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Network neighborhood for query Sequence : TGIF2_MOUSE

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TGIF2_MOUSE
SwissProt Accessions	Q8C0Y1	Gene names	Tgif2
Domain Architecture	No domain graphic available
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

TGIF2_MOUSE
θ value	8.09639e-134 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	127	Target Neighborhood Hits	127	Shared Neighborhood Hits	127
SwissProt Accessions	Q8C0Y1	Gene names	Tgif2
Domain Architecture	No domain graphic available
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

TGIF2_HUMAN
θ value	8.11517e-126 (rank : 2)	NC score	0.991407 (rank : 2)
Query Neighborhood Hits	127	Target Neighborhood Hits	94	Shared Neighborhood Hits	86
SwissProt Accessions	Q9GZN2	Gene names	TGIF2
Domain Architecture
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

TGIF_MOUSE
θ value	2.25659e-51 (rank : 3)	NC score	0.949682 (rank : 3)
Query Neighborhood Hits	127	Target Neighborhood Hits	125	Shared Neighborhood Hits	69
SwissProt Accessions	P70284, Q921F9, Q99JS3	Gene names	Tgif
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

TGIF_HUMAN
θ value	4.25575e-50 (rank : 4)	NC score	0.944705 (rank : 4)
Query Neighborhood Hits	127	Target Neighborhood Hits	109	Shared Neighborhood Hits	67
SwissProt Accessions	Q15583, Q6ICR0, Q8N5X9, Q9NRS0	Gene names	TGIF
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

TF2LX_HUMAN
θ value	2.19075e-38 (rank : 5)	NC score	0.926818 (rank : 5)
Query Neighborhood Hits	127	Target Neighborhood Hits	108	Shared Neighborhood Hits	69
SwissProt Accessions	Q8IUE1	Gene names	TGIF2LX, TGIFLX
Domain Architecture
Description	Homeobox protein TGIF2LX (TGFB-induced factor 2-like protein, X- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the X).

TF2LY_HUMAN
θ value	2.77775e-25 (rank : 6)	NC score	0.913959 (rank : 6)
Query Neighborhood Hits	127	Target Neighborhood Hits	90	Shared Neighborhood Hits	67
SwissProt Accessions	Q8IUE0	Gene names	TGIF2LY, TGIFLY
Domain Architecture
Description	Homeobox protein TGIF2LY (TGFB-induced factor 2-like protein, Y- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the Y).

PKNX2_HUMAN
θ value	4.44505e-15 (rank : 7)	NC score	0.764913 (rank : 7)
Query Neighborhood Hits	127	Target Neighborhood Hits	133	Shared Neighborhood Hits	66
SwissProt Accessions	Q96KN3, Q63HL6, Q86XD1	Gene names	PKNOX2, PREP2
Domain Architecture
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

PKNX2_MOUSE
θ value	4.44505e-15 (rank : 8)	NC score	0.758194 (rank : 10)
Query Neighborhood Hits	127	Target Neighborhood Hits	197	Shared Neighborhood Hits	69
SwissProt Accessions	Q8BG99, Q8R4B0	Gene names	Pknox2, Prep2
Domain Architecture	No domain graphic available
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

MEIS3_HUMAN
θ value	1.68911e-14 (rank : 9)	NC score	0.748908 (rank : 12)
Query Neighborhood Hits	127	Target Neighborhood Hits	118	Shared Neighborhood Hits	57
SwissProt Accessions	Q99687, Q6NT73, Q8TC66, Q9NPW2	Gene names	MEIS3, MRG2
Domain Architecture	No domain graphic available
Description	Homeobox protein Meis3 (Meis1-related protein 2).

MEIS3_MOUSE
θ value	1.68911e-14 (rank : 10)	NC score	0.751491 (rank : 11)
Query Neighborhood Hits	127	Target Neighborhood Hits	118	Shared Neighborhood Hits	57
SwissProt Accessions	P97368, Q99L81	Gene names	Meis3, Mrg2
Domain Architecture
Description	Homeobox protein Meis3 (Meis1-related protein 2).

PKNX1_MOUSE
θ value	3.76295e-14 (rank : 11)	NC score	0.760419 (rank : 8)
Query Neighborhood Hits	127	Target Neighborhood Hits	103	Shared Neighborhood Hits	62
SwissProt Accessions	O70477	Gene names	Pknox1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1).

PKNX1_HUMAN
θ value	6.41864e-14 (rank : 12)	NC score	0.758412 (rank : 9)
Query Neighborhood Hits	127	Target Neighborhood Hits	101	Shared Neighborhood Hits	62
SwissProt Accessions	P55347, O00528, Q8IWT7	Gene names	PKNOX1, PREP1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox protein PREP-1).

MEIS1_HUMAN
θ value	7.09661e-13 (rank : 13)	NC score	0.731539 (rank : 14)
Query Neighborhood Hits	127	Target Neighborhood Hits	115	Shared Neighborhood Hits	59
SwissProt Accessions	O00470	Gene names	MEIS1
Domain Architecture
Description	Homeobox protein Meis1.

MEIS1_MOUSE
θ value	7.09661e-13 (rank : 14)	NC score	0.731549 (rank : 13)
Query Neighborhood Hits	127	Target Neighborhood Hits	115	Shared Neighborhood Hits	59
SwissProt Accessions	Q60954, Q5SVC8, Q60955, Q8CIL0	Gene names	Meis1
Domain Architecture
Description	Homeobox protein Meis1 (Myeloid ecotropic viral integration site 1).

MEIS2_HUMAN
θ value	1.2105e-12 (rank : 15)	NC score	0.716705 (rank : 15)
Query Neighborhood Hits	127	Target Neighborhood Hits	182	Shared Neighborhood Hits	59
SwissProt Accessions	O14770, Q96KI4, Q96KI5, Q9NRS1, Q9NRS2, Q9NRS3	Gene names	MEIS2, MRG1
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

MEIS2_MOUSE
θ value	1.2105e-12 (rank : 16)	NC score	0.714101 (rank : 16)
Query Neighborhood Hits	127	Target Neighborhood Hits	208	Shared Neighborhood Hits	59
SwissProt Accessions	P97367, O35676, O35677, P97403, P97404	Gene names	Meis2, Mrg1, Stra10
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

IRX6_MOUSE
θ value	1.38499e-08 (rank : 17)	NC score	0.617838 (rank : 17)
Query Neighborhood Hits	127	Target Neighborhood Hits	256	Shared Neighborhood Hits	73
SwissProt Accessions	Q9ER75	Gene names	Irx6, Irxb3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

IRX6_HUMAN
θ value	5.26297e-08 (rank : 18)	NC score	0.617011 (rank : 18)
Query Neighborhood Hits	127	Target Neighborhood Hits	262	Shared Neighborhood Hits	73
SwissProt Accessions	P78412, Q7Z2K0	Gene names	IRX6, IRX7, IRXB3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

PBX4_MOUSE
θ value	6.87365e-08 (rank : 19)	NC score	0.558961 (rank : 29)
Query Neighborhood Hits	127	Target Neighborhood Hits	324	Shared Neighborhood Hits	79
SwissProt Accessions	Q99NE9, Q8CFL2, Q99NE8	Gene names	Pbx4
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4).

IRX4_HUMAN
θ value	1.17247e-07 (rank : 20)	NC score	0.614797 (rank : 19)
Query Neighborhood Hits	127	Target Neighborhood Hits	276	Shared Neighborhood Hits	73
SwissProt Accessions	P78413, Q9UHR2	Gene names	IRX4, IRXA3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

IRX4_MOUSE
θ value	1.17247e-07 (rank : 21)	NC score	0.610646 (rank : 24)
Query Neighborhood Hits	127	Target Neighborhood Hits	286	Shared Neighborhood Hits	73
SwissProt Accessions	Q9QY61	Gene names	Irx4, Irxa3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

IRX1_HUMAN
θ value	1.99992e-07 (rank : 22)	NC score	0.614218 (rank : 21)
Query Neighborhood Hits	127	Target Neighborhood Hits	285	Shared Neighborhood Hits	69
SwissProt Accessions	P78414, Q7Z2F8, Q8N312	Gene names	IRX1, IRXA1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX3_HUMAN
θ value	1.99992e-07 (rank : 23)	NC score	0.611250 (rank : 23)
Query Neighborhood Hits	127	Target Neighborhood Hits	342	Shared Neighborhood Hits	73
SwissProt Accessions	P78415, Q7Z4A4, Q7Z4A5, Q8IVC6	Gene names	IRX3, IRXB1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX3_MOUSE
θ value	1.99992e-07 (rank : 24)	NC score	0.611829 (rank : 22)
Query Neighborhood Hits	127	Target Neighborhood Hits	303	Shared Neighborhood Hits	71
SwissProt Accessions	P81067	Gene names	Irx3, Irxb1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX2_MOUSE
θ value	2.61198e-07 (rank : 25)	NC score	0.594747 (rank : 25)
Query Neighborhood Hits	127	Target Neighborhood Hits	264	Shared Neighborhood Hits	68
SwissProt Accessions	P81066, O55121, Q9ERN1	Gene names	Irx2, Irxa2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

IRX1_MOUSE
θ value	3.41135e-07 (rank : 26)	NC score	0.614225 (rank : 20)
Query Neighborhood Hits	127	Target Neighborhood Hits	269	Shared Neighborhood Hits	70
SwissProt Accessions	P81068, O55120, Q9JLL6	Gene names	Irx1, Irxa1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

PBX3_HUMAN
θ value	7.59969e-07 (rank : 27)	NC score	0.533123 (rank : 35)
Query Neighborhood Hits	127	Target Neighborhood Hits	306	Shared Neighborhood Hits	74
SwissProt Accessions	P40426, Q96PF9, Q96PG0	Gene names	PBX3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PBX3_MOUSE
θ value	7.59969e-07 (rank : 28)	NC score	0.533154 (rank : 34)
Query Neighborhood Hits	127	Target Neighborhood Hits	306	Shared Neighborhood Hits	74
SwissProt Accessions	O35317, Q925W2	Gene names	Pbx3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

IRX2_HUMAN
θ value	9.92553e-07 (rank : 29)	NC score	0.579317 (rank : 28)
Query Neighborhood Hits	127	Target Neighborhood Hits	358	Shared Neighborhood Hits	71
SwissProt Accessions	Q9BZI1, Q7Z2I7	Gene names	IRX2, IRXA2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

PBX1_HUMAN
θ value	1.29631e-06 (rank : 30)	NC score	0.534027 (rank : 32)
Query Neighborhood Hits	127	Target Neighborhood Hits	317	Shared Neighborhood Hits	78
SwissProt Accessions	P40424	Gene names	PBX1, PRL
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1) (Homeobox protein PRL).

PBX1_MOUSE
θ value	1.29631e-06 (rank : 31)	NC score	0.534027 (rank : 33)
Query Neighborhood Hits	127	Target Neighborhood Hits	317	Shared Neighborhood Hits	78
SwissProt Accessions	P41778	Gene names	Pbx1, Pbx-1
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1).

PBX2_HUMAN
θ value	1.29631e-06 (rank : 32)	NC score	0.534972 (rank : 31)
Query Neighborhood Hits	127	Target Neighborhood Hits	350	Shared Neighborhood Hits	78
SwissProt Accessions	P40425	Gene names	PBX2, G17
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2) (Protein G17).

PBX2_MOUSE
θ value	1.29631e-06 (rank : 33)	NC score	0.535452 (rank : 30)
Query Neighborhood Hits	127	Target Neighborhood Hits	341	Shared Neighborhood Hits	78
SwissProt Accessions	O35984	Gene names	Pbx2
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2).

IRX5_HUMAN
θ value	1.69304e-06 (rank : 34)	NC score	0.587234 (rank : 26)
Query Neighborhood Hits	127	Target Neighborhood Hits	362	Shared Neighborhood Hits	75
SwissProt Accessions	P78411, P78416, Q7Z2E1	Gene names	IRX5, IRX2A, IRXB2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2) (IRX-2A).

IRX5_MOUSE
θ value	1.69304e-06 (rank : 35)	NC score	0.584480 (rank : 27)
Query Neighborhood Hits	127	Target Neighborhood Hits	324	Shared Neighborhood Hits	75
SwissProt Accessions	Q9JKQ4, Q80WV4, Q9JLL5	Gene names	Irx5, Irxb2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2).

SIX2_MOUSE
θ value	5.44631e-05 (rank : 36)	NC score	0.430833 (rank : 36)
Query Neighborhood Hits	127	Target Neighborhood Hits	376	Shared Neighborhood Hits	87
SwissProt Accessions	Q62232, P70179	Gene names	Six2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

SIX2_HUMAN
θ value	0.000121331 (rank : 37)	NC score	0.427898 (rank : 37)
Query Neighborhood Hits	127	Target Neighborhood Hits	345	Shared Neighborhood Hits	85
SwissProt Accessions	Q9NPC8, Q9BXH7	Gene names	SIX2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

SIX1_HUMAN
θ value	0.000786445 (rank : 38)	NC score	0.418078 (rank : 39)
Query Neighborhood Hits	127	Target Neighborhood Hits	343	Shared Neighborhood Hits	81
SwissProt Accessions	Q15475, Q96H64	Gene names	SIX1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX1_MOUSE
θ value	0.000786445 (rank : 39)	NC score	0.418263 (rank : 38)
Query Neighborhood Hits	127	Target Neighborhood Hits	341	Shared Neighborhood Hits	81
SwissProt Accessions	Q62231, Q8CIL7	Gene names	Six1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

NKX24_MOUSE
θ value	0.00390308 (rank : 40)	NC score	0.074757 (rank : 96)
Query Neighborhood Hits	127	Target Neighborhood Hits	356	Shared Neighborhood Hits	56
SwissProt Accessions	Q9EQM3, Q9EQM4	Gene names	Nkx2-4, Nkx2d
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

SIX5_HUMAN
θ value	0.00509761 (rank : 41)	NC score	0.366866 (rank : 43)
Query Neighborhood Hits	127	Target Neighborhood Hits	386	Shared Neighborhood Hits	70
SwissProt Accessions	Q8N196	Gene names	SIX5, DMAHP
Domain Architecture	No domain graphic available
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein).

NKX24_HUMAN
θ value	0.00665767 (rank : 42)	NC score	0.085380 (rank : 70)
Query Neighborhood Hits	127	Target Neighborhood Hits	366	Shared Neighborhood Hits	58
SwissProt Accessions	Q9H2Z4	Gene names	NKX2-4, NKX2D
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

SIX5_MOUSE
θ value	0.00665767 (rank : 43)	NC score	0.359262 (rank : 47)
Query Neighborhood Hits	127	Target Neighborhood Hits	354	Shared Neighborhood Hits	69
SwissProt Accessions	P70178	Gene names	Six5, Dmahp
Domain Architecture
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein homolog).

SIX4_HUMAN
θ value	0.00869519 (rank : 44)	NC score	0.367820 (rank : 41)
Query Neighborhood Hits	127	Target Neighborhood Hits	342	Shared Neighborhood Hits	73
SwissProt Accessions	Q9UIU6	Gene names	SIX4
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4).

SIX4_MOUSE
θ value	0.00869519 (rank : 45)	NC score	0.368426 (rank : 40)
Query Neighborhood Hits	127	Target Neighborhood Hits	341	Shared Neighborhood Hits	73
SwissProt Accessions	Q61321, Q61322, Q61323	Gene names	Six4, Arec3
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4) (Skeletal muscle-specific ARE-binding protein AREC3).

CUTL2_HUMAN
θ value	0.0330416 (rank : 46)	NC score	0.162708 (rank : 53)
Query Neighborhood Hits	127	Target Neighborhood Hits	906	Shared Neighborhood Hits	63
SwissProt Accessions	O14529	Gene names	CUTL2, KIAA0293
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

CUTL2_MOUSE
θ value	0.0431538 (rank : 47)	NC score	0.175928 (rank : 52)
Query Neighborhood Hits	127	Target Neighborhood Hits	771	Shared Neighborhood Hits	57
SwissProt Accessions	P70298	Gene names	Cutl2
Domain Architecture
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

SIX6_MOUSE
θ value	0.0431538 (rank : 48)	NC score	0.367290 (rank : 42)
Query Neighborhood Hits	127	Target Neighborhood Hits	267	Shared Neighborhood Hits	72
SwissProt Accessions	Q9QZ28, O88423	Gene names	Six6, Optx2, Six9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Six9 protein).

HNF6_HUMAN
θ value	0.0736092 (rank : 49)	NC score	0.198102 (rank : 48)
Query Neighborhood Hits	127	Target Neighborhood Hits	127	Shared Neighborhood Hits	42
SwissProt Accessions	Q9UBC0, Q99744, Q9UMR6	Gene names	ONECUT1, HNF6, HNF6A
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

HNF6_MOUSE
θ value	0.0736092 (rank : 50)	NC score	0.194953 (rank : 50)
Query Neighborhood Hits	127	Target Neighborhood Hits	124	Shared Neighborhood Hits	42
SwissProt Accessions	O08755	Gene names	Onecut1, Hnf6, Hnf6a
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

WNK4_MOUSE
θ value	0.0736092 (rank : 51)	NC score	0.002984 (rank : 305)
Query Neighborhood Hits	127	Target Neighborhood Hits	961	Shared Neighborhood Hits	6
SwissProt Accessions	Q80UE6, Q4VAC1, Q80XB5, Q80XN2, Q8R0N0, Q8R340	Gene names	Wnk4, Prkwnk4
Domain Architecture
Description	Serine/threonine-protein kinase WNK4 (EC 2.7.11.1) (Protein kinase with no lysine 4) (Protein kinase, lysine-deficient 4).

SIX6_HUMAN
θ value	0.163984 (rank : 52)	NC score	0.365354 (rank : 44)
Query Neighborhood Hits	127	Target Neighborhood Hits	269	Shared Neighborhood Hits	71
SwissProt Accessions	O95475, Q9P1X8	Gene names	SIX6, OPTX2, SIX9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Homeodomain protein OPTX2).

HXD3_MOUSE
θ value	0.21417 (rank : 53)	NC score	0.069089 (rank : 120)
Query Neighborhood Hits	127	Target Neighborhood Hits	435	Shared Neighborhood Hits	58
SwissProt Accessions	P09027, Q3UUD3	Gene names	Hoxd3, Hox-4.1, Hoxd-3
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4.1) (Homeobox protein MH-19).

ONEC2_HUMAN
θ value	0.279714 (rank : 54)	NC score	0.196247 (rank : 49)
Query Neighborhood Hits	127	Target Neighborhood Hits	115	Shared Neighborhood Hits	41
SwissProt Accessions	O95948	Gene names	ONECUT2
Domain Architecture
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

ONEC2_MOUSE
θ value	0.279714 (rank : 55)	NC score	0.194253 (rank : 51)
Query Neighborhood Hits	127	Target Neighborhood Hits	123	Shared Neighborhood Hits	40
SwissProt Accessions	Q6XBJ3	Gene names	Onecut2, Oc2
Domain Architecture	No domain graphic available
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

RXRB_HUMAN
θ value	0.279714 (rank : 56)	NC score	0.007754 (rank : 298)
Query Neighborhood Hits	127	Target Neighborhood Hits	280	Shared Neighborhood Hits	6
SwissProt Accessions	P28702, P28703	Gene names	RXRB, NR2B2
Domain Architecture
Description	Retinoic acid receptor RXR-beta (Retinoid X receptor beta).

RX_MOUSE
θ value	0.279714 (rank : 57)	NC score	0.060964 (rank : 176)
Query Neighborhood Hits	127	Target Neighborhood Hits	429	Shared Neighborhood Hits	60
SwissProt Accessions	O35602, O08748	Gene names	Rax, Rx
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

SIX3_HUMAN
θ value	0.279714 (rank : 58)	NC score	0.361700 (rank : 45)
Query Neighborhood Hits	127	Target Neighborhood Hits	285	Shared Neighborhood Hits	71
SwissProt Accessions	O95343	Gene names	SIX3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SIX3_MOUSE
θ value	0.279714 (rank : 59)	NC score	0.361650 (rank : 46)
Query Neighborhood Hits	127	Target Neighborhood Hits	289	Shared Neighborhood Hits	71
SwissProt Accessions	Q62233, P70176, P70177	Gene names	Six3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

HXD10_HUMAN
θ value	0.365318 (rank : 60)	NC score	0.096664 (rank : 59)
Query Neighborhood Hits	127	Target Neighborhood Hits	392	Shared Neighborhood Hits	64
SwissProt Accessions	P28358	Gene names	HOXD10, HOX4D
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4D) (Hox-4E).

HXD10_MOUSE
θ value	0.365318 (rank : 61)	NC score	0.097372 (rank : 56)
Query Neighborhood Hits	127	Target Neighborhood Hits	392	Shared Neighborhood Hits	64
SwissProt Accessions	P28359, Q91WU9	Gene names	Hoxd10, Hox-4.5, Hoxd-10
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4.5) (Hox-5.3).

NKX61_MOUSE
θ value	0.365318 (rank : 62)	NC score	0.089678 (rank : 67)
Query Neighborhood Hits	127	Target Neighborhood Hits	439	Shared Neighborhood Hits	66
SwissProt Accessions	Q99MA9, Q9ERQ7	Gene names	Nkx6-1, Nkx6.1, Nkx6a
Domain Architecture
Description	Homeobox protein Nkx-6.1.

ATBF1_HUMAN
θ value	0.47712 (rank : 63)	NC score	0.066529 (rank : 138)
Query Neighborhood Hits	127	Target Neighborhood Hits	1547	Shared Neighborhood Hits	83
SwissProt Accessions	Q15911, O15101, Q13719	Gene names	ATBF1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

ATBF1_MOUSE
θ value	0.47712 (rank : 64)	NC score	0.066393 (rank : 139)
Query Neighborhood Hits	127	Target Neighborhood Hits	1841	Shared Neighborhood Hits	85
SwissProt Accessions	Q61329	Gene names	Atbf1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

NKX61_HUMAN
θ value	0.62314 (rank : 65)	NC score	0.085305 (rank : 71)
Query Neighborhood Hits	127	Target Neighborhood Hits	431	Shared Neighborhood Hits	65
SwissProt Accessions	P78426	Gene names	NKX6-1, NKX6A
Domain Architecture
Description	Homeobox protein Nkx-6.1.

BCL3_HUMAN
θ value	1.06291 (rank : 66)	NC score	0.008092 (rank : 297)
Query Neighborhood Hits	127	Target Neighborhood Hits	324	Shared Neighborhood Hits	5
SwissProt Accessions	P20749	Gene names	BCL3
Domain Architecture
Description	B-cell lymphoma 3-encoded protein (Protein Bcl-3).

CLPT1_HUMAN
θ value	1.06291 (rank : 67)	NC score	0.027049 (rank : 272)
Query Neighborhood Hits	127	Target Neighborhood Hits	15	Shared Neighborhood Hits	2
SwissProt Accessions	O96005, Q53ET6, Q9BSS5	Gene names	CLPTM1
Domain Architecture	No domain graphic available
Description	Cleft lip and palate transmembrane protein 1.

RX_HUMAN
θ value	1.06291 (rank : 68)	NC score	0.056706 (rank : 211)
Query Neighborhood Hits	127	Target Neighborhood Hits	423	Shared Neighborhood Hits	61
SwissProt Accessions	Q9Y2V3	Gene names	RAX, RX
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

S4A7_HUMAN
θ value	1.06291 (rank : 69)	NC score	0.011920 (rank : 288)
Query Neighborhood Hits	127	Target Neighborhood Hits	55	Shared Neighborhood Hits	3
SwissProt Accessions	Q9Y6M7, O60350, Q6AHZ9, Q9HC88, Q9UIB9	Gene names	SLC4A7, BT, NBC2, NBC2B, NBC3, SBC2, SLC4A6
Domain Architecture	No domain graphic available
Description	Sodium bicarbonate cotransporter 3 (Sodium bicarbonate cotransporter 2) (Sodium bicarbonate cotransporter 2b) (Bicarbonate transporter) (Solute carrier family 4 member 7).

SF01_HUMAN
θ value	1.06291 (rank : 70)	NC score	0.028604 (rank : 270)
Query Neighborhood Hits	127	Target Neighborhood Hits	287	Shared Neighborhood Hits	8
SwissProt Accessions	Q15637, Q14818, Q14819, Q15913, Q8IY00, Q92744, Q92745, Q969H7, Q9BW01, Q9UEI0	Gene names	SF1, ZFM1, ZNF162
Domain Architecture
Description	Splicing factor 1 (Zinc finger protein 162) (Transcription factor ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian branch point-binding protein mBBP) (BBP).

TNC6B_HUMAN
θ value	1.06291 (rank : 71)	NC score	0.029210 (rank : 269)
Query Neighborhood Hits	127	Target Neighborhood Hits	256	Shared Neighborhood Hits	7
SwissProt Accessions	Q9UPQ9, Q5TH52, Q8TBX2	Gene names	TNRC6B, KIAA1093
Domain Architecture
Description	Trinucleotide repeat-containing 6B protein.

CUTL1_HUMAN
θ value	1.38821 (rank : 72)	NC score	0.074188 (rank : 99)
Query Neighborhood Hits	127	Target Neighborhood Hits	1574	Shared Neighborhood Hits	63
SwissProt Accessions	P39880, Q6NYH4, Q9UEV5	Gene names	CUTL1
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP).

ZHX2_HUMAN
θ value	1.38821 (rank : 73)	NC score	0.097247 (rank : 57)
Query Neighborhood Hits	127	Target Neighborhood Hits	347	Shared Neighborhood Hits	44
SwissProt Accessions	Q9Y6X8	Gene names	ZHX2, AFR1, KIAA0854, RAF
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

HXC10_HUMAN
θ value	1.81305 (rank : 74)	NC score	0.091727 (rank : 61)
Query Neighborhood Hits	127	Target Neighborhood Hits	417	Shared Neighborhood Hits	66
SwissProt Accessions	Q9NYD6, O15219, O15220, Q9BVD5	Gene names	HOXC10
Domain Architecture
Description	Homeobox protein Hox-C10.

HXC10_MOUSE
θ value	1.81305 (rank : 75)	NC score	0.093104 (rank : 60)
Query Neighborhood Hits	127	Target Neighborhood Hits	417	Shared Neighborhood Hits	66
SwissProt Accessions	P31257, P31312, Q7TMT7	Gene names	Hoxc10, Hox-3.6, Hoxc-10
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C10 (Hox-3.6).

HXC4_HUMAN
θ value	1.81305 (rank : 76)	NC score	0.059904 (rank : 184)
Query Neighborhood Hits	127	Target Neighborhood Hits	361	Shared Neighborhood Hits	55
SwissProt Accessions	P09017	Gene names	HOXC4, HOX3E
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3E) (CP19).

HXC4_MOUSE
θ value	1.81305 (rank : 77)	NC score	0.060664 (rank : 177)
Query Neighborhood Hits	127	Target Neighborhood Hits	365	Shared Neighborhood Hits	54
SwissProt Accessions	Q08624	Gene names	Hoxc4, Hox-3.5, Hoxc-4
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3.5).

MBD6_HUMAN
θ value	1.81305 (rank : 78)	NC score	0.019711 (rank : 276)
Query Neighborhood Hits	127	Target Neighborhood Hits	349	Shared Neighborhood Hits	9
SwissProt Accessions	Q96DN6, Q8N3M0, Q8NA81, Q96Q00	Gene names	MBD6, KIAA1887
Domain Architecture	No domain graphic available
Description	Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding protein MBD6).

RD23B_MOUSE
θ value	1.81305 (rank : 79)	NC score	0.020656 (rank : 274)
Query Neighborhood Hits	127	Target Neighborhood Hits	189	Shared Neighborhood Hits	5
SwissProt Accessions	P54728	Gene names	Rad23b, Mhr23b
Domain Architecture
Description	UV excision repair protein RAD23 homolog B (mHR23B) (XP-C repair- complementing complex 58 kDa protein) (p58).

ZHX2_MOUSE
θ value	1.81305 (rank : 80)	NC score	0.096716 (rank : 58)
Query Neighborhood Hits	127	Target Neighborhood Hits	435	Shared Neighborhood Hits	45
SwissProt Accessions	Q8C0C0	Gene names	Zhx2, Afr1, Raf
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

ABI2_HUMAN
θ value	2.36792 (rank : 81)	NC score	0.008809 (rank : 296)
Query Neighborhood Hits	127	Target Neighborhood Hits	350	Shared Neighborhood Hits	6
SwissProt Accessions	Q9NYB9, Q13147, Q13249, Q13801, Q9BV70	Gene names	ABI2, ARGBPIA
Domain Architecture	No domain graphic available
Description	Abl interactor 2 (Abelson interactor 2) (Abi-2) (Abl-binding protein 3) (AblBP3) (Arg-binding protein 1) (ArgBP1).

ATN1_HUMAN
θ value	2.36792 (rank : 82)	NC score	0.015823 (rank : 281)
Query Neighborhood Hits	127	Target Neighborhood Hits	676	Shared Neighborhood Hits	9
SwissProt Accessions	P54259, Q99495, Q99621, Q9UEK7	Gene names	ATN1, DRPLA
Domain Architecture
Description	Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein).

BORG1_HUMAN
θ value	2.36792 (rank : 83)	NC score	0.039886 (rank : 267)
Query Neighborhood Hits	127	Target Neighborhood Hits	67	Shared Neighborhood Hits	6
SwissProt Accessions	O14613, Q9UNS0	Gene names	CDC42EP2, BORG1, CEP2
Domain Architecture	No domain graphic available
Description	Cdc42 effector protein 2 (Binder of Rho GTPases 1).

DDEF1_MOUSE
θ value	2.36792 (rank : 84)	NC score	0.007710 (rank : 299)
Query Neighborhood Hits	127	Target Neighborhood Hits	592	Shared Neighborhood Hits	9
SwissProt Accessions	Q9QWY8, O08612, Q80TG8, Q80UV6, Q99LV8, Q9Z2B6	Gene names	Ddef1, Asap1, Kiaa1249, Shag1
Domain Architecture
Description	130 kDa phosphatidylinositol 4,5-biphosphate-dependent ARF1 GTPase- activating protein (PIP2-dependent ARF1 GAP) (ADP-ribosylation factor- directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differentiation-enhancing factor 1) (Differentiation-enhancing factor 1) (DEF-1).

HXB4_HUMAN
θ value	2.36792 (rank : 85)	NC score	0.059720 (rank : 185)
Query Neighborhood Hits	127	Target Neighborhood Hits	376	Shared Neighborhood Hits	55
SwissProt Accessions	P17483, Q9NTA0	Gene names	HOXB4, HOX2F
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6).

MAML1_HUMAN
θ value	2.36792 (rank : 86)	NC score	0.028541 (rank : 271)
Query Neighborhood Hits	127	Target Neighborhood Hits	228	Shared Neighborhood Hits	12
SwissProt Accessions	Q92585, Q9NZ12	Gene names	MAML1, KIAA0200
Domain Architecture	No domain graphic available
Description	Mastermind-like protein 1 (Mam-1).

AUTS2_HUMAN
θ value	3.0926 (rank : 87)	NC score	0.030755 (rank : 268)
Query Neighborhood Hits	127	Target Neighborhood Hits	342	Shared Neighborhood Hits	10
SwissProt Accessions	Q8WXX7, Q9Y4F2	Gene names	AUTS2, KIAA0442
Domain Architecture	No domain graphic available
Description	Autism susceptibility gene 2 protein.

MAML3_HUMAN
θ value	3.0926 (rank : 88)	NC score	0.024266 (rank : 273)
Query Neighborhood Hits	127	Target Neighborhood Hits	323	Shared Neighborhood Hits	13
SwissProt Accessions	Q96JK9	Gene names	MAML3, KIAA1816
Domain Architecture	No domain graphic available
Description	Mastermind-like protein 3 (Mam-3).

MYPN_MOUSE
θ value	3.0926 (rank : 89)	NC score	0.005983 (rank : 303)
Query Neighborhood Hits	127	Target Neighborhood Hits	421	Shared Neighborhood Hits	8
SwissProt Accessions	Q5DTJ9, Q7TPW5, Q8BZ76	Gene names	Mypn, Kiaa4170
Domain Architecture	No domain graphic available
Description	Myopalladin.

SELV_HUMAN
θ value	3.0926 (rank : 90)	NC score	0.019857 (rank : 275)
Query Neighborhood Hits	127	Target Neighborhood Hits	118	Shared Neighborhood Hits	3
SwissProt Accessions	P59797	Gene names	SELV
Domain Architecture	No domain graphic available
Description	Selenoprotein V.

ACINU_HUMAN
θ value	4.03905 (rank : 91)	NC score	0.015459 (rank : 283)
Query Neighborhood Hits	127	Target Neighborhood Hits	828	Shared Neighborhood Hits	17
SwissProt Accessions	Q9UKV3, O75158, Q9UG91, Q9UKV1, Q9UKV2	Gene names	ACIN1, ACINUS, KIAA0670
Domain Architecture
Description	Apoptotic chromatin condensation inducer in the nucleus (Acinus).

CDT1_MOUSE
θ value	4.03905 (rank : 92)	NC score	0.017063 (rank : 279)
Query Neighborhood Hits	127	Target Neighborhood Hits	72	Shared Neighborhood Hits	3
SwissProt Accessions	Q8R4E9, Q8BUQ1, Q8BX29, Q8R3V0, Q8R4E8	Gene names	Cdt1, Ris2
Domain Architecture	No domain graphic available
Description	DNA replication factor Cdt1 (Double parked homolog) (DUP) (Retroviral insertion site 2 protein).

GORS2_MOUSE
θ value	4.03905 (rank : 93)	NC score	0.013189 (rank : 287)
Query Neighborhood Hits	127	Target Neighborhood Hits	89	Shared Neighborhood Hits	5
SwissProt Accessions	Q99JX3, Q3U9D2, Q8CCD0, Q91W68	Gene names	Gorasp2
Domain Architecture	No domain graphic available
Description	Golgi reassembly-stacking protein 2 (GRS2) (Golgi reassembly-stacking protein of 55 kDa) (GRASP55).

HXA10_HUMAN
θ value	4.03905 (rank : 94)	NC score	0.079141 (rank : 81)
Query Neighborhood Hits	127	Target Neighborhood Hits	334	Shared Neighborhood Hits	59
SwissProt Accessions	P31260, O43370, O43605, Q15949	Gene names	HOXA10, HOX1H
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1H) (Hox-1.8) (PL).

HXA10_MOUSE
θ value	4.03905 (rank : 95)	NC score	0.077900 (rank : 84)
Query Neighborhood Hits	127	Target Neighborhood Hits	365	Shared Neighborhood Hits	59
SwissProt Accessions	P31310, Q80Y22	Gene names	Hoxa10, Hox-1.8, Hoxa-10
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1.8).

HXB4_MOUSE
θ value	4.03905 (rank : 96)	NC score	0.058293 (rank : 197)
Query Neighborhood Hits	127	Target Neighborhood Hits	375	Shared Neighborhood Hits	54
SwissProt Accessions	P10284, Q3UZB4, Q4VBG0	Gene names	Hoxb4, Hox-2.6, Hoxb-4
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2.6).

SREC2_MOUSE
θ value	4.03905 (rank : 97)	NC score	0.001138 (rank : 308)
Query Neighborhood Hits	127	Target Neighborhood Hits	605	Shared Neighborhood Hits	5
SwissProt Accessions	P59222	Gene names	Scarf2, Srec2
Domain Architecture	No domain graphic available
Description	Scavenger receptor class F member 2 precursor (Scavenger receptor expressed by endothelial cells 2 protein) (SREC-II).

TAF4_HUMAN
θ value	4.03905 (rank : 98)	NC score	0.017839 (rank : 278)
Query Neighborhood Hits	127	Target Neighborhood Hits	687	Shared Neighborhood Hits	18
SwissProt Accessions	O00268, Q5TBP6, Q99721, Q9BR40, Q9BX42	Gene names	TAF4, TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135
Domain Architecture
Description	Transcription initiation factor TFIID subunit 4 (TBP-associated factor 4) (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130).

CBP_MOUSE
θ value	5.27518 (rank : 99)	NC score	0.015257 (rank : 284)
Query Neighborhood Hits	127	Target Neighborhood Hits	1051	Shared Neighborhood Hits	36
SwissProt Accessions	P45481	Gene names	Crebbp, Cbp
Domain Architecture
Description	CREB-binding protein (EC 2.3.1.48).

CK024_MOUSE
θ value	5.27518 (rank : 100)	NC score	0.018462 (rank : 277)
Query Neighborhood Hits	127	Target Neighborhood Hits	307	Shared Neighborhood Hits	14
SwissProt Accessions	Q9D8N1, Q8VCP2	Gene names
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C11orf24 homolog precursor.

EMX1_HUMAN
θ value	5.27518 (rank : 101)	NC score	0.065444 (rank : 144)
Query Neighborhood Hits	127	Target Neighborhood Hits	336	Shared Neighborhood Hits	63
SwissProt Accessions	Q04741, Q86XB0	Gene names	EMX1
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX1 (Empty spiracles homolog 1) (Empty spiracles- like protein 1).

EVI2B_MOUSE
θ value	5.27518 (rank : 102)	NC score	0.016369 (rank : 280)
Query Neighborhood Hits	127	Target Neighborhood Hits	87	Shared Neighborhood Hits	5
SwissProt Accessions	Q8VD58, Q3U1A3	Gene names	Evi2b
Domain Architecture	No domain graphic available
Description	EVI2B protein precursor (Ecotropic viral integration site 2B protein).

HXD11_HUMAN
θ value	5.27518 (rank : 103)	NC score	0.078280 (rank : 83)
Query Neighborhood Hits	127	Target Neighborhood Hits	353	Shared Neighborhood Hits	60
SwissProt Accessions	P31277, Q9NS02	Gene names	HOXD11, HOX4F
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4F).

HXD11_MOUSE
θ value	5.27518 (rank : 104)	NC score	0.071639 (rank : 107)
Query Neighborhood Hits	127	Target Neighborhood Hits	376	Shared Neighborhood Hits	59
SwissProt Accessions	P23813	Gene names	Hoxd11, Hox-4.6, Hoxd-11
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5).

HXD3_HUMAN
θ value	5.27518 (rank : 105)	NC score	0.062841 (rank : 168)
Query Neighborhood Hits	127	Target Neighborhood Hits	433	Shared Neighborhood Hits	58
SwissProt Accessions	P31249, Q99955, Q9BSC5	Gene names	HOXD3, HOX4A
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4A).

LHX2_HUMAN
θ value	5.27518 (rank : 106)	NC score	0.067574 (rank : 133)
Query Neighborhood Hits	127	Target Neighborhood Hits	432	Shared Neighborhood Hits	64
SwissProt Accessions	P50458, O95860, Q8N1Z3	Gene names	LHX2, LH2
Domain Architecture
Description	LIM/homeobox protein Lhx2 (Homeobox protein LH-2).

LHX2_MOUSE
θ value	5.27518 (rank : 107)	NC score	0.067959 (rank : 126)
Query Neighborhood Hits	127	Target Neighborhood Hits	431	Shared Neighborhood Hits	63
SwissProt Accessions	Q9Z0S2	Gene names	Lhx2
Domain Architecture
Description	LIM/homeobox protein Lhx2.

MINT_HUMAN
θ value	5.27518 (rank : 108)	NC score	0.008828 (rank : 295)
Query Neighborhood Hits	127	Target Neighborhood Hits	1291	Shared Neighborhood Hits	18
SwissProt Accessions	Q96T58, Q9H9A8, Q9NWH5, Q9UQ01, Q9Y556	Gene names	SPEN, KIAA0929, MINT, SHARP
Domain Architecture
Description	Msx2-interacting protein (SPEN homolog) (SMART/HDAC1-associated repressor protein).

MLL2_HUMAN
θ value	5.27518 (rank : 109)	NC score	0.014542 (rank : 285)
Query Neighborhood Hits	127	Target Neighborhood Hits	1788	Shared Neighborhood Hits	34
SwissProt Accessions	O14686, O14687	Gene names	MLL2, ALR
Domain Architecture
Description	Myeloid/lymphoid or mixed-lineage leukemia protein 2 (ALL1-related protein).

PO6F2_HUMAN
θ value	5.27518 (rank : 110)	NC score	0.075493 (rank : 92)
Query Neighborhood Hits	127	Target Neighborhood Hits	618	Shared Neighborhood Hits	59
SwissProt Accessions	P78424, P78425, Q75ME8, Q86UM6, Q9UDS7	Gene names	POU6F2, RPF1
Domain Architecture
Description	POU domain, class 6, transcription factor 2 (Retina-derived POU-domain factor 1) (RPF-1).

PO6F2_MOUSE
θ value	5.27518 (rank : 111)	NC score	0.076961 (rank : 85)
Query Neighborhood Hits	127	Target Neighborhood Hits	639	Shared Neighborhood Hits	58
SwissProt Accessions	Q8BJI4	Gene names	Pou6f2
Domain Architecture	No domain graphic available
Description	POU domain, class 6, transcription factor 2.

AAK1_MOUSE
θ value	6.88961 (rank : 112)	NC score	-0.002045 (rank : 309)
Query Neighborhood Hits	127	Target Neighborhood Hits	1051	Shared Neighborhood Hits	17
SwissProt Accessions	Q3UHJ0, Q3TY53, Q6ZPZ6, Q80XP6	Gene names	Aak1, Kiaa1048
Domain Architecture	No domain graphic available
Description	AP2-associated protein kinase 1 (EC 2.7.11.1) (Adaptor-associated kinase 1).

FMNL_MOUSE
θ value	6.88961 (rank : 113)	NC score	0.006621 (rank : 302)
Query Neighborhood Hits	127	Target Neighborhood Hits	428	Shared Neighborhood Hits	7
SwissProt Accessions	Q9JL26, Q6KAN4, Q9Z2V7	Gene names	Fmnl1, Frl
Domain Architecture	No domain graphic available
Description	Formin-like protein 1 (Formin-related protein).

MCL1_MOUSE
θ value	6.88961 (rank : 114)	NC score	0.010495 (rank : 289)
Query Neighborhood Hits	127	Target Neighborhood Hits	27	Shared Neighborhood Hits	2
SwissProt Accessions	P97287, Q3TUS0, Q792P0, Q9CRI4	Gene names	Mcl1
Domain Architecture	No domain graphic available
Description	Induced myeloid leukemia cell differentiation protein Mcl-1 homolog (Bcl-2-related protein EAT/mcl1).

MUC2_HUMAN
θ value	6.88961 (rank : 115)	NC score	0.013940 (rank : 286)
Query Neighborhood Hits	127	Target Neighborhood Hits	906	Shared Neighborhood Hits	22
SwissProt Accessions	Q02817, Q14878	Gene names	MUC2, SMUC
Domain Architecture
Description	Mucin-2 precursor (Intestinal mucin-2).

RANB9_HUMAN
θ value	6.88961 (rank : 116)	NC score	0.009677 (rank : 293)
Query Neighborhood Hits	127	Target Neighborhood Hits	179	Shared Neighborhood Hits	5
SwissProt Accessions	Q96S59, O94764, Q6P3T7, Q7LBR2, Q7Z7F9	Gene names	RANBP9, RANBPM
Domain Architecture	No domain graphic available
Description	Ran-binding protein 9 (RanBP9) (RanBP7) (Ran-binding protein M) (RanBPM) (BPM90) (BPM-L).

SYN1_MOUSE
θ value	6.88961 (rank : 117)	NC score	0.006835 (rank : 301)
Query Neighborhood Hits	127	Target Neighborhood Hits	363	Shared Neighborhood Hits	10
SwissProt Accessions	O88935, Q62279, Q8QZT8	Gene names	Syn1, Syn-1
Domain Architecture
Description	Synapsin-1 (Synapsin I).

CNKR2_HUMAN
θ value	8.99809 (rank : 118)	NC score	0.010080 (rank : 291)
Query Neighborhood Hits	127	Target Neighborhood Hits	197	Shared Neighborhood Hits	3
SwissProt Accessions	Q8WXI2, O94976, Q8WXI1	Gene names	CNKSR2, CNK2, KIAA0902, KSR2
Domain Architecture	No domain graphic available
Description	Connector enhancer of kinase suppressor of ras 2 (Connector enhancer of KSR2) (CNK2).

CNKR2_MOUSE
θ value	8.99809 (rank : 119)	NC score	0.010079 (rank : 292)
Query Neighborhood Hits	127	Target Neighborhood Hits	197	Shared Neighborhood Hits	3
SwissProt Accessions	Q80YA9, Q80TP2	Gene names	Cnksr2, Kiaa0902
Domain Architecture	No domain graphic available
Description	Connector enhancer of kinase suppressor of ras 2 (Connector enhancer of KSR2) (CNK2).

CUTL1_MOUSE
θ value	8.99809 (rank : 120)	NC score	0.075098 (rank : 94)
Query Neighborhood Hits	127	Target Neighborhood Hits	1620	Shared Neighborhood Hits	72
SwissProt Accessions	P53564, O08994, P70301, Q571L6, Q91ZD2	Gene names	Cutl1, Cux, Cux1, Kiaa4047
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein Cux).

FMN2_MOUSE
θ value	8.99809 (rank : 121)	NC score	0.006912 (rank : 300)
Query Neighborhood Hits	127	Target Neighborhood Hits	349	Shared Neighborhood Hits	11
SwissProt Accessions	Q9JL04	Gene names	Fmn2
Domain Architecture
Description	Formin-2.

LZTS2_MOUSE
θ value	8.99809 (rank : 122)	NC score	0.009468 (rank : 294)
Query Neighborhood Hits	127	Target Neighborhood Hits	423	Shared Neighborhood Hits	6
SwissProt Accessions	Q91YU6, Q569X6	Gene names	Lzts2, Kiaa1813
Domain Architecture
Description	Leucine zipper putative tumor suppressor 2.

MGR1_HUMAN
θ value	8.99809 (rank : 123)	NC score	0.002432 (rank : 307)
Query Neighborhood Hits	127	Target Neighborhood Hits	85	Shared Neighborhood Hits	2
SwissProt Accessions	Q13255, Q13256, Q14757, Q14758, Q5VTF7, Q5VTF8, Q9NU10, Q9UGS9, Q9UGT0	Gene names	GRM1, GPRC1A, MGLUR1
Domain Architecture
Description	Metabotropic glutamate receptor 1 precursor (mGluR1).

MUC1_MOUSE
θ value	8.99809 (rank : 124)	NC score	0.010162 (rank : 290)
Query Neighborhood Hits	127	Target Neighborhood Hits	388	Shared Neighborhood Hits	16
SwissProt Accessions	Q02496	Gene names	Muc1, Muc-1
Domain Architecture
Description	Mucin-1 precursor (Polymorphic epithelial mucin) (PEMT) (Episialin).

MYO15_MOUSE
θ value	8.99809 (rank : 125)	NC score	0.004017 (rank : 304)
Query Neighborhood Hits	127	Target Neighborhood Hits	467	Shared Neighborhood Hits	18
SwissProt Accessions	Q9QZZ4, O70395, Q9QWL6	Gene names	Myo15a, Myo15
Domain Architecture
Description	Myosin-15 (Myosin XV) (Unconventional myosin-15).

RD23B_HUMAN
θ value	8.99809 (rank : 126)	NC score	0.015552 (rank : 282)
Query Neighborhood Hits	127	Target Neighborhood Hits	115	Shared Neighborhood Hits	4
SwissProt Accessions	P54727, Q8WUB0	Gene names	RAD23B
Domain Architecture
Description	UV excision repair protein RAD23 homolog B (hHR23B) (XP-C repair- complementing complex 58 kDa protein) (p58).

ROBO4_MOUSE
θ value	8.99809 (rank : 127)	NC score	0.002517 (rank : 306)
Query Neighborhood Hits	127	Target Neighborhood Hits	358	Shared Neighborhood Hits	5
SwissProt Accessions	Q8C310, Q9DBW1	Gene names	Robo4
Domain Architecture
Description	Roundabout homolog 4 precursor.

ALX3_HUMAN
θ value	θ > 10 (rank : 128)	NC score	0.075106 (rank : 93)
Query Neighborhood Hits	127	Target Neighborhood Hits	380	Shared Neighborhood Hits	68
SwissProt Accessions	O95076, O95075	Gene names	ALX3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

ALX3_MOUSE
θ value	θ > 10 (rank : 129)	NC score	0.074978 (rank : 95)
Query Neighborhood Hits	127	Target Neighborhood Hits	386	Shared Neighborhood Hits	68
SwissProt Accessions	O70137	Gene names	Alx3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

ALX4_HUMAN
θ value	θ > 10 (rank : 130)	NC score	0.064947 (rank : 152)
Query Neighborhood Hits	127	Target Neighborhood Hits	394	Shared Neighborhood Hits	67
SwissProt Accessions	Q9H161, Q96JN7, Q9H198, Q9HAY9	Gene names	ALX4, KIAA1788
Domain Architecture
Description	Homeobox protein aristaless-like 4.

ALX4_MOUSE
θ value	θ > 10 (rank : 131)	NC score	0.067888 (rank : 127)
Query Neighborhood Hits	127	Target Neighborhood Hits	369	Shared Neighborhood Hits	71
SwissProt Accessions	O35137	Gene names	Alx4
Domain Architecture
Description	Homeobox protein aristaless-like 4 (ALX-4).

BARH1_HUMAN
θ value	θ > 10 (rank : 132)	NC score	0.052216 (rank : 240)
Query Neighborhood Hits	127	Target Neighborhood Hits	373	Shared Neighborhood Hits	66
SwissProt Accessions	Q9BZE3, Q9NY88	Gene names	BARHL1
Domain Architecture
Description	BarH-like 1 homeobox protein.

BARH2_HUMAN
θ value	θ > 10 (rank : 133)	NC score	0.050467 (rank : 264)
Query Neighborhood Hits	127	Target Neighborhood Hits	419	Shared Neighborhood Hits	63
SwissProt Accessions	Q9NY43, Q7Z4N7	Gene names	BARHL2
Domain Architecture
Description	BarH-like 2 homeobox protein.

BARH2_MOUSE
θ value	θ > 10 (rank : 134)	NC score	0.050320 (rank : 265)
Query Neighborhood Hits	127	Target Neighborhood Hits	397	Shared Neighborhood Hits	63
SwissProt Accessions	Q8VIB5, Q66L43	Gene names	Barhl2, Barh1, Mbh1
Domain Architecture	No domain graphic available
Description	BarH-like 2 homeobox protein (Bar-class homeodomain protein MBH1) (Homeobox protein B-H1).

BARX2_HUMAN
θ value	θ > 10 (rank : 135)	NC score	0.067699 (rank : 129)
Query Neighborhood Hits	127	Target Neighborhood Hits	387	Shared Neighborhood Hits	60
SwissProt Accessions	Q9UMQ3, O43518	Gene names	BARX2
Domain Architecture
Description	Homeobox protein BarH-like 2.

BARX2_MOUSE
θ value	θ > 10 (rank : 136)	NC score	0.064412 (rank : 157)
Query Neighborhood Hits	127	Target Neighborhood Hits	335	Shared Neighborhood Hits	60
SwissProt Accessions	O08686	Gene names	Barx2
Domain Architecture
Description	Homeobox protein BarH-like 2.

BSH_MOUSE
θ value	θ > 10 (rank : 137)	NC score	0.091387 (rank : 65)
Query Neighborhood Hits	127	Target Neighborhood Hits	349	Shared Neighborhood Hits	67
SwissProt Accessions	Q810B3	Gene names	Bsx
Domain Architecture	No domain graphic available
Description	Brain-specific homeobox protein homolog.

CART1_HUMAN
θ value	θ > 10 (rank : 138)	NC score	0.054316 (rank : 227)
Query Neighborhood Hits	127	Target Neighborhood Hits	348	Shared Neighborhood Hits	64
SwissProt Accessions	Q15699, Q546C8, Q96FH4	Gene names	CART1
Domain Architecture
Description	Cartilage homeoprotein 1 (CART-1).

CART1_MOUSE
θ value	θ > 10 (rank : 139)	NC score	0.053021 (rank : 236)
Query Neighborhood Hits	127	Target Neighborhood Hits	344	Shared Neighborhood Hits	61
SwissProt Accessions	Q8C8B0, Q8C370	Gene names	Cart1
Domain Architecture	No domain graphic available
Description	Cartilage homeoprotein 1 (CART-1).

CDX1_HUMAN
θ value	θ > 10 (rank : 140)	NC score	0.053082 (rank : 235)
Query Neighborhood Hits	127	Target Neighborhood Hits	382	Shared Neighborhood Hits	49
SwissProt Accessions	P47902, Q4VAU4, Q9NYK8	Gene names	CDX1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

CDX1_MOUSE
θ value	θ > 10 (rank : 141)	NC score	0.053954 (rank : 231)
Query Neighborhood Hits	127	Target Neighborhood Hits	379	Shared Neighborhood Hits	50
SwissProt Accessions	P18111, Q8VCF7	Gene names	Cdx1, Cdx-1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

CDX4_HUMAN
θ value	θ > 10 (rank : 142)	NC score	0.055177 (rank : 223)
Query Neighborhood Hits	127	Target Neighborhood Hits	366	Shared Neighborhood Hits	60
SwissProt Accessions	O14627, Q5JS20	Gene names	CDX4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

CDX4_MOUSE
θ value	θ > 10 (rank : 143)	NC score	0.057025 (rank : 207)
Query Neighborhood Hits	127	Target Neighborhood Hits	378	Shared Neighborhood Hits	61
SwissProt Accessions	Q07424	Gene names	Cdx4, Cdx-4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

CRX_HUMAN
θ value	θ > 10 (rank : 144)	NC score	0.050252 (rank : 266)
Query Neighborhood Hits	127	Target Neighborhood Hits	360	Shared Neighborhood Hits	58
SwissProt Accessions	O43186	Gene names	CRX, CORD2
Domain Architecture
Description	Cone-rod homeobox protein.

DBX1_MOUSE
θ value	θ > 10 (rank : 145)	NC score	0.063768 (rank : 160)
Query Neighborhood Hits	127	Target Neighborhood Hits	346	Shared Neighborhood Hits	54
SwissProt Accessions	P52950	Gene names	Dbx1, Dbx
Domain Architecture
Description	Homeobox protein DBX1.

DLX1_HUMAN
θ value	θ > 10 (rank : 146)	NC score	0.075502 (rank : 91)
Query Neighborhood Hits	127	Target Neighborhood Hits	343	Shared Neighborhood Hits	69
SwissProt Accessions	P56177, Q53ZU4, Q8IYB2	Gene names	DLX1
Domain Architecture
Description	Homeobox protein DLX-1.

DLX1_MOUSE
θ value	θ > 10 (rank : 147)	NC score	0.075507 (rank : 90)
Query Neighborhood Hits	127	Target Neighborhood Hits	343	Shared Neighborhood Hits	69
SwissProt Accessions	Q64317	Gene names	Dlx1
Domain Architecture
Description	Homeobox protein DLX-1.

DLX2_HUMAN
θ value	θ > 10 (rank : 148)	NC score	0.063262 (rank : 165)
Query Neighborhood Hits	127	Target Neighborhood Hits	355	Shared Neighborhood Hits	64
SwissProt Accessions	Q07687	Gene names	DLX2
Domain Architecture
Description	Homeobox protein DLX-2.

DLX2_MOUSE
θ value	θ > 10 (rank : 149)	NC score	0.063282 (rank : 164)
Query Neighborhood Hits	127	Target Neighborhood Hits	352	Shared Neighborhood Hits	64
SwissProt Accessions	P40764	Gene names	Dlx2, Tes-1, Tes1
Domain Architecture
Description	Homeobox protein DLX-2 (Homeobox protein TES-1).

DLX3_HUMAN
θ value	θ > 10 (rank : 150)	NC score	0.073408 (rank : 104)
Query Neighborhood Hits	127	Target Neighborhood Hits	369	Shared Neighborhood Hits	67
SwissProt Accessions	O60479	Gene names	DLX3
Domain Architecture
Description	Homeobox protein DLX-3.

DLX3_MOUSE
θ value	θ > 10 (rank : 151)	NC score	0.069969 (rank : 113)
Query Neighborhood Hits	127	Target Neighborhood Hits	367	Shared Neighborhood Hits	67
SwissProt Accessions	Q64205	Gene names	Dlx3
Domain Architecture
Description	Homeobox protein DLX-3.

DLX4_HUMAN
θ value	θ > 10 (rank : 152)	NC score	0.065463 (rank : 143)
Query Neighborhood Hits	127	Target Neighborhood Hits	350	Shared Neighborhood Hits	62
SwissProt Accessions	Q92988, O60480, Q13265, Q6PJK0, Q9HBE0	Gene names	DLX4, BP1, DLX7, DLX8
Domain Architecture	No domain graphic available
Description	Homeobox protein DLX-4 (DLX-7) (DLX-8) (Beta protein 1).

DLX4_MOUSE
θ value	θ > 10 (rank : 153)	NC score	0.068949 (rank : 122)
Query Neighborhood Hits	127	Target Neighborhood Hits	352	Shared Neighborhood Hits	63
SwissProt Accessions	P70436, Q3UM51, Q8R4I3	Gene names	Dlx4, Dlx7
Domain Architecture
Description	Homeobox protein DLX-4 (DLX-7).

DLX5_HUMAN
θ value	θ > 10 (rank : 154)	NC score	0.069373 (rank : 118)
Query Neighborhood Hits	127	Target Neighborhood Hits	405	Shared Neighborhood Hits	69
SwissProt Accessions	P56178, Q9UPL1	Gene names	DLX5
Domain Architecture
Description	Homeobox protein DLX-5.

DLX5_MOUSE
θ value	θ > 10 (rank : 155)	NC score	0.074224 (rank : 98)
Query Neighborhood Hits	127	Target Neighborhood Hits	434	Shared Neighborhood Hits	69
SwissProt Accessions	P70396, O54876, O54877, O54878, Q9JJ45	Gene names	Dlx5
Domain Architecture
Description	Homeobox protein DLX-5.

DLX6_HUMAN
θ value	θ > 10 (rank : 156)	NC score	0.081072 (rank : 76)
Query Neighborhood Hits	127	Target Neighborhood Hits	341	Shared Neighborhood Hits	73
SwissProt Accessions	P56179, Q3ZAR6, Q9UPL2	Gene names	DLX6
Domain Architecture
Description	Homeobox protein DLX-6.

DUX1_HUMAN
θ value	θ > 10 (rank : 157)	NC score	0.069910 (rank : 114)
Query Neighborhood Hits	127	Target Neighborhood Hits	330	Shared Neighborhood Hits	57
SwissProt Accessions	O43812	Gene names	DUX1
Domain Architecture	No domain graphic available
Description	Double homeobox protein 1.

DUX3_HUMAN
θ value	θ > 10 (rank : 158)	NC score	0.064190 (rank : 158)
Query Neighborhood Hits	127	Target Neighborhood Hits	312	Shared Neighborhood Hits	57
SwissProt Accessions	Q96PT4, Q9UND2	Gene names	DUX3
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 3.

DUX4_HUMAN
θ value	θ > 10 (rank : 159)	NC score	0.074064 (rank : 101)
Query Neighborhood Hits	127	Target Neighborhood Hits	403	Shared Neighborhood Hits	59
SwissProt Accessions	Q9UBX2	Gene names	DUX4, DUX10
Domain Architecture	No domain graphic available
Description	Double homeobox protein 4 (Double homeobox protein 10) (Double homeobox protein 4/10).

DUX5_HUMAN
θ value	θ > 10 (rank : 160)	NC score	0.069619 (rank : 117)
Query Neighborhood Hits	127	Target Neighborhood Hits	330	Shared Neighborhood Hits	57
SwissProt Accessions	Q96PT3	Gene names	DUX5
Domain Architecture	No domain graphic available
Description	Double homeobox protein 5.

EMX2_HUMAN
θ value	θ > 10 (rank : 161)	NC score	0.075520 (rank : 89)
Query Neighborhood Hits	127	Target Neighborhood Hits	341	Shared Neighborhood Hits	63
SwissProt Accessions	Q04743, Q96NN8, Q9BQF4	Gene names	EMX2
Domain Architecture
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

EMX2_MOUSE
θ value	θ > 10 (rank : 162)	NC score	0.076025 (rank : 88)
Query Neighborhood Hits	127	Target Neighborhood Hits	340	Shared Neighborhood Hits	64
SwissProt Accessions	Q04744, Q80UE7	Gene names	Emx2, Emx-2
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

GSCL_HUMAN
θ value	θ > 10 (rank : 163)	NC score	0.050911 (rank : 262)
Query Neighborhood Hits	127	Target Neighborhood Hits	343	Shared Neighborhood Hits	52
SwissProt Accessions	O15499	Gene names	GSCL
Domain Architecture
Description	Homeobox protein goosecoid-like (GSC-2).

GSCL_MOUSE
θ value	θ > 10 (rank : 164)	NC score	0.051315 (rank : 257)
Query Neighborhood Hits	127	Target Neighborhood Hits	339	Shared Neighborhood Hits	52
SwissProt Accessions	P56916	Gene names	Gscl
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid-like (GSC-2).

GSC_HUMAN
θ value	θ > 10 (rank : 165)	NC score	0.071075 (rank : 108)
Query Neighborhood Hits	127	Target Neighborhood Hits	369	Shared Neighborhood Hits	66
SwissProt Accessions	P56915, Q86YR1	Gene names	GSC
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid.

GSC_MOUSE
θ value	θ > 10 (rank : 166)	NC score	0.069702 (rank : 116)
Query Neighborhood Hits	127	Target Neighborhood Hits	368	Shared Neighborhood Hits	63
SwissProt Accessions	Q02591	Gene names	Gsc
Domain Architecture
Description	Homeobox protein goosecoid.

GSH2_HUMAN
θ value	θ > 10 (rank : 167)	NC score	0.058773 (rank : 194)
Query Neighborhood Hits	127	Target Neighborhood Hits	324	Shared Neighborhood Hits	56
SwissProt Accessions	Q9BZM3	Gene names	GSH2
Domain Architecture
Description	Homeobox protein GSH-2.

GSH2_MOUSE
θ value	θ > 10 (rank : 168)	NC score	0.059715 (rank : 186)
Query Neighborhood Hits	127	Target Neighborhood Hits	319	Shared Neighborhood Hits	56
SwissProt Accessions	P31316	Gene names	Gsh2, Gsh-2
Domain Architecture
Description	Homeobox protein GSH-2.

GSHI_HUMAN
θ value	θ > 10 (rank : 169)	NC score	0.052041 (rank : 245)
Query Neighborhood Hits	127	Target Neighborhood Hits	314	Shared Neighborhood Hits	53
SwissProt Accessions	Q9H4S2	Gene names	GSH1
Domain Architecture
Description	Homeobox protein GSH-1.

GSHI_MOUSE
θ value	θ > 10 (rank : 170)	NC score	0.053461 (rank : 234)
Query Neighborhood Hits	127	Target Neighborhood Hits	313	Shared Neighborhood Hits	53
SwissProt Accessions	P31315	Gene names	Gsh1, Gsh-1
Domain Architecture
Description	Homeobox protein GSH-1.

HESX1_HUMAN
θ value	θ > 10 (rank : 171)	NC score	0.054108 (rank : 230)
Query Neighborhood Hits	127	Target Neighborhood Hits	326	Shared Neighborhood Hits	51
SwissProt Accessions	Q9UBX0, Q99667	Gene names	HESX1, HANF
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (hAnf).

HESX1_MOUSE
θ value	θ > 10 (rank : 172)	NC score	0.059601 (rank : 190)
Query Neighborhood Hits	127	Target Neighborhood Hits	331	Shared Neighborhood Hits	52
SwissProt Accessions	Q61658, Q61047	Gene names	Hesx1, Hes-1, Rpx
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (Anterior- restricted homeobox protein) (Rathke pouch homeo box).

HHEX_HUMAN
θ value	θ > 10 (rank : 173)	NC score	0.060117 (rank : 182)
Query Neighborhood Hits	127	Target Neighborhood Hits	358	Shared Neighborhood Hits	51
SwissProt Accessions	Q03014	Gene names	HHEX, HEX, PRH, PRHX
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

HHEX_MOUSE
θ value	θ > 10 (rank : 174)	NC score	0.056498 (rank : 212)
Query Neighborhood Hits	127	Target Neighborhood Hits	350	Shared Neighborhood Hits	53
SwissProt Accessions	P43120	Gene names	Hhex, Prhx
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

HLX1_HUMAN
θ value	θ > 10 (rank : 175)	NC score	0.074070 (rank : 100)
Query Neighborhood Hits	127	Target Neighborhood Hits	370	Shared Neighborhood Hits	63
SwissProt Accessions	Q14774, Q15988	Gene names	HLX1
Domain Architecture
Description	Homeobox protein HLX1 (Homeobox protein HB24).

HLX1_MOUSE
θ value	θ > 10 (rank : 176)	NC score	0.068590 (rank : 123)
Query Neighborhood Hits	127	Target Neighborhood Hits	362	Shared Neighborhood Hits	60
SwissProt Accessions	Q61670	Gene names	Hlx1, Hlx
Domain Architecture
Description	Homeobox protein HLX1.

HLXB9_HUMAN
θ value	θ > 10 (rank : 177)	NC score	0.059583 (rank : 191)
Query Neighborhood Hits	127	Target Neighborhood Hits	336	Shared Neighborhood Hits	59
SwissProt Accessions	P50219, Q9Y648	Gene names	HLXB9
Domain Architecture
Description	Homeobox protein HB9.

HLXB9_MOUSE
θ value	θ > 10 (rank : 178)	NC score	0.057792 (rank : 200)
Query Neighborhood Hits	127	Target Neighborhood Hits	354	Shared Neighborhood Hits	63
SwissProt Accessions	Q9QZW9	Gene names	Hlxb9
Domain Architecture
Description	Homeobox protein HB9.

HMBX1_HUMAN
θ value	θ > 10 (rank : 179)	NC score	0.067580 (rank : 132)
Query Neighborhood Hits	127	Target Neighborhood Hits	118	Shared Neighborhood Hits	25
SwissProt Accessions	Q6NT76, Q3Y6P1, Q96GS5, Q9H701	Gene names	HMBOX1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

HMBX1_MOUSE
θ value	θ > 10 (rank : 180)	NC score	0.052467 (rank : 237)
Query Neighborhood Hits	127	Target Neighborhood Hits	117	Shared Neighborhood Hits	21
SwissProt Accessions	Q8BJA3, Q80WC2, Q8BWE7, Q99LV1	Gene names	Hmbox1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

HME1_HUMAN
θ value	θ > 10 (rank : 181)	NC score	0.061404 (rank : 171)
Query Neighborhood Hits	127	Target Neighborhood Hits	384	Shared Neighborhood Hits	59
SwissProt Accessions	Q05925	Gene names	EN1
Domain Architecture
Description	Homeobox protein engrailed-1 (Hu-En-1).

HME1_MOUSE
θ value	θ > 10 (rank : 182)	NC score	0.061224 (rank : 174)
Query Neighborhood Hits	127	Target Neighborhood Hits	397	Shared Neighborhood Hits	59
SwissProt Accessions	P09065	Gene names	En1, En-1
Domain Architecture
Description	Homeobox protein engrailed-1 (Mo-En-1).

HME2_HUMAN
θ value	θ > 10 (rank : 183)	NC score	0.068220 (rank : 124)
Query Neighborhood Hits	127	Target Neighborhood Hits	355	Shared Neighborhood Hits	67
SwissProt Accessions	P19622	Gene names	EN2
Domain Architecture
Description	Homeobox protein engrailed-2 (Hu-En-2).

HME2_MOUSE
θ value	θ > 10 (rank : 184)	NC score	0.068014 (rank : 125)
Query Neighborhood Hits	127	Target Neighborhood Hits	352	Shared Neighborhood Hits	67
SwissProt Accessions	P09066	Gene names	En2, En-2
Domain Architecture
Description	Homeobox protein engrailed-2 (Mo-En-2).

HMX2_MOUSE
θ value	θ > 10 (rank : 185)	NC score	0.061159 (rank : 175)
Query Neighborhood Hits	127	Target Neighborhood Hits	354	Shared Neighborhood Hits	63
SwissProt Accessions	P43687, Q8R1Q2	Gene names	Hmx2, Nkx-5.2, Nkx5-2
Domain Architecture
Description	Homeobox protein HMX2 (Homeobox protein Nkx-5.2).

HMX3_MOUSE
θ value	θ > 10 (rank : 186)	NC score	0.051458 (rank : 254)
Query Neighborhood Hits	127	Target Neighborhood Hits	342	Shared Neighborhood Hits	56
SwissProt Accessions	P42581	Gene names	Hmx3, Nkx-5.1, Nkx5-1
Domain Architecture
Description	Homeobox protein HMX3 (Homeobox protein Nkx-5.1).

HXA11_HUMAN
θ value	θ > 10 (rank : 187)	NC score	0.053778 (rank : 232)
Query Neighborhood Hits	127	Target Neighborhood Hits	334	Shared Neighborhood Hits	44
SwissProt Accessions	P31270	Gene names	HOXA11, HOX1I
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1I).

HXA11_MOUSE
θ value	θ > 10 (rank : 188)	NC score	0.055092 (rank : 225)
Query Neighborhood Hits	127	Target Neighborhood Hits	327	Shared Neighborhood Hits	44
SwissProt Accessions	P31311, Q3V026	Gene names	Hoxa11, Hox-1.9, Hoxa-11
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1.9).

HXA13_HUMAN
θ value	θ > 10 (rank : 189)	NC score	0.067165 (rank : 137)
Query Neighborhood Hits	127	Target Neighborhood Hits	353	Shared Neighborhood Hits	65
SwissProt Accessions	P31271, O43371	Gene names	HOXA13, HOX1J
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1J).

HXA13_MOUSE
θ value	θ > 10 (rank : 190)	NC score	0.067596 (rank : 131)
Query Neighborhood Hits	127	Target Neighborhood Hits	351	Shared Neighborhood Hits	65
SwissProt Accessions	Q62424	Gene names	Hoxa13, Hox-1.10
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1.10).

HXA1_HUMAN
θ value	θ > 10 (rank : 191)	NC score	0.072419 (rank : 106)
Query Neighborhood Hits	127	Target Neighborhood Hits	334	Shared Neighborhood Hits	56
SwissProt Accessions	P49639, O43363	Gene names	HOXA1, HOX1F
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1F).

HXA1_MOUSE
θ value	θ > 10 (rank : 192)	NC score	0.073429 (rank : 103)
Query Neighborhood Hits	127	Target Neighborhood Hits	341	Shared Neighborhood Hits	58
SwissProt Accessions	P09022, P15463	Gene names	Hoxa1, Era-1, Hox-1.6, Hoxa-1
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein ERA-1-399).

HXA3_HUMAN
θ value	θ > 10 (rank : 193)	NC score	0.058238 (rank : 198)
Query Neighborhood Hits	127	Target Neighborhood Hits	535	Shared Neighborhood Hits	60
SwissProt Accessions	O43365	Gene names	HOXA3, HOX1E
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1E).

HXA3_MOUSE
θ value	θ > 10 (rank : 194)	NC score	0.060206 (rank : 181)
Query Neighborhood Hits	127	Target Neighborhood Hits	558	Shared Neighborhood Hits	65
SwissProt Accessions	P02831, Q4V9Z8, Q61197	Gene names	Hoxa3, Hox-1.5, Hoxa-3
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1.5) (MO-10).

HXA4_HUMAN
θ value	θ > 10 (rank : 195)	NC score	0.053519 (rank : 233)
Query Neighborhood Hits	127	Target Neighborhood Hits	370	Shared Neighborhood Hits	52
SwissProt Accessions	Q00056, O43366	Gene names	HOXA4, HOX1D
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4).

HXA4_MOUSE
θ value	θ > 10 (rank : 196)	NC score	0.058925 (rank : 193)
Query Neighborhood Hits	127	Target Neighborhood Hits	379	Shared Neighborhood Hits	56
SwissProt Accessions	P06798, Q61684, Q64388, Q8BPE6	Gene names	Hoxa4, Hox-1.4, Hoxa-4
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1.4) (Homeobox protein MH-3).

HXA6_HUMAN
θ value	θ > 10 (rank : 197)	NC score	0.070174 (rank : 112)
Query Neighborhood Hits	127	Target Neighborhood Hits	309	Shared Neighborhood Hits	54
SwissProt Accessions	P31267, Q9UPM0	Gene names	HOXA6, HOX1B
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A6 (Hox-1B).

HXA6_MOUSE
θ value	θ > 10 (rank : 198)	NC score	0.067838 (rank : 128)
Query Neighborhood Hits	127	Target Neighborhood Hits	304	Shared Neighborhood Hits	52
SwissProt Accessions	P09092, Q9JI98	Gene names	Hoxa6, Hox-1.2, Hoxa-6
Domain Architecture
Description	Homeobox protein Hox-A6 (Hox-1.2) (M5-4).

HXA7_HUMAN
θ value	θ > 10 (rank : 199)	NC score	0.067227 (rank : 136)
Query Neighborhood Hits	127	Target Neighborhood Hits	309	Shared Neighborhood Hits	51
SwissProt Accessions	P31268, O43368, O43486, O95655, Q9NSC8, Q9UDM1	Gene names	HOXA7, HOX1A
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1A) (Hox 1.1).

HXA7_MOUSE
θ value	θ > 10 (rank : 200)	NC score	0.076225 (rank : 87)
Query Neighborhood Hits	127	Target Neighborhood Hits	318	Shared Neighborhood Hits	54
SwissProt Accessions	P02830, Q544P0	Gene names	Hoxa7, Hox-1.1, Hoxa-7
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1.1) (M6-12) (M6).

HXA9_HUMAN
θ value	θ > 10 (rank : 201)	NC score	0.067367 (rank : 135)
Query Neighborhood Hits	127	Target Neighborhood Hits	332	Shared Neighborhood Hits	62
SwissProt Accessions	P31269, O43369, O43429, Q99820	Gene names	HOXA9, HOX1G
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1G).

HXA9_MOUSE
θ value	θ > 10 (rank : 202)	NC score	0.067492 (rank : 134)
Query Neighborhood Hits	127	Target Neighborhood Hits	334	Shared Neighborhood Hits	62
SwissProt Accessions	P09631, O70154, O70155	Gene names	Hoxa9, Hox-1.7, Hoxa-9
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1.7).

HXB13_HUMAN
θ value	θ > 10 (rank : 203)	NC score	0.070979 (rank : 110)
Query Neighborhood Hits	127	Target Neighborhood Hits	377	Shared Neighborhood Hits	64
SwissProt Accessions	Q92826, Q96QM4, Q99810	Gene names	HOXB13
Domain Architecture
Description	Homeobox protein Hox-B13.

HXB13_MOUSE
θ value	θ > 10 (rank : 204)	NC score	0.064699 (rank : 155)
Query Neighborhood Hits	127	Target Neighborhood Hits	384	Shared Neighborhood Hits	63
SwissProt Accessions	P70321, Q80Y12	Gene names	Hoxb13
Domain Architecture
Description	Homeobox protein Hox-B13.

HXB1_HUMAN
θ value	θ > 10 (rank : 205)	NC score	0.063702 (rank : 162)
Query Neighborhood Hits	127	Target Neighborhood Hits	356	Shared Neighborhood Hits	59
SwissProt Accessions	P14653	Gene names	HOXB1, HOX2I
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2I).

HXB1_MOUSE
θ value	θ > 10 (rank : 206)	NC score	0.063455 (rank : 163)
Query Neighborhood Hits	127	Target Neighborhood Hits	341	Shared Neighborhood Hits	58
SwissProt Accessions	P17919, Q3ZAY6, Q9CYH3	Gene names	Hoxb1, Hox-2.9, Hoxb-1
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2.9).

HXB3_HUMAN
θ value	θ > 10 (rank : 207)	NC score	0.055348 (rank : 219)
Query Neighborhood Hits	127	Target Neighborhood Hits	559	Shared Neighborhood Hits	65
SwissProt Accessions	P14651, O95615, P17484	Gene names	HOXB3, HOX2G
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2G) (Hox-2.7).

HXB3_MOUSE
θ value	θ > 10 (rank : 208)	NC score	0.052164 (rank : 242)
Query Neighborhood Hits	127	Target Neighborhood Hits	493	Shared Neighborhood Hits	63
SwissProt Accessions	P09026, P10285, Q4PJ06, Q61680	Gene names	Hoxb3, Hox-2.7, Hoxb-3
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2.7) (Homeobox protein MH-23).

HXB5_HUMAN
θ value	θ > 10 (rank : 209)	NC score	0.051150 (rank : 260)
Query Neighborhood Hits	127	Target Neighborhood Hits	332	Shared Neighborhood Hits	52
SwissProt Accessions	P09067, P09069	Gene names	HOXB5, HOX2A
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2A) (HHO.C10) (HU-1).

HXB5_MOUSE
θ value	θ > 10 (rank : 210)	NC score	0.051171 (rank : 259)
Query Neighborhood Hits	127	Target Neighborhood Hits	337	Shared Neighborhood Hits	53
SwissProt Accessions	P09079, Q3ZAY8	Gene names	Hoxb5, Hox-2.1, Hoxb-5
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2.1) (MU-1) (H24.1).

HXB6_HUMAN
θ value	θ > 10 (rank : 211)	NC score	0.065678 (rank : 141)
Query Neighborhood Hits	127	Target Neighborhood Hits	307	Shared Neighborhood Hits	53
SwissProt Accessions	P17509, P09068, Q9HB11, Q9UGH2	Gene names	HOXB6, HOX2B
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2B) (Hox-2.2) (HU-2).

HXB6_MOUSE
θ value	θ > 10 (rank : 212)	NC score	0.065325 (rank : 149)
Query Neighborhood Hits	127	Target Neighborhood Hits	309	Shared Neighborhood Hits	53
SwissProt Accessions	P09023	Gene names	Hoxb6, Hox-2.2, Hoxb-6
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2.2) (Homeobox protein MH-22A).

HXB7_HUMAN
θ value	θ > 10 (rank : 213)	NC score	0.070489 (rank : 111)
Query Neighborhood Hits	127	Target Neighborhood Hits	311	Shared Neighborhood Hits	52
SwissProt Accessions	P09629, Q15957	Gene names	HOXB7, HOX2C
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2C) (HHO.C1).

HXB7_MOUSE
θ value	θ > 10 (rank : 214)	NC score	0.073541 (rank : 102)
Query Neighborhood Hits	127	Target Neighborhood Hits	314	Shared Neighborhood Hits	53
SwissProt Accessions	P09024, Q3UW15	Gene names	Hoxb7, Hox-2.3, Hoxb-7
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (Homeobox protein MH-22B).

HXB8_HUMAN
θ value	θ > 10 (rank : 215)	NC score	0.081205 (rank : 75)
Query Neighborhood Hits	127	Target Neighborhood Hits	324	Shared Neighborhood Hits	53
SwissProt Accessions	P17481, Q9H1I2	Gene names	HOXB8, HOX2D
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2D) (Hox-2.4).

HXB8_MOUSE
θ value	θ > 10 (rank : 216)	NC score	0.080894 (rank : 77)
Query Neighborhood Hits	127	Target Neighborhood Hits	325	Shared Neighborhood Hits	54
SwissProt Accessions	P09632	Gene names	Hoxb8, Hox-2.4, Hoxb-8
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2.4).

HXB9_HUMAN
θ value	θ > 10 (rank : 217)	NC score	0.057945 (rank : 199)
Query Neighborhood Hits	127	Target Neighborhood Hits	344	Shared Neighborhood Hits	54
SwissProt Accessions	P17482, Q9H1I1	Gene names	HOXB9, HOX2E
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2E) (Hox-2.5).

HXB9_MOUSE
θ value	θ > 10 (rank : 218)	NC score	0.059693 (rank : 187)
Query Neighborhood Hits	127	Target Neighborhood Hits	344	Shared Neighborhood Hits	55
SwissProt Accessions	P20615	Gene names	Hoxb9, Hox-2.5, Hoxb-9
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2.5).

HXC11_HUMAN
θ value	θ > 10 (rank : 219)	NC score	0.069177 (rank : 119)
Query Neighborhood Hits	127	Target Neighborhood Hits	349	Shared Neighborhood Hits	54
SwissProt Accessions	O43248, Q96DH2	Gene names	HOXC11
Domain Architecture
Description	Homeobox protein Hox-C11.

HXC13_HUMAN
θ value	θ > 10 (rank : 220)	NC score	0.057665 (rank : 201)
Query Neighborhood Hits	127	Target Neighborhood Hits	336	Shared Neighborhood Hits	62
SwissProt Accessions	P31276, Q96J32, Q9NR24, Q9NYD5	Gene names	HOXC13, HOX3G
Domain Architecture
Description	Homeobox protein Hox-C13 (Hox-3G).

HXC13_MOUSE
θ value	θ > 10 (rank : 221)	NC score	0.057650 (rank : 202)
Query Neighborhood Hits	127	Target Neighborhood Hits	337	Shared Neighborhood Hits	62
SwissProt Accessions	P50207, Q53Z78, Q920I7	Gene names	Hoxc13, Hoxc-13
Domain Architecture
Description	Homeobox protein Hox-C13.

HXC5_HUMAN
θ value	θ > 10 (rank : 222)	NC score	0.051756 (rank : 250)
Query Neighborhood Hits	127	Target Neighborhood Hits	316	Shared Neighborhood Hits	47
SwissProt Accessions	Q00444	Gene names	HOXC5, HOX3D
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3D) (CP11).

HXC5_MOUSE
θ value	θ > 10 (rank : 223)	NC score	0.051488 (rank : 253)
Query Neighborhood Hits	127	Target Neighborhood Hits	316	Shared Neighborhood Hits	47
SwissProt Accessions	P32043, Q8BJW4	Gene names	Hoxc5, Hox-3.4, Hoxc-5
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3.4) (Hox-6.2).

HXC6_HUMAN
θ value	θ > 10 (rank : 224)	NC score	0.059627 (rank : 188)
Query Neighborhood Hits	127	Target Neighborhood Hits	306	Shared Neighborhood Hits	51
SwissProt Accessions	P09630	Gene names	HOXC6, HOX3C
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3C) (HHO.C8) (CP25).

HXC6_MOUSE
θ value	θ > 10 (rank : 225)	NC score	0.059627 (rank : 189)
Query Neighborhood Hits	127	Target Neighborhood Hits	306	Shared Neighborhood Hits	51
SwissProt Accessions	P10629, Q61683	Gene names	Hoxc6, Hox-3.3, Hoxc-6
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3.3) (Hox-6.1).

HXC8_HUMAN
θ value	θ > 10 (rank : 226)	NC score	0.082644 (rank : 74)
Query Neighborhood Hits	127	Target Neighborhood Hits	327	Shared Neighborhood Hits	58
SwissProt Accessions	P31273, O15221, O15362	Gene names	HOXC8, HOX3A
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3A).

HXC8_MOUSE
θ value	θ > 10 (rank : 227)	NC score	0.082647 (rank : 73)
Query Neighborhood Hits	127	Target Neighborhood Hits	327	Shared Neighborhood Hits	58
SwissProt Accessions	P09025	Gene names	Hoxc8, Hox-3.1, Hoxc-8
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3.1) (M31).

HXC9_HUMAN
θ value	θ > 10 (rank : 228)	NC score	0.065311 (rank : 150)
Query Neighborhood Hits	127	Target Neighborhood Hits	339	Shared Neighborhood Hits	59
SwissProt Accessions	P31274, Q9H1I0	Gene names	HOXC9, HOX3B
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3B).

HXC9_MOUSE
θ value	θ > 10 (rank : 229)	NC score	0.065326 (rank : 148)
Query Neighborhood Hits	127	Target Neighborhood Hits	338	Shared Neighborhood Hits	59
SwissProt Accessions	P09633	Gene names	Hoxc9, Hox-3.2, Hoxc-9
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3.2).

HXD12_HUMAN
θ value	θ > 10 (rank : 230)	NC score	0.051423 (rank : 255)
Query Neighborhood Hits	127	Target Neighborhood Hits	334	Shared Neighborhood Hits	46
SwissProt Accessions	P35452, Q9NS03	Gene names	HOXD12, HOX4H
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4H).

HXD12_MOUSE
θ value	θ > 10 (rank : 231)	NC score	0.051176 (rank : 258)
Query Neighborhood Hits	127	Target Neighborhood Hits	370	Shared Neighborhood Hits	47
SwissProt Accessions	P23812	Gene names	Hoxd12, Hox-4.7, Hoxd-12
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4.7) (Hox-5.6).

HXD13_HUMAN
θ value	θ > 10 (rank : 232)	NC score	0.062844 (rank : 167)
Query Neighborhood Hits	127	Target Neighborhood Hits	332	Shared Neighborhood Hits	62
SwissProt Accessions	P35453	Gene names	HOXD13, HOX4I
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4I).

HXD13_MOUSE
θ value	θ > 10 (rank : 233)	NC score	0.062887 (rank : 166)
Query Neighborhood Hits	127	Target Neighborhood Hits	324	Shared Neighborhood Hits	62
SwissProt Accessions	P70217, Q2VPB0, Q2VPB1, Q64177	Gene names	Hoxd13, Hox-4.8
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4.8).

HXD1_HUMAN
θ value	θ > 10 (rank : 234)	NC score	0.065371 (rank : 146)
Query Neighborhood Hits	127	Target Neighborhood Hits	337	Shared Neighborhood Hits	57
SwissProt Accessions	Q9GZZ0	Gene names	HOXD1
Domain Architecture
Description	Homeobox protein Hox-D1.

HXD1_MOUSE
θ value	θ > 10 (rank : 235)	NC score	0.067687 (rank : 130)
Query Neighborhood Hits	127	Target Neighborhood Hits	381	Shared Neighborhood Hits	58
SwissProt Accessions	Q01822	Gene names	Hoxd1, Hox-4.9, Hoxd-1
Domain Architecture
Description	Homeobox protein Hox-D1 (Hox-4.9).

HXD4_HUMAN
θ value	θ > 10 (rank : 236)	NC score	0.051749 (rank : 251)
Query Neighborhood Hits	127	Target Neighborhood Hits	337	Shared Neighborhood Hits	48
SwissProt Accessions	P09016, Q96AU0	Gene names	HOXD4, HOX4B
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4B) (Hox-5.1) (HHO.C13).

HXD4_MOUSE
θ value	θ > 10 (rank : 237)	NC score	0.051401 (rank : 256)
Query Neighborhood Hits	127	Target Neighborhood Hits	339	Shared Neighborhood Hits	48
SwissProt Accessions	P10628, P97451, Q3UXL6	Gene names	Hoxd4, Hox-4.2, Hoxd-4
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4.2) (Hox-5.1).

HXD8_HUMAN
θ value	θ > 10 (rank : 238)	NC score	0.080056 (rank : 80)
Query Neighborhood Hits	127	Target Neighborhood Hits	338	Shared Neighborhood Hits	54
SwissProt Accessions	P13378	Gene names	HOXD8, HOX4E
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4).

HXD8_MOUSE
θ value	θ > 10 (rank : 239)	NC score	0.080549 (rank : 79)
Query Neighborhood Hits	127	Target Neighborhood Hits	333	Shared Neighborhood Hits	54
SwissProt Accessions	P23463	Gene names	Hoxd8, Hox-4.3, Hoxd-8
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4).

HXD9_HUMAN
θ value	θ > 10 (rank : 240)	NC score	0.061380 (rank : 172)
Query Neighborhood Hits	127	Target Neighborhood Hits	352	Shared Neighborhood Hits	58
SwissProt Accessions	P28356	Gene names	HOXD9, HOX4C
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4C) (Hox-5.2).

HXD9_MOUSE
θ value	θ > 10 (rank : 241)	NC score	0.061233 (rank : 173)
Query Neighborhood Hits	127	Target Neighborhood Hits	359	Shared Neighborhood Hits	58
SwissProt Accessions	P28357, Q3UYS2	Gene names	Hoxd9, Hox-4.4, Hoxd-9
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4.4) (Hox-5.2).

IPF1_HUMAN
θ value	θ > 10 (rank : 242)	NC score	0.057031 (rank : 206)
Query Neighborhood Hits	127	Target Neighborhood Hits	330	Shared Neighborhood Hits	54
SwissProt Accessions	P52945, O60594	Gene names	IPF1, PDX1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Pancreas/duodenum homeobox 1) (PDX- 1) (Islet/duodenum homeobox-1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Insulin upstream factor 1) (IUF-1) (Glucose- sensitive factor) (GSF).

IPF1_MOUSE
θ value	θ > 10 (rank : 243)	NC score	0.058436 (rank : 195)
Query Neighborhood Hits	127	Target Neighborhood Hits	340	Shared Neighborhood Hits	56
SwissProt Accessions	P52946	Gene names	Ipf1, Pdx1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox 1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Pancreas/duodenum homeobox 1).

ISL2_MOUSE
θ value	θ > 10 (rank : 244)	NC score	0.050640 (rank : 263)
Query Neighborhood Hits	127	Target Neighborhood Hits	426	Shared Neighborhood Hits	54
SwissProt Accessions	Q9CXV0	Gene names	Isl2
Domain Architecture
Description	Insulin gene enhancer protein ISL-2 (Islet-2).

LBX1_HUMAN
θ value	θ > 10 (rank : 245)	NC score	0.091539 (rank : 63)
Query Neighborhood Hits	127	Target Neighborhood Hits	357	Shared Neighborhood Hits	73
SwissProt Accessions	P52954	Gene names	LBX1
Domain Architecture
Description	Transcription factor LBX1.

LBX1_MOUSE
θ value	θ > 10 (rank : 246)	NC score	0.091682 (rank : 62)
Query Neighborhood Hits	127	Target Neighborhood Hits	349	Shared Neighborhood Hits	70
SwissProt Accessions	P52955	Gene names	Lbx1, Lbx1h
Domain Architecture
Description	Transcription factor LBX1.

LHX3_HUMAN
θ value	θ > 10 (rank : 247)	NC score	0.051866 (rank : 249)
Query Neighborhood Hits	127	Target Neighborhood Hits	474	Shared Neighborhood Hits	72
SwissProt Accessions	Q9UBR4, Q9NZB5, Q9P0I8, Q9P0I9	Gene names	LHX3
Domain Architecture
Description	LIM/homeobox protein Lhx3.

LHX4_HUMAN
θ value	θ > 10 (rank : 248)	NC score	0.055601 (rank : 217)
Query Neighborhood Hits	127	Target Neighborhood Hits	455	Shared Neighborhood Hits	66
SwissProt Accessions	Q969G2, Q8NHE0, Q8TCJ1, Q8WWX2, Q969W2	Gene names	LHX4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

LHX4_MOUSE
θ value	θ > 10 (rank : 249)	NC score	0.055727 (rank : 215)
Query Neighborhood Hits	127	Target Neighborhood Hits	457	Shared Neighborhood Hits	66
SwissProt Accessions	P53776, O08916, Q9R280	Gene names	Lhx4, Gsh-4, Gsh4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

LHX9_HUMAN
θ value	θ > 10 (rank : 250)	NC score	0.065403 (rank : 145)
Query Neighborhood Hits	127	Target Neighborhood Hits	444	Shared Neighborhood Hits	61
SwissProt Accessions	Q9NQ69, Q5VUE3, Q9BYU6, Q9NQ70	Gene names	LHX9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

LHX9_MOUSE
θ value	θ > 10 (rank : 251)	NC score	0.063728 (rank : 161)
Query Neighborhood Hits	127	Target Neighborhood Hits	445	Shared Neighborhood Hits	61
SwissProt Accessions	Q9WUH2, Q9QYQ5, Q9QYQ6, Q9QZ00, Q9WU44	Gene names	Lhx9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

MSX1_HUMAN
θ value	θ > 10 (rank : 252)	NC score	0.051896 (rank : 247)
Query Neighborhood Hits	127	Target Neighborhood Hits	374	Shared Neighborhood Hits	55
SwissProt Accessions	P28360, Q96NY4	Gene names	MSX1, HOX7
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7).

MSX1_MOUSE
θ value	θ > 10 (rank : 253)	NC score	0.052181 (rank : 241)
Query Neighborhood Hits	127	Target Neighborhood Hits	322	Shared Neighborhood Hits	55
SwissProt Accessions	P13297	Gene names	Msx1, Hox7, Hox7.1
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7) (Hox- 7.1).

MSX2_HUMAN
θ value	θ > 10 (rank : 254)	NC score	0.056713 (rank : 210)
Query Neighborhood Hits	127	Target Neighborhood Hits	337	Shared Neighborhood Hits	57
SwissProt Accessions	P35548	Gene names	MSX2, HOX8
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8).

MSX2_MOUSE
θ value	θ > 10 (rank : 255)	NC score	0.055220 (rank : 220)
Query Neighborhood Hits	127	Target Neighborhood Hits	345	Shared Neighborhood Hits	58
SwissProt Accessions	Q03358, Q63856	Gene names	Msx2, Hox-8.1, Msx-2
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8.1).

NKX12_MOUSE
θ value	θ > 10 (rank : 256)	NC score	0.061591 (rank : 170)
Query Neighborhood Hits	127	Target Neighborhood Hits	332	Shared Neighborhood Hits	50
SwissProt Accessions	P42580, Q9JHF2, Q9JKW5, Q9JKW6, Q9JKW9, Q9JKX0, Q9JKX1	Gene names	Nkx1-2, Nkx1.1, Sax1
Domain Architecture
Description	NK1 transcription factor-related protein 2 (Homeobox protein SAX-1) (NKX-1.1).

NKX22_HUMAN
θ value	θ > 10 (rank : 257)	NC score	0.057328 (rank : 204)
Query Neighborhood Hits	127	Target Neighborhood Hits	342	Shared Neighborhood Hits	57
SwissProt Accessions	O95096	Gene names	NKX2-2, NKX2.2, NKX2B
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

NKX22_MOUSE
θ value	θ > 10 (rank : 258)	NC score	0.060301 (rank : 180)
Query Neighborhood Hits	127	Target Neighborhood Hits	336	Shared Neighborhood Hits	61
SwissProt Accessions	P42586	Gene names	Nkx2-2, Nkx-2.2, Nkx2b
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

NKX23_HUMAN
θ value	θ > 10 (rank : 259)	NC score	0.055724 (rank : 216)
Query Neighborhood Hits	127	Target Neighborhood Hits	346	Shared Neighborhood Hits	65
SwissProt Accessions	Q8TAU0, Q9NYS6	Gene names	NKX2-3, NKX23, NKX2C
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NKX-2.3) (Homeobox protein NK-2 homolog C).

NKX23_MOUSE
θ value	θ > 10 (rank : 260)	NC score	0.051942 (rank : 246)
Query Neighborhood Hits	127	Target Neighborhood Hits	340	Shared Neighborhood Hits	61
SwissProt Accessions	P97334, Q9QZ60, Q9WV67	Gene names	Nkx2-3, Nkx-2.3, Nkx2c
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NK-2 homolog C) (Nkx2-C) (Homeobox protein NK-2 homolog 3).

NKX25_HUMAN
θ value	θ > 10 (rank : 261)	NC score	0.064548 (rank : 156)
Query Neighborhood Hits	127	Target Neighborhood Hits	338	Shared Neighborhood Hits	63
SwissProt Accessions	P52952	Gene names	NKX2-5, CSX, NKX2.5, NKX2E
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

NKX25_MOUSE
θ value	θ > 10 (rank : 262)	NC score	0.058330 (rank : 196)
Query Neighborhood Hits	127	Target Neighborhood Hits	347	Shared Neighborhood Hits	61
SwissProt Accessions	P42582, P97335	Gene names	Nkx2-5, Csx, Nkx-2.5, Nkx2e
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

NKX26_MOUSE
θ value	θ > 10 (rank : 263)	NC score	0.055524 (rank : 218)
Query Neighborhood Hits	127	Target Neighborhood Hits	343	Shared Neighborhood Hits	54
SwissProt Accessions	P43688	Gene names	Nkx2-6, Nkx-2.6, Nkx2f
Domain Architecture
Description	Homeobox protein Nkx-2.6 (Homeobox protein NK-2 homolog F).

NKX28_HUMAN
θ value	θ > 10 (rank : 264)	NC score	0.076868 (rank : 86)
Query Neighborhood Hits	127	Target Neighborhood Hits	352	Shared Neighborhood Hits	72
SwissProt Accessions	O15522	Gene names	NKX2-8, NKX-2.8, NKX2G, NKX2H
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H).

NKX28_MOUSE
θ value	θ > 10 (rank : 265)	NC score	0.078635 (rank : 82)
Query Neighborhood Hits	127	Target Neighborhood Hits	347	Shared Neighborhood Hits	70
SwissProt Accessions	O70584	Gene names	Nkx2-8, Nkx-2.9, Nkx2-9, Nkx2h
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H) (Homeobox protein Nkx-2.9).

NKX32_HUMAN
θ value	θ > 10 (rank : 266)	NC score	0.051895 (rank : 248)
Query Neighborhood Hits	127	Target Neighborhood Hits	323	Shared Neighborhood Hits	55
SwissProt Accessions	P78367	Gene names	BAPX1, NKX3B
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

NKX32_MOUSE
θ value	θ > 10 (rank : 267)	NC score	0.051632 (rank : 252)
Query Neighborhood Hits	127	Target Neighborhood Hits	326	Shared Neighborhood Hits	55
SwissProt Accessions	P97503	Gene names	Bapx1, Nkx-3.2, Nkx3-2, Nkx3b
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

OTP_MOUSE
θ value	θ > 10 (rank : 268)	NC score	0.069077 (rank : 121)
Query Neighborhood Hits	127	Target Neighborhood Hits	387	Shared Neighborhood Hits	65
SwissProt Accessions	O09113	Gene names	Otp
Domain Architecture
Description	Homeobox protein orthopedia.

PAX3_HUMAN
θ value	θ > 10 (rank : 269)	NC score	0.061664 (rank : 169)
Query Neighborhood Hits	127	Target Neighborhood Hits	513	Shared Neighborhood Hits	68
SwissProt Accessions	P23760, Q16448	Gene names	PAX3, HUP2
Domain Architecture
Description	Paired box protein Pax-3 (HUP2).

PAX3_MOUSE
θ value	θ > 10 (rank : 270)	NC score	0.060384 (rank : 179)
Query Neighborhood Hits	127	Target Neighborhood Hits	478	Shared Neighborhood Hits	67
SwissProt Accessions	P24610, Q3UFQ9, Q8BRE7, Q9CXI6	Gene names	Pax3, Pax-3
Domain Architecture
Description	Paired box protein Pax-3.

PAX4_HUMAN
θ value	θ > 10 (rank : 271)	NC score	0.060061 (rank : 183)
Query Neighborhood Hits	127	Target Neighborhood Hits	367	Shared Neighborhood Hits	64
SwissProt Accessions	O43316, O95161, Q6B0H0	Gene names	PAX4
Domain Architecture
Description	Paired box protein Pax-4.

PAX4_MOUSE
θ value	θ > 10 (rank : 272)	NC score	0.057048 (rank : 205)
Query Neighborhood Hits	127	Target Neighborhood Hits	370	Shared Neighborhood Hits	62
SwissProt Accessions	P32115, P97341, Q9QUR1, Q9R091	Gene names	Pax4, Pax-4
Domain Architecture
Description	Paired box protein Pax-4.

PAX7_HUMAN
θ value	θ > 10 (rank : 273)	NC score	0.065362 (rank : 147)
Query Neighborhood Hits	127	Target Neighborhood Hits	456	Shared Neighborhood Hits	79
SwissProt Accessions	P23759	Gene names	PAX7, HUP1
Domain Architecture
Description	Paired box protein Pax-7 (HUP1).

PAX7_MOUSE
θ value	θ > 10 (rank : 274)	NC score	0.064884 (rank : 153)
Query Neighborhood Hits	127	Target Neighborhood Hits	422	Shared Neighborhood Hits	80
SwissProt Accessions	P47239, Q9ES16	Gene names	Pax7, Pax-7
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-7.

PEPP1_HUMAN
θ value	θ > 10 (rank : 275)	NC score	0.060425 (rank : 178)
Query Neighborhood Hits	127	Target Neighborhood Hits	338	Shared Neighborhood Hits	53
SwissProt Accessions	Q8NHV9, O95030, Q3SYE0	Gene names	PEPP1, OTEX
Domain Architecture
Description	Paired-like homeobox protein PEPP-1 (Ovary-, testis- and epididymis- expressed gene protein).

PHX2A_HUMAN
θ value	θ > 10 (rank : 276)	NC score	0.055151 (rank : 224)
Query Neighborhood Hits	127	Target Neighborhood Hits	345	Shared Neighborhood Hits	56
SwissProt Accessions	O14813, Q8IVZ2	Gene names	PHOX2A, ARIX, PMX2A
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (Aristaless homeobox protein homolog) (ARIX1 homeodomain protein).

PHX2A_MOUSE
θ value	θ > 10 (rank : 277)	NC score	0.055187 (rank : 222)
Query Neighborhood Hits	127	Target Neighborhood Hits	338	Shared Neighborhood Hits	56
SwissProt Accessions	Q62066	Gene names	Phox2a, Arix, Phox2, Pmx2, Pmx2a
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (PHOX2A homeodomain protein) (Aristaless homeobox protein homolog).

PHX2B_HUMAN
θ value	θ > 10 (rank : 278)	NC score	0.056850 (rank : 208)
Query Neighborhood Hits	127	Target Neighborhood Hits	407	Shared Neighborhood Hits	58
SwissProt Accessions	Q99453, Q6PJD9	Gene names	PHOX2B, PMX2B
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

PHX2B_MOUSE
θ value	θ > 10 (rank : 279)	NC score	0.056850 (rank : 209)
Query Neighborhood Hits	127	Target Neighborhood Hits	407	Shared Neighborhood Hits	58
SwissProt Accessions	O35690	Gene names	Phox2b, Pmx2b
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

PITX1_HUMAN
θ value	θ > 10 (rank : 280)	NC score	0.069864 (rank : 115)
Query Neighborhood Hits	127	Target Neighborhood Hits	353	Shared Neighborhood Hits	63
SwissProt Accessions	P78337, O14677, O60425, Q9BTI5	Gene names	PITX1, BFT, PTX1
Domain Architecture
Description	Pituitary homeobox 1 (Hindlimb expressed homeobox protein backfoot).

PITX1_MOUSE
θ value	θ > 10 (rank : 281)	NC score	0.074471 (rank : 97)
Query Neighborhood Hits	127	Target Neighborhood Hits	362	Shared Neighborhood Hits	67
SwissProt Accessions	P70314, O54742, P70427	Gene names	Pitx1, Bft, Potx, Ptx1
Domain Architecture
Description	Pituitary homeobox 1 (Homeobox protein P-OTX) (Pituitary OTX-related factor) (Hindlimb expressed homeobox protein backfoot) (Ptx1).

PITX2_HUMAN
θ value	θ > 10 (rank : 282)	NC score	0.086533 (rank : 68)
Query Neighborhood Hits	127	Target Neighborhood Hits	381	Shared Neighborhood Hits	71
SwissProt Accessions	Q99697, O60578, O60579, O60580, Q9BY17	Gene names	PITX2, ARP1, RGS, RIEG, RIEG1
Domain Architecture
Description	Pituitary homeobox 2 (RIEG bicoid-related homeobox transcription factor) (Solurshin) (ALL1-responsive protein ARP1).

PITX2_MOUSE
θ value	θ > 10 (rank : 283)	NC score	0.085942 (rank : 69)
Query Neighborhood Hits	127	Target Neighborhood Hits	383	Shared Neighborhood Hits	71
SwissProt Accessions	P97474, O08646, O70336, P97933, Q9JLA0, Q9QXB8, Q9R1V9, Q9Z141	Gene names	Pitx2, Arp1, Brx1, Otlx2, Ptx2, Rgs
Domain Architecture
Description	Pituitary homeobox 2 (Orthodenticle-like homeobox 2) (Solurshin) (ALL1-responsive protein ARP1) (BRX1 homeoprotein) (Paired-like homeodomain transcription factor Munc 30).

PITX3_HUMAN
θ value	θ > 10 (rank : 284)	NC score	0.090770 (rank : 66)
Query Neighborhood Hits	127	Target Neighborhood Hits	366	Shared Neighborhood Hits	72
SwissProt Accessions	O75364	Gene names	PITX3, PTX3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

PITX3_MOUSE
θ value	θ > 10 (rank : 285)	NC score	0.091399 (rank : 64)
Query Neighborhood Hits	127	Target Neighborhood Hits	380	Shared Neighborhood Hits	74
SwissProt Accessions	O35160	Gene names	Pitx3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

PO6F1_HUMAN
θ value	θ > 10 (rank : 286)	NC score	0.064730 (rank : 154)
Query Neighborhood Hits	127	Target Neighborhood Hits	370	Shared Neighborhood Hits	59
SwissProt Accessions	Q14863	Gene names	POU6F1, BRN5, MPOU, TCFB1
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (mPOU homeobox protein) (Brain-specific homeobox/POU domain protein 5) (Brain-5) (Brn-5 protein).

PO6F1_MOUSE
θ value	θ > 10 (rank : 287)	NC score	0.064185 (rank : 159)
Query Neighborhood Hits	127	Target Neighborhood Hits	581	Shared Neighborhood Hits	68
SwissProt Accessions	Q07916, Q91XK3	Gene names	Pou6f1, Emb
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (Octamer-binding transcription factor EMB) (Transcription regulatory protein MCP-1).

PROP1_HUMAN
θ value	θ > 10 (rank : 288)	NC score	0.066276 (rank : 140)
Query Neighborhood Hits	127	Target Neighborhood Hits	354	Shared Neighborhood Hits	66
SwissProt Accessions	O75360	Gene names	PROP1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

PROP1_MOUSE
θ value	θ > 10 (rank : 289)	NC score	0.065212 (rank : 151)
Query Neighborhood Hits	127	Target Neighborhood Hits	361	Shared Neighborhood Hits	64
SwissProt Accessions	P97458	Gene names	Prop1, Prop-1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

PRRX1_HUMAN
θ value	θ > 10 (rank : 290)	NC score	0.057471 (rank : 203)
Query Neighborhood Hits	127	Target Neighborhood Hits	347	Shared Neighborhood Hits	59
SwissProt Accessions	P54821, O60807	Gene names	PRRX1, PMX1
Domain Architecture
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein PHOX1).

PRRX1_MOUSE
θ value	θ > 10 (rank : 291)	NC score	0.056103 (rank : 214)
Query Neighborhood Hits	127	Target Neighborhood Hits	346	Shared Neighborhood Hits	57
SwissProt Accessions	P63013, P43271, Q02810	Gene names	Prrx1, Pmx, Pmx1
Domain Architecture	No domain graphic available
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein mHox) (Homeobox protein K-2).

PRRX2_HUMAN
θ value	θ > 10 (rank : 292)	NC score	0.055206 (rank : 221)
Query Neighborhood Hits	127	Target Neighborhood Hits	348	Shared Neighborhood Hits	57
SwissProt Accessions	Q99811, Q9UIB3	Gene names	PRRX2, PMX2, PRX2
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Paired-related homeobox protein 2).

PRRX2_MOUSE
θ value	θ > 10 (rank : 293)	NC score	0.056330 (rank : 213)
Query Neighborhood Hits	127	Target Neighborhood Hits	351	Shared Neighborhood Hits	57
SwissProt Accessions	Q06348, Q61651	Gene names	Prrx2, Prx2, S8
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Homeobox protein S8).

PRRXL_MOUSE
θ value	θ > 10 (rank : 294)	NC score	0.065480 (rank : 142)
Query Neighborhood Hits	127	Target Neighborhood Hits	350	Shared Neighborhood Hits	67
SwissProt Accessions	Q8BYH0, Q8K3F8	Gene names	Prrxl1, Drg11
Domain Architecture	No domain graphic available
Description	Paired-related homeobox protein-like 1 (Dorsal root ganglion 11) (Homeobox protein DRG11).

SHOX_HUMAN
θ value	θ > 10 (rank : 295)	NC score	0.054580 (rank : 226)
Query Neighborhood Hits	127	Target Neighborhood Hits	363	Shared Neighborhood Hits	56
SwissProt Accessions	O15266, O00412, O00413, O15267	Gene names	SHOX, PHOG
Domain Architecture
Description	Short stature homeobox protein (Short stature homeobox-containing protein) (Pseudoautosomal homeobox-containing osteogenic protein).

TITF1_HUMAN
θ value	θ > 10 (rank : 296)	NC score	0.072470 (rank : 105)
Query Neighborhood Hits	127	Target Neighborhood Hits	332	Shared Neighborhood Hits	55
SwissProt Accessions	P43699, O14954, O14955, Q9BRJ8	Gene names	TITF1, NKX2-1, NKX2A, TTF1
Domain Architecture
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1) (Homeobox protein NK-2 homolog A).

TITF1_MOUSE
θ value	θ > 10 (rank : 297)	NC score	0.070981 (rank : 109)
Query Neighborhood Hits	127	Target Neighborhood Hits	335	Shared Neighborhood Hits	55
SwissProt Accessions	P50220	Gene names	Titf1, Nkx-2.1, Nkx2-1, Ttf1
Domain Architecture	No domain graphic available
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1).

TLX1_MOUSE
θ value	θ > 10 (rank : 298)	NC score	0.052237 (rank : 239)
Query Neighborhood Hits	127	Target Neighborhood Hits	347	Shared Neighborhood Hits	57
SwissProt Accessions	P43345	Gene names	Tlx1, Hox11, Tlx-1
Domain Architecture
Description	T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (Homeobox TLX-1).

TLX2_HUMAN
θ value	θ > 10 (rank : 299)	NC score	0.054122 (rank : 229)
Query Neighborhood Hits	127	Target Neighborhood Hits	352	Shared Neighborhood Hits	57
SwissProt Accessions	O43763, Q9UQ48	Gene names	TLX2, HOX11L1, NCX
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Neural crest homeobox protein).

TLX2_MOUSE
θ value	θ > 10 (rank : 300)	NC score	0.054299 (rank : 228)
Query Neighborhood Hits	127	Target Neighborhood Hits	336	Shared Neighborhood Hits	57
SwissProt Accessions	Q61663	Gene names	Tlx2, Hox11l1, Tlx1l1
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Homeobox TLX-2) (PMUR10F).

TLX3_HUMAN
θ value	θ > 10 (rank : 301)	NC score	0.050995 (rank : 261)
Query Neighborhood Hits	127	Target Neighborhood Hits	403	Shared Neighborhood Hits	60
SwissProt Accessions	O43711, Q96AD3	Gene names	TLX3, HOX11L2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox protein Hox-11L2).

TLX3_MOUSE
θ value	θ > 10 (rank : 302)	NC score	0.059318 (rank : 192)
Query Neighborhood Hits	127	Target Neighborhood Hits	346	Shared Neighborhood Hits	61
SwissProt Accessions	O55144	Gene names	Tlx3, Hox11l2, Rnx, Tlx1l2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox TLX-3) (Homeobox protein Hox-11L2) (Respiratory neuron homeobox protein).

VAX1_HUMAN
θ value	θ > 10 (rank : 303)	NC score	0.052068 (rank : 244)
Query Neighborhood Hits	127	Target Neighborhood Hits	355	Shared Neighborhood Hits	53
SwissProt Accessions	Q5SQQ9, Q6ZSX0	Gene names	VAX1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

VAX1_MOUSE
θ value	θ > 10 (rank : 304)	NC score	0.052139 (rank : 243)
Query Neighborhood Hits	127	Target Neighborhood Hits	351	Shared Neighborhood Hits	53
SwissProt Accessions	Q2NKI2, O88880	Gene names	Vax1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

ZFHX2_HUMAN
θ value	θ > 10 (rank : 305)	NC score	0.052443 (rank : 238)
Query Neighborhood Hits	127	Target Neighborhood Hits	1178	Shared Neighborhood Hits	69
SwissProt Accessions	Q9C0A1	Gene names	ZFHX2, KIAA1762
Domain Architecture
Description	Zinc finger homeobox protein 2.

ZHX1_HUMAN
θ value	θ > 10 (rank : 306)	NC score	0.084657 (rank : 72)
Query Neighborhood Hits	127	Target Neighborhood Hits	307	Shared Neighborhood Hits	56
SwissProt Accessions	Q9UKY1, Q8IWD8	Gene names	ZHX1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

ZHX1_MOUSE
θ value	θ > 10 (rank : 307)	NC score	0.080891 (rank : 78)
Query Neighborhood Hits	127	Target Neighborhood Hits	334	Shared Neighborhood Hits	59
SwissProt Accessions	P70121, Q8BQ68, Q8C6T4, Q8CJG3	Gene names	Zhx1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

ZHX3_HUMAN
θ value	θ > 10 (rank : 308)	NC score	0.104928 (rank : 55)
Query Neighborhood Hits	127	Target Neighborhood Hits	331	Shared Neighborhood Hits	59
SwissProt Accessions	Q9H4I2, O43145	Gene names	ZHX3, KIAA0395, TIX1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

ZHX3_MOUSE
θ value	θ > 10 (rank : 309)	NC score	0.124455 (rank : 54)
Query Neighborhood Hits	127	Target Neighborhood Hits	321	Shared Neighborhood Hits	61
SwissProt Accessions	Q8C0Q2, Q80U14	Gene names	Zhx3, Kiaa0395, Tix1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

Hits sorted by NC score

TGIF2_MOUSE
NC score	0.999962 (rank : 1)	θ value	8.09639e-134 (rank : 1)
Query Neighborhood Hits	127	Target Neighborhood Hits	127	Shared Neighborhood Hits	127
SwissProt Accessions	Q8C0Y1	Gene names	Tgif2
Domain Architecture	No domain graphic available
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

TGIF2_HUMAN
NC score	0.991407 (rank : 2)	θ value	8.11517e-126 (rank : 2)
Query Neighborhood Hits	127	Target Neighborhood Hits	94	Shared Neighborhood Hits	86
SwissProt Accessions	Q9GZN2	Gene names	TGIF2
Domain Architecture
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

TGIF_MOUSE
NC score	0.949682 (rank : 3)	θ value	2.25659e-51 (rank : 3)
Query Neighborhood Hits	127	Target Neighborhood Hits	125	Shared Neighborhood Hits	69
SwissProt Accessions	P70284, Q921F9, Q99JS3	Gene names	Tgif
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

TGIF_HUMAN
NC score	0.944705 (rank : 4)	θ value	4.25575e-50 (rank : 4)
Query Neighborhood Hits	127	Target Neighborhood Hits	109	Shared Neighborhood Hits	67
SwissProt Accessions	Q15583, Q6ICR0, Q8N5X9, Q9NRS0	Gene names	TGIF
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

TF2LX_HUMAN
NC score	0.926818 (rank : 5)	θ value	2.19075e-38 (rank : 5)
Query Neighborhood Hits	127	Target Neighborhood Hits	108	Shared Neighborhood Hits	69
SwissProt Accessions	Q8IUE1	Gene names	TGIF2LX, TGIFLX
Domain Architecture
Description	Homeobox protein TGIF2LX (TGFB-induced factor 2-like protein, X- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the X).

TF2LY_HUMAN
NC score	0.913959 (rank : 6)	θ value	2.77775e-25 (rank : 6)
Query Neighborhood Hits	127	Target Neighborhood Hits	90	Shared Neighborhood Hits	67
SwissProt Accessions	Q8IUE0	Gene names	TGIF2LY, TGIFLY
Domain Architecture
Description	Homeobox protein TGIF2LY (TGFB-induced factor 2-like protein, Y- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the Y).

PKNX2_HUMAN
NC score	0.764913 (rank : 7)	θ value	4.44505e-15 (rank : 7)
Query Neighborhood Hits	127	Target Neighborhood Hits	133	Shared Neighborhood Hits	66
SwissProt Accessions	Q96KN3, Q63HL6, Q86XD1	Gene names	PKNOX2, PREP2
Domain Architecture
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

PKNX1_MOUSE
NC score	0.760419 (rank : 8)	θ value	3.76295e-14 (rank : 11)
Query Neighborhood Hits	127	Target Neighborhood Hits	103	Shared Neighborhood Hits	62
SwissProt Accessions	O70477	Gene names	Pknox1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1).

PKNX1_HUMAN
NC score	0.758412 (rank : 9)	θ value	6.41864e-14 (rank : 12)
Query Neighborhood Hits	127	Target Neighborhood Hits	101	Shared Neighborhood Hits	62
SwissProt Accessions	P55347, O00528, Q8IWT7	Gene names	PKNOX1, PREP1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox protein PREP-1).

PKNX2_MOUSE
NC score	0.758194 (rank : 10)	θ value	4.44505e-15 (rank : 8)
Query Neighborhood Hits	127	Target Neighborhood Hits	197	Shared Neighborhood Hits	69
SwissProt Accessions	Q8BG99, Q8R4B0	Gene names	Pknox2, Prep2
Domain Architecture	No domain graphic available
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

MEIS3_MOUSE
NC score	0.751491 (rank : 11)	θ value	1.68911e-14 (rank : 10)
Query Neighborhood Hits	127	Target Neighborhood Hits	118	Shared Neighborhood Hits	57
SwissProt Accessions	P97368, Q99L81	Gene names	Meis3, Mrg2
Domain Architecture
Description	Homeobox protein Meis3 (Meis1-related protein 2).

MEIS3_HUMAN
NC score	0.748908 (rank : 12)	θ value	1.68911e-14 (rank : 9)
Query Neighborhood Hits	127	Target Neighborhood Hits	118	Shared Neighborhood Hits	57
SwissProt Accessions	Q99687, Q6NT73, Q8TC66, Q9NPW2	Gene names	MEIS3, MRG2
Domain Architecture	No domain graphic available
Description	Homeobox protein Meis3 (Meis1-related protein 2).

MEIS1_MOUSE
NC score	0.731549 (rank : 13)	θ value	7.09661e-13 (rank : 14)
Query Neighborhood Hits	127	Target Neighborhood Hits	115	Shared Neighborhood Hits	59
SwissProt Accessions	Q60954, Q5SVC8, Q60955, Q8CIL0	Gene names	Meis1
Domain Architecture
Description	Homeobox protein Meis1 (Myeloid ecotropic viral integration site 1).

MEIS1_HUMAN
NC score	0.731539 (rank : 14)	θ value	7.09661e-13 (rank : 13)
Query Neighborhood Hits	127	Target Neighborhood Hits	115	Shared Neighborhood Hits	59
SwissProt Accessions	O00470	Gene names	MEIS1
Domain Architecture
Description	Homeobox protein Meis1.

MEIS2_HUMAN
NC score	0.716705 (rank : 15)	θ value	1.2105e-12 (rank : 15)
Query Neighborhood Hits	127	Target Neighborhood Hits	182	Shared Neighborhood Hits	59
SwissProt Accessions	O14770, Q96KI4, Q96KI5, Q9NRS1, Q9NRS2, Q9NRS3	Gene names	MEIS2, MRG1
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

MEIS2_MOUSE
NC score	0.714101 (rank : 16)	θ value	1.2105e-12 (rank : 16)
Query Neighborhood Hits	127	Target Neighborhood Hits	208	Shared Neighborhood Hits	59
SwissProt Accessions	P97367, O35676, O35677, P97403, P97404	Gene names	Meis2, Mrg1, Stra10
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

IRX6_MOUSE
NC score	0.617838 (rank : 17)	θ value	1.38499e-08 (rank : 17)
Query Neighborhood Hits	127	Target Neighborhood Hits	256	Shared Neighborhood Hits	73
SwissProt Accessions	Q9ER75	Gene names	Irx6, Irxb3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

IRX6_HUMAN
NC score	0.617011 (rank : 18)	θ value	5.26297e-08 (rank : 18)
Query Neighborhood Hits	127	Target Neighborhood Hits	262	Shared Neighborhood Hits	73
SwissProt Accessions	P78412, Q7Z2K0	Gene names	IRX6, IRX7, IRXB3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

IRX4_HUMAN
NC score	0.614797 (rank : 19)	θ value	1.17247e-07 (rank : 20)
Query Neighborhood Hits	127	Target Neighborhood Hits	276	Shared Neighborhood Hits	73
SwissProt Accessions	P78413, Q9UHR2	Gene names	IRX4, IRXA3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

IRX1_MOUSE
NC score	0.614225 (rank : 20)	θ value	3.41135e-07 (rank : 26)
Query Neighborhood Hits	127	Target Neighborhood Hits	269	Shared Neighborhood Hits	70
SwissProt Accessions	P81068, O55120, Q9JLL6	Gene names	Irx1, Irxa1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX1_HUMAN
NC score	0.614218 (rank : 21)	θ value	1.99992e-07 (rank : 22)
Query Neighborhood Hits	127	Target Neighborhood Hits	285	Shared Neighborhood Hits	69
SwissProt Accessions	P78414, Q7Z2F8, Q8N312	Gene names	IRX1, IRXA1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX3_MOUSE
NC score	0.611829 (rank : 22)	θ value	1.99992e-07 (rank : 24)
Query Neighborhood Hits	127	Target Neighborhood Hits	303	Shared Neighborhood Hits	71
SwissProt Accessions	P81067	Gene names	Irx3, Irxb1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX3_HUMAN
NC score	0.611250 (rank : 23)	θ value	1.99992e-07 (rank : 23)
Query Neighborhood Hits	127	Target Neighborhood Hits	342	Shared Neighborhood Hits	73
SwissProt Accessions	P78415, Q7Z4A4, Q7Z4A5, Q8IVC6	Gene names	IRX3, IRXB1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX4_MOUSE
NC score	0.610646 (rank : 24)	θ value	1.17247e-07 (rank : 21)
Query Neighborhood Hits	127	Target Neighborhood Hits	286	Shared Neighborhood Hits	73
SwissProt Accessions	Q9QY61	Gene names	Irx4, Irxa3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

IRX2_MOUSE
NC score	0.594747 (rank : 25)	θ value	2.61198e-07 (rank : 25)
Query Neighborhood Hits	127	Target Neighborhood Hits	264	Shared Neighborhood Hits	68
SwissProt Accessions	P81066, O55121, Q9ERN1	Gene names	Irx2, Irxa2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

IRX5_HUMAN
NC score	0.587234 (rank : 26)	θ value	1.69304e-06 (rank : 34)
Query Neighborhood Hits	127	Target Neighborhood Hits	362	Shared Neighborhood Hits	75
SwissProt Accessions	P78411, P78416, Q7Z2E1	Gene names	IRX5, IRX2A, IRXB2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2) (IRX-2A).

IRX5_MOUSE
NC score	0.584480 (rank : 27)	θ value	1.69304e-06 (rank : 35)
Query Neighborhood Hits	127	Target Neighborhood Hits	324	Shared Neighborhood Hits	75
SwissProt Accessions	Q9JKQ4, Q80WV4, Q9JLL5	Gene names	Irx5, Irxb2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2).

IRX2_HUMAN
NC score	0.579317 (rank : 28)	θ value	9.92553e-07 (rank : 29)
Query Neighborhood Hits	127	Target Neighborhood Hits	358	Shared Neighborhood Hits	71
SwissProt Accessions	Q9BZI1, Q7Z2I7	Gene names	IRX2, IRXA2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

PBX4_MOUSE
NC score	0.558961 (rank : 29)	θ value	6.87365e-08 (rank : 19)
Query Neighborhood Hits	127	Target Neighborhood Hits	324	Shared Neighborhood Hits	79
SwissProt Accessions	Q99NE9, Q8CFL2, Q99NE8	Gene names	Pbx4
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4).

PBX2_MOUSE
NC score	0.535452 (rank : 30)	θ value	1.29631e-06 (rank : 33)
Query Neighborhood Hits	127	Target Neighborhood Hits	341	Shared Neighborhood Hits	78
SwissProt Accessions	O35984	Gene names	Pbx2
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2).

PBX2_HUMAN
NC score	0.534972 (rank : 31)	θ value	1.29631e-06 (rank : 32)
Query Neighborhood Hits	127	Target Neighborhood Hits	350	Shared Neighborhood Hits	78
SwissProt Accessions	P40425	Gene names	PBX2, G17
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2) (Protein G17).

PBX1_HUMAN
NC score	0.534027 (rank : 32)	θ value	1.29631e-06 (rank : 30)
Query Neighborhood Hits	127	Target Neighborhood Hits	317	Shared Neighborhood Hits	78
SwissProt Accessions	P40424	Gene names	PBX1, PRL
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1) (Homeobox protein PRL).

PBX1_MOUSE
NC score	0.534027 (rank : 33)	θ value	1.29631e-06 (rank : 31)
Query Neighborhood Hits	127	Target Neighborhood Hits	317	Shared Neighborhood Hits	78
SwissProt Accessions	P41778	Gene names	Pbx1, Pbx-1
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1).

PBX3_MOUSE
NC score	0.533154 (rank : 34)	θ value	7.59969e-07 (rank : 28)
Query Neighborhood Hits	127	Target Neighborhood Hits	306	Shared Neighborhood Hits	74
SwissProt Accessions	O35317, Q925W2	Gene names	Pbx3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PBX3_HUMAN
NC score	0.533123 (rank : 35)	θ value	7.59969e-07 (rank : 27)
Query Neighborhood Hits	127	Target Neighborhood Hits	306	Shared Neighborhood Hits	74
SwissProt Accessions	P40426, Q96PF9, Q96PG0	Gene names	PBX3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

SIX2_MOUSE
NC score	0.430833 (rank : 36)	θ value	5.44631e-05 (rank : 36)
Query Neighborhood Hits	127	Target Neighborhood Hits	376	Shared Neighborhood Hits	87
SwissProt Accessions	Q62232, P70179	Gene names	Six2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

SIX2_HUMAN
NC score	0.427898 (rank : 37)	θ value	0.000121331 (rank : 37)
Query Neighborhood Hits	127	Target Neighborhood Hits	345	Shared Neighborhood Hits	85
SwissProt Accessions	Q9NPC8, Q9BXH7	Gene names	SIX2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

SIX1_MOUSE
NC score	0.418263 (rank : 38)	θ value	0.000786445 (rank : 39)
Query Neighborhood Hits	127	Target Neighborhood Hits	341	Shared Neighborhood Hits	81
SwissProt Accessions	Q62231, Q8CIL7	Gene names	Six1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX1_HUMAN
NC score	0.418078 (rank : 39)	θ value	0.000786445 (rank : 38)
Query Neighborhood Hits	127	Target Neighborhood Hits	343	Shared Neighborhood Hits	81
SwissProt Accessions	Q15475, Q96H64	Gene names	SIX1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX4_MOUSE
NC score	0.368426 (rank : 40)	θ value	0.00869519 (rank : 45)
Query Neighborhood Hits	127	Target Neighborhood Hits	341	Shared Neighborhood Hits	73
SwissProt Accessions	Q61321, Q61322, Q61323	Gene names	Six4, Arec3
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4) (Skeletal muscle-specific ARE-binding protein AREC3).

SIX4_HUMAN
NC score	0.367820 (rank : 41)	θ value	0.00869519 (rank : 44)
Query Neighborhood Hits	127	Target Neighborhood Hits	342	Shared Neighborhood Hits	73
SwissProt Accessions	Q9UIU6	Gene names	SIX4
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4).

SIX6_MOUSE
NC score	0.367290 (rank : 42)	θ value	0.0431538 (rank : 48)
Query Neighborhood Hits	127	Target Neighborhood Hits	267	Shared Neighborhood Hits	72
SwissProt Accessions	Q9QZ28, O88423	Gene names	Six6, Optx2, Six9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Six9 protein).

SIX5_HUMAN
NC score	0.366866 (rank : 43)	θ value	0.00509761 (rank : 41)
Query Neighborhood Hits	127	Target Neighborhood Hits	386	Shared Neighborhood Hits	70
SwissProt Accessions	Q8N196	Gene names	SIX5, DMAHP
Domain Architecture	No domain graphic available
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein).

SIX6_HUMAN
NC score	0.365354 (rank : 44)	θ value	0.163984 (rank : 52)
Query Neighborhood Hits	127	Target Neighborhood Hits	269	Shared Neighborhood Hits	71
SwissProt Accessions	O95475, Q9P1X8	Gene names	SIX6, OPTX2, SIX9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Homeodomain protein OPTX2).

SIX3_HUMAN
NC score	0.361700 (rank : 45)	θ value	0.279714 (rank : 58)
Query Neighborhood Hits	127	Target Neighborhood Hits	285	Shared Neighborhood Hits	71
SwissProt Accessions	O95343	Gene names	SIX3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SIX3_MOUSE
NC score	0.361650 (rank : 46)	θ value	0.279714 (rank : 59)
Query Neighborhood Hits	127	Target Neighborhood Hits	289	Shared Neighborhood Hits	71
SwissProt Accessions	Q62233, P70176, P70177	Gene names	Six3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SIX5_MOUSE
NC score	0.359262 (rank : 47)	θ value	0.00665767 (rank : 43)
Query Neighborhood Hits	127	Target Neighborhood Hits	354	Shared Neighborhood Hits	69
SwissProt Accessions	P70178	Gene names	Six5, Dmahp
Domain Architecture
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein homolog).

HNF6_HUMAN
NC score	0.198102 (rank : 48)	θ value	0.0736092 (rank : 49)
Query Neighborhood Hits	127	Target Neighborhood Hits	127	Shared Neighborhood Hits	42
SwissProt Accessions	Q9UBC0, Q99744, Q9UMR6	Gene names	ONECUT1, HNF6, HNF6A
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

ONEC2_HUMAN
NC score	0.196247 (rank : 49)	θ value	0.279714 (rank : 54)
Query Neighborhood Hits	127	Target Neighborhood Hits	115	Shared Neighborhood Hits	41
SwissProt Accessions	O95948	Gene names	ONECUT2
Domain Architecture
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

HNF6_MOUSE
NC score	0.194953 (rank : 50)	θ value	0.0736092 (rank : 50)
Query Neighborhood Hits	127	Target Neighborhood Hits	124	Shared Neighborhood Hits	42
SwissProt Accessions	O08755	Gene names	Onecut1, Hnf6, Hnf6a
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

ONEC2_MOUSE
NC score	0.194253 (rank : 51)	θ value	0.279714 (rank : 55)
Query Neighborhood Hits	127	Target Neighborhood Hits	123	Shared Neighborhood Hits	40
SwissProt Accessions	Q6XBJ3	Gene names	Onecut2, Oc2
Domain Architecture	No domain graphic available
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

CUTL2_MOUSE
NC score	0.175928 (rank : 52)	θ value	0.0431538 (rank : 47)
Query Neighborhood Hits	127	Target Neighborhood Hits	771	Shared Neighborhood Hits	57
SwissProt Accessions	P70298	Gene names	Cutl2
Domain Architecture
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

CUTL2_HUMAN
NC score	0.162708 (rank : 53)	θ value	0.0330416 (rank : 46)
Query Neighborhood Hits	127	Target Neighborhood Hits	906	Shared Neighborhood Hits	63
SwissProt Accessions	O14529	Gene names	CUTL2, KIAA0293
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

ZHX3_MOUSE
NC score	0.124455 (rank : 54)	θ value	θ > 10 (rank : 309)
Query Neighborhood Hits	127	Target Neighborhood Hits	321	Shared Neighborhood Hits	61
SwissProt Accessions	Q8C0Q2, Q80U14	Gene names	Zhx3, Kiaa0395, Tix1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

ZHX3_HUMAN
NC score	0.104928 (rank : 55)	θ value	θ > 10 (rank : 308)
Query Neighborhood Hits	127	Target Neighborhood Hits	331	Shared Neighborhood Hits	59
SwissProt Accessions	Q9H4I2, O43145	Gene names	ZHX3, KIAA0395, TIX1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

HXD10_MOUSE
NC score	0.097372 (rank : 56)	θ value	0.365318 (rank : 61)
Query Neighborhood Hits	127	Target Neighborhood Hits	392	Shared Neighborhood Hits	64
SwissProt Accessions	P28359, Q91WU9	Gene names	Hoxd10, Hox-4.5, Hoxd-10
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4.5) (Hox-5.3).

ZHX2_HUMAN
NC score	0.097247 (rank : 57)	θ value	1.38821 (rank : 73)
Query Neighborhood Hits	127	Target Neighborhood Hits	347	Shared Neighborhood Hits	44
SwissProt Accessions	Q9Y6X8	Gene names	ZHX2, AFR1, KIAA0854, RAF
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

ZHX2_MOUSE
NC score	0.096716 (rank : 58)	θ value	1.81305 (rank : 80)
Query Neighborhood Hits	127	Target Neighborhood Hits	435	Shared Neighborhood Hits	45
SwissProt Accessions	Q8C0C0	Gene names	Zhx2, Afr1, Raf
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

HXD10_HUMAN
NC score	0.096664 (rank : 59)	θ value	0.365318 (rank : 60)
Query Neighborhood Hits	127	Target Neighborhood Hits	392	Shared Neighborhood Hits	64
SwissProt Accessions	P28358	Gene names	HOXD10, HOX4D
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4D) (Hox-4E).

HXC10_MOUSE
NC score	0.093104 (rank : 60)	θ value	1.81305 (rank : 75)
Query Neighborhood Hits	127	Target Neighborhood Hits	417	Shared Neighborhood Hits	66
SwissProt Accessions	P31257, P31312, Q7TMT7	Gene names	Hoxc10, Hox-3.6, Hoxc-10
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C10 (Hox-3.6).

HXC10_HUMAN
NC score	0.091727 (rank : 61)	θ value	1.81305 (rank : 74)
Query Neighborhood Hits	127	Target Neighborhood Hits	417	Shared Neighborhood Hits	66
SwissProt Accessions	Q9NYD6, O15219, O15220, Q9BVD5	Gene names	HOXC10
Domain Architecture
Description	Homeobox protein Hox-C10.

LBX1_MOUSE
NC score	0.091682 (rank : 62)	θ value	θ > 10 (rank : 246)
Query Neighborhood Hits	127	Target Neighborhood Hits	349	Shared Neighborhood Hits	70
SwissProt Accessions	P52955	Gene names	Lbx1, Lbx1h
Domain Architecture
Description	Transcription factor LBX1.

LBX1_HUMAN
NC score	0.091539 (rank : 63)	θ value	θ > 10 (rank : 245)
Query Neighborhood Hits	127	Target Neighborhood Hits	357	Shared Neighborhood Hits	73
SwissProt Accessions	P52954	Gene names	LBX1
Domain Architecture
Description	Transcription factor LBX1.

PITX3_MOUSE
NC score	0.091399 (rank : 64)	θ value	θ > 10 (rank : 285)
Query Neighborhood Hits	127	Target Neighborhood Hits	380	Shared Neighborhood Hits	74
SwissProt Accessions	O35160	Gene names	Pitx3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

BSH_MOUSE
NC score	0.091387 (rank : 65)	θ value	θ > 10 (rank : 137)
Query Neighborhood Hits	127	Target Neighborhood Hits	349	Shared Neighborhood Hits	67
SwissProt Accessions	Q810B3	Gene names	Bsx
Domain Architecture	No domain graphic available
Description	Brain-specific homeobox protein homolog.

PITX3_HUMAN
NC score	0.090770 (rank : 66)	θ value	θ > 10 (rank : 284)
Query Neighborhood Hits	127	Target Neighborhood Hits	366	Shared Neighborhood Hits	72
SwissProt Accessions	O75364	Gene names	PITX3, PTX3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

NKX61_MOUSE
NC score	0.089678 (rank : 67)	θ value	0.365318 (rank : 62)
Query Neighborhood Hits	127	Target Neighborhood Hits	439	Shared Neighborhood Hits	66
SwissProt Accessions	Q99MA9, Q9ERQ7	Gene names	Nkx6-1, Nkx6.1, Nkx6a
Domain Architecture
Description	Homeobox protein Nkx-6.1.

PITX2_HUMAN
NC score	0.086533 (rank : 68)	θ value	θ > 10 (rank : 282)
Query Neighborhood Hits	127	Target Neighborhood Hits	381	Shared Neighborhood Hits	71
SwissProt Accessions	Q99697, O60578, O60579, O60580, Q9BY17	Gene names	PITX2, ARP1, RGS, RIEG, RIEG1
Domain Architecture
Description	Pituitary homeobox 2 (RIEG bicoid-related homeobox transcription factor) (Solurshin) (ALL1-responsive protein ARP1).

PITX2_MOUSE
NC score	0.085942 (rank : 69)	θ value	θ > 10 (rank : 283)
Query Neighborhood Hits	127	Target Neighborhood Hits	383	Shared Neighborhood Hits	71
SwissProt Accessions	P97474, O08646, O70336, P97933, Q9JLA0, Q9QXB8, Q9R1V9, Q9Z141	Gene names	Pitx2, Arp1, Brx1, Otlx2, Ptx2, Rgs
Domain Architecture
Description	Pituitary homeobox 2 (Orthodenticle-like homeobox 2) (Solurshin) (ALL1-responsive protein ARP1) (BRX1 homeoprotein) (Paired-like homeodomain transcription factor Munc 30).

NKX24_HUMAN
NC score	0.085380 (rank : 70)	θ value	0.00665767 (rank : 42)
Query Neighborhood Hits	127	Target Neighborhood Hits	366	Shared Neighborhood Hits	58
SwissProt Accessions	Q9H2Z4	Gene names	NKX2-4, NKX2D
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

NKX61_HUMAN
NC score	0.085305 (rank : 71)	θ value	0.62314 (rank : 65)
Query Neighborhood Hits	127	Target Neighborhood Hits	431	Shared Neighborhood Hits	65
SwissProt Accessions	P78426	Gene names	NKX6-1, NKX6A
Domain Architecture
Description	Homeobox protein Nkx-6.1.

ZHX1_HUMAN
NC score	0.084657 (rank : 72)	θ value	θ > 10 (rank : 306)
Query Neighborhood Hits	127	Target Neighborhood Hits	307	Shared Neighborhood Hits	56
SwissProt Accessions	Q9UKY1, Q8IWD8	Gene names	ZHX1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

HXC8_MOUSE
NC score	0.082647 (rank : 73)	θ value	θ > 10 (rank : 227)
Query Neighborhood Hits	127	Target Neighborhood Hits	327	Shared Neighborhood Hits	58
SwissProt Accessions	P09025	Gene names	Hoxc8, Hox-3.1, Hoxc-8
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3.1) (M31).

HXC8_HUMAN
NC score	0.082644 (rank : 74)	θ value	θ > 10 (rank : 226)
Query Neighborhood Hits	127	Target Neighborhood Hits	327	Shared Neighborhood Hits	58
SwissProt Accessions	P31273, O15221, O15362	Gene names	HOXC8, HOX3A
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3A).

HXB8_HUMAN
NC score	0.081205 (rank : 75)	θ value	θ > 10 (rank : 215)
Query Neighborhood Hits	127	Target Neighborhood Hits	324	Shared Neighborhood Hits	53
SwissProt Accessions	P17481, Q9H1I2	Gene names	HOXB8, HOX2D
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2D) (Hox-2.4).

DLX6_HUMAN
NC score	0.081072 (rank : 76)	θ value	θ > 10 (rank : 156)
Query Neighborhood Hits	127	Target Neighborhood Hits	341	Shared Neighborhood Hits	73
SwissProt Accessions	P56179, Q3ZAR6, Q9UPL2	Gene names	DLX6
Domain Architecture
Description	Homeobox protein DLX-6.

HXB8_MOUSE
NC score	0.080894 (rank : 77)	θ value	θ > 10 (rank : 216)
Query Neighborhood Hits	127	Target Neighborhood Hits	325	Shared Neighborhood Hits	54
SwissProt Accessions	P09632	Gene names	Hoxb8, Hox-2.4, Hoxb-8
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2.4).

ZHX1_MOUSE
NC score	0.080891 (rank : 78)	θ value	θ > 10 (rank : 307)
Query Neighborhood Hits	127	Target Neighborhood Hits	334	Shared Neighborhood Hits	59
SwissProt Accessions	P70121, Q8BQ68, Q8C6T4, Q8CJG3	Gene names	Zhx1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

HXD8_MOUSE
NC score	0.080549 (rank : 79)	θ value	θ > 10 (rank : 239)
Query Neighborhood Hits	127	Target Neighborhood Hits	333	Shared Neighborhood Hits	54
SwissProt Accessions	P23463	Gene names	Hoxd8, Hox-4.3, Hoxd-8
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4).

HXD8_HUMAN
NC score	0.080056 (rank : 80)	θ value	θ > 10 (rank : 238)
Query Neighborhood Hits	127	Target Neighborhood Hits	338	Shared Neighborhood Hits	54
SwissProt Accessions	P13378	Gene names	HOXD8, HOX4E
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4).

HXA10_HUMAN
NC score	0.079141 (rank : 81)	θ value	4.03905 (rank : 94)
Query Neighborhood Hits	127	Target Neighborhood Hits	334	Shared Neighborhood Hits	59
SwissProt Accessions	P31260, O43370, O43605, Q15949	Gene names	HOXA10, HOX1H
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1H) (Hox-1.8) (PL).

NKX28_MOUSE
NC score	0.078635 (rank : 82)	θ value	θ > 10 (rank : 265)
Query Neighborhood Hits	127	Target Neighborhood Hits	347	Shared Neighborhood Hits	70
SwissProt Accessions	O70584	Gene names	Nkx2-8, Nkx-2.9, Nkx2-9, Nkx2h
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H) (Homeobox protein Nkx-2.9).

HXD11_HUMAN
NC score	0.078280 (rank : 83)	θ value	5.27518 (rank : 103)
Query Neighborhood Hits	127	Target Neighborhood Hits	353	Shared Neighborhood Hits	60
SwissProt Accessions	P31277, Q9NS02	Gene names	HOXD11, HOX4F
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4F).

HXA10_MOUSE
NC score	0.077900 (rank : 84)	θ value	4.03905 (rank : 95)
Query Neighborhood Hits	127	Target Neighborhood Hits	365	Shared Neighborhood Hits	59
SwissProt Accessions	P31310, Q80Y22	Gene names	Hoxa10, Hox-1.8, Hoxa-10
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1.8).

PO6F2_MOUSE
NC score	0.076961 (rank : 85)	θ value	5.27518 (rank : 111)
Query Neighborhood Hits	127	Target Neighborhood Hits	639	Shared Neighborhood Hits	58
SwissProt Accessions	Q8BJI4	Gene names	Pou6f2
Domain Architecture	No domain graphic available
Description	POU domain, class 6, transcription factor 2.

NKX28_HUMAN
NC score	0.076868 (rank : 86)	θ value	θ > 10 (rank : 264)
Query Neighborhood Hits	127	Target Neighborhood Hits	352	Shared Neighborhood Hits	72
SwissProt Accessions	O15522	Gene names	NKX2-8, NKX-2.8, NKX2G, NKX2H
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H).

HXA7_MOUSE
NC score	0.076225 (rank : 87)	θ value	θ > 10 (rank : 200)
Query Neighborhood Hits	127	Target Neighborhood Hits	318	Shared Neighborhood Hits	54
SwissProt Accessions	P02830, Q544P0	Gene names	Hoxa7, Hox-1.1, Hoxa-7
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1.1) (M6-12) (M6).

EMX2_MOUSE
NC score	0.076025 (rank : 88)	θ value	θ > 10 (rank : 162)
Query Neighborhood Hits	127	Target Neighborhood Hits	340	Shared Neighborhood Hits	64
SwissProt Accessions	Q04744, Q80UE7	Gene names	Emx2, Emx-2
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

EMX2_HUMAN
NC score	0.075520 (rank : 89)	θ value	θ > 10 (rank : 161)
Query Neighborhood Hits	127	Target Neighborhood Hits	341	Shared Neighborhood Hits	63
SwissProt Accessions	Q04743, Q96NN8, Q9BQF4	Gene names	EMX2
Domain Architecture
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

DLX1_MOUSE
NC score	0.075507 (rank : 90)	θ value	θ > 10 (rank : 147)
Query Neighborhood Hits	127	Target Neighborhood Hits	343	Shared Neighborhood Hits	69
SwissProt Accessions	Q64317	Gene names	Dlx1
Domain Architecture
Description	Homeobox protein DLX-1.

DLX1_HUMAN
NC score	0.075502 (rank : 91)	θ value	θ > 10 (rank : 146)
Query Neighborhood Hits	127	Target Neighborhood Hits	343	Shared Neighborhood Hits	69
SwissProt Accessions	P56177, Q53ZU4, Q8IYB2	Gene names	DLX1
Domain Architecture
Description	Homeobox protein DLX-1.

PO6F2_HUMAN
NC score	0.075493 (rank : 92)	θ value	5.27518 (rank : 110)
Query Neighborhood Hits	127	Target Neighborhood Hits	618	Shared Neighborhood Hits	59
SwissProt Accessions	P78424, P78425, Q75ME8, Q86UM6, Q9UDS7	Gene names	POU6F2, RPF1
Domain Architecture
Description	POU domain, class 6, transcription factor 2 (Retina-derived POU-domain factor 1) (RPF-1).

ALX3_HUMAN
NC score	0.075106 (rank : 93)	θ value	θ > 10 (rank : 128)
Query Neighborhood Hits	127	Target Neighborhood Hits	380	Shared Neighborhood Hits	68
SwissProt Accessions	O95076, O95075	Gene names	ALX3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

CUTL1_MOUSE
NC score	0.075098 (rank : 94)	θ value	8.99809 (rank : 120)
Query Neighborhood Hits	127	Target Neighborhood Hits	1620	Shared Neighborhood Hits	72
SwissProt Accessions	P53564, O08994, P70301, Q571L6, Q91ZD2	Gene names	Cutl1, Cux, Cux1, Kiaa4047
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein Cux).

ALX3_MOUSE
NC score	0.074978 (rank : 95)	θ value	θ > 10 (rank : 129)
Query Neighborhood Hits	127	Target Neighborhood Hits	386	Shared Neighborhood Hits	68
SwissProt Accessions	O70137	Gene names	Alx3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

NKX24_MOUSE
NC score	0.074757 (rank : 96)	θ value	0.00390308 (rank : 40)
Query Neighborhood Hits	127	Target Neighborhood Hits	356	Shared Neighborhood Hits	56
SwissProt Accessions	Q9EQM3, Q9EQM4	Gene names	Nkx2-4, Nkx2d
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

PITX1_MOUSE
NC score	0.074471 (rank : 97)	θ value	θ > 10 (rank : 281)
Query Neighborhood Hits	127	Target Neighborhood Hits	362	Shared Neighborhood Hits	67
SwissProt Accessions	P70314, O54742, P70427	Gene names	Pitx1, Bft, Potx, Ptx1
Domain Architecture
Description	Pituitary homeobox 1 (Homeobox protein P-OTX) (Pituitary OTX-related factor) (Hindlimb expressed homeobox protein backfoot) (Ptx1).

DLX5_MOUSE
NC score	0.074224 (rank : 98)	θ value	θ > 10 (rank : 155)
Query Neighborhood Hits	127	Target Neighborhood Hits	434	Shared Neighborhood Hits	69
SwissProt Accessions	P70396, O54876, O54877, O54878, Q9JJ45	Gene names	Dlx5
Domain Architecture
Description	Homeobox protein DLX-5.

CUTL1_HUMAN
NC score	0.074188 (rank : 99)	θ value	1.38821 (rank : 72)
Query Neighborhood Hits	127	Target Neighborhood Hits	1574	Shared Neighborhood Hits	63
SwissProt Accessions	P39880, Q6NYH4, Q9UEV5	Gene names	CUTL1
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP).

HLX1_HUMAN
NC score	0.074070 (rank : 100)	θ value	θ > 10 (rank : 175)
Query Neighborhood Hits	127	Target Neighborhood Hits	370	Shared Neighborhood Hits	63
SwissProt Accessions	Q14774, Q15988	Gene names	HLX1
Domain Architecture
Description	Homeobox protein HLX1 (Homeobox protein HB24).

DUX4_HUMAN
NC score	0.074064 (rank : 101)	θ value	θ > 10 (rank : 159)
Query Neighborhood Hits	127	Target Neighborhood Hits	403	Shared Neighborhood Hits	59
SwissProt Accessions	Q9UBX2	Gene names	DUX4, DUX10
Domain Architecture	No domain graphic available
Description	Double homeobox protein 4 (Double homeobox protein 10) (Double homeobox protein 4/10).

HXB7_MOUSE
NC score	0.073541 (rank : 102)	θ value	θ > 10 (rank : 214)
Query Neighborhood Hits	127	Target Neighborhood Hits	314	Shared Neighborhood Hits	53
SwissProt Accessions	P09024, Q3UW15	Gene names	Hoxb7, Hox-2.3, Hoxb-7
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (Homeobox protein MH-22B).

HXA1_MOUSE
NC score	0.073429 (rank : 103)	θ value	θ > 10 (rank : 192)
Query Neighborhood Hits	127	Target Neighborhood Hits	341	Shared Neighborhood Hits	58
SwissProt Accessions	P09022, P15463	Gene names	Hoxa1, Era-1, Hox-1.6, Hoxa-1
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein ERA-1-399).

DLX3_HUMAN
NC score	0.073408 (rank : 104)	θ value	θ > 10 (rank : 150)
Query Neighborhood Hits	127	Target Neighborhood Hits	369	Shared Neighborhood Hits	67
SwissProt Accessions	O60479	Gene names	DLX3
Domain Architecture
Description	Homeobox protein DLX-3.

TITF1_HUMAN
NC score	0.072470 (rank : 105)	θ value	θ > 10 (rank : 296)
Query Neighborhood Hits	127	Target Neighborhood Hits	332	Shared Neighborhood Hits	55
SwissProt Accessions	P43699, O14954, O14955, Q9BRJ8	Gene names	TITF1, NKX2-1, NKX2A, TTF1
Domain Architecture
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1) (Homeobox protein NK-2 homolog A).

HXA1_HUMAN
NC score	0.072419 (rank : 106)	θ value	θ > 10 (rank : 191)
Query Neighborhood Hits	127	Target Neighborhood Hits	334	Shared Neighborhood Hits	56
SwissProt Accessions	P49639, O43363	Gene names	HOXA1, HOX1F
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1F).

HXD11_MOUSE
NC score	0.071639 (rank : 107)	θ value	5.27518 (rank : 104)
Query Neighborhood Hits	127	Target Neighborhood Hits	376	Shared Neighborhood Hits	59
SwissProt Accessions	P23813	Gene names	Hoxd11, Hox-4.6, Hoxd-11
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5).

GSC_HUMAN
NC score	0.071075 (rank : 108)	θ value	θ > 10 (rank : 165)
Query Neighborhood Hits	127	Target Neighborhood Hits	369	Shared Neighborhood Hits	66
SwissProt Accessions	P56915, Q86YR1	Gene names	GSC
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid.

TITF1_MOUSE
NC score	0.070981 (rank : 109)	θ value	θ > 10 (rank : 297)
Query Neighborhood Hits	127	Target Neighborhood Hits	335	Shared Neighborhood Hits	55
SwissProt Accessions	P50220	Gene names	Titf1, Nkx-2.1, Nkx2-1, Ttf1
Domain Architecture	No domain graphic available
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1).

HXB13_HUMAN
NC score	0.070979 (rank : 110)	θ value	θ > 10 (rank : 203)
Query Neighborhood Hits	127	Target Neighborhood Hits	377	Shared Neighborhood Hits	64
SwissProt Accessions	Q92826, Q96QM4, Q99810	Gene names	HOXB13
Domain Architecture
Description	Homeobox protein Hox-B13.

HXB7_HUMAN
NC score	0.070489 (rank : 111)	θ value	θ > 10 (rank : 213)
Query Neighborhood Hits	127	Target Neighborhood Hits	311	Shared Neighborhood Hits	52
SwissProt Accessions	P09629, Q15957	Gene names	HOXB7, HOX2C
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2C) (HHO.C1).

HXA6_HUMAN
NC score	0.070174 (rank : 112)	θ value	θ > 10 (rank : 197)
Query Neighborhood Hits	127	Target Neighborhood Hits	309	Shared Neighborhood Hits	54
SwissProt Accessions	P31267, Q9UPM0	Gene names	HOXA6, HOX1B
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A6 (Hox-1B).

DLX3_MOUSE
NC score	0.069969 (rank : 113)	θ value	θ > 10 (rank : 151)
Query Neighborhood Hits	127	Target Neighborhood Hits	367	Shared Neighborhood Hits	67
SwissProt Accessions	Q64205	Gene names	Dlx3
Domain Architecture
Description	Homeobox protein DLX-3.

DUX1_HUMAN
NC score	0.069910 (rank : 114)	θ value	θ > 10 (rank : 157)
Query Neighborhood Hits	127	Target Neighborhood Hits	330	Shared Neighborhood Hits	57
SwissProt Accessions	O43812	Gene names	DUX1
Domain Architecture	No domain graphic available
Description	Double homeobox protein 1.

PITX1_HUMAN
NC score	0.069864 (rank : 115)	θ value	θ > 10 (rank : 280)
Query Neighborhood Hits	127	Target Neighborhood Hits	353	Shared Neighborhood Hits	63
SwissProt Accessions	P78337, O14677, O60425, Q9BTI5	Gene names	PITX1, BFT, PTX1
Domain Architecture
Description	Pituitary homeobox 1 (Hindlimb expressed homeobox protein backfoot).

GSC_MOUSE
NC score	0.069702 (rank : 116)	θ value	θ > 10 (rank : 166)
Query Neighborhood Hits	127	Target Neighborhood Hits	368	Shared Neighborhood Hits	63
SwissProt Accessions	Q02591	Gene names	Gsc
Domain Architecture
Description	Homeobox protein goosecoid.

DUX5_HUMAN
NC score	0.069619 (rank : 117)	θ value	θ > 10 (rank : 160)
Query Neighborhood Hits	127	Target Neighborhood Hits	330	Shared Neighborhood Hits	57
SwissProt Accessions	Q96PT3	Gene names	DUX5
Domain Architecture	No domain graphic available
Description	Double homeobox protein 5.

DLX5_HUMAN
NC score	0.069373 (rank : 118)	θ value	θ > 10 (rank : 154)
Query Neighborhood Hits	127	Target Neighborhood Hits	405	Shared Neighborhood Hits	69
SwissProt Accessions	P56178, Q9UPL1	Gene names	DLX5
Domain Architecture
Description	Homeobox protein DLX-5.

HXC11_HUMAN
NC score	0.069177 (rank : 119)	θ value	θ > 10 (rank : 219)
Query Neighborhood Hits	127	Target Neighborhood Hits	349	Shared Neighborhood Hits	54
SwissProt Accessions	O43248, Q96DH2	Gene names	HOXC11
Domain Architecture
Description	Homeobox protein Hox-C11.

HXD3_MOUSE
NC score	0.069089 (rank : 120)	θ value	0.21417 (rank : 53)
Query Neighborhood Hits	127	Target Neighborhood Hits	435	Shared Neighborhood Hits	58
SwissProt Accessions	P09027, Q3UUD3	Gene names	Hoxd3, Hox-4.1, Hoxd-3
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4.1) (Homeobox protein MH-19).

OTP_MOUSE
NC score	0.069077 (rank : 121)	θ value	θ > 10 (rank : 268)
Query Neighborhood Hits	127	Target Neighborhood Hits	387	Shared Neighborhood Hits	65
SwissProt Accessions	O09113	Gene names	Otp
Domain Architecture
Description	Homeobox protein orthopedia.

DLX4_MOUSE
NC score	0.068949 (rank : 122)	θ value	θ > 10 (rank : 153)
Query Neighborhood Hits	127	Target Neighborhood Hits	352	Shared Neighborhood Hits	63
SwissProt Accessions	P70436, Q3UM51, Q8R4I3	Gene names	Dlx4, Dlx7
Domain Architecture
Description	Homeobox protein DLX-4 (DLX-7).

HLX1_MOUSE
NC score	0.068590 (rank : 123)	θ value	θ > 10 (rank : 176)
Query Neighborhood Hits	127	Target Neighborhood Hits	362	Shared Neighborhood Hits	60
SwissProt Accessions	Q61670	Gene names	Hlx1, Hlx
Domain Architecture
Description	Homeobox protein HLX1.

HME2_HUMAN
NC score	0.068220 (rank : 124)	θ value	θ > 10 (rank : 183)
Query Neighborhood Hits	127	Target Neighborhood Hits	355	Shared Neighborhood Hits	67
SwissProt Accessions	P19622	Gene names	EN2
Domain Architecture
Description	Homeobox protein engrailed-2 (Hu-En-2).

HME2_MOUSE
NC score	0.068014 (rank : 125)	θ value	θ > 10 (rank : 184)
Query Neighborhood Hits	127	Target Neighborhood Hits	352	Shared Neighborhood Hits	67
SwissProt Accessions	P09066	Gene names	En2, En-2
Domain Architecture
Description	Homeobox protein engrailed-2 (Mo-En-2).

LHX2_MOUSE
NC score	0.067959 (rank : 126)	θ value	5.27518 (rank : 107)
Query Neighborhood Hits	127	Target Neighborhood Hits	431	Shared Neighborhood Hits	63
SwissProt Accessions	Q9Z0S2	Gene names	Lhx2
Domain Architecture
Description	LIM/homeobox protein Lhx2.

ALX4_MOUSE
NC score	0.067888 (rank : 127)	θ value	θ > 10 (rank : 131)
Query Neighborhood Hits	127	Target Neighborhood Hits	369	Shared Neighborhood Hits	71
SwissProt Accessions	O35137	Gene names	Alx4
Domain Architecture
Description	Homeobox protein aristaless-like 4 (ALX-4).

HXA6_MOUSE
NC score	0.067838 (rank : 128)	θ value	θ > 10 (rank : 198)
Query Neighborhood Hits	127	Target Neighborhood Hits	304	Shared Neighborhood Hits	52
SwissProt Accessions	P09092, Q9JI98	Gene names	Hoxa6, Hox-1.2, Hoxa-6
Domain Architecture
Description	Homeobox protein Hox-A6 (Hox-1.2) (M5-4).

BARX2_HUMAN
NC score	0.067699 (rank : 129)	θ value	θ > 10 (rank : 135)
Query Neighborhood Hits	127	Target Neighborhood Hits	387	Shared Neighborhood Hits	60
SwissProt Accessions	Q9UMQ3, O43518	Gene names	BARX2
Domain Architecture
Description	Homeobox protein BarH-like 2.

HXD1_MOUSE
NC score	0.067687 (rank : 130)	θ value	θ > 10 (rank : 235)
Query Neighborhood Hits	127	Target Neighborhood Hits	381	Shared Neighborhood Hits	58
SwissProt Accessions	Q01822	Gene names	Hoxd1, Hox-4.9, Hoxd-1
Domain Architecture
Description	Homeobox protein Hox-D1 (Hox-4.9).

HXA13_MOUSE
NC score	0.067596 (rank : 131)	θ value	θ > 10 (rank : 190)
Query Neighborhood Hits	127	Target Neighborhood Hits	351	Shared Neighborhood Hits	65
SwissProt Accessions	Q62424	Gene names	Hoxa13, Hox-1.10
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1.10).

HMBX1_HUMAN
NC score	0.067580 (rank : 132)	θ value	θ > 10 (rank : 179)
Query Neighborhood Hits	127	Target Neighborhood Hits	118	Shared Neighborhood Hits	25
SwissProt Accessions	Q6NT76, Q3Y6P1, Q96GS5, Q9H701	Gene names	HMBOX1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

LHX2_HUMAN
NC score	0.067574 (rank : 133)	θ value	5.27518 (rank : 106)
Query Neighborhood Hits	127	Target Neighborhood Hits	432	Shared Neighborhood Hits	64
SwissProt Accessions	P50458, O95860, Q8N1Z3	Gene names	LHX2, LH2
Domain Architecture
Description	LIM/homeobox protein Lhx2 (Homeobox protein LH-2).

HXA9_MOUSE
NC score	0.067492 (rank : 134)	θ value	θ > 10 (rank : 202)
Query Neighborhood Hits	127	Target Neighborhood Hits	334	Shared Neighborhood Hits	62
SwissProt Accessions	P09631, O70154, O70155	Gene names	Hoxa9, Hox-1.7, Hoxa-9
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1.7).

HXA9_HUMAN
NC score	0.067367 (rank : 135)	θ value	θ > 10 (rank : 201)
Query Neighborhood Hits	127	Target Neighborhood Hits	332	Shared Neighborhood Hits	62
SwissProt Accessions	P31269, O43369, O43429, Q99820	Gene names	HOXA9, HOX1G
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1G).

HXA7_HUMAN
NC score	0.067227 (rank : 136)	θ value	θ > 10 (rank : 199)
Query Neighborhood Hits	127	Target Neighborhood Hits	309	Shared Neighborhood Hits	51
SwissProt Accessions	P31268, O43368, O43486, O95655, Q9NSC8, Q9UDM1	Gene names	HOXA7, HOX1A
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1A) (Hox 1.1).

HXA13_HUMAN
NC score	0.067165 (rank : 137)	θ value	θ > 10 (rank : 189)
Query Neighborhood Hits	127	Target Neighborhood Hits	353	Shared Neighborhood Hits	65
SwissProt Accessions	P31271, O43371	Gene names	HOXA13, HOX1J
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1J).

ATBF1_HUMAN
NC score	0.066529 (rank : 138)	θ value	0.47712 (rank : 63)
Query Neighborhood Hits	127	Target Neighborhood Hits	1547	Shared Neighborhood Hits	83
SwissProt Accessions	Q15911, O15101, Q13719	Gene names	ATBF1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

ATBF1_MOUSE
NC score	0.066393 (rank : 139)	θ value	0.47712 (rank : 64)
Query Neighborhood Hits	127	Target Neighborhood Hits	1841	Shared Neighborhood Hits	85
SwissProt Accessions	Q61329	Gene names	Atbf1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

PROP1_HUMAN
NC score	0.066276 (rank : 140)	θ value	θ > 10 (rank : 288)
Query Neighborhood Hits	127	Target Neighborhood Hits	354	Shared Neighborhood Hits	66
SwissProt Accessions	O75360	Gene names	PROP1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

HXB6_HUMAN
NC score	0.065678 (rank : 141)	θ value	θ > 10 (rank : 211)
Query Neighborhood Hits	127	Target Neighborhood Hits	307	Shared Neighborhood Hits	53
SwissProt Accessions	P17509, P09068, Q9HB11, Q9UGH2	Gene names	HOXB6, HOX2B
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2B) (Hox-2.2) (HU-2).

PRRXL_MOUSE
NC score	0.065480 (rank : 142)	θ value	θ > 10 (rank : 294)
Query Neighborhood Hits	127	Target Neighborhood Hits	350	Shared Neighborhood Hits	67
SwissProt Accessions	Q8BYH0, Q8K3F8	Gene names	Prrxl1, Drg11
Domain Architecture	No domain graphic available
Description	Paired-related homeobox protein-like 1 (Dorsal root ganglion 11) (Homeobox protein DRG11).

DLX4_HUMAN
NC score	0.065463 (rank : 143)	θ value	θ > 10 (rank : 152)
Query Neighborhood Hits	127	Target Neighborhood Hits	350	Shared Neighborhood Hits	62
SwissProt Accessions	Q92988, O60480, Q13265, Q6PJK0, Q9HBE0	Gene names	DLX4, BP1, DLX7, DLX8
Domain Architecture	No domain graphic available
Description	Homeobox protein DLX-4 (DLX-7) (DLX-8) (Beta protein 1).

EMX1_HUMAN
NC score	0.065444 (rank : 144)	θ value	5.27518 (rank : 101)
Query Neighborhood Hits	127	Target Neighborhood Hits	336	Shared Neighborhood Hits	63
SwissProt Accessions	Q04741, Q86XB0	Gene names	EMX1
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX1 (Empty spiracles homolog 1) (Empty spiracles- like protein 1).

LHX9_HUMAN
NC score	0.065403 (rank : 145)	θ value	θ > 10 (rank : 250)
Query Neighborhood Hits	127	Target Neighborhood Hits	444	Shared Neighborhood Hits	61
SwissProt Accessions	Q9NQ69, Q5VUE3, Q9BYU6, Q9NQ70	Gene names	LHX9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

HXD1_HUMAN
NC score	0.065371 (rank : 146)	θ value	θ > 10 (rank : 234)
Query Neighborhood Hits	127	Target Neighborhood Hits	337	Shared Neighborhood Hits	57
SwissProt Accessions	Q9GZZ0	Gene names	HOXD1
Domain Architecture
Description	Homeobox protein Hox-D1.

PAX7_HUMAN
NC score	0.065362 (rank : 147)	θ value	θ > 10 (rank : 273)
Query Neighborhood Hits	127	Target Neighborhood Hits	456	Shared Neighborhood Hits	79
SwissProt Accessions	P23759	Gene names	PAX7, HUP1
Domain Architecture
Description	Paired box protein Pax-7 (HUP1).

HXC9_MOUSE
NC score	0.065326 (rank : 148)	θ value	θ > 10 (rank : 229)
Query Neighborhood Hits	127	Target Neighborhood Hits	338	Shared Neighborhood Hits	59
SwissProt Accessions	P09633	Gene names	Hoxc9, Hox-3.2, Hoxc-9
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3.2).

HXB6_MOUSE
NC score	0.065325 (rank : 149)	θ value	θ > 10 (rank : 212)
Query Neighborhood Hits	127	Target Neighborhood Hits	309	Shared Neighborhood Hits	53
SwissProt Accessions	P09023	Gene names	Hoxb6, Hox-2.2, Hoxb-6
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2.2) (Homeobox protein MH-22A).

HXC9_HUMAN
NC score	0.065311 (rank : 150)	θ value	θ > 10 (rank : 228)
Query Neighborhood Hits	127	Target Neighborhood Hits	339	Shared Neighborhood Hits	59
SwissProt Accessions	P31274, Q9H1I0	Gene names	HOXC9, HOX3B
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3B).

PROP1_MOUSE
NC score	0.065212 (rank : 151)	θ value	θ > 10 (rank : 289)
Query Neighborhood Hits	127	Target Neighborhood Hits	361	Shared Neighborhood Hits	64
SwissProt Accessions	P97458	Gene names	Prop1, Prop-1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

ALX4_HUMAN
NC score	0.064947 (rank : 152)	θ value	θ > 10 (rank : 130)
Query Neighborhood Hits	127	Target Neighborhood Hits	394	Shared Neighborhood Hits	67
SwissProt Accessions	Q9H161, Q96JN7, Q9H198, Q9HAY9	Gene names	ALX4, KIAA1788
Domain Architecture
Description	Homeobox protein aristaless-like 4.

PAX7_MOUSE
NC score	0.064884 (rank : 153)	θ value	θ > 10 (rank : 274)
Query Neighborhood Hits	127	Target Neighborhood Hits	422	Shared Neighborhood Hits	80
SwissProt Accessions	P47239, Q9ES16	Gene names	Pax7, Pax-7
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-7.

PO6F1_HUMAN
NC score	0.064730 (rank : 154)	θ value	θ > 10 (rank : 286)
Query Neighborhood Hits	127	Target Neighborhood Hits	370	Shared Neighborhood Hits	59
SwissProt Accessions	Q14863	Gene names	POU6F1, BRN5, MPOU, TCFB1
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (mPOU homeobox protein) (Brain-specific homeobox/POU domain protein 5) (Brain-5) (Brn-5 protein).

HXB13_MOUSE
NC score	0.064699 (rank : 155)	θ value	θ > 10 (rank : 204)
Query Neighborhood Hits	127	Target Neighborhood Hits	384	Shared Neighborhood Hits	63
SwissProt Accessions	P70321, Q80Y12	Gene names	Hoxb13
Domain Architecture
Description	Homeobox protein Hox-B13.

NKX25_HUMAN
NC score	0.064548 (rank : 156)	θ value	θ > 10 (rank : 261)
Query Neighborhood Hits	127	Target Neighborhood Hits	338	Shared Neighborhood Hits	63
SwissProt Accessions	P52952	Gene names	NKX2-5, CSX, NKX2.5, NKX2E
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

BARX2_MOUSE
NC score	0.064412 (rank : 157)	θ value	θ > 10 (rank : 136)
Query Neighborhood Hits	127	Target Neighborhood Hits	335	Shared Neighborhood Hits	60
SwissProt Accessions	O08686	Gene names	Barx2
Domain Architecture
Description	Homeobox protein BarH-like 2.

DUX3_HUMAN
NC score	0.064190 (rank : 158)	θ value	θ > 10 (rank : 158)
Query Neighborhood Hits	127	Target Neighborhood Hits	312	Shared Neighborhood Hits	57
SwissProt Accessions	Q96PT4, Q9UND2	Gene names	DUX3
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 3.

PO6F1_MOUSE
NC score	0.064185 (rank : 159)	θ value	θ > 10 (rank : 287)
Query Neighborhood Hits	127	Target Neighborhood Hits	581	Shared Neighborhood Hits	68
SwissProt Accessions	Q07916, Q91XK3	Gene names	Pou6f1, Emb
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (Octamer-binding transcription factor EMB) (Transcription regulatory protein MCP-1).

DBX1_MOUSE
NC score	0.063768 (rank : 160)	θ value	θ > 10 (rank : 145)
Query Neighborhood Hits	127	Target Neighborhood Hits	346	Shared Neighborhood Hits	54
SwissProt Accessions	P52950	Gene names	Dbx1, Dbx
Domain Architecture
Description	Homeobox protein DBX1.

LHX9_MOUSE
NC score	0.063728 (rank : 161)	θ value	θ > 10 (rank : 251)
Query Neighborhood Hits	127	Target Neighborhood Hits	445	Shared Neighborhood Hits	61
SwissProt Accessions	Q9WUH2, Q9QYQ5, Q9QYQ6, Q9QZ00, Q9WU44	Gene names	Lhx9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

HXB1_HUMAN
NC score	0.063702 (rank : 162)	θ value	θ > 10 (rank : 205)
Query Neighborhood Hits	127	Target Neighborhood Hits	356	Shared Neighborhood Hits	59
SwissProt Accessions	P14653	Gene names	HOXB1, HOX2I
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2I).

HXB1_MOUSE
NC score	0.063455 (rank : 163)	θ value	θ > 10 (rank : 206)
Query Neighborhood Hits	127	Target Neighborhood Hits	341	Shared Neighborhood Hits	58
SwissProt Accessions	P17919, Q3ZAY6, Q9CYH3	Gene names	Hoxb1, Hox-2.9, Hoxb-1
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2.9).

DLX2_MOUSE
NC score	0.063282 (rank : 164)	θ value	θ > 10 (rank : 149)
Query Neighborhood Hits	127	Target Neighborhood Hits	352	Shared Neighborhood Hits	64
SwissProt Accessions	P40764	Gene names	Dlx2, Tes-1, Tes1
Domain Architecture
Description	Homeobox protein DLX-2 (Homeobox protein TES-1).

DLX2_HUMAN
NC score	0.063262 (rank : 165)	θ value	θ > 10 (rank : 148)
Query Neighborhood Hits	127	Target Neighborhood Hits	355	Shared Neighborhood Hits	64
SwissProt Accessions	Q07687	Gene names	DLX2
Domain Architecture
Description	Homeobox protein DLX-2.

HXD13_MOUSE
NC score	0.062887 (rank : 166)	θ value	θ > 10 (rank : 233)
Query Neighborhood Hits	127	Target Neighborhood Hits	324	Shared Neighborhood Hits	62
SwissProt Accessions	P70217, Q2VPB0, Q2VPB1, Q64177	Gene names	Hoxd13, Hox-4.8
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4.8).

HXD13_HUMAN
NC score	0.062844 (rank : 167)	θ value	θ > 10 (rank : 232)
Query Neighborhood Hits	127	Target Neighborhood Hits	332	Shared Neighborhood Hits	62
SwissProt Accessions	P35453	Gene names	HOXD13, HOX4I
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4I).

HXD3_HUMAN
NC score	0.062841 (rank : 168)	θ value	5.27518 (rank : 105)
Query Neighborhood Hits	127	Target Neighborhood Hits	433	Shared Neighborhood Hits	58
SwissProt Accessions	P31249, Q99955, Q9BSC5	Gene names	HOXD3, HOX4A
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4A).

PAX3_HUMAN
NC score	0.061664 (rank : 169)	θ value	θ > 10 (rank : 269)
Query Neighborhood Hits	127	Target Neighborhood Hits	513	Shared Neighborhood Hits	68
SwissProt Accessions	P23760, Q16448	Gene names	PAX3, HUP2
Domain Architecture
Description	Paired box protein Pax-3 (HUP2).

NKX12_MOUSE
NC score	0.061591 (rank : 170)	θ value	θ > 10 (rank : 256)
Query Neighborhood Hits	127	Target Neighborhood Hits	332	Shared Neighborhood Hits	50
SwissProt Accessions	P42580, Q9JHF2, Q9JKW5, Q9JKW6, Q9JKW9, Q9JKX0, Q9JKX1	Gene names	Nkx1-2, Nkx1.1, Sax1
Domain Architecture
Description	NK1 transcription factor-related protein 2 (Homeobox protein SAX-1) (NKX-1.1).

HME1_HUMAN
NC score	0.061404 (rank : 171)	θ value	θ > 10 (rank : 181)
Query Neighborhood Hits	127	Target Neighborhood Hits	384	Shared Neighborhood Hits	59
SwissProt Accessions	Q05925	Gene names	EN1
Domain Architecture
Description	Homeobox protein engrailed-1 (Hu-En-1).

HXD9_HUMAN
NC score	0.061380 (rank : 172)	θ value	θ > 10 (rank : 240)
Query Neighborhood Hits	127	Target Neighborhood Hits	352	Shared Neighborhood Hits	58
SwissProt Accessions	P28356	Gene names	HOXD9, HOX4C
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4C) (Hox-5.2).

HXD9_MOUSE
NC score	0.061233 (rank : 173)	θ value	θ > 10 (rank : 241)
Query Neighborhood Hits	127	Target Neighborhood Hits	359	Shared Neighborhood Hits	58
SwissProt Accessions	P28357, Q3UYS2	Gene names	Hoxd9, Hox-4.4, Hoxd-9
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4.4) (Hox-5.2).

HME1_MOUSE
NC score	0.061224 (rank : 174)	θ value	θ > 10 (rank : 182)
Query Neighborhood Hits	127	Target Neighborhood Hits	397	Shared Neighborhood Hits	59
SwissProt Accessions	P09065	Gene names	En1, En-1
Domain Architecture
Description	Homeobox protein engrailed-1 (Mo-En-1).

HMX2_MOUSE
NC score	0.061159 (rank : 175)	θ value	θ > 10 (rank : 185)
Query Neighborhood Hits	127	Target Neighborhood Hits	354	Shared Neighborhood Hits	63
SwissProt Accessions	P43687, Q8R1Q2	Gene names	Hmx2, Nkx-5.2, Nkx5-2
Domain Architecture
Description	Homeobox protein HMX2 (Homeobox protein Nkx-5.2).

RX_MOUSE
NC score	0.060964 (rank : 176)	θ value	0.279714 (rank : 57)
Query Neighborhood Hits	127	Target Neighborhood Hits	429	Shared Neighborhood Hits	60
SwissProt Accessions	O35602, O08748	Gene names	Rax, Rx
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

HXC4_MOUSE
NC score	0.060664 (rank : 177)	θ value	1.81305 (rank : 77)
Query Neighborhood Hits	127	Target Neighborhood Hits	365	Shared Neighborhood Hits	54
SwissProt Accessions	Q08624	Gene names	Hoxc4, Hox-3.5, Hoxc-4
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3.5).

PEPP1_HUMAN
NC score	0.060425 (rank : 178)	θ value	θ > 10 (rank : 275)
Query Neighborhood Hits	127	Target Neighborhood Hits	338	Shared Neighborhood Hits	53
SwissProt Accessions	Q8NHV9, O95030, Q3SYE0	Gene names	PEPP1, OTEX
Domain Architecture
Description	Paired-like homeobox protein PEPP-1 (Ovary-, testis- and epididymis- expressed gene protein).

PAX3_MOUSE
NC score	0.060384 (rank : 179)	θ value	θ > 10 (rank : 270)
Query Neighborhood Hits	127	Target Neighborhood Hits	478	Shared Neighborhood Hits	67
SwissProt Accessions	P24610, Q3UFQ9, Q8BRE7, Q9CXI6	Gene names	Pax3, Pax-3
Domain Architecture
Description	Paired box protein Pax-3.

NKX22_MOUSE
NC score	0.060301 (rank : 180)	θ value	θ > 10 (rank : 258)
Query Neighborhood Hits	127	Target Neighborhood Hits	336	Shared Neighborhood Hits	61
SwissProt Accessions	P42586	Gene names	Nkx2-2, Nkx-2.2, Nkx2b
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

HXA3_MOUSE
NC score	0.060206 (rank : 181)	θ value	θ > 10 (rank : 194)
Query Neighborhood Hits	127	Target Neighborhood Hits	558	Shared Neighborhood Hits	65
SwissProt Accessions	P02831, Q4V9Z8, Q61197	Gene names	Hoxa3, Hox-1.5, Hoxa-3
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1.5) (MO-10).

HHEX_HUMAN
NC score	0.060117 (rank : 182)	θ value	θ > 10 (rank : 173)
Query Neighborhood Hits	127	Target Neighborhood Hits	358	Shared Neighborhood Hits	51
SwissProt Accessions	Q03014	Gene names	HHEX, HEX, PRH, PRHX
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

PAX4_HUMAN
NC score	0.060061 (rank : 183)	θ value	θ > 10 (rank : 271)
Query Neighborhood Hits	127	Target Neighborhood Hits	367	Shared Neighborhood Hits	64
SwissProt Accessions	O43316, O95161, Q6B0H0	Gene names	PAX4
Domain Architecture
Description	Paired box protein Pax-4.

HXC4_HUMAN
NC score	0.059904 (rank : 184)	θ value	1.81305 (rank : 76)
Query Neighborhood Hits	127	Target Neighborhood Hits	361	Shared Neighborhood Hits	55
SwissProt Accessions	P09017	Gene names	HOXC4, HOX3E
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3E) (CP19).

HXB4_HUMAN
NC score	0.059720 (rank : 185)	θ value	2.36792 (rank : 85)
Query Neighborhood Hits	127	Target Neighborhood Hits	376	Shared Neighborhood Hits	55
SwissProt Accessions	P17483, Q9NTA0	Gene names	HOXB4, HOX2F
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6).

GSH2_MOUSE
NC score	0.059715 (rank : 186)	θ value	θ > 10 (rank : 168)
Query Neighborhood Hits	127	Target Neighborhood Hits	319	Shared Neighborhood Hits	56
SwissProt Accessions	P31316	Gene names	Gsh2, Gsh-2
Domain Architecture
Description	Homeobox protein GSH-2.

HXB9_MOUSE
NC score	0.059693 (rank : 187)	θ value	θ > 10 (rank : 218)
Query Neighborhood Hits	127	Target Neighborhood Hits	344	Shared Neighborhood Hits	55
SwissProt Accessions	P20615	Gene names	Hoxb9, Hox-2.5, Hoxb-9
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2.5).

HXC6_HUMAN
NC score	0.059627 (rank : 188)	θ value	θ > 10 (rank : 224)
Query Neighborhood Hits	127	Target Neighborhood Hits	306	Shared Neighborhood Hits	51
SwissProt Accessions	P09630	Gene names	HOXC6, HOX3C
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3C) (HHO.C8) (CP25).

HXC6_MOUSE
NC score	0.059627 (rank : 189)	θ value	θ > 10 (rank : 225)
Query Neighborhood Hits	127	Target Neighborhood Hits	306	Shared Neighborhood Hits	51
SwissProt Accessions	P10629, Q61683	Gene names	Hoxc6, Hox-3.3, Hoxc-6
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3.3) (Hox-6.1).

HESX1_MOUSE
NC score	0.059601 (rank : 190)	θ value	θ > 10 (rank : 172)
Query Neighborhood Hits	127	Target Neighborhood Hits	331	Shared Neighborhood Hits	52
SwissProt Accessions	Q61658, Q61047	Gene names	Hesx1, Hes-1, Rpx
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (Anterior- restricted homeobox protein) (Rathke pouch homeo box).

HLXB9_HUMAN
NC score	0.059583 (rank : 191)	θ value	θ > 10 (rank : 177)
Query Neighborhood Hits	127	Target Neighborhood Hits	336	Shared Neighborhood Hits	59
SwissProt Accessions	P50219, Q9Y648	Gene names	HLXB9
Domain Architecture
Description	Homeobox protein HB9.

TLX3_MOUSE
NC score	0.059318 (rank : 192)	θ value	θ > 10 (rank : 302)
Query Neighborhood Hits	127	Target Neighborhood Hits	346	Shared Neighborhood Hits	61
SwissProt Accessions	O55144	Gene names	Tlx3, Hox11l2, Rnx, Tlx1l2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox TLX-3) (Homeobox protein Hox-11L2) (Respiratory neuron homeobox protein).

HXA4_MOUSE
NC score	0.058925 (rank : 193)	θ value	θ > 10 (rank : 196)
Query Neighborhood Hits	127	Target Neighborhood Hits	379	Shared Neighborhood Hits	56
SwissProt Accessions	P06798, Q61684, Q64388, Q8BPE6	Gene names	Hoxa4, Hox-1.4, Hoxa-4
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1.4) (Homeobox protein MH-3).

GSH2_HUMAN
NC score	0.058773 (rank : 194)	θ value	θ > 10 (rank : 167)
Query Neighborhood Hits	127	Target Neighborhood Hits	324	Shared Neighborhood Hits	56
SwissProt Accessions	Q9BZM3	Gene names	GSH2
Domain Architecture
Description	Homeobox protein GSH-2.

IPF1_MOUSE
NC score	0.058436 (rank : 195)	θ value	θ > 10 (rank : 243)
Query Neighborhood Hits	127	Target Neighborhood Hits	340	Shared Neighborhood Hits	56
SwissProt Accessions	P52946	Gene names	Ipf1, Pdx1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox 1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Pancreas/duodenum homeobox 1).

NKX25_MOUSE
NC score	0.058330 (rank : 196)	θ value	θ > 10 (rank : 262)
Query Neighborhood Hits	127	Target Neighborhood Hits	347	Shared Neighborhood Hits	61
SwissProt Accessions	P42582, P97335	Gene names	Nkx2-5, Csx, Nkx-2.5, Nkx2e
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

HXB4_MOUSE
NC score	0.058293 (rank : 197)	θ value	4.03905 (rank : 96)
Query Neighborhood Hits	127	Target Neighborhood Hits	375	Shared Neighborhood Hits	54
SwissProt Accessions	P10284, Q3UZB4, Q4VBG0	Gene names	Hoxb4, Hox-2.6, Hoxb-4
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2.6).

HXA3_HUMAN
NC score	0.058238 (rank : 198)	θ value	θ > 10 (rank : 193)
Query Neighborhood Hits	127	Target Neighborhood Hits	535	Shared Neighborhood Hits	60
SwissProt Accessions	O43365	Gene names	HOXA3, HOX1E
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1E).

HXB9_HUMAN
NC score	0.057945 (rank : 199)	θ value	θ > 10 (rank : 217)
Query Neighborhood Hits	127	Target Neighborhood Hits	344	Shared Neighborhood Hits	54
SwissProt Accessions	P17482, Q9H1I1	Gene names	HOXB9, HOX2E
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2E) (Hox-2.5).

HLXB9_MOUSE
NC score	0.057792 (rank : 200)	θ value	θ > 10 (rank : 178)
Query Neighborhood Hits	127	Target Neighborhood Hits	354	Shared Neighborhood Hits	63
SwissProt Accessions	Q9QZW9	Gene names	Hlxb9
Domain Architecture
Description	Homeobox protein HB9.

HXC13_HUMAN
NC score	0.057665 (rank : 201)	θ value	θ > 10 (rank : 220)
Query Neighborhood Hits	127	Target Neighborhood Hits	336	Shared Neighborhood Hits	62
SwissProt Accessions	P31276, Q96J32, Q9NR24, Q9NYD5	Gene names	HOXC13, HOX3G
Domain Architecture
Description	Homeobox protein Hox-C13 (Hox-3G).

HXC13_MOUSE
NC score	0.057650 (rank : 202)	θ value	θ > 10 (rank : 221)
Query Neighborhood Hits	127	Target Neighborhood Hits	337	Shared Neighborhood Hits	62
SwissProt Accessions	P50207, Q53Z78, Q920I7	Gene names	Hoxc13, Hoxc-13
Domain Architecture
Description	Homeobox protein Hox-C13.

PRRX1_HUMAN
NC score	0.057471 (rank : 203)	θ value	θ > 10 (rank : 290)
Query Neighborhood Hits	127	Target Neighborhood Hits	347	Shared Neighborhood Hits	59
SwissProt Accessions	P54821, O60807	Gene names	PRRX1, PMX1
Domain Architecture
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein PHOX1).

NKX22_HUMAN
NC score	0.057328 (rank : 204)	θ value	θ > 10 (rank : 257)
Query Neighborhood Hits	127	Target Neighborhood Hits	342	Shared Neighborhood Hits	57
SwissProt Accessions	O95096	Gene names	NKX2-2, NKX2.2, NKX2B
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

PAX4_MOUSE
NC score	0.057048 (rank : 205)	θ value	θ > 10 (rank : 272)
Query Neighborhood Hits	127	Target Neighborhood Hits	370	Shared Neighborhood Hits	62
SwissProt Accessions	P32115, P97341, Q9QUR1, Q9R091	Gene names	Pax4, Pax-4
Domain Architecture
Description	Paired box protein Pax-4.

IPF1_HUMAN
NC score	0.057031 (rank : 206)	θ value	θ > 10 (rank : 242)
Query Neighborhood Hits	127	Target Neighborhood Hits	330	Shared Neighborhood Hits	54
SwissProt Accessions	P52945, O60594	Gene names	IPF1, PDX1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Pancreas/duodenum homeobox 1) (PDX- 1) (Islet/duodenum homeobox-1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Insulin upstream factor 1) (IUF-1) (Glucose- sensitive factor) (GSF).

CDX4_MOUSE
NC score	0.057025 (rank : 207)	θ value	θ > 10 (rank : 143)
Query Neighborhood Hits	127	Target Neighborhood Hits	378	Shared Neighborhood Hits	61
SwissProt Accessions	Q07424	Gene names	Cdx4, Cdx-4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

PHX2B_HUMAN
NC score	0.056850 (rank : 208)	θ value	θ > 10 (rank : 278)
Query Neighborhood Hits	127	Target Neighborhood Hits	407	Shared Neighborhood Hits	58
SwissProt Accessions	Q99453, Q6PJD9	Gene names	PHOX2B, PMX2B
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

PHX2B_MOUSE
NC score	0.056850 (rank : 209)	θ value	θ > 10 (rank : 279)
Query Neighborhood Hits	127	Target Neighborhood Hits	407	Shared Neighborhood Hits	58
SwissProt Accessions	O35690	Gene names	Phox2b, Pmx2b
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

MSX2_HUMAN
NC score	0.056713 (rank : 210)	θ value	θ > 10 (rank : 254)
Query Neighborhood Hits	127	Target Neighborhood Hits	337	Shared Neighborhood Hits	57
SwissProt Accessions	P35548	Gene names	MSX2, HOX8
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8).

RX_HUMAN
NC score	0.056706 (rank : 211)	θ value	1.06291 (rank : 68)
Query Neighborhood Hits	127	Target Neighborhood Hits	423	Shared Neighborhood Hits	61
SwissProt Accessions	Q9Y2V3	Gene names	RAX, RX
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

HHEX_MOUSE
NC score	0.056498 (rank : 212)	θ value	θ > 10 (rank : 174)
Query Neighborhood Hits	127	Target Neighborhood Hits	350	Shared Neighborhood Hits	53
SwissProt Accessions	P43120	Gene names	Hhex, Prhx
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

PRRX2_MOUSE
NC score	0.056330 (rank : 213)	θ value	θ > 10 (rank : 293)
Query Neighborhood Hits	127	Target Neighborhood Hits	351	Shared Neighborhood Hits	57
SwissProt Accessions	Q06348, Q61651	Gene names	Prrx2, Prx2, S8
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Homeobox protein S8).

PRRX1_MOUSE
NC score	0.056103 (rank : 214)	θ value	θ > 10 (rank : 291)
Query Neighborhood Hits	127	Target Neighborhood Hits	346	Shared Neighborhood Hits	57
SwissProt Accessions	P63013, P43271, Q02810	Gene names	Prrx1, Pmx, Pmx1
Domain Architecture	No domain graphic available
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein mHox) (Homeobox protein K-2).

LHX4_MOUSE
NC score	0.055727 (rank : 215)	θ value	θ > 10 (rank : 249)
Query Neighborhood Hits	127	Target Neighborhood Hits	457	Shared Neighborhood Hits	66
SwissProt Accessions	P53776, O08916, Q9R280	Gene names	Lhx4, Gsh-4, Gsh4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

NKX23_HUMAN
NC score	0.055724 (rank : 216)	θ value	θ > 10 (rank : 259)
Query Neighborhood Hits	127	Target Neighborhood Hits	346	Shared Neighborhood Hits	65
SwissProt Accessions	Q8TAU0, Q9NYS6	Gene names	NKX2-3, NKX23, NKX2C
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NKX-2.3) (Homeobox protein NK-2 homolog C).

LHX4_HUMAN
NC score	0.055601 (rank : 217)	θ value	θ > 10 (rank : 248)
Query Neighborhood Hits	127	Target Neighborhood Hits	455	Shared Neighborhood Hits	66
SwissProt Accessions	Q969G2, Q8NHE0, Q8TCJ1, Q8WWX2, Q969W2	Gene names	LHX4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

NKX26_MOUSE
NC score	0.055524 (rank : 218)	θ value	θ > 10 (rank : 263)
Query Neighborhood Hits	127	Target Neighborhood Hits	343	Shared Neighborhood Hits	54
SwissProt Accessions	P43688	Gene names	Nkx2-6, Nkx-2.6, Nkx2f
Domain Architecture
Description	Homeobox protein Nkx-2.6 (Homeobox protein NK-2 homolog F).

HXB3_HUMAN
NC score	0.055348 (rank : 219)	θ value	θ > 10 (rank : 207)
Query Neighborhood Hits	127	Target Neighborhood Hits	559	Shared Neighborhood Hits	65
SwissProt Accessions	P14651, O95615, P17484	Gene names	HOXB3, HOX2G
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2G) (Hox-2.7).

MSX2_MOUSE
NC score	0.055220 (rank : 220)	θ value	θ > 10 (rank : 255)
Query Neighborhood Hits	127	Target Neighborhood Hits	345	Shared Neighborhood Hits	58
SwissProt Accessions	Q03358, Q63856	Gene names	Msx2, Hox-8.1, Msx-2
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8.1).

PRRX2_HUMAN
NC score	0.055206 (rank : 221)	θ value	θ > 10 (rank : 292)
Query Neighborhood Hits	127	Target Neighborhood Hits	348	Shared Neighborhood Hits	57
SwissProt Accessions	Q99811, Q9UIB3	Gene names	PRRX2, PMX2, PRX2
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Paired-related homeobox protein 2).

PHX2A_MOUSE
NC score	0.055187 (rank : 222)	θ value	θ > 10 (rank : 277)
Query Neighborhood Hits	127	Target Neighborhood Hits	338	Shared Neighborhood Hits	56
SwissProt Accessions	Q62066	Gene names	Phox2a, Arix, Phox2, Pmx2, Pmx2a
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (PHOX2A homeodomain protein) (Aristaless homeobox protein homolog).

CDX4_HUMAN
NC score	0.055177 (rank : 223)	θ value	θ > 10 (rank : 142)
Query Neighborhood Hits	127	Target Neighborhood Hits	366	Shared Neighborhood Hits	60
SwissProt Accessions	O14627, Q5JS20	Gene names	CDX4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

PHX2A_HUMAN
NC score	0.055151 (rank : 224)	θ value	θ > 10 (rank : 276)
Query Neighborhood Hits	127	Target Neighborhood Hits	345	Shared Neighborhood Hits	56
SwissProt Accessions	O14813, Q8IVZ2	Gene names	PHOX2A, ARIX, PMX2A
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (Aristaless homeobox protein homolog) (ARIX1 homeodomain protein).

HXA11_MOUSE
NC score	0.055092 (rank : 225)	θ value	θ > 10 (rank : 188)
Query Neighborhood Hits	127	Target Neighborhood Hits	327	Shared Neighborhood Hits	44
SwissProt Accessions	P31311, Q3V026	Gene names	Hoxa11, Hox-1.9, Hoxa-11
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1.9).

SHOX_HUMAN
NC score	0.054580 (rank : 226)	θ value	θ > 10 (rank : 295)
Query Neighborhood Hits	127	Target Neighborhood Hits	363	Shared Neighborhood Hits	56
SwissProt Accessions	O15266, O00412, O00413, O15267	Gene names	SHOX, PHOG
Domain Architecture
Description	Short stature homeobox protein (Short stature homeobox-containing protein) (Pseudoautosomal homeobox-containing osteogenic protein).

CART1_HUMAN
NC score	0.054316 (rank : 227)	θ value	θ > 10 (rank : 138)
Query Neighborhood Hits	127	Target Neighborhood Hits	348	Shared Neighborhood Hits	64
SwissProt Accessions	Q15699, Q546C8, Q96FH4	Gene names	CART1
Domain Architecture
Description	Cartilage homeoprotein 1 (CART-1).

TLX2_MOUSE
NC score	0.054299 (rank : 228)	θ value	θ > 10 (rank : 300)
Query Neighborhood Hits	127	Target Neighborhood Hits	336	Shared Neighborhood Hits	57
SwissProt Accessions	Q61663	Gene names	Tlx2, Hox11l1, Tlx1l1
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Homeobox TLX-2) (PMUR10F).

TLX2_HUMAN
NC score	0.054122 (rank : 229)	θ value	θ > 10 (rank : 299)
Query Neighborhood Hits	127	Target Neighborhood Hits	352	Shared Neighborhood Hits	57
SwissProt Accessions	O43763, Q9UQ48	Gene names	TLX2, HOX11L1, NCX
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Neural crest homeobox protein).

HESX1_HUMAN
NC score	0.054108 (rank : 230)	θ value	θ > 10 (rank : 171)
Query Neighborhood Hits	127	Target Neighborhood Hits	326	Shared Neighborhood Hits	51
SwissProt Accessions	Q9UBX0, Q99667	Gene names	HESX1, HANF
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (hAnf).

CDX1_MOUSE
NC score	0.053954 (rank : 231)	θ value	θ > 10 (rank : 141)
Query Neighborhood Hits	127	Target Neighborhood Hits	379	Shared Neighborhood Hits	50
SwissProt Accessions	P18111, Q8VCF7	Gene names	Cdx1, Cdx-1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

HXA11_HUMAN
NC score	0.053778 (rank : 232)	θ value	θ > 10 (rank : 187)
Query Neighborhood Hits	127	Target Neighborhood Hits	334	Shared Neighborhood Hits	44
SwissProt Accessions	P31270	Gene names	HOXA11, HOX1I
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1I).

HXA4_HUMAN
NC score	0.053519 (rank : 233)	θ value	θ > 10 (rank : 195)
Query Neighborhood Hits	127	Target Neighborhood Hits	370	Shared Neighborhood Hits	52
SwissProt Accessions	Q00056, O43366	Gene names	HOXA4, HOX1D
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4).

GSHI_MOUSE
NC score	0.053461 (rank : 234)	θ value	θ > 10 (rank : 170)
Query Neighborhood Hits	127	Target Neighborhood Hits	313	Shared Neighborhood Hits	53
SwissProt Accessions	P31315	Gene names	Gsh1, Gsh-1
Domain Architecture
Description	Homeobox protein GSH-1.

CDX1_HUMAN
NC score	0.053082 (rank : 235)	θ value	θ > 10 (rank : 140)
Query Neighborhood Hits	127	Target Neighborhood Hits	382	Shared Neighborhood Hits	49
SwissProt Accessions	P47902, Q4VAU4, Q9NYK8	Gene names	CDX1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

CART1_MOUSE
NC score	0.053021 (rank : 236)	θ value	θ > 10 (rank : 139)
Query Neighborhood Hits	127	Target Neighborhood Hits	344	Shared Neighborhood Hits	61
SwissProt Accessions	Q8C8B0, Q8C370	Gene names	Cart1
Domain Architecture	No domain graphic available
Description	Cartilage homeoprotein 1 (CART-1).

HMBX1_MOUSE
NC score	0.052467 (rank : 237)	θ value	θ > 10 (rank : 180)
Query Neighborhood Hits	127	Target Neighborhood Hits	117	Shared Neighborhood Hits	21
SwissProt Accessions	Q8BJA3, Q80WC2, Q8BWE7, Q99LV1	Gene names	Hmbox1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

ZFHX2_HUMAN
NC score	0.052443 (rank : 238)	θ value	θ > 10 (rank : 305)
Query Neighborhood Hits	127	Target Neighborhood Hits	1178	Shared Neighborhood Hits	69
SwissProt Accessions	Q9C0A1	Gene names	ZFHX2, KIAA1762
Domain Architecture
Description	Zinc finger homeobox protein 2.

TLX1_MOUSE
NC score	0.052237 (rank : 239)	θ value	θ > 10 (rank : 298)
Query Neighborhood Hits	127	Target Neighborhood Hits	347	Shared Neighborhood Hits	57
SwissProt Accessions	P43345	Gene names	Tlx1, Hox11, Tlx-1
Domain Architecture
Description	T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (Homeobox TLX-1).

BARH1_HUMAN
NC score	0.052216 (rank : 240)	θ value	θ > 10 (rank : 132)
Query Neighborhood Hits	127	Target Neighborhood Hits	373	Shared Neighborhood Hits	66
SwissProt Accessions	Q9BZE3, Q9NY88	Gene names	BARHL1
Domain Architecture
Description	BarH-like 1 homeobox protein.

MSX1_MOUSE
NC score	0.052181 (rank : 241)	θ value	θ > 10 (rank : 253)
Query Neighborhood Hits	127	Target Neighborhood Hits	322	Shared Neighborhood Hits	55
SwissProt Accessions	P13297	Gene names	Msx1, Hox7, Hox7.1
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7) (Hox- 7.1).

HXB3_MOUSE
NC score	0.052164 (rank : 242)	θ value	θ > 10 (rank : 208)
Query Neighborhood Hits	127	Target Neighborhood Hits	493	Shared Neighborhood Hits	63
SwissProt Accessions	P09026, P10285, Q4PJ06, Q61680	Gene names	Hoxb3, Hox-2.7, Hoxb-3
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2.7) (Homeobox protein MH-23).

VAX1_MOUSE
NC score	0.052139 (rank : 243)	θ value	θ > 10 (rank : 304)
Query Neighborhood Hits	127	Target Neighborhood Hits	351	Shared Neighborhood Hits	53
SwissProt Accessions	Q2NKI2, O88880	Gene names	Vax1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

VAX1_HUMAN
NC score	0.052068 (rank : 244)	θ value	θ > 10 (rank : 303)
Query Neighborhood Hits	127	Target Neighborhood Hits	355	Shared Neighborhood Hits	53
SwissProt Accessions	Q5SQQ9, Q6ZSX0	Gene names	VAX1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

GSHI_HUMAN
NC score	0.052041 (rank : 245)	θ value	θ > 10 (rank : 169)
Query Neighborhood Hits	127	Target Neighborhood Hits	314	Shared Neighborhood Hits	53
SwissProt Accessions	Q9H4S2	Gene names	GSH1
Domain Architecture
Description	Homeobox protein GSH-1.

NKX23_MOUSE
NC score	0.051942 (rank : 246)	θ value	θ > 10 (rank : 260)
Query Neighborhood Hits	127	Target Neighborhood Hits	340	Shared Neighborhood Hits	61
SwissProt Accessions	P97334, Q9QZ60, Q9WV67	Gene names	Nkx2-3, Nkx-2.3, Nkx2c
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NK-2 homolog C) (Nkx2-C) (Homeobox protein NK-2 homolog 3).

MSX1_HUMAN
NC score	0.051896 (rank : 247)	θ value	θ > 10 (rank : 252)
Query Neighborhood Hits	127	Target Neighborhood Hits	374	Shared Neighborhood Hits	55
SwissProt Accessions	P28360, Q96NY4	Gene names	MSX1, HOX7
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7).

NKX32_HUMAN
NC score	0.051895 (rank : 248)	θ value	θ > 10 (rank : 266)
Query Neighborhood Hits	127	Target Neighborhood Hits	323	Shared Neighborhood Hits	55
SwissProt Accessions	P78367	Gene names	BAPX1, NKX3B
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

LHX3_HUMAN
NC score	0.051866 (rank : 249)	θ value	θ > 10 (rank : 247)
Query Neighborhood Hits	127	Target Neighborhood Hits	474	Shared Neighborhood Hits	72
SwissProt Accessions	Q9UBR4, Q9NZB5, Q9P0I8, Q9P0I9	Gene names	LHX3
Domain Architecture
Description	LIM/homeobox protein Lhx3.

HXC5_HUMAN
NC score	0.051756 (rank : 250)	θ value	θ > 10 (rank : 222)
Query Neighborhood Hits	127	Target Neighborhood Hits	316	Shared Neighborhood Hits	47
SwissProt Accessions	Q00444	Gene names	HOXC5, HOX3D
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3D) (CP11).

HXD4_HUMAN
NC score	0.051749 (rank : 251)	θ value	θ > 10 (rank : 236)
Query Neighborhood Hits	127	Target Neighborhood Hits	337	Shared Neighborhood Hits	48
SwissProt Accessions	P09016, Q96AU0	Gene names	HOXD4, HOX4B
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4B) (Hox-5.1) (HHO.C13).

NKX32_MOUSE
NC score	0.051632 (rank : 252)	θ value	θ > 10 (rank : 267)
Query Neighborhood Hits	127	Target Neighborhood Hits	326	Shared Neighborhood Hits	55
SwissProt Accessions	P97503	Gene names	Bapx1, Nkx-3.2, Nkx3-2, Nkx3b
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

HXC5_MOUSE
NC score	0.051488 (rank : 253)	θ value	θ > 10 (rank : 223)
Query Neighborhood Hits	127	Target Neighborhood Hits	316	Shared Neighborhood Hits	47
SwissProt Accessions	P32043, Q8BJW4	Gene names	Hoxc5, Hox-3.4, Hoxc-5
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3.4) (Hox-6.2).

HMX3_MOUSE
NC score	0.051458 (rank : 254)	θ value	θ > 10 (rank : 186)
Query Neighborhood Hits	127	Target Neighborhood Hits	342	Shared Neighborhood Hits	56
SwissProt Accessions	P42581	Gene names	Hmx3, Nkx-5.1, Nkx5-1
Domain Architecture
Description	Homeobox protein HMX3 (Homeobox protein Nkx-5.1).

HXD12_HUMAN
NC score	0.051423 (rank : 255)	θ value	θ > 10 (rank : 230)
Query Neighborhood Hits	127	Target Neighborhood Hits	334	Shared Neighborhood Hits	46
SwissProt Accessions	P35452, Q9NS03	Gene names	HOXD12, HOX4H
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4H).

HXD4_MOUSE
NC score	0.051401 (rank : 256)	θ value	θ > 10 (rank : 237)
Query Neighborhood Hits	127	Target Neighborhood Hits	339	Shared Neighborhood Hits	48
SwissProt Accessions	P10628, P97451, Q3UXL6	Gene names	Hoxd4, Hox-4.2, Hoxd-4
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4.2) (Hox-5.1).

GSCL_MOUSE
NC score	0.051315 (rank : 257)	θ value	θ > 10 (rank : 164)
Query Neighborhood Hits	127	Target Neighborhood Hits	339	Shared Neighborhood Hits	52
SwissProt Accessions	P56916	Gene names	Gscl
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid-like (GSC-2).

HXD12_MOUSE
NC score	0.051176 (rank : 258)	θ value	θ > 10 (rank : 231)
Query Neighborhood Hits	127	Target Neighborhood Hits	370	Shared Neighborhood Hits	47
SwissProt Accessions	P23812	Gene names	Hoxd12, Hox-4.7, Hoxd-12
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4.7) (Hox-5.6).

HXB5_MOUSE
NC score	0.051171 (rank : 259)	θ value	θ > 10 (rank : 210)
Query Neighborhood Hits	127	Target Neighborhood Hits	337	Shared Neighborhood Hits	53
SwissProt Accessions	P09079, Q3ZAY8	Gene names	Hoxb5, Hox-2.1, Hoxb-5
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2.1) (MU-1) (H24.1).

HXB5_HUMAN
NC score	0.051150 (rank : 260)	θ value	θ > 10 (rank : 209)
Query Neighborhood Hits	127	Target Neighborhood Hits	332	Shared Neighborhood Hits	52
SwissProt Accessions	P09067, P09069	Gene names	HOXB5, HOX2A
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2A) (HHO.C10) (HU-1).

TLX3_HUMAN
NC score	0.050995 (rank : 261)	θ value	θ > 10 (rank : 301)
Query Neighborhood Hits	127	Target Neighborhood Hits	403	Shared Neighborhood Hits	60
SwissProt Accessions	O43711, Q96AD3	Gene names	TLX3, HOX11L2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox protein Hox-11L2).

GSCL_HUMAN
NC score	0.050911 (rank : 262)	θ value	θ > 10 (rank : 163)
Query Neighborhood Hits	127	Target Neighborhood Hits	343	Shared Neighborhood Hits	52
SwissProt Accessions	O15499	Gene names	GSCL
Domain Architecture
Description	Homeobox protein goosecoid-like (GSC-2).

ISL2_MOUSE
NC score	0.050640 (rank : 263)	θ value	θ > 10 (rank : 244)
Query Neighborhood Hits	127	Target Neighborhood Hits	426	Shared Neighborhood Hits	54
SwissProt Accessions	Q9CXV0	Gene names	Isl2
Domain Architecture
Description	Insulin gene enhancer protein ISL-2 (Islet-2).

BARH2_HUMAN
NC score	0.050467 (rank : 264)	θ value	θ > 10 (rank : 133)
Query Neighborhood Hits	127	Target Neighborhood Hits	419	Shared Neighborhood Hits	63
SwissProt Accessions	Q9NY43, Q7Z4N7	Gene names	BARHL2
Domain Architecture
Description	BarH-like 2 homeobox protein.

BARH2_MOUSE
NC score	0.050320 (rank : 265)	θ value	θ > 10 (rank : 134)
Query Neighborhood Hits	127	Target Neighborhood Hits	397	Shared Neighborhood Hits	63
SwissProt Accessions	Q8VIB5, Q66L43	Gene names	Barhl2, Barh1, Mbh1
Domain Architecture	No domain graphic available
Description	BarH-like 2 homeobox protein (Bar-class homeodomain protein MBH1) (Homeobox protein B-H1).

CRX_HUMAN
NC score	0.050252 (rank : 266)	θ value	θ > 10 (rank : 144)
Query Neighborhood Hits	127	Target Neighborhood Hits	360	Shared Neighborhood Hits	58
SwissProt Accessions	O43186	Gene names	CRX, CORD2
Domain Architecture
Description	Cone-rod homeobox protein.

BORG1_HUMAN
NC score	0.039886 (rank : 267)	θ value	2.36792 (rank : 83)
Query Neighborhood Hits	127	Target Neighborhood Hits	67	Shared Neighborhood Hits	6
SwissProt Accessions	O14613, Q9UNS0	Gene names	CDC42EP2, BORG1, CEP2
Domain Architecture	No domain graphic available
Description	Cdc42 effector protein 2 (Binder of Rho GTPases 1).

AUTS2_HUMAN
NC score	0.030755 (rank : 268)	θ value	3.0926 (rank : 87)
Query Neighborhood Hits	127	Target Neighborhood Hits	342	Shared Neighborhood Hits	10
SwissProt Accessions	Q8WXX7, Q9Y4F2	Gene names	AUTS2, KIAA0442
Domain Architecture	No domain graphic available
Description	Autism susceptibility gene 2 protein.

TNC6B_HUMAN
NC score	0.029210 (rank : 269)	θ value	1.06291 (rank : 71)
Query Neighborhood Hits	127	Target Neighborhood Hits	256	Shared Neighborhood Hits	7
SwissProt Accessions	Q9UPQ9, Q5TH52, Q8TBX2	Gene names	TNRC6B, KIAA1093
Domain Architecture
Description	Trinucleotide repeat-containing 6B protein.

SF01_HUMAN
NC score	0.028604 (rank : 270)	θ value	1.06291 (rank : 70)
Query Neighborhood Hits	127	Target Neighborhood Hits	287	Shared Neighborhood Hits	8
SwissProt Accessions	Q15637, Q14818, Q14819, Q15913, Q8IY00, Q92744, Q92745, Q969H7, Q9BW01, Q9UEI0	Gene names	SF1, ZFM1, ZNF162
Domain Architecture
Description	Splicing factor 1 (Zinc finger protein 162) (Transcription factor ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian branch point-binding protein mBBP) (BBP).

MAML1_HUMAN
NC score	0.028541 (rank : 271)	θ value	2.36792 (rank : 86)
Query Neighborhood Hits	127	Target Neighborhood Hits	228	Shared Neighborhood Hits	12
SwissProt Accessions	Q92585, Q9NZ12	Gene names	MAML1, KIAA0200
Domain Architecture	No domain graphic available
Description	Mastermind-like protein 1 (Mam-1).

CLPT1_HUMAN
NC score	0.027049 (rank : 272)	θ value	1.06291 (rank : 67)
Query Neighborhood Hits	127	Target Neighborhood Hits	15	Shared Neighborhood Hits	2
SwissProt Accessions	O96005, Q53ET6, Q9BSS5	Gene names	CLPTM1
Domain Architecture	No domain graphic available
Description	Cleft lip and palate transmembrane protein 1.

MAML3_HUMAN
NC score	0.024266 (rank : 273)	θ value	3.0926 (rank : 88)
Query Neighborhood Hits	127	Target Neighborhood Hits	323	Shared Neighborhood Hits	13
SwissProt Accessions	Q96JK9	Gene names	MAML3, KIAA1816
Domain Architecture	No domain graphic available
Description	Mastermind-like protein 3 (Mam-3).

RD23B_MOUSE
NC score	0.020656 (rank : 274)	θ value	1.81305 (rank : 79)
Query Neighborhood Hits	127	Target Neighborhood Hits	189	Shared Neighborhood Hits	5
SwissProt Accessions	P54728	Gene names	Rad23b, Mhr23b
Domain Architecture
Description	UV excision repair protein RAD23 homolog B (mHR23B) (XP-C repair- complementing complex 58 kDa protein) (p58).

SELV_HUMAN
NC score	0.019857 (rank : 275)	θ value	3.0926 (rank : 90)
Query Neighborhood Hits	127	Target Neighborhood Hits	118	Shared Neighborhood Hits	3
SwissProt Accessions	P59797	Gene names	SELV
Domain Architecture	No domain graphic available
Description	Selenoprotein V.

MBD6_HUMAN
NC score	0.019711 (rank : 276)	θ value	1.81305 (rank : 78)
Query Neighborhood Hits	127	Target Neighborhood Hits	349	Shared Neighborhood Hits	9
SwissProt Accessions	Q96DN6, Q8N3M0, Q8NA81, Q96Q00	Gene names	MBD6, KIAA1887
Domain Architecture	No domain graphic available
Description	Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding protein MBD6).

CK024_MOUSE
NC score	0.018462 (rank : 277)	θ value	5.27518 (rank : 100)
Query Neighborhood Hits	127	Target Neighborhood Hits	307	Shared Neighborhood Hits	14
SwissProt Accessions	Q9D8N1, Q8VCP2	Gene names
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C11orf24 homolog precursor.

TAF4_HUMAN
NC score	0.017839 (rank : 278)	θ value	4.03905 (rank : 98)
Query Neighborhood Hits	127	Target Neighborhood Hits	687	Shared Neighborhood Hits	18
SwissProt Accessions	O00268, Q5TBP6, Q99721, Q9BR40, Q9BX42	Gene names	TAF4, TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135
Domain Architecture
Description	Transcription initiation factor TFIID subunit 4 (TBP-associated factor 4) (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130).

CDT1_MOUSE
NC score	0.017063 (rank : 279)	θ value	4.03905 (rank : 92)
Query Neighborhood Hits	127	Target Neighborhood Hits	72	Shared Neighborhood Hits	3
SwissProt Accessions	Q8R4E9, Q8BUQ1, Q8BX29, Q8R3V0, Q8R4E8	Gene names	Cdt1, Ris2
Domain Architecture	No domain graphic available
Description	DNA replication factor Cdt1 (Double parked homolog) (DUP) (Retroviral insertion site 2 protein).

EVI2B_MOUSE
NC score	0.016369 (rank : 280)	θ value	5.27518 (rank : 102)
Query Neighborhood Hits	127	Target Neighborhood Hits	87	Shared Neighborhood Hits	5
SwissProt Accessions	Q8VD58, Q3U1A3	Gene names	Evi2b
Domain Architecture	No domain graphic available
Description	EVI2B protein precursor (Ecotropic viral integration site 2B protein).

ATN1_HUMAN
NC score	0.015823 (rank : 281)	θ value	2.36792 (rank : 82)
Query Neighborhood Hits	127	Target Neighborhood Hits	676	Shared Neighborhood Hits	9
SwissProt Accessions	P54259, Q99495, Q99621, Q9UEK7	Gene names	ATN1, DRPLA
Domain Architecture
Description	Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein).

RD23B_HUMAN
NC score	0.015552 (rank : 282)	θ value	8.99809 (rank : 126)
Query Neighborhood Hits	127	Target Neighborhood Hits	115	Shared Neighborhood Hits	4
SwissProt Accessions	P54727, Q8WUB0	Gene names	RAD23B
Domain Architecture
Description	UV excision repair protein RAD23 homolog B (hHR23B) (XP-C repair- complementing complex 58 kDa protein) (p58).

ACINU_HUMAN
NC score	0.015459 (rank : 283)	θ value	4.03905 (rank : 91)
Query Neighborhood Hits	127	Target Neighborhood Hits	828	Shared Neighborhood Hits	17
SwissProt Accessions	Q9UKV3, O75158, Q9UG91, Q9UKV1, Q9UKV2	Gene names	ACIN1, ACINUS, KIAA0670
Domain Architecture
Description	Apoptotic chromatin condensation inducer in the nucleus (Acinus).

CBP_MOUSE
NC score	0.015257 (rank : 284)	θ value	5.27518 (rank : 99)
Query Neighborhood Hits	127	Target Neighborhood Hits	1051	Shared Neighborhood Hits	36
SwissProt Accessions	P45481	Gene names	Crebbp, Cbp
Domain Architecture
Description	CREB-binding protein (EC 2.3.1.48).

MLL2_HUMAN
NC score	0.014542 (rank : 285)	θ value	5.27518 (rank : 109)
Query Neighborhood Hits	127	Target Neighborhood Hits	1788	Shared Neighborhood Hits	34
SwissProt Accessions	O14686, O14687	Gene names	MLL2, ALR
Domain Architecture
Description	Myeloid/lymphoid or mixed-lineage leukemia protein 2 (ALL1-related protein).

MUC2_HUMAN
NC score	0.013940 (rank : 286)	θ value	6.88961 (rank : 115)
Query Neighborhood Hits	127	Target Neighborhood Hits	906	Shared Neighborhood Hits	22
SwissProt Accessions	Q02817, Q14878	Gene names	MUC2, SMUC
Domain Architecture
Description	Mucin-2 precursor (Intestinal mucin-2).

GORS2_MOUSE
NC score	0.013189 (rank : 287)	θ value	4.03905 (rank : 93)
Query Neighborhood Hits	127	Target Neighborhood Hits	89	Shared Neighborhood Hits	5
SwissProt Accessions	Q99JX3, Q3U9D2, Q8CCD0, Q91W68	Gene names	Gorasp2
Domain Architecture	No domain graphic available
Description	Golgi reassembly-stacking protein 2 (GRS2) (Golgi reassembly-stacking protein of 55 kDa) (GRASP55).

S4A7_HUMAN
NC score	0.011920 (rank : 288)	θ value	1.06291 (rank : 69)
Query Neighborhood Hits	127	Target Neighborhood Hits	55	Shared Neighborhood Hits	3
SwissProt Accessions	Q9Y6M7, O60350, Q6AHZ9, Q9HC88, Q9UIB9	Gene names	SLC4A7, BT, NBC2, NBC2B, NBC3, SBC2, SLC4A6
Domain Architecture	No domain graphic available
Description	Sodium bicarbonate cotransporter 3 (Sodium bicarbonate cotransporter 2) (Sodium bicarbonate cotransporter 2b) (Bicarbonate transporter) (Solute carrier family 4 member 7).

MCL1_MOUSE
NC score	0.010495 (rank : 289)	θ value	6.88961 (rank : 114)
Query Neighborhood Hits	127	Target Neighborhood Hits	27	Shared Neighborhood Hits	2
SwissProt Accessions	P97287, Q3TUS0, Q792P0, Q9CRI4	Gene names	Mcl1
Domain Architecture	No domain graphic available
Description	Induced myeloid leukemia cell differentiation protein Mcl-1 homolog (Bcl-2-related protein EAT/mcl1).

MUC1_MOUSE
NC score	0.010162 (rank : 290)	θ value	8.99809 (rank : 124)
Query Neighborhood Hits	127	Target Neighborhood Hits	388	Shared Neighborhood Hits	16
SwissProt Accessions	Q02496	Gene names	Muc1, Muc-1
Domain Architecture
Description	Mucin-1 precursor (Polymorphic epithelial mucin) (PEMT) (Episialin).

CNKR2_HUMAN
NC score	0.010080 (rank : 291)	θ value	8.99809 (rank : 118)
Query Neighborhood Hits	127	Target Neighborhood Hits	197	Shared Neighborhood Hits	3
SwissProt Accessions	Q8WXI2, O94976, Q8WXI1	Gene names	CNKSR2, CNK2, KIAA0902, KSR2
Domain Architecture	No domain graphic available
Description	Connector enhancer of kinase suppressor of ras 2 (Connector enhancer of KSR2) (CNK2).

CNKR2_MOUSE
NC score	0.010079 (rank : 292)	θ value	8.99809 (rank : 119)
Query Neighborhood Hits	127	Target Neighborhood Hits	197	Shared Neighborhood Hits	3
SwissProt Accessions	Q80YA9, Q80TP2	Gene names	Cnksr2, Kiaa0902
Domain Architecture	No domain graphic available
Description	Connector enhancer of kinase suppressor of ras 2 (Connector enhancer of KSR2) (CNK2).

RANB9_HUMAN
NC score	0.009677 (rank : 293)	θ value	6.88961 (rank : 116)
Query Neighborhood Hits	127	Target Neighborhood Hits	179	Shared Neighborhood Hits	5
SwissProt Accessions	Q96S59, O94764, Q6P3T7, Q7LBR2, Q7Z7F9	Gene names	RANBP9, RANBPM
Domain Architecture	No domain graphic available
Description	Ran-binding protein 9 (RanBP9) (RanBP7) (Ran-binding protein M) (RanBPM) (BPM90) (BPM-L).

LZTS2_MOUSE
NC score	0.009468 (rank : 294)	θ value	8.99809 (rank : 122)
Query Neighborhood Hits	127	Target Neighborhood Hits	423	Shared Neighborhood Hits	6
SwissProt Accessions	Q91YU6, Q569X6	Gene names	Lzts2, Kiaa1813
Domain Architecture
Description	Leucine zipper putative tumor suppressor 2.

MINT_HUMAN
NC score	0.008828 (rank : 295)	θ value	5.27518 (rank : 108)
Query Neighborhood Hits	127	Target Neighborhood Hits	1291	Shared Neighborhood Hits	18
SwissProt Accessions	Q96T58, Q9H9A8, Q9NWH5, Q9UQ01, Q9Y556	Gene names	SPEN, KIAA0929, MINT, SHARP
Domain Architecture
Description	Msx2-interacting protein (SPEN homolog) (SMART/HDAC1-associated repressor protein).

ABI2_HUMAN
NC score	0.008809 (rank : 296)	θ value	2.36792 (rank : 81)
Query Neighborhood Hits	127	Target Neighborhood Hits	350	Shared Neighborhood Hits	6
SwissProt Accessions	Q9NYB9, Q13147, Q13249, Q13801, Q9BV70	Gene names	ABI2, ARGBPIA
Domain Architecture	No domain graphic available
Description	Abl interactor 2 (Abelson interactor 2) (Abi-2) (Abl-binding protein 3) (AblBP3) (Arg-binding protein 1) (ArgBP1).

BCL3_HUMAN
NC score	0.008092 (rank : 297)	θ value	1.06291 (rank : 66)
Query Neighborhood Hits	127	Target Neighborhood Hits	324	Shared Neighborhood Hits	5
SwissProt Accessions	P20749	Gene names	BCL3
Domain Architecture
Description	B-cell lymphoma 3-encoded protein (Protein Bcl-3).

RXRB_HUMAN
NC score	0.007754 (rank : 298)	θ value	0.279714 (rank : 56)
Query Neighborhood Hits	127	Target Neighborhood Hits	280	Shared Neighborhood Hits	6
SwissProt Accessions	P28702, P28703	Gene names	RXRB, NR2B2
Domain Architecture
Description	Retinoic acid receptor RXR-beta (Retinoid X receptor beta).

DDEF1_MOUSE
NC score	0.007710 (rank : 299)	θ value	2.36792 (rank : 84)
Query Neighborhood Hits	127	Target Neighborhood Hits	592	Shared Neighborhood Hits	9
SwissProt Accessions	Q9QWY8, O08612, Q80TG8, Q80UV6, Q99LV8, Q9Z2B6	Gene names	Ddef1, Asap1, Kiaa1249, Shag1
Domain Architecture
Description	130 kDa phosphatidylinositol 4,5-biphosphate-dependent ARF1 GTPase- activating protein (PIP2-dependent ARF1 GAP) (ADP-ribosylation factor- directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differentiation-enhancing factor 1) (Differentiation-enhancing factor 1) (DEF-1).

FMN2_MOUSE
NC score	0.006912 (rank : 300)	θ value	8.99809 (rank : 121)
Query Neighborhood Hits	127	Target Neighborhood Hits	349	Shared Neighborhood Hits	11
SwissProt Accessions	Q9JL04	Gene names	Fmn2
Domain Architecture
Description	Formin-2.

SYN1_MOUSE
NC score	0.006835 (rank : 301)	θ value	6.88961 (rank : 117)
Query Neighborhood Hits	127	Target Neighborhood Hits	363	Shared Neighborhood Hits	10
SwissProt Accessions	O88935, Q62279, Q8QZT8	Gene names	Syn1, Syn-1
Domain Architecture
Description	Synapsin-1 (Synapsin I).

FMNL_MOUSE
NC score	0.006621 (rank : 302)	θ value	6.88961 (rank : 113)
Query Neighborhood Hits	127	Target Neighborhood Hits	428	Shared Neighborhood Hits	7
SwissProt Accessions	Q9JL26, Q6KAN4, Q9Z2V7	Gene names	Fmnl1, Frl
Domain Architecture	No domain graphic available
Description	Formin-like protein 1 (Formin-related protein).

MYPN_MOUSE
NC score	0.005983 (rank : 303)	θ value	3.0926 (rank : 89)
Query Neighborhood Hits	127	Target Neighborhood Hits	421	Shared Neighborhood Hits	8
SwissProt Accessions	Q5DTJ9, Q7TPW5, Q8BZ76	Gene names	Mypn, Kiaa4170
Domain Architecture	No domain graphic available
Description	Myopalladin.

MYO15_MOUSE
NC score	0.004017 (rank : 304)	θ value	8.99809 (rank : 125)
Query Neighborhood Hits	127	Target Neighborhood Hits	467	Shared Neighborhood Hits	18
SwissProt Accessions	Q9QZZ4, O70395, Q9QWL6	Gene names	Myo15a, Myo15
Domain Architecture
Description	Myosin-15 (Myosin XV) (Unconventional myosin-15).

WNK4_MOUSE
NC score	0.002984 (rank : 305)	θ value	0.0736092 (rank : 51)
Query Neighborhood Hits	127	Target Neighborhood Hits	961	Shared Neighborhood Hits	6
SwissProt Accessions	Q80UE6, Q4VAC1, Q80XB5, Q80XN2, Q8R0N0, Q8R340	Gene names	Wnk4, Prkwnk4
Domain Architecture
Description	Serine/threonine-protein kinase WNK4 (EC 2.7.11.1) (Protein kinase with no lysine 4) (Protein kinase, lysine-deficient 4).

ROBO4_MOUSE
NC score	0.002517 (rank : 306)	θ value	8.99809 (rank : 127)
Query Neighborhood Hits	127	Target Neighborhood Hits	358	Shared Neighborhood Hits	5
SwissProt Accessions	Q8C310, Q9DBW1	Gene names	Robo4
Domain Architecture
Description	Roundabout homolog 4 precursor.

MGR1_HUMAN
NC score	0.002432 (rank : 307)	θ value	8.99809 (rank : 123)
Query Neighborhood Hits	127	Target Neighborhood Hits	85	Shared Neighborhood Hits	2
SwissProt Accessions	Q13255, Q13256, Q14757, Q14758, Q5VTF7, Q5VTF8, Q9NU10, Q9UGS9, Q9UGT0	Gene names	GRM1, GPRC1A, MGLUR1
Domain Architecture
Description	Metabotropic glutamate receptor 1 precursor (mGluR1).

SREC2_MOUSE
NC score	0.001138 (rank : 308)	θ value	4.03905 (rank : 97)
Query Neighborhood Hits	127	Target Neighborhood Hits	605	Shared Neighborhood Hits	5
SwissProt Accessions	P59222	Gene names	Scarf2, Srec2
Domain Architecture	No domain graphic available
Description	Scavenger receptor class F member 2 precursor (Scavenger receptor expressed by endothelial cells 2 protein) (SREC-II).

AAK1_MOUSE
NC score	-0.002045 (rank : 309)	θ value	6.88961 (rank : 112)
Query Neighborhood Hits	127	Target Neighborhood Hits	1051	Shared Neighborhood Hits	17
SwissProt Accessions	Q3UHJ0, Q3TY53, Q6ZPZ6, Q80XP6	Gene names	Aak1, Kiaa1048
Domain Architecture	No domain graphic available
Description	AP2-associated protein kinase 1 (EC 2.7.11.1) (Adaptor-associated kinase 1).