 433)
Query Neighborhood Hits	431	Target Neighborhood Hits	1620	Shared Neighborhood Hits	234
SwissProt Accessions	P53564, O08994, P70301, Q571L6, Q91ZD2	Gene names	Cutl1, Cux, Cux1, Kiaa4047
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein Cux).

CUTL2_HUMAN
NC score	0.137506 (rank : 338)	θ value	θ > 10 (rank : 434)
Query Neighborhood Hits	431	Target Neighborhood Hits	906	Shared Neighborhood Hits	186
SwissProt Accessions	O14529	Gene names	CUTL2, KIAA0293
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

PAX2_MOUSE
NC score	0.137221 (rank : 339)	θ value	θ > 10 (rank : 454)
Query Neighborhood Hits	431	Target Neighborhood Hits	86	Shared Neighborhood Hits	53
SwissProt Accessions	P32114	Gene names	Pax2, Pax-2
Domain Architecture
Description	Paired box protein Pax-2.

CUTL2_MOUSE
NC score	0.137018 (rank : 340)	θ value	θ > 10 (rank : 435)
Query Neighborhood Hits	431	Target Neighborhood Hits	771	Shared Neighborhood Hits	182
SwissProt Accessions	P70298	Gene names	Cutl2
Domain Architecture
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

PAX2_HUMAN
NC score	0.136684 (rank : 341)	θ value	θ > 10 (rank : 453)
Query Neighborhood Hits	431	Target Neighborhood Hits	84	Shared Neighborhood Hits	54
SwissProt Accessions	Q02962, Q15105, Q15110, Q15837	Gene names	PAX2
Domain Architecture
Description	Paired box protein Pax-2.

CUTL1_HUMAN
NC score	0.133710 (rank : 342)	θ value	θ > 10 (rank : 432)
Query Neighborhood Hits	431	Target Neighborhood Hits	1574	Shared Neighborhood Hits	225
SwissProt Accessions	P39880, Q6NYH4, Q9UEV5	Gene names	CUTL1
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP).

PAX5_HUMAN
NC score	0.125080 (rank : 343)	θ value	θ > 10 (rank : 455)
Query Neighborhood Hits	431	Target Neighborhood Hits	106	Shared Neighborhood Hits	50
SwissProt Accessions	Q02548, O75933	Gene names	PAX5
Domain Architecture
Description	Paired box protein Pax-5 (B-cell-specific transcription factor) (BSAP).

PAX5_MOUSE
NC score	0.124652 (rank : 344)	θ value	θ > 10 (rank : 456)
Query Neighborhood Hits	431	Target Neighborhood Hits	106	Shared Neighborhood Hits	50
SwissProt Accessions	Q02650	Gene names	Pax5, Pax-5
Domain Architecture
Description	Paired box protein Pax-5 (B-cell-specific transcription factor) (BSAP).

PAX8_MOUSE
NC score	0.115740 (rank : 345)	θ value	θ > 10 (rank : 458)
Query Neighborhood Hits	431	Target Neighborhood Hits	62	Shared Neighborhood Hits	28
SwissProt Accessions	Q00288, P97342	Gene names	Pax8, Pax-8
Domain Architecture
Description	Paired box protein Pax-8.

PAX8_HUMAN
NC score	0.104402 (rank : 346)	θ value	θ > 10 (rank : 457)
Query Neighborhood Hits	431	Target Neighborhood Hits	56	Shared Neighborhood Hits	21
SwissProt Accessions	Q06710, Q09155, Q16337, Q16338, Q16339, Q96J49	Gene names	PAX8
Domain Architecture
Description	Paired box protein Pax-8.

PO5FN_HUMAN
NC score	0.096717 (rank : 347)	θ value	θ > 10 (rank : 471)
Query Neighborhood Hits	431	Target Neighborhood Hits	134	Shared Neighborhood Hits	113
SwissProt Accessions	Q9BZW0	Gene names	POU5FLC1
Domain Architecture
Description	POU domain, class 5, transcription factor 1-like protein 3.

PAX9_MOUSE
NC score	0.096505 (rank : 348)	θ value	θ > 10 (rank : 460)
Query Neighborhood Hits	431	Target Neighborhood Hits	67	Shared Neighborhood Hits	11
SwissProt Accessions	P47242	Gene names	Pax9, Pax-9
Domain Architecture
Description	Paired box protein Pax-9.

PAX9_HUMAN
NC score	0.095644 (rank : 349)	θ value	θ > 10 (rank : 459)
Query Neighborhood Hits	431	Target Neighborhood Hits	92	Shared Neighborhood Hits	16
SwissProt Accessions	P55771, Q99582, Q9UQR4	Gene names	PAX9
Domain Architecture
Description	Paired box protein Pax-9.

PAX1_MOUSE
NC score	0.091982 (rank : 350)	θ value	θ > 10 (rank : 452)
Query Neighborhood Hits	431	Target Neighborhood Hits	69	Shared Neighborhood Hits	15
SwissProt Accessions	P09084, Q9R2B1	Gene names	Pax1, Pax-1
Domain Architecture
Description	Paired box protein Pax-1.

PAX1_HUMAN
NC score	0.091348 (rank : 351)	θ value	θ > 10 (rank : 451)
Query Neighborhood Hits	431	Target Neighborhood Hits	72	Shared Neighborhood Hits	14
SwissProt Accessions	P15863, Q642X9, Q6NTC0, Q9Y558	Gene names	PAX1, HUP48
Domain Architecture
Description	Paired box protein Pax-1 (HUP48).

MEIS2_MOUSE
NC score	0.087080 (rank : 352)	θ value	θ > 10 (rank : 448)
Query Neighborhood Hits	431	Target Neighborhood Hits	208	Shared Neighborhood Hits	102
SwissProt Accessions	P97367, O35676, O35677, P97403, P97404	Gene names	Meis2, Mrg1, Stra10
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

MEIS2_HUMAN
NC score	0.086313 (rank : 353)	θ value	θ > 10 (rank : 447)
Query Neighborhood Hits	431	Target Neighborhood Hits	182	Shared Neighborhood Hits	101
SwissProt Accessions	O14770, Q96KI4, Q96KI5, Q9NRS1, Q9NRS2, Q9NRS3	Gene names	MEIS2, MRG1
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

TGIF2_MOUSE
NC score	0.085305 (rank : 354)	θ value	0.62314 (rank : 319)
Query Neighborhood Hits	431	Target Neighborhood Hits	127	Shared Neighborhood Hits	65
SwissProt Accessions	Q8C0Y1	Gene names	Tgif2
Domain Architecture	No domain graphic available
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

MEIS3_HUMAN
NC score	0.083296 (rank : 355)	θ value	θ > 10 (rank : 449)
Query Neighborhood Hits	431	Target Neighborhood Hits	118	Shared Neighborhood Hits	91
SwissProt Accessions	Q99687, Q6NT73, Q8TC66, Q9NPW2	Gene names	MEIS3, MRG2
Domain Architecture	No domain graphic available
Description	Homeobox protein Meis3 (Meis1-related protein 2).

ONEC2_HUMAN
NC score	0.082728 (rank : 356)	θ value	1.38821 (rank : 337)
Query Neighborhood Hits	431	Target Neighborhood Hits	115	Shared Neighborhood Hits	71
SwissProt Accessions	O95948	Gene names	ONECUT2
Domain Architecture
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

MEIS3_MOUSE
NC score	0.081695 (rank : 357)	θ value	θ > 10 (rank : 450)
Query Neighborhood Hits	431	Target Neighborhood Hits	118	Shared Neighborhood Hits	90
SwissProt Accessions	P97368, Q99L81	Gene names	Meis3, Mrg2
Domain Architecture
Description	Homeobox protein Meis3 (Meis1-related protein 2).

HNF6_MOUSE
NC score	0.081498 (rank : 358)	θ value	θ > 10 (rank : 438)
Query Neighborhood Hits	431	Target Neighborhood Hits	124	Shared Neighborhood Hits	77
SwissProt Accessions	O08755	Gene names	Onecut1, Hnf6, Hnf6a
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

MEIS1_HUMAN
NC score	0.079853 (rank : 359)	θ value	θ > 10 (rank : 445)
Query Neighborhood Hits	431	Target Neighborhood Hits	115	Shared Neighborhood Hits	92
SwissProt Accessions	O00470	Gene names	MEIS1
Domain Architecture
Description	Homeobox protein Meis1.

MEIS1_MOUSE
NC score	0.079849 (rank : 360)	θ value	θ > 10 (rank : 446)
Query Neighborhood Hits	431	Target Neighborhood Hits	115	Shared Neighborhood Hits	92
SwissProt Accessions	Q60954, Q5SVC8, Q60955, Q8CIL0	Gene names	Meis1
Domain Architecture
Description	Homeobox protein Meis1 (Myeloid ecotropic viral integration site 1).

ONEC2_MOUSE
NC score	0.079308 (rank : 361)	θ value	1.81305 (rank : 348)
Query Neighborhood Hits	431	Target Neighborhood Hits	123	Shared Neighborhood Hits	71
SwissProt Accessions	Q6XBJ3	Gene names	Onecut2, Oc2
Domain Architecture	No domain graphic available
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

TF2LX_HUMAN
NC score	0.077844 (rank : 362)	θ value	θ > 10 (rank : 479)
Query Neighborhood Hits	431	Target Neighborhood Hits	108	Shared Neighborhood Hits	71
SwissProt Accessions	Q8IUE1	Gene names	TGIF2LX, TGIFLX
Domain Architecture
Description	Homeobox protein TGIF2LX (TGFB-induced factor 2-like protein, X- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the X).

HNF6_HUMAN
NC score	0.077686 (rank : 363)	θ value	θ > 10 (rank : 437)
Query Neighborhood Hits	431	Target Neighborhood Hits	127	Shared Neighborhood Hits	75
SwissProt Accessions	Q9UBC0, Q99744, Q9UMR6	Gene names	ONECUT1, HNF6, HNF6A
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

LMO4_HUMAN
NC score	0.077402 (rank : 364)	θ value	θ > 10 (rank : 443)
Query Neighborhood Hits	431	Target Neighborhood Hits	111	Shared Neighborhood Hits	26
SwissProt Accessions	P61968, O00158, O88894	Gene names	LMO4
Domain Architecture
Description	LIM domain transcription factor LMO4 (LIM domain only protein 4) (LMO- 4) (Breast tumor autoantigen).

LMO4_MOUSE
NC score	0.077402 (rank : 365)	θ value	θ > 10 (rank : 444)
Query Neighborhood Hits	431	Target Neighborhood Hits	111	Shared Neighborhood Hits	26
SwissProt Accessions	P61969, O00158, O88894	Gene names	Lmo4
Domain Architecture
Description	LIM domain transcription factor LMO4 (LIM domain only protein 4) (LMO- 4) (Breast tumor autoantigen).

RBTN1_HUMAN
NC score	0.075571 (rank : 366)	θ value	θ > 10 (rank : 472)
Query Neighborhood Hits	431	Target Neighborhood Hits	110	Shared Neighborhood Hits	26
SwissProt Accessions	P25800, Q4VBC5	Gene names	LMO1, RBTN1, RHOM1, TTG1
Domain Architecture
Description	Rhombotin-1 (Cysteine-rich protein TTG-1) (T-cell translocation protein 1) (LIM-only protein 1).

LMO3_HUMAN
NC score	0.075550 (rank : 367)	θ value	θ > 10 (rank : 441)
Query Neighborhood Hits	431	Target Neighborhood Hits	111	Shared Neighborhood Hits	26
SwissProt Accessions	Q8TAP4, Q8N974, Q9UDD5	Gene names	LMO3, RBTN3, RHOM3
Domain Architecture
Description	LIM-only protein 3 (Neuronal-specific transcription factor DAT1) (Rhombotin-3).

LMO3_MOUSE
NC score	0.075550 (rank : 368)	θ value	θ > 10 (rank : 442)
Query Neighborhood Hits	431	Target Neighborhood Hits	111	Shared Neighborhood Hits	26
SwissProt Accessions	Q8BZL8	Gene names	Lmo3
Domain Architecture
Description	LIM-only protein 3 (Neuronal-specific transcription factor DAT1).

RBTN1_MOUSE
NC score	0.075512 (rank : 369)	θ value	θ > 10 (rank : 473)
Query Neighborhood Hits	431	Target Neighborhood Hits	109	Shared Neighborhood Hits	25
SwissProt Accessions	Q924W9	Gene names	Lmo1, Rbtn1, Rhom1, Ttg1
Domain Architecture	No domain graphic available
Description	Rhombotin-1 (Cysteine-rich protein TTG-1) (LIM-only protein 1).

RBTN2_MOUSE
NC score	0.072513 (rank : 370)	θ value	θ > 10 (rank : 475)
Query Neighborhood Hits	431	Target Neighborhood Hits	114	Shared Neighborhood Hits	26
SwissProt Accessions	P25801	Gene names	Lmo2, Rbtn-2, Rbtn2, Rhom-2
Domain Architecture
Description	Rhombotin-2 (Cysteine-rich protein TTG-2) (T-cell translocation protein 2) (LIM-only protein 2).

RBTN2_HUMAN
NC score	0.072510 (rank : 371)	θ value	θ > 10 (rank : 474)
Query Neighborhood Hits	431	Target Neighborhood Hits	114	Shared Neighborhood Hits	26
SwissProt Accessions	P25791, Q9HD58	Gene names	LMO2, RBTN2, RHOM2, TTG2
Domain Architecture
Description	Rhombotin-2 (Cysteine-rich protein TTG-2) (T-cell translocation protein 2) (LIM-only protein 2).

TF2LY_HUMAN
NC score	0.070019 (rank : 372)	θ value	θ > 10 (rank : 480)
Query Neighborhood Hits	431	Target Neighborhood Hits	90	Shared Neighborhood Hits	64
SwissProt Accessions	Q8IUE0	Gene names	TGIF2LY, TGIFLY
Domain Architecture
Description	Homeobox protein TGIF2LY (TGFB-induced factor 2-like protein, Y- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the Y).

TGIF_HUMAN
NC score	0.068683 (rank : 373)	θ value	θ > 10 (rank : 482)
Query Neighborhood Hits	431	Target Neighborhood Hits	109	Shared Neighborhood Hits	59
SwissProt Accessions	Q15583, Q6ICR0, Q8N5X9, Q9NRS0	Gene names	TGIF
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

SPRM1_HUMAN
NC score	0.068319 (rank : 374)	θ value	θ > 10 (rank : 477)
Query Neighborhood Hits	431	Target Neighborhood Hits	72	Shared Neighborhood Hits	56
SwissProt Accessions	Q8N7G0, Q8N748	Gene names	SPRM1
Domain Architecture
Description	Sperm 1 POU-domain transcription factor (SPRM-1).

TGIF2_HUMAN
NC score	0.067919 (rank : 375)	θ value	θ > 10 (rank : 481)
Query Neighborhood Hits	431	Target Neighborhood Hits	94	Shared Neighborhood Hits	57
SwissProt Accessions	Q9GZN2	Gene names	TGIF2
Domain Architecture
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

TGIF_MOUSE
NC score	0.067296 (rank : 376)	θ value	θ > 10 (rank : 483)
Query Neighborhood Hits	431	Target Neighborhood Hits	125	Shared Neighborhood Hits	59
SwissProt Accessions	P70284, Q921F9, Q99JS3	Gene names	Tgif
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

SPRM1_MOUSE
NC score	0.067009 (rank : 377)	θ value	θ > 10 (rank : 478)
Query Neighborhood Hits	431	Target Neighborhood Hits	73	Shared Neighborhood Hits	56
SwissProt Accessions	Q9DAC9	Gene names	Sprm1
Domain Architecture
Description	Sperm 1 POU-domain transcription factor (SPRM-1).

PKNX1_MOUSE
NC score	0.063979 (rank : 378)	θ value	θ > 10 (rank : 462)
Query Neighborhood Hits	431	Target Neighborhood Hits	103	Shared Neighborhood Hits	75
SwissProt Accessions	O70477	Gene names	Pknox1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1).

PKNX1_HUMAN
NC score	0.063815 (rank : 379)	θ value	θ > 10 (rank : 461)
Query Neighborhood Hits	431	Target Neighborhood Hits	101	Shared Neighborhood Hits	74
SwissProt Accessions	P55347, O00528, Q8IWT7	Gene names	PKNOX1, PREP1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox protein PREP-1).

PKNX2_MOUSE
NC score	0.062489 (rank : 380)	θ value	θ > 10 (rank : 464)
Query Neighborhood Hits	431	Target Neighborhood Hits	197	Shared Neighborhood Hits	84
SwissProt Accessions	Q8BG99, Q8R4B0	Gene names	Pknox2, Prep2
Domain Architecture	No domain graphic available
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

PKNX2_HUMAN
NC score	0.061266 (rank : 381)	θ value	θ > 10 (rank : 463)
Query Neighborhood Hits	431	Target Neighborhood Hits	133	Shared Neighborhood Hits	80
SwissProt Accessions	Q96KN3, Q63HL6, Q86XD1	Gene names	PKNOX2, PREP2
Domain Architecture
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

HOMEZ_HUMAN
NC score	0.057810 (rank : 382)	θ value	θ > 10 (rank : 439)
Query Neighborhood Hits	431	Target Neighborhood Hits	110	Shared Neighborhood Hits	47
SwissProt Accessions	Q8IX15, Q6P049, Q86XB6, Q9P2A5	Gene names	HOMEZ, KIAA1443
Domain Architecture
Description	Homeobox and leucine zipper protein Homez (Homeodomain leucine zipper- containing factor).

HNF1A_MOUSE
NC score	0.054172 (rank : 383)	θ value	6.88961 (rank : 407)
Query Neighborhood Hits	431	Target Neighborhood Hits	212	Shared Neighborhood Hits	48
SwissProt Accessions	P22361	Gene names	Tcf1, Hnf-1, Hnf-1a, Hnf1a
Domain Architecture
Description	Hepatocyte nuclear factor 1-alpha (HNF-1A) (Liver-specific transcription factor LF-B1) (LFB1).

LPP_HUMAN
NC score	0.050738 (rank : 384)	θ value	0.0193708 (rank : 263)
Query Neighborhood Hits	431	Target Neighborhood Hits	775	Shared Neighborhood Hits	79
SwissProt Accessions	Q93052, Q8NFX5	Gene names	LPP
Domain Architecture	No domain graphic available
Description	Lipoma-preferred partner (LIM domain-containing preferred translocation partner in lipoma).

OGFR_HUMAN
NC score	0.050602 (rank : 385)	θ value	1.06291 (rank : 328)
Query Neighborhood Hits	431	Target Neighborhood Hits	1582	Shared Neighborhood Hits	117
SwissProt Accessions	Q9NZT2, O96029, Q4VXW5, Q96CM2, Q9BQW1, Q9H4H0, Q9H7J5, Q9NZT3, Q9NZT4	Gene names	OGFR
Domain Architecture
Description	Opioid growth factor receptor (OGFr) (Zeta-type opioid receptor) (7-60 protein).

SC24C_HUMAN
NC score	0.044283 (rank : 386)	θ value	0.125558 (rank : 295)
Query Neighborhood Hits	431	Target Neighborhood Hits	662	Shared Neighborhood Hits	67
SwissProt Accessions	P53992, Q8WV25	Gene names	SEC24C, KIAA0079
Domain Architecture
Description	Protein transport protein Sec24C (SEC24-related protein C).

CABIN_HUMAN
NC score	0.040997 (rank : 387)	θ value	1.81305 (rank : 344)
Query Neighborhood Hits	431	Target Neighborhood Hits	490	Shared Neighborhood Hits	47
SwissProt Accessions	Q9Y6J0, Q9Y460	Gene names	CABIN1, KIAA0330
Domain Architecture
Description	Calcineurin-binding protein Cabin 1 (Calcineurin inhibitor) (CAIN).

NACAM_MOUSE
NC score	0.039250 (rank : 388)	θ value	0.0736092 (rank : 286)
Query Neighborhood Hits	431	Target Neighborhood Hits	1866	Shared Neighborhood Hits	104
SwissProt Accessions	P70670	Gene names	Naca
Domain Architecture	No domain graphic available
Description	Nascent polypeptide-associated complex subunit alpha, muscle-specific form (Alpha-NAC, muscle-specific form).

NPAS4_MOUSE
NC score	0.038313 (rank : 389)	θ value	0.0113563 (rank : 259)
Query Neighborhood Hits	431	Target Neighborhood Hits	245	Shared Neighborhood Hits	21
SwissProt Accessions	Q8BGD7, Q3V3U3	Gene names	Npas4, Nxf
Domain Architecture	No domain graphic available
Description	Neuronal PAS domain-containing protein 4 (Neuronal PAS4) (HLH-PAS transcription factor NXF) (Limbic-enhanced PAS protein) (LE-PAS).

CIC_HUMAN
NC score	0.035451 (rank : 390)	θ value	0.0736092 (rank : 283)
Query Neighborhood Hits	431	Target Neighborhood Hits	992	Shared Neighborhood Hits	72
SwissProt Accessions	Q96RK0, Q7LGI1, Q9UEG5, Q9Y6T1	Gene names	CIC, KIAA0306
Domain Architecture	No domain graphic available
Description	Protein capicua homolog.

MUC1_HUMAN
NC score	0.035347 (rank : 391)	θ value	0.00175202 (rank : 241)
Query Neighborhood Hits	431	Target Neighborhood Hits	975	Shared Neighborhood Hits	76
SwissProt Accessions	P15941, P13931, P15942, P17626, Q14128, Q14876, Q16437, Q16442, Q16615, Q9BXA4, Q9UE75, Q9UE76, Q9UQL1, Q9Y4J2	Gene names	MUC1
Domain Architecture
Description	Mucin-1 precursor (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) (H23AG) (Peanut- reactive urinary mucin) (PUM) (Breast carcinoma-associated antigen DF3) (CD227 antigen).

NFRKB_HUMAN
NC score	0.034036 (rank : 392)	θ value	0.813845 (rank : 322)
Query Neighborhood Hits	431	Target Neighborhood Hits	211	Shared Neighborhood Hits	27
SwissProt Accessions	Q6P4R8, Q12869, Q15312, Q9H048	Gene names	NFRKB
Domain Architecture	No domain graphic available
Description	Nuclear factor related to kappa-B-binding protein (DNA-binding protein R kappa-B).

RANB3_HUMAN
NC score	0.033425 (rank : 393)	θ value	0.365318 (rank : 310)
Query Neighborhood Hits	431	Target Neighborhood Hits	117	Shared Neighborhood Hits	18
SwissProt Accessions	Q9H6Z4, O60405, O75759, O75760, Q9BT47, Q9UG74	Gene names	RANBP3
Domain Architecture	No domain graphic available
Description	Ran-binding protein 3 (RanBP3).

HOMEZ_MOUSE
NC score	0.031987 (rank : 394)	θ value	2.36792 (rank : 353)
Query Neighborhood Hits	431	Target Neighborhood Hits	61	Shared Neighborhood Hits	19
SwissProt Accessions	Q80W88	Gene names	Homez, Kiaa1443
Domain Architecture
Description	Homeobox and leucine zipper protein Homez (Homeodomain leucine zipper- containing factor).

NPAS4_HUMAN
NC score	0.031936 (rank : 395)	θ value	0.47712 (rank : 312)
Query Neighborhood Hits	431	Target Neighborhood Hits	214	Shared Neighborhood Hits	17
SwissProt Accessions	Q8IUM7, Q8N8S5, Q8N9Q9	Gene names	NPAS4, NXF
Domain Architecture	No domain graphic available
Description	Neuronal PAS domain-containing protein 4 (Neuronal PAS4) (HLH-PAS transcription factor NXF).

PI5PA_HUMAN
NC score	0.031757 (rank : 396)	θ value	1.38821 (rank : 340)
Query Neighborhood Hits	431	Target Neighborhood Hits	749	Shared Neighborhood Hits	69
SwissProt Accessions	Q15735, Q32M61, Q6ZTH6, Q8N902, Q9UDT9	Gene names	PIB5PA, PIPP
Domain Architecture
Description	Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC 3.1.3.56).

SAPS1_HUMAN
NC score	0.031523 (rank : 397)	θ value	0.279714 (rank : 303)
Query Neighborhood Hits	431	Target Neighborhood Hits	704	Shared Neighborhood Hits	54
SwissProt Accessions	Q9UPN7, Q504V2, Q6NVJ6, Q9BU97	Gene names	SAPS1, KIAA1115
Domain Architecture
Description	SAPS domain family member 1.

LEUK_HUMAN
NC score	0.031189 (rank : 398)	θ value	0.365318 (rank : 308)
Query Neighborhood Hits	431	Target Neighborhood Hits	213	Shared Neighborhood Hits	23
SwissProt Accessions	P16150	Gene names	SPN, CD43
Domain Architecture	No domain graphic available
Description	Leukosialin precursor (Leukocyte sialoglycoprotein) (Sialophorin) (Galactoglycoprotein) (GALGP) (CD43 antigen).

FMN2_MOUSE
NC score	0.030651 (rank : 399)	θ value	3.0926 (rank : 362)
Query Neighborhood Hits	431	Target Neighborhood Hits	349	Shared Neighborhood Hits	36
SwissProt Accessions	Q9JL04	Gene names	Fmn2
Domain Architecture
Description	Formin-2.

BSN_MOUSE
NC score	0.030439 (rank : 400)	θ value	3.0926 (rank : 361)
Query Neighborhood Hits	431	Target Neighborhood Hits	2057	Shared Neighborhood Hits	111
SwissProt Accessions	O88737, Q6ZQB5	Gene names	Bsn, Kiaa0434
Domain Architecture	No domain graphic available
Description	Protein bassoon.

SRRM2_MOUSE
NC score	0.029929 (rank : 401)	θ value	0.813845 (rank : 324)
Query Neighborhood Hits	431	Target Neighborhood Hits	1470	Shared Neighborhood Hits	76
SwissProt Accessions	Q8BTI8, Q3TBY5, Q569P9, Q80U37, Q8K383	Gene names	Srrm2, Kiaa0324
Domain Architecture	No domain graphic available
Description	Serine/arginine repetitive matrix protein 2.

TCGAP_HUMAN
NC score	0.028966 (rank : 402)	θ value	0.125558 (rank : 297)
Query Neighborhood Hits	431	Target Neighborhood Hits	872	Shared Neighborhood Hits	60
SwissProt Accessions	O14559, O14552, O14560, Q6ZSP6, Q96CP3, Q9NT23	Gene names	SNX26, TCGAP
Domain Architecture
Description	TC10/CDC42 GTPase-activating protein (Sorting nexin-26).

SC24A_MOUSE
NC score	0.027097 (rank : 403)	θ value	1.38821 (rank : 341)
Query Neighborhood Hits	431	Target Neighborhood Hits	394	Shared Neighborhood Hits	33
SwissProt Accessions	Q3U2P1, Q3TQ05, Q3TRG7, Q8BIS0	Gene names	Sec24a
Domain Architecture	No domain graphic available
Description	Protein transport protein Sec24A (SEC24-related protein A).

NCOA6_HUMAN
NC score	0.026360 (rank : 404)	θ value	1.81305 (rank : 347)
Query Neighborhood Hits	431	Target Neighborhood Hits	1202	Shared Neighborhood Hits	80
SwissProt Accessions	Q14686, Q9NTZ9, Q9UH74, Q9UK86	Gene names	NCOA6, AIB3, KIAA0181, RAP250, TRBP
Domain Architecture	No domain graphic available
Description	Nuclear receptor coactivator 6 (Amplified in breast cancer protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (PPAR-interacting protein) (PRIP) (Nuclear receptor-activating protein, 250 kDa) (Nuclear receptor coactivator RAP250) (NRC RAP250) (Thyroid hormone receptor-binding protein).

CK060_MOUSE
NC score	0.025879 (rank : 405)	θ value	1.81305 (rank : 345)
Query Neighborhood Hits	431	Target Neighborhood Hits	17	Shared Neighborhood Hits	5
SwissProt Accessions	Q9DB07, Q91Z06, Q9JHT1	Gene names
Domain Architecture	No domain graphic available
Description	UPF0360 protein C11orf60 homolog.

TTLL5_MOUSE
NC score	0.025654 (rank : 406)	θ value	0.0563607 (rank : 282)
Query Neighborhood Hits	431	Target Neighborhood Hits	150	Shared Neighborhood Hits	11
SwissProt Accessions	Q8CHB8	Gene names	Ttll5, Kiaa0998
Domain Architecture	No domain graphic available
Description	Tubulin--tyrosine ligase-like protein 5.

HRBL_MOUSE
NC score	0.025348 (rank : 407)	θ value	0.0961366 (rank : 287)
Query Neighborhood Hits	431	Target Neighborhood Hits	269	Shared Neighborhood Hits	22
SwissProt Accessions	Q80WC7, Q8BKS5, Q99J67	Gene names	Hrbl, Rabr
Domain Architecture
Description	HIV-1 Rev-binding protein-like protein (Rev/Rex activation domain- binding protein related) (RAB-R).

T22D4_HUMAN
NC score	0.025015 (rank : 408)	θ value	0.125558 (rank : 296)
Query Neighborhood Hits	431	Target Neighborhood Hits	403	Shared Neighborhood Hits	31
SwissProt Accessions	Q9Y3Q8	Gene names	TSC22D4, TILZ2
Domain Architecture
Description	TSC22 domain family protein 4 (TSC22-related-inducible leucine zipper protein 2) (Tsc-22-like protein THG-1).

CA104_HUMAN
NC score	0.023772 (rank : 409)	θ value	1.81305 (rank : 343)
Query Neighborhood Hits	431	Target Neighborhood Hits	15	Shared Neighborhood Hits	4
SwissProt Accessions	Q66K80, Q8NA07	Gene names	C1orf104
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C1orf104.

ALEX_HUMAN
NC score	0.023607 (rank : 410)	θ value	1.38821 (rank : 332)
Query Neighborhood Hits	431	Target Neighborhood Hits	361	Shared Neighborhood Hits	27
SwissProt Accessions	P84996	Gene names	GNAS, GNAS1
Domain Architecture	No domain graphic available
Description	Protein ALEX (Alternative gene product encoded by XL-exon).

MILK1_MOUSE
NC score	0.022924 (rank : 411)	θ value	6.88961 (rank : 409)
Query Neighborhood Hits	431	Target Neighborhood Hits	788	Shared Neighborhood Hits	71
SwissProt Accessions	Q8BGT6, Q8BJ60	Gene names	Mirab13, D15Mit260, Kiaa1668
Domain Architecture
Description	Molecule interacting with Rab13 (MIRab13) (MICAL-like protein 1).

PER3_HUMAN
NC score	0.022517 (rank : 412)	θ value	0.62314 (rank : 315)
Query Neighborhood Hits	431	Target Neighborhood Hits	479	Shared Neighborhood Hits	43
SwissProt Accessions	P56645, Q5H8X4, Q969K6, Q96S77, Q96S78, Q9C0J3, Q9NSP9, Q9UGU8	Gene names	PER3
Domain Architecture
Description	Period circadian protein 3 (hPER3).

DIDO1_HUMAN
NC score	0.022189 (rank : 413)	θ value	1.38821 (rank : 334)
Query Neighborhood Hits	431	Target Neighborhood Hits	960	Shared Neighborhood Hits	48
SwissProt Accessions	Q9BTC0, O15043, Q3ZTL7, Q3ZTL8, Q4VXS1, Q4VXS2, Q96D72, Q9BQW0, Q9BW03, Q9H4G6, Q9H4G7, Q9NTU8, Q9NUM8, Q9UFB6	Gene names	DIDO1, C20orf158, DATF1, KIAA0333
Domain Architecture
Description	Death-inducer obliterator 1 (DIO-1) (Death-associated transcription factor 1) (DATF-1) (hDido1).

ATX2_MOUSE
NC score	0.022049 (rank : 414)	θ value	5.27518 (rank : 388)
Query Neighborhood Hits	431	Target Neighborhood Hits	445	Shared Neighborhood Hits	46
SwissProt Accessions	O70305, P97421	Gene names	Atxn2, Atx2, Sca2
Domain Architecture	No domain graphic available
Description	Ataxin-2 (Spinocerebellar ataxia type 2 protein homolog).

SYNP2_HUMAN
NC score	0.021889 (rank : 415)	θ value	0.279714 (rank : 304)
Query Neighborhood Hits	431	Target Neighborhood Hits	323	Shared Neighborhood Hits	21
SwissProt Accessions	Q9UMS6, Q9UK89	Gene names	SYNPO2
Domain Architecture	No domain graphic available
Description	Synaptopodin-2 (Myopodin) (Genethonin 2).

CP007_MOUSE
NC score	0.021618 (rank : 416)	θ value	1.81305 (rank : 346)
Query Neighborhood Hits	431	Target Neighborhood Hits	231	Shared Neighborhood Hits	17
SwissProt Accessions	Q8C190, Q6PFD1	Gene names
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C16orf7 homolog (5-day ovary-specific transcript 1 protein).

RP1L1_HUMAN
NC score	0.021488 (rank : 417)	θ value	0.279714 (rank : 302)
Query Neighborhood Hits	431	Target Neighborhood Hits	1072	Shared Neighborhood Hits	51
SwissProt Accessions	Q8IWN7, Q86SQ1, Q8IWN8, Q8IWN9, Q8IWP0, Q8IWP1, Q8IWP2	Gene names	RP1L1
Domain Architecture
Description	Retinitis pigmentosa 1-like 1 protein.

CK060_HUMAN
NC score	0.021074 (rank : 418)	θ value	5.27518 (rank : 390)
Query Neighborhood Hits	431	Target Neighborhood Hits	20	Shared Neighborhood Hits	5
SwissProt Accessions	Q9NQC8	Gene names	C11orf60, C11orf2
Domain Architecture	No domain graphic available
Description	UPF0360 protein C11orf60.

RGS3_MOUSE
NC score	0.020740 (rank : 419)	θ value	1.81305 (rank : 351)
Query Neighborhood Hits	431	Target Neighborhood Hits	1621	Shared Neighborhood Hits	90
SwissProt Accessions	Q9DC04, Q5SRB1, Q5SRB4, Q5SRB8, Q8CEE3, Q8VI25, Q925G9, Q9JL22, Q9JL23, Q9QXA2	Gene names	Rgs3
Domain Architecture
Description	Regulator of G-protein signaling 3 (RGS3) (C2PA).

ARNT_MOUSE
NC score	0.020515 (rank : 420)	θ value	0.0252991 (rank : 266)
Query Neighborhood Hits	431	Target Neighborhood Hits	213	Shared Neighborhood Hits	19
SwissProt Accessions	P53762, Q60661	Gene names	Arnt
Domain Architecture
Description	Aryl hydrocarbon receptor nuclear translocator (ARNT protein) (Dioxin receptor, nuclear translocator) (Hypoxia-inducible factor 1 beta) (HIF-1 beta).

CEL_HUMAN
NC score	0.019911 (rank : 421)	θ value	0.62314 (rank : 314)
Query Neighborhood Hits	431	Target Neighborhood Hits	896	Shared Neighborhood Hits	61
SwissProt Accessions	P19835, Q16398	Gene names	CEL, BAL
Domain Architecture
Description	Bile salt-activated lipase precursor (EC 3.1.1.3) (EC 3.1.1.13) (BAL) (Bile salt-stimulated lipase) (BSSL) (Carboxyl ester lipase) (Sterol esterase) (Cholesterol esterase) (Pancreatic lysophospholipase).

SYNJ1_MOUSE
NC score	0.019866 (rank : 422)	θ value	4.03905 (rank : 387)
Query Neighborhood Hits	431	Target Neighborhood Hits	516	Shared Neighborhood Hits	48
SwissProt Accessions	Q8CHC4	Gene names	Synj1, Kiaa0910
Domain Architecture
Description	Synaptojanin-1 (EC 3.1.3.36) (Synaptic inositol-1,4,5-trisphosphate 5- phosphatase 1).

RTP3_MOUSE
NC score	0.019776 (rank : 423)	θ value	3.0926 (rank : 373)
Query Neighborhood Hits	431	Target Neighborhood Hits	374	Shared Neighborhood Hits	29
SwissProt Accessions	Q5QGU6, Q8VDC2	Gene names	Rtp3, Tmem7
Domain Architecture	No domain graphic available
Description	Receptor-transporting protein 3 (Transmembrane protein 7).

TTLL5_HUMAN
NC score	0.018938 (rank : 424)	θ value	3.0926 (rank : 375)
Query Neighborhood Hits	431	Target Neighborhood Hits	141	Shared Neighborhood Hits	11
SwissProt Accessions	Q6EMB2, Q9P1V5, Q9UPZ4	Gene names	TTLL5, KIAA0998, STAMP
Domain Architecture	No domain graphic available
Description	Tubulin--tyrosine ligase-like protein 5 (SRC1 and TIF2-associated modulatory protein).

MAML1_HUMAN
NC score	0.018936 (rank : 425)	θ value	2.36792 (rank : 354)
Query Neighborhood Hits	431	Target Neighborhood Hits	228	Shared Neighborhood Hits	22
SwissProt Accessions	Q92585, Q9NZ12	Gene names	MAML1, KIAA0200
Domain Architecture	No domain graphic available
Description	Mastermind-like protein 1 (Mam-1).

K1802_HUMAN
NC score	0.018456 (rank : 426)	θ value	5.27518 (rank : 395)
Query Neighborhood Hits	431	Target Neighborhood Hits	1378	Shared Neighborhood Hits	68
SwissProt Accessions	Q96JM3, Q6P181, Q8NC88, Q9BST0	Gene names	KIAA1802, C13orf8
Domain Architecture	No domain graphic available
Description	Zinc finger protein KIAA1802.

SYN3_MOUSE
NC score	0.018064 (rank : 427)	θ value	2.36792 (rank : 359)
Query Neighborhood Hits	431	Target Neighborhood Hits	200	Shared Neighborhood Hits	29
SwissProt Accessions	Q8JZP2	Gene names	Syn3
Domain Architecture	No domain graphic available
Description	Synapsin-3 (Synapsin III).

NFH_MOUSE
NC score	0.017597 (rank : 428)	θ value	0.00228821 (rank : 246)
Query Neighborhood Hits	431	Target Neighborhood Hits	2247	Shared Neighborhood Hits	99
SwissProt Accessions	P19246, Q5SVF6, Q61959	Gene names	Nefh, Nfh
Domain Architecture
Description	Neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H).

TF3C2_MOUSE
NC score	0.016449 (rank : 429)	θ value	1.38821 (rank : 342)
Query Neighborhood Hits	431	Target Neighborhood Hits	165	Shared Neighborhood Hits	7
SwissProt Accessions	Q8BL74, Q3U7Z9, Q80XQ7, Q8BJJ4, Q8BLP3, Q8K1J1, Q9CSS0, Q9CVE6, Q9DBK6	Gene names	Gtf3c2, Kiaa0011
Domain Architecture
Description	General transcription factor 3C polypeptide 2 (Transcription factor IIIC-subunit beta) (TF3C-beta) (TFIIIC 110 kDa subunit) (TFIIIC110).

K1802_MOUSE
NC score	0.016240 (rank : 430)	θ value	0.0148317 (rank : 262)
Query Neighborhood Hits	431	Target Neighborhood Hits	1596	Shared Neighborhood Hits	76
SwissProt Accessions	Q8K327, Q3UZ85, Q6ZPI1	Gene names	Kiaa1802, D8Ertd457e
Domain Architecture	No domain graphic available
Description	Zinc finger protein KIAA1802.

DACT1_HUMAN
NC score	0.015923 (rank : 431)	θ value	5.27518 (rank : 391)
Query Neighborhood Hits	431	Target Neighborhood Hits	228	Shared Neighborhood Hits	23
SwissProt Accessions	Q9NYF0, Q86TY0	Gene names	DACT1, DPR1, HNG3
Domain Architecture	No domain graphic available
Description	Dapper homolog 1 (hDPR1) (Heptacellular carcinoma novel gene 3 protein).

TARA_HUMAN
NC score	0.015513 (rank : 432)	θ value	0.813845 (rank : 325)
Query Neighborhood Hits	431	Target Neighborhood Hits	1626	Shared Neighborhood Hits	69
SwissProt Accessions	Q9H2D6, O94797, Q2PZW8, Q2Q3Z9, Q2Q400, Q5R3M6, Q96DW1, Q9BT77, Q9BTL7, Q9BY98, Q9Y3L4	Gene names	TRIOBP, KIAA1662, TARA
Domain Architecture
Description	TRIO and F-actin-binding protein (Protein Tara) (Trio-associated repeat on actin).

CRTC1_MOUSE
NC score	0.014605 (rank : 433)	θ value	8.99809 (rank : 416)
Query Neighborhood Hits	431	Target Neighborhood Hits	230	Shared Neighborhood Hits	32
SwissProt Accessions	Q68ED7, Q6ZQ85	Gene names	Crtc1, Kiaa0616, Mect1
Domain Architecture	No domain graphic available
Description	CREB-regulated transcription coactivator 1 (Mucoepidermoid carcinoma translocated protein 1 homolog).

HIRP3_HUMAN
NC score	0.014160 (rank : 434)	θ value	4.03905 (rank : 379)
Query Neighborhood Hits	431	Target Neighborhood Hits	323	Shared Neighborhood Hits	14
SwissProt Accessions	Q9BW71, O75707, O75708	Gene names	HIRIP3
Domain Architecture	No domain graphic available
Description	HIRA-interacting protein 3.

CTND2_HUMAN
NC score	0.013899 (rank : 435)	θ value	6.88961 (rank : 406)
Query Neighborhood Hits	431	Target Neighborhood Hits	333	Shared Neighborhood Hits	42
SwissProt Accessions	Q9UQB3, O00379, O15390, O43206, O43840, Q13589, Q9UM66, Q9UPM3	Gene names	CTNND2, NPRAP
Domain Architecture
Description	Catenin delta-2 (Delta-catenin) (Neural plakophilin-related ARM-repeat protein) (NPRAP) (Neurojungin) (GT24).

TULP4_HUMAN
NC score	0.013821 (rank : 436)	θ value	2.36792 (rank : 360)
Query Neighborhood Hits	431	Target Neighborhood Hits	426	Shared Neighborhood Hits	31
SwissProt Accessions	Q9NRJ4, Q9HD22, Q9P2F0	Gene names	TULP4, KIAA1397, TUSP
Domain Architecture
Description	Tubby-like protein 4 (Tubby superfamily protein).

SON_MOUSE
NC score	0.013190 (rank : 437)	θ value	5.27518 (rank : 400)
Query Neighborhood Hits	431	Target Neighborhood Hits	957	Shared Neighborhood Hits	52
SwissProt Accessions	Q9QX47, Q9CQ12, Q9CQK6, Q9QXP5	Gene names	Son
Domain Architecture
Description	SON protein.

COE3_HUMAN
NC score	0.012843 (rank : 438)	θ value	0.813845 (rank : 320)
Query Neighborhood Hits	431	Target Neighborhood Hits	76	Shared Neighborhood Hits	7
SwissProt Accessions	Q9H4W6, Q5T6H9, Q9H4W5	Gene names	EBF3, COE3
Domain Architecture	No domain graphic available
Description	Transcription factor COE3 (Early B-cell factor 3) (EBF-3) (Olf-1/EBF- like 2) (OE-2) (O/E-2).

COE3_MOUSE
NC score	0.012522 (rank : 439)	θ value	0.813845 (rank : 321)
Query Neighborhood Hits	431	Target Neighborhood Hits	60	Shared Neighborhood Hits	7
SwissProt Accessions	O08791, O08793	Gene names	Ebf3, Coe3
Domain Architecture
Description	Transcription factor COE3 (Early B-cell factor 3) (EBF-3) (Olf-1/EBF- like 2) (OE-2) (O/E-2).

ZRAB2_HUMAN
NC score	0.012278 (rank : 440)	θ value	5.27518 (rank : 404)
Query Neighborhood Hits	431	Target Neighborhood Hits	120	Shared Neighborhood Hits	6
SwissProt Accessions	O95218, Q9UP63	Gene names	ZRANB2, ZIS, ZNF265
Domain Architecture
Description	Zinc finger Ran-binding domain-containing protein 2 Zinc finger protein 265 (Zinc finger, splicing).

LDB2_MOUSE
NC score	0.011818 (rank : 441)	θ value	3.0926 (rank : 363)
Query Neighborhood Hits	431	Target Neighborhood Hits	10	Shared Neighborhood Hits	5
SwissProt Accessions	O55203, O55205, Q6AXE6	Gene names	Ldb2, Clim1
Domain Architecture	No domain graphic available
Description	LIM domain-binding protein 2 (Carboxyl-terminal LIM domain-binding protein 1) (CLIM-1) (LIM-domain-binding factor CLIM1).

EP400_MOUSE
NC score	0.011217 (rank : 442)	θ value	4.03905 (rank : 378)
Query Neighborhood Hits	431	Target Neighborhood Hits	592	Shared Neighborhood Hits	47
SwissProt Accessions	Q8CHI8, Q80TC8, Q8BXI5, Q8BYW3, Q8C0P6, Q8CHI7, Q8VDF4, Q9DA54	Gene names	Ep400, Kiaa1498
Domain Architecture	No domain graphic available
Description	E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa SWI2/SNF2-related protein) (Domino homolog) (mDomino).

COA2_HUMAN
NC score	0.010922 (rank : 443)	θ value	1.38821 (rank : 333)
Query Neighborhood Hits	431	Target Neighborhood Hits	184	Shared Neighborhood Hits	18
SwissProt Accessions	O00763, Q16852	Gene names	ACACB, ACC2, ACCB
Domain Architecture
Description	Acetyl-CoA carboxylase 2 (EC 6.4.1.2) (ACC-beta) [Includes: Biotin carboxylase (EC 6.3.4.14)].

NFIX_HUMAN
NC score	0.010907 (rank : 444)	θ value	3.0926 (rank : 366)
Query Neighborhood Hits	431	Target Neighborhood Hits	38	Shared Neighborhood Hits	8
SwissProt Accessions	Q14938, O60413, Q12859, Q13050, Q13052, Q9UPH1, Q9Y6R8	Gene names	NFIX
Domain Architecture
Description	Nuclear factor 1 X-type (Nuclear factor 1/X) (NF1-X) (NFI-X) (NF-I/X) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein).

NFIX_MOUSE
NC score	0.010878 (rank : 445)	θ value	3.0926 (rank : 367)
Query Neighborhood Hits	431	Target Neighborhood Hits	35	Shared Neighborhood Hits	7
SwissProt Accessions	P70257, O08519, P70258, Q64192, Q99L78, Q9R1G2	Gene names	Nfix
Domain Architecture
Description	Nuclear factor 1 X-type (Nuclear factor 1/X) (NF1-X) (NFI-X) (NF-I/X) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein).

NCOR2_MOUSE
NC score	0.009636 (rank : 446)	θ value	5.27518 (rank : 397)
Query Neighborhood Hits	431	Target Neighborhood Hits	790	Shared Neighborhood Hits	40
SwissProt Accessions	Q9WU42, Q9WU43, Q9WUC1	Gene names	Ncor2, Smrt
Domain Architecture
Description	Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor- associating factor) (TRAC).

DPOE1_MOUSE
NC score	0.009239 (rank : 447)	θ value	4.03905 (rank : 377)
Query Neighborhood Hits	431	Target Neighborhood Hits	24	Shared Neighborhood Hits	3
SwissProt Accessions	Q9WVF7, Q9QX50	Gene names	Pole, Pole1
Domain Architecture
Description	DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A).

RAVR2_MOUSE
NC score	0.009135 (rank : 448)	θ value	2.36792 (rank : 358)
Query Neighborhood Hits	431	Target Neighborhood Hits	137	Shared Neighborhood Hits	6
SwissProt Accessions	Q7TPD6	Gene names	Raver2, Kiaa1579
Domain Architecture	No domain graphic available
Description	Ribonucleoprotein PTB-binding 2 (Protein raver-2).

LDB2_HUMAN
NC score	0.009006 (rank : 449)	θ value	5.27518 (rank : 396)
Query Neighborhood Hits	431	Target Neighborhood Hits	11	Shared Neighborhood Hits	3
SwissProt Accessions	O43679	Gene names	LDB2, CLIM1
Domain Architecture	No domain graphic available
Description	LIM domain-binding protein 2 (Carboxyl-terminal LIM domain-binding protein 1) (CLIM-1) (LIM domain-binding factor CLIM1).

CBL_MOUSE
NC score	0.008003 (rank : 450)	θ value	2.36792 (rank : 352)
Query Neighborhood Hits	431	Target Neighborhood Hits	426	Shared Neighborhood Hits	21
SwissProt Accessions	P22682, Q8CEA1	Gene names	Cbl
Domain Architecture
Description	E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto- oncogene).

MAGD4_HUMAN
NC score	0.007653 (rank : 451)	θ value	3.0926 (rank : 364)
Query Neighborhood Hits	431	Target Neighborhood Hits	338	Shared Neighborhood Hits	31
SwissProt Accessions	Q96JG8, Q8WXW4, Q9BQ84, Q9BYH3, Q9BYH4	Gene names	MAGED4, KIAA1859, MAGEE1
Domain Architecture
Description	Melanoma-associated antigen D4 (MAGE-D4 antigen) (MAGE-E1 antigen).

KCNH4_HUMAN
NC score	0.007632 (rank : 452)	θ value	0.365318 (rank : 307)
Query Neighborhood Hits	431	Target Neighborhood Hits	177	Shared Neighborhood Hits	11
SwissProt Accessions	Q9UQ05	Gene names	KCNH4
Domain Architecture
Description	Potassium voltage-gated channel subfamily H member 4 (Voltage-gated potassium channel subunit Kv12.3) (Ether-a-go-go-like potassium channel 1) (ELK channel 1) (ELK1) (Brain-specific eag-like channel 2) (BEC2).

EPN3_HUMAN
NC score	0.007483 (rank : 453)	θ value	5.27518 (rank : 393)
Query Neighborhood Hits	431	Target Neighborhood Hits	197	Shared Neighborhood Hits	18
SwissProt Accessions	Q9H201, Q9BVN6, Q9NWK2	Gene names	EPN3
Domain Architecture
Description	Epsin-3 (EPS-15-interacting protein 3).

CSF1_HUMAN
NC score	0.006220 (rank : 454)	θ value	8.99809 (rank : 417)
Query Neighborhood Hits	431	Target Neighborhood Hits	258	Shared Neighborhood Hits	20
SwissProt Accessions	P09603, Q13130, Q14086, Q14806, Q9UQR8	Gene names	CSF1
Domain Architecture
Description	Macrophage colony-stimulating factor 1 precursor (CSF-1) (MCSF) (M- CSF) (Lanimostim).

STAM2_MOUSE
NC score	0.006054 (rank : 455)	θ value	0.21417 (rank : 301)
Query Neighborhood Hits	431	Target Neighborhood Hits	285	Shared Neighborhood Hits	6
SwissProt Accessions	O88811, Q8C8Y4	Gene names	Stam2, Hbp
Domain Architecture	No domain graphic available
Description	Signal transducing adapter molecule 2 (STAM-2) (Hrs-binding protein).

EFC2_HUMAN
NC score	0.005294 (rank : 456)	θ value	8.99809 (rank : 418)
Query Neighborhood Hits	431	Target Neighborhood Hits	19	Shared Neighborhood Hits	3
SwissProt Accessions	P60608	Gene names
Domain Architecture	No domain graphic available
Description	HERV-F(c)2_7q36.2 provirus ancestral Env polyprotein (Envelope polyprotein) (Fc2deltaenv) [Includes: Surface protein (SU); Truncated transmembrane protein (TM)].

NUCL_HUMAN
NC score	0.004359 (rank : 457)	θ value	1.38821 (rank : 336)
Query Neighborhood Hits	431	Target Neighborhood Hits	415	Shared Neighborhood Hits	9
SwissProt Accessions	P19338, Q53SK1, Q8NB06	Gene names	NCL
Domain Architecture
Description	Nucleolin (Protein C23).

NF2L1_MOUSE
NC score	0.004063 (rank : 458)	θ value	6.88961 (rank : 410)
Query Neighborhood Hits	431	Target Neighborhood Hits	185	Shared Neighborhood Hits	8
SwissProt Accessions	Q61985, O70234	Gene names	Nfe2l1, Nrf1
Domain Architecture
Description	Nuclear factor erythroid 2-related factor 1 (NF-E2-related factor 1) (NFE2-related factor 1) (Nuclear factor, erythroid derived 2, like 1).

HS90B_HUMAN
NC score	0.003674 (rank : 459)	θ value	8.99809 (rank : 422)
Query Neighborhood Hits	431	Target Neighborhood Hits	98	Shared Neighborhood Hits	8
SwissProt Accessions	P08238, Q5T9W7, Q9NQW0	Gene names	HSP90AB1, HSP90B, HSPC2, HSPCB
Domain Architecture
Description	Heat shock protein HSP 90-beta (HSP 84) (HSP 90).

RUNX3_HUMAN
NC score	0.002745 (rank : 460)	θ value	8.99809 (rank : 427)
Query Neighborhood Hits	431	Target Neighborhood Hits	96	Shared Neighborhood Hits	9
SwissProt Accessions	Q13761, Q12969, Q13760	Gene names	RUNX3, AML2, CBFA3, PEBP2A3
Domain Architecture
Description	Runt-related transcription factor 3 (Core-binding factor, alpha 3 subunit) (CBF-alpha 3) (Acute myeloid leukemia 2 protein) (Oncogene AML-2) (Polyomavirus enhancer-binding protein 2 alpha C subunit) (PEBP2-alpha C) (PEA2-alpha C) (SL3-3 enhancer factor 1 alpha C subunit) (SL3/AKV core-binding factor alpha C subunit).

CCAR1_HUMAN
NC score	0.002669 (rank : 461)	θ value	4.03905 (rank : 376)
Query Neighborhood Hits	431	Target Neighborhood Hits	444	Shared Neighborhood Hits	11
SwissProt Accessions	Q8IX12, Q32NE3, Q5VUP6, Q6PIZ0, Q6X935, Q9H8N4, Q9NVA7, Q9NVQ0, Q9NWM6	Gene names	CCAR1, CARP1, DIS
Domain Architecture	No domain graphic available
Description	Cell division cycle and apoptosis regulator protein 1 (Cell cycle and apoptosis regulatory protein 1) (CARP-1) (Death inducer with SAP domain).

SRBS1_MOUSE
NC score	0.002281 (rank : 462)	θ value	8.99809 (rank : 428)
Query Neighborhood Hits	431	Target Neighborhood Hits	409	Shared Neighborhood Hits	17
SwissProt Accessions	Q62417, Q80TF8, Q8BZI3, Q8K3Y2, Q921F8, Q9Z0Z8, Q9Z0Z9	Gene names	Sorbs1, Kiaa1296, Sh3d5
Domain Architecture	No domain graphic available
Description	Sorbin and SH3 domain-containing protein 1 (Ponsin) (c-Cbl-associated protein) (CAP) (SH3 domain protein 5) (SH3P12).

ATRX_HUMAN
NC score	0.001958 (rank : 463)	θ value	6.88961 (rank : 405)
Query Neighborhood Hits	431	Target Neighborhood Hits	842	Shared Neighborhood Hits	24
SwissProt Accessions	P46100, P51068, Q15886, Q59FB5, Q59H31, Q5H9A2, Q5JWI4, Q7Z2J1, Q9H0Z1, Q9NTS3	Gene names	ATRX, RAD54L, XH2
Domain Architecture
Description	Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) (Znf- HX).

NUCL_MOUSE
NC score	0.001820 (rank : 464)	θ value	6.88961 (rank : 411)
Query Neighborhood Hits	431	Target Neighborhood Hits	425	Shared Neighborhood Hits	12
SwissProt Accessions	P09405, Q548M9, Q61991, Q99K50	Gene names	Ncl, Nuc
Domain Architecture
Description	Nucleolin (Protein C23).

CHD1_MOUSE
NC score	0.001257 (rank : 465)	θ value	5.27518 (rank : 389)
Query Neighborhood Hits	431	Target Neighborhood Hits	266	Shared Neighborhood Hits	11
SwissProt Accessions	P40201	Gene names	Chd1, Chd-1
Domain Architecture
Description	Chromodomain-helicase-DNA-binding protein 1 (EC 3.6.1.-) (ATP- dependent helicase CHD1) (CHD-1).

TBX18_MOUSE
NC score	0.001144 (rank : 466)	θ value	3.0926 (rank : 374)
Query Neighborhood Hits	431	Target Neighborhood Hits	58	Shared Neighborhood Hits	6
SwissProt Accessions	Q9EPZ6	Gene names	Tbx18
Domain Architecture
Description	T-box transcription factor TBX18 (T-box protein 18).

PGCA_HUMAN
NC score	0.000908 (rank : 467)	θ value	6.88961 (rank : 412)
Query Neighborhood Hits	431	Target Neighborhood Hits	821	Shared Neighborhood Hits	31
SwissProt Accessions	P16112, Q13650, Q9UCP4, Q9UCP5, Q9UDE0	Gene names	AGC1, CSPG1
Domain Architecture
Description	Aggrecan core protein precursor (Cartilage-specific proteoglycan core protein) (CSPCP) (Chondroitin sulfate proteoglycan core protein 1) [Contains: Aggrecan core protein 2].

MYO9B_HUMAN
NC score	0.000027 (rank : 468)	θ value	3.0926 (rank : 365)
Query Neighborhood Hits	431	Target Neighborhood Hits	641	Shared Neighborhood Hits	29
SwissProt Accessions	Q13459, O75314, Q9NUJ2, Q9UHN0	Gene names	MYO9B, MYR5
Domain Architecture
Description	Myosin-9B (Myosin IXb) (Unconventional myosin-9b).

LEO1_HUMAN
NC score	-0.000066 (rank : 469)	θ value	6.88961 (rank : 408)
Query Neighborhood Hits	431	Target Neighborhood Hits	958	Shared Neighborhood Hits	36
SwissProt Accessions	Q8WVC0, Q96N99	Gene names	LEO1, RDL
Domain Architecture	No domain graphic available
Description	RNA polymerase-associated protein LEO1 (Replicative senescence down- regulated leo1-like protein).

UBP6_HUMAN
NC score	-0.000241 (rank : 470)	θ value	5.27518 (rank : 401)
Query Neighborhood Hits	431	Target Neighborhood Hits	188	Shared Neighborhood Hits	10
SwissProt Accessions	P35125, Q15634, Q86WP6, Q8IWT4	Gene names	USP6, TRE2
Domain Architecture
Description	Ubiquitin carboxyl-terminal hydrolase 6 (EC 3.1.2.15) (Ubiquitin thioesterase 6) (Ubiquitin-specific-processing protease 6) (Deubiquitinating enzyme 6) (Proto-oncogene TRE-2).

PTN22_MOUSE
NC score	-0.001265 (rank : 471)	θ value	8.99809 (rank : 425)
Query Neighborhood Hits	431	Target Neighborhood Hits	179	Shared Neighborhood Hits	12
SwissProt Accessions	P29352, Q7TMP9	Gene names	Ptpn22, Ptpn8
Domain Architecture
Description	Tyrosine-protein phosphatase non-receptor type 22 (EC 3.1.3.48) (Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP).

G3BP2_MOUSE
NC score	-0.001384 (rank : 472)	θ value	8.99809 (rank : 420)
Query Neighborhood Hits	431	Target Neighborhood Hits	258	Shared Neighborhood Hits	10
SwissProt Accessions	P97379, Q9R1B8	Gene names	G3bp2
Domain Architecture
Description	Ras-GTPase-activating protein-binding protein 2 (GAP SH3-domain- binding protein 2) (G3BP-2).

POT14_HUMAN
NC score	-0.002052 (rank : 473)	θ value	1.81305 (rank : 350)
Query Neighborhood Hits	431	Target Neighborhood Hits	403	Shared Neighborhood Hits	6
SwissProt Accessions	Q6S5H5, Q6S5H6, Q6S8J2	Gene names	POTE14
Domain Architecture	No domain graphic available
Description	Prostate, ovary, testis-expressed protein on chromosome 14.

FGD6_MOUSE
NC score	-0.002176 (rank : 474)	θ value	8.99809 (rank : 419)
Query Neighborhood Hits	431	Target Neighborhood Hits	282	Shared Neighborhood Hits	12
SwissProt Accessions	Q69ZL1, Q8C8W5, Q8K3B0, Q9D3Y7	Gene names	Fgd6, Kiaa1362
Domain Architecture	No domain graphic available
Description	FYVE, RhoGEF and PH domain-containing protein 6.

TACC2_HUMAN
NC score	-0.002188 (rank : 475)	θ value	8.99809 (rank : 429)
Query Neighborhood Hits	431	Target Neighborhood Hits	856	Shared Neighborhood Hits	33
SwissProt Accessions	O95359, Q9NZ41, Q9NZR5	Gene names	TACC2
Domain Architecture
Description	Transforming acidic coiled-coil-containing protein 2 (Anti Zuai-1) (AZU-1).

HTSF1_HUMAN
NC score	-0.002489 (rank : 476)	θ value	8.99809 (rank : 423)
Query Neighborhood Hits	431	Target Neighborhood Hits	408	Shared Neighborhood Hits	9
SwissProt Accessions	O43719, Q59G06, Q99730	Gene names	HTATSF1
Domain Architecture	No domain graphic available
Description	HIV Tat-specific factor 1 (Tat-SF1).

REM1_HUMAN
NC score	-0.004471 (rank : 477)	θ value	3.0926 (rank : 372)
Query Neighborhood Hits	431	Target Neighborhood Hits	247	Shared Neighborhood Hits	3
SwissProt Accessions	O75628, Q9NP57	Gene names	REM1, GES, REM
Domain Architecture
Description	GTP-binding protein REM 1 (Rad and Gem-like GTP-binding protein 1) (GTPase-regulating endothelial cell sprouting).

PCDA7_HUMAN
NC score	-0.006221 (rank : 478)	θ value	8.99809 (rank : 424)
Query Neighborhood Hits	431	Target Neighborhood Hits	221	Shared Neighborhood Hits	5
SwissProt Accessions	Q9UN72, O75282	Gene names	PCDHA7
Domain Architecture
Description	Protocadherin alpha 7 precursor (PCDH-alpha7).

ZN438_HUMAN
NC score	-0.006582 (rank : 479)	θ value	1.06291 (rank : 331)
Query Neighborhood Hits	431	Target Neighborhood Hits	906	Shared Neighborhood Hits	26
SwissProt Accessions	Q7Z4V0, Q5T426, Q658Q4, Q6ZN65	Gene names	ZNF438
Domain Architecture	No domain graphic available
Description	Zinc finger protein 438.

EGR4_HUMAN
NC score	-0.007985 (rank : 480)	θ value	0.21417 (rank : 300)
Query Neighborhood Hits	431	Target Neighborhood Hits	939	Shared Neighborhood Hits	28
SwissProt Accessions	Q05215	Gene names	EGR4
Domain Architecture
Description	Early growth response protein 4 (EGR-4) (AT133).

SALL1_MOUSE
NC score	-0.011428 (rank : 481)	θ value	6.88961 (rank : 415)
Query Neighborhood Hits	431	Target Neighborhood Hits	826	Shared Neighborhood Hits	24
SwissProt Accessions	Q9ER74, Q920R5	Gene names	Sall1, Sal3
Domain Architecture
Description	Sal-like protein 1 (Zinc finger protein Spalt-3) (Sal-3) (MSal-3).

EPHB6_HUMAN
NC score	-0.011457 (rank : 482)	θ value	5.27518 (rank : 392)
Query Neighborhood Hits	431	Target Neighborhood Hits	912	Shared Neighborhood Hits	12
SwissProt Accessions	O15197	Gene names	EPHB6
Domain Architecture
Description	Ephrin type-B receptor 6 precursor (Tyrosine-protein kinase-defective receptor EPH-6) (HEP).

MARK2_MOUSE
NC score	-0.015645 (rank : 483)	θ value	4.03905 (rank : 380)
Query Neighborhood Hits	431	Target Neighborhood Hits	1018	Shared Neighborhood Hits	19
SwissProt Accessions	Q05512, Q6PDR4, Q8BR95	Gene names	Mark2, Emk
Domain Architecture
Description	Serine/threonine-protein kinase MARK2 (EC 2.7.11.1) (MAP/microtubule affinity-regulating kinase 2) (ELKL Motif Kinase) (EMK1).

ROCK2_HUMAN
NC score	-0.021130 (rank : 484)	θ value	8.99809 (rank : 426)
Query Neighborhood Hits	431	Target Neighborhood Hits	2073	Shared Neighborhood Hits	18
SwissProt Accessions	O75116, Q9UQN5	Gene names	ROCK2, KIAA0619
Domain Architecture
Description	Rho-associated protein kinase 2 (EC 2.7.11.1) (Rho-associated, coiled- coil-containing protein kinase 2) (p164 ROCK-2) (Rho kinase 2).