Please be patient as the page loads

Stop Image Loading/Displaying

Network neighborhood for query Sequence : TFAM_MOUSE

For an explanation of this page, click here

TFAM_MOUSE
SwissProt Accessions	P40630, P97894, P97906, Q543I8, Q9DBM9	Gene names	Tfam, Hmgts
Domain Architecture
Description	Transcription factor A, mitochondrial precursor (mtTFA) (Testis- specific high mobility group protein) (TS-HMG).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

TFAM_MOUSE
θ value	4.45295e-124 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	93	Target Neighborhood Hits	93	Shared Neighborhood Hits	93
SwissProt Accessions	P40630, P97894, P97906, Q543I8, Q9DBM9	Gene names	Tfam, Hmgts
Domain Architecture
Description	Transcription factor A, mitochondrial precursor (mtTFA) (Testis- specific high mobility group protein) (TS-HMG).

TFAM_HUMAN
θ value	2.16048e-86 (rank : 2)	NC score	0.927420 (rank : 2)
Query Neighborhood Hits	93	Target Neighborhood Hits	156	Shared Neighborhood Hits	65
SwissProt Accessions	Q00059	Gene names	TFAM, TCF6L2
Domain Architecture
Description	Transcription factor A, mitochondrial precursor (mtTFA) (Mitochondrial transcription factor 1) (MtTF1) (Transcription factor 6-like 2).

UBF1_HUMAN
θ value	2.52405e-10 (rank : 3)	NC score	0.565837 (rank : 14)
Query Neighborhood Hits	93	Target Neighborhood Hits	415	Shared Neighborhood Hits	78
SwissProt Accessions	P17480	Gene names	UBTF, UBF, UBF1
Domain Architecture
Description	Nucleolar transcription factor 1 (Upstream-binding factor 1) (UBF-1) (Autoantigen NOR-90).

UBF1_MOUSE
θ value	5.62301e-10 (rank : 4)	NC score	0.556791 (rank : 15)
Query Neighborhood Hits	93	Target Neighborhood Hits	419	Shared Neighborhood Hits	78
SwissProt Accessions	P25976	Gene names	Ubtf, Tcfubf, Ubf-1, Ubf1
Domain Architecture
Description	Nucleolar transcription factor 1 (Upstream-binding factor 1) (UBF-1).

SMCE1_HUMAN
θ value	1.17247e-07 (rank : 5)	NC score	0.527425 (rank : 22)
Query Neighborhood Hits	93	Target Neighborhood Hits	272	Shared Neighborhood Hits	67
SwissProt Accessions	Q969G3, O43539	Gene names	SMARCE1, BAF57
Domain Architecture	No domain graphic available
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 (BRG1-associated factor 57).

SMCE1_MOUSE
θ value	1.17247e-07 (rank : 6)	NC score	0.500495 (rank : 23)
Query Neighborhood Hits	93	Target Neighborhood Hits	409	Shared Neighborhood Hits	68
SwissProt Accessions	O54941, Q8BPD9	Gene names	Smarce1, Baf57
Domain Architecture	No domain graphic available
Description	SWI/SNF-related matrix-associated actin-dependent regulator chromatin subfamily E member 1 (BRG1-associated factor 57).

SP100_HUMAN
θ value	5.81887e-07 (rank : 7)	NC score	0.496718 (rank : 24)
Query Neighborhood Hits	93	Target Neighborhood Hits	117	Shared Neighborhood Hits	67
SwissProt Accessions	P23497, O75450, Q13343, Q96F70, Q96T24, Q96T95, Q9NP33, Q9UE32	Gene names	SP100
Domain Architecture
Description	Nuclear autoantigen Sp-100 (Speckled 100 kDa) (Nuclear dot-associated Sp100 protein) (Lysp100b).

HMGB1_HUMAN
θ value	7.59969e-07 (rank : 8)	NC score	0.625013 (rank : 4)
Query Neighborhood Hits	93	Target Neighborhood Hits	126	Shared Neighborhood Hits	76
SwissProt Accessions	P09429, Q6IBE1	Gene names	HMGB1, HMG1
Domain Architecture
Description	High mobility group protein B1 (High mobility group protein 1) (HMG- 1).

HMGB1_MOUSE
θ value	7.59969e-07 (rank : 9)	NC score	0.625260 (rank : 3)
Query Neighborhood Hits	93	Target Neighborhood Hits	123	Shared Neighborhood Hits	76
SwissProt Accessions	P63158, P07155, P27109, P27428	Gene names	Hmgb1, Hmg-1, Hmg1
Domain Architecture	No domain graphic available
Description	High mobility group protein B1 (High mobility group protein 1) (HMG- 1).

CN092_HUMAN
θ value	2.21117e-06 (rank : 10)	NC score	0.548937 (rank : 18)
Query Neighborhood Hits	93	Target Neighborhood Hits	143	Shared Neighborhood Hits	64
SwissProt Accessions	O94842	Gene names	C14orf92, KIAA0737
Domain Architecture
Description	Epidermal Langerhans cell protein LCP1.

CN092_MOUSE
θ value	2.21117e-06 (rank : 11)	NC score	0.538153 (rank : 19)
Query Neighborhood Hits	93	Target Neighborhood Hits	206	Shared Neighborhood Hits	65
SwissProt Accessions	Q8BU11, Q80UI2, Q99PN9, Q9CS16	Gene names
Domain Architecture
Description	Epidermal Langerhans cell protein LCP1.

HMGB2_HUMAN
θ value	4.92598e-06 (rank : 12)	NC score	0.619318 (rank : 6)
Query Neighborhood Hits	93	Target Neighborhood Hits	114	Shared Neighborhood Hits	80
SwissProt Accessions	P26583	Gene names	HMGB2, HMG2
Domain Architecture
Description	High mobility group protein B2 (High mobility group protein 2) (HMG- 2).

HMGB2_MOUSE
θ value	8.40245e-06 (rank : 13)	NC score	0.616094 (rank : 8)
Query Neighborhood Hits	93	Target Neighborhood Hits	111	Shared Neighborhood Hits	78
SwissProt Accessions	P30681, Q3UXT1, Q9EQD5	Gene names	Hmgb2, Hmg2
Domain Architecture
Description	High mobility group protein B2 (High mobility group protein 2) (HMG- 2).

SSRP1_HUMAN
θ value	8.40245e-06 (rank : 14)	NC score	0.570974 (rank : 12)
Query Neighborhood Hits	93	Target Neighborhood Hits	187	Shared Neighborhood Hits	78
SwissProt Accessions	Q08945, Q5BJG8	Gene names	SSRP1, FACT80
Domain Architecture
Description	FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (FACT 80 kDa subunit) (FACTp80) (Chromatin- specific transcription elongation factor 80 kDa subunit) (Structure- specific recognition protein 1) (hSSRP1) (Recombination signal sequence recognition protein 1) (T160).

SSRP1_MOUSE
θ value	1.09739e-05 (rank : 15)	NC score	0.567644 (rank : 13)
Query Neighborhood Hits	93	Target Neighborhood Hits	193	Shared Neighborhood Hits	78
SwissProt Accessions	Q08943, Q3U9Z2, Q3UJ75, Q4V9U4, Q8CGA6	Gene names	Ssrp1
Domain Architecture
Description	FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Structure-specific recognition protein 1) (Recombination signal sequence recognition protein 1) (T160).

HM20B_MOUSE
θ value	1.43324e-05 (rank : 16)	NC score	0.610220 (rank : 10)
Query Neighborhood Hits	93	Target Neighborhood Hits	122	Shared Neighborhood Hits	76
SwissProt Accessions	Q9Z104, Q9NSF7, Q9NSF8	Gene names	Hmg20b, Braf35, Hmgx2, Smarce1r
Domain Architecture	No domain graphic available
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (SMARCE1-related protein) (HMG domain protein HMG20B) (Structural DNA-binding protein BRAF35) (BRCA2- associated factor 35).

HM20A_HUMAN
θ value	1.87187e-05 (rank : 17)	NC score	0.551312 (rank : 16)
Query Neighborhood Hits	93	Target Neighborhood Hits	343	Shared Neighborhood Hits	76
SwissProt Accessions	Q9NP66, Q53G31, Q9NSF6	Gene names	HMG20A, HMGX1
Domain Architecture	No domain graphic available
Description	High mobility group protein 20A (HMG box-containing protein 20A) (HMG domain-containing protein HMGX1).

HM20A_MOUSE
θ value	1.87187e-05 (rank : 18)	NC score	0.550272 (rank : 17)
Query Neighborhood Hits	93	Target Neighborhood Hits	348	Shared Neighborhood Hits	76
SwissProt Accessions	Q9DC33, Q3LSF9, Q6NV87, Q8BSK1, Q8C3C1, Q8CAA0, Q9CYG2	Gene names	Hmg20a, Ibraf
Domain Architecture	No domain graphic available
Description	High mobility group protein 20A (HMG box-containing protein 20A) (iBRAF) (Inhibitor of BRAF35) (HMG domain protein HMGX1).

HM20B_HUMAN
θ value	1.87187e-05 (rank : 19)	NC score	0.612231 (rank : 9)
Query Neighborhood Hits	93	Target Neighborhood Hits	126	Shared Neighborhood Hits	76
SwissProt Accessions	Q9P0W2, Q6IBP8, Q8NBD5, Q9HD21, Q9Y491, Q9Y4A2	Gene names	HMG20B, BRAF35, HMGX2, SMARCE1R
Domain Architecture	No domain graphic available
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (SMARCE1-related protein) (HMG domain protein HMG20B) (Structural DNA-binding protein BRAF35) (BRCA2- associated factor 35) (Sox-like transcriptional factor).

HMGB3_MOUSE
θ value	1.87187e-05 (rank : 20)	NC score	0.619413 (rank : 5)
Query Neighborhood Hits	93	Target Neighborhood Hits	88	Shared Neighborhood Hits	74
SwissProt Accessions	O54879	Gene names	Hmgb3, Hmg2a, Hmg4
Domain Architecture
Description	High mobility group protein B3 (High mobility group protein 4) (HMG-4) (High mobility group protein 2a) (HMG-2a).

HMGB3_HUMAN
θ value	2.44474e-05 (rank : 21)	NC score	0.616844 (rank : 7)
Query Neighborhood Hits	93	Target Neighborhood Hits	86	Shared Neighborhood Hits	74
SwissProt Accessions	O15347, O95556, Q6NS40	Gene names	HMGB3, HMG2A, HMG4
Domain Architecture
Description	High mobility group protein B3 (High mobility group protein 4) (HMG-4) (High mobility group protein 2a) (HMG-2a).

TOX_HUMAN
θ value	2.44474e-05 (rank : 22)	NC score	0.531505 (rank : 21)
Query Neighborhood Hits	93	Target Neighborhood Hits	106	Shared Neighborhood Hits	55
SwissProt Accessions	O94900, Q96AV5	Gene names	TOX, KIAA0808
Domain Architecture	No domain graphic available
Description	Thymus high mobility group box protein TOX.

TOX_MOUSE
θ value	2.44474e-05 (rank : 23)	NC score	0.534580 (rank : 20)
Query Neighborhood Hits	93	Target Neighborhood Hits	95	Shared Neighborhood Hits	54
SwissProt Accessions	Q66JW3, Q8BKH9, Q8BYQ5, Q8R4H0	Gene names	Tox
Domain Architecture	No domain graphic available
Description	Thymus high mobility group box protein TOX.

PB1_HUMAN
θ value	5.44631e-05 (rank : 24)	NC score	0.346967 (rank : 45)
Query Neighborhood Hits	93	Target Neighborhood Hits	261	Shared Neighborhood Hits	77
SwissProt Accessions	Q86U86, Q9H2T3, Q9H2T4, Q9H2T5, Q9H301, Q9H314	Gene names	PB1
Domain Architecture	No domain graphic available
Description	Protein polybromo-1 (hPB1) (Polybromo-1D) (BRG1-associated factor 180) (BAF180).

HM2L1_HUMAN
θ value	0.000461057 (rank : 25)	NC score	0.485618 (rank : 25)
Query Neighborhood Hits	93	Target Neighborhood Hits	130	Shared Neighborhood Hits	72
SwissProt Accessions	Q9UGU5, O75672, O75673, Q9UMT5	Gene names	HMG2L1, HMGBCG
Domain Architecture
Description	High mobility group protein 2-like 1 (Protein HMGBCG).

HMG1X_HUMAN
θ value	0.000602161 (rank : 26)	NC score	0.597268 (rank : 11)
Query Neighborhood Hits	93	Target Neighborhood Hits	97	Shared Neighborhood Hits	72
SwissProt Accessions	Q9UGV6	Gene names	HMG1L10
Domain Architecture
Description	High mobility group protein 1-like 10 (HMG-1L10).

PMS1_HUMAN
θ value	0.00102713 (rank : 27)	NC score	0.333123 (rank : 56)
Query Neighborhood Hits	93	Target Neighborhood Hits	126	Shared Neighborhood Hits	65
SwissProt Accessions	P54277	Gene names	PMS1, PMSL1
Domain Architecture
Description	PMS1 protein homolog 1 (DNA mismatch repair protein PMS1).

SOX14_HUMAN
θ value	0.0148317 (rank : 28)	NC score	0.389210 (rank : 28)
Query Neighborhood Hits	93	Target Neighborhood Hits	102	Shared Neighborhood Hits	78
SwissProt Accessions	O95416, Q3KPH7	Gene names	SOX14, SOX28
Domain Architecture
Description	Transcription factor SOX-14.

SOX14_MOUSE
θ value	0.0148317 (rank : 29)	NC score	0.389235 (rank : 27)
Query Neighborhood Hits	93	Target Neighborhood Hits	100	Shared Neighborhood Hits	78
SwissProt Accessions	Q04892, Q9JLC9, Q9JLD0, Q9QXU4	Gene names	Sox14, Sox-14
Domain Architecture
Description	Transcription factor SOX-14.

SRY_MOUSE
θ value	0.0148317 (rank : 30)	NC score	0.375181 (rank : 30)
Query Neighborhood Hits	93	Target Neighborhood Hits	139	Shared Neighborhood Hits	78
SwissProt Accessions	Q05738	Gene names	Sry, Tdf, Tdy
Domain Architecture
Description	Sex-determining region Y protein (Testis-determining factor).

ALMS1_HUMAN
θ value	0.0252991 (rank : 31)	NC score	0.087373 (rank : 83)
Query Neighborhood Hits	93	Target Neighborhood Hits	356	Shared Neighborhood Hits	13
SwissProt Accessions	Q8TCU4, Q53S05, Q580Q8, Q86VP9, Q9Y4G4	Gene names	ALMS1, KIAA0328
Domain Architecture	No domain graphic available
Description	Alstrom syndrome protein 1.

SRY_HUMAN
θ value	0.0330416 (rank : 32)	NC score	0.382318 (rank : 29)
Query Neighborhood Hits	93	Target Neighborhood Hits	83	Shared Neighborhood Hits	78
SwissProt Accessions	Q05066	Gene names	SRY, TDF
Domain Architecture
Description	Sex-determining region Y protein (Testis-determining factor).

SOX1_HUMAN
θ value	0.0961366 (rank : 33)	NC score	0.360463 (rank : 40)
Query Neighborhood Hits	93	Target Neighborhood Hits	90	Shared Neighborhood Hits	78
SwissProt Accessions	O00570	Gene names	SOX1
Domain Architecture
Description	SOX-1 protein.

SOX1_MOUSE
θ value	0.0961366 (rank : 34)	NC score	0.360126 (rank : 41)
Query Neighborhood Hits	93	Target Neighborhood Hits	90	Shared Neighborhood Hits	78
SwissProt Accessions	P53783	Gene names	Sox1, Sox-1
Domain Architecture
Description	SOX-1 protein.

SOX21_HUMAN
θ value	0.0961366 (rank : 35)	NC score	0.371432 (rank : 33)
Query Neighborhood Hits	93	Target Neighborhood Hits	89	Shared Neighborhood Hits	77
SwissProt Accessions	Q9Y651, P35715, Q15504	Gene names	SOX21, SOX25, SOXA
Domain Architecture
Description	Transcription factor SOX-21 (SOX-A).

SOX21_MOUSE
θ value	0.0961366 (rank : 36)	NC score	0.371413 (rank : 34)
Query Neighborhood Hits	93	Target Neighborhood Hits	90	Shared Neighborhood Hits	77
SwissProt Accessions	Q811W0, Q8VH35	Gene names	Sox21
Domain Architecture	No domain graphic available
Description	Transcription factor SOX-21.

A4_HUMAN
θ value	0.125558 (rank : 37)	NC score	0.061284 (rank : 85)
Query Neighborhood Hits	93	Target Neighborhood Hits	274	Shared Neighborhood Hits	6
SwissProt Accessions	P05067, P09000, P78438, Q13764, Q13778, Q13793, Q16011, Q16014, Q16019, Q16020, Q9BT38, Q9UCA9, Q9UCB6, Q9UCC8, Q9UCD1, Q9UQ58	Gene names	APP, A4, AD1
Domain Architecture	No domain graphic available
Description	Amyloid beta A4 protein precursor (APP) (ABPP) (Alzheimer disease amyloid protein) (Cerebral vascular amyloid peptide) (CVAP) (Protease nexin-II) (PN-II) (APPI) (PreA4) [Contains: Soluble APP-alpha (S-APP- alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); Gamma-CTF(59) (Gamma-secretase C-terminal fragment 59) (Amyloid intracellular domain 59) (AID(59)); Gamma-CTF(57) (Gamma- secretase C-terminal fragment 57) (Amyloid intracellular domain 57) (AID(57)); Gamma-CTF(50) (Gamma-secretase C-terminal fragment 50) (Amyloid intracellular domain 50) (AID(50)); C31].

CIC_HUMAN
θ value	0.125558 (rank : 38)	NC score	0.295545 (rank : 72)
Query Neighborhood Hits	93	Target Neighborhood Hits	992	Shared Neighborhood Hits	84
SwissProt Accessions	Q96RK0, Q7LGI1, Q9UEG5, Q9Y6T1	Gene names	CIC, KIAA0306
Domain Architecture	No domain graphic available
Description	Protein capicua homolog.

CIC_MOUSE
θ value	0.125558 (rank : 39)	NC score	0.310377 (rank : 63)
Query Neighborhood Hits	93	Target Neighborhood Hits	742	Shared Neighborhood Hits	81
SwissProt Accessions	Q924A2, Q6PDJ8, Q8CGE4, Q8CHH0, Q9CW61	Gene names	Cic, Kiaa0306
Domain Architecture	No domain graphic available
Description	Protein capicua homolog.

SOX3_HUMAN
θ value	0.125558 (rank : 40)	NC score	0.359107 (rank : 42)
Query Neighborhood Hits	93	Target Neighborhood Hits	109	Shared Neighborhood Hits	77
SwissProt Accessions	P41225, P35714, Q9NP49	Gene names	SOX3
Domain Architecture
Description	Transcription factor SOX-3.

SOX3_MOUSE
θ value	0.125558 (rank : 41)	NC score	0.361536 (rank : 38)
Query Neighborhood Hits	93	Target Neighborhood Hits	101	Shared Neighborhood Hits	77
SwissProt Accessions	P53784	Gene names	Sox3, Sox-3
Domain Architecture
Description	Transcription factor SOX-3.

GCX1_HUMAN
θ value	0.163984 (rank : 42)	NC score	0.441323 (rank : 26)
Query Neighborhood Hits	93	Target Neighborhood Hits	132	Shared Neighborhood Hits	55
SwissProt Accessions	Q96NM4, Q5TE33, Q5TE34, Q5TE35, Q96IC9, Q9BQN5	Gene names	GCX1, C20orf100
Domain Architecture
Description	Granulosa cell HMG box protein 1 (GCX-1).

SOX15_HUMAN
θ value	0.21417 (rank : 43)	NC score	0.369796 (rank : 35)
Query Neighborhood Hits	93	Target Neighborhood Hits	134	Shared Neighborhood Hits	79
SwissProt Accessions	O60248, P35717, Q9Y6W7	Gene names	SOX15, SOX12, SOX20, SOX26, SOX27
Domain Architecture
Description	SOX-15 protein (SOX-20 protein) (SOX-12 protein).

SOX2_HUMAN
θ value	0.21417 (rank : 44)	NC score	0.372278 (rank : 31)
Query Neighborhood Hits	93	Target Neighborhood Hits	89	Shared Neighborhood Hits	78
SwissProt Accessions	P48431, Q14537	Gene names	SOX2
Domain Architecture
Description	Transcription factor SOX-2.

SOX2_MOUSE
θ value	0.21417 (rank : 45)	NC score	0.372196 (rank : 32)
Query Neighborhood Hits	93	Target Neighborhood Hits	90	Shared Neighborhood Hits	78
SwissProt Accessions	P48432	Gene names	Sox2, Sox-2
Domain Architecture
Description	Transcription factor SOX-2.

SOX8_HUMAN
θ value	0.365318 (rank : 46)	NC score	0.350347 (rank : 44)
Query Neighborhood Hits	93	Target Neighborhood Hits	100	Shared Neighborhood Hits	74
SwissProt Accessions	P57073, Q9NZW2	Gene names	SOX8
Domain Architecture
Description	Transcription factor SOX-8.

SOX8_MOUSE
θ value	0.365318 (rank : 47)	NC score	0.353732 (rank : 43)
Query Neighborhood Hits	93	Target Neighborhood Hits	96	Shared Neighborhood Hits	74
SwissProt Accessions	Q04886	Gene names	Sox8, Sox-8
Domain Architecture
Description	Transcription factor SOX-8.

SOX9_HUMAN
θ value	0.47712 (rank : 48)	NC score	0.331033 (rank : 58)
Query Neighborhood Hits	93	Target Neighborhood Hits	210	Shared Neighborhood Hits	73
SwissProt Accessions	P48436	Gene names	SOX9
Domain Architecture
Description	Transcription factor SOX-9.

SOX9_MOUSE
θ value	0.47712 (rank : 49)	NC score	0.331340 (rank : 57)
Query Neighborhood Hits	93	Target Neighborhood Hits	188	Shared Neighborhood Hits	73
SwissProt Accessions	Q04887, Q8C7L2, Q91ZK2, Q99KQ0	Gene names	Sox9, Sox-9
Domain Architecture
Description	Transcription factor SOX-9.

SOX15_MOUSE
θ value	0.62314 (rank : 50)	NC score	0.366692 (rank : 36)
Query Neighborhood Hits	93	Target Neighborhood Hits	100	Shared Neighborhood Hits	79
SwissProt Accessions	P43267, O70204, P70418, Q62246, Q91V00, Q91V43, Q920T1, Q9JLG2	Gene names	Sox15, Sox-15
Domain Architecture
Description	SOX-15 protein.

A4_MOUSE
θ value	0.813845 (rank : 51)	NC score	0.053650 (rank : 86)
Query Neighborhood Hits	93	Target Neighborhood Hits	275	Shared Neighborhood Hits	9
SwissProt Accessions	P12023, P97487, P97942, Q99K32	Gene names	App
Domain Architecture	No domain graphic available
Description	Amyloid beta A4 protein precursor (APP) (ABPP) (Alzheimer disease amyloid protein homolog) (Amyloidogenic glycoprotein) (AG) [Contains: Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99 (APP-C99); Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); Gamma-CTF(59) (Gamma-secretase C-terminal fragment 59) (Amyloid intracellular domain 59) (AID(59)) (APP-C59); Gamma-CTF(57) (Gamma-secretase C-terminal fragment 57) (Amyloid intracellular domain 57) (AID(57)) (APP-C57); Gamma-CTF(50) (Gamma-secretase C-terminal fragment 50) (Amyloid intracellular domain 50) (AID(50)); C31].

ALMS1_MOUSE
θ value	0.813845 (rank : 52)	NC score	0.078768 (rank : 84)
Query Neighborhood Hits	93	Target Neighborhood Hits	181	Shared Neighborhood Hits	10
SwissProt Accessions	Q8K4E0, Q6A084, Q8C9N9	Gene names	Alms1, Kiaa0328
Domain Architecture	No domain graphic available
Description	Alstrom syndrome protein 1 homolog.

SOX13_HUMAN
θ value	0.813845 (rank : 53)	NC score	0.309333 (rank : 67)
Query Neighborhood Hits	93	Target Neighborhood Hits	464	Shared Neighborhood Hits	84
SwissProt Accessions	Q9UN79, O95275, O95826, Q9UHW7	Gene names	SOX13
Domain Architecture
Description	SOX-13 protein (Type 1 diabetes autoantigen ICA12) (Islet cell antigen 12).

SOX13_MOUSE
θ value	0.813845 (rank : 54)	NC score	0.310362 (rank : 64)
Query Neighborhood Hits	93	Target Neighborhood Hits	495	Shared Neighborhood Hits	84
SwissProt Accessions	Q04891, Q922L3	Gene names	Sox13, Sox-13
Domain Architecture
Description	SOX-13 protein.

SOX6_HUMAN
θ value	0.813845 (rank : 55)	NC score	0.309572 (rank : 65)
Query Neighborhood Hits	93	Target Neighborhood Hits	332	Shared Neighborhood Hits	82
SwissProt Accessions	P35712, Q9BXQ3, Q9BXQ4, Q9BXQ5, Q9H0I8	Gene names	SOX6
Domain Architecture
Description	Transcription factor SOX-6.

SOX6_MOUSE
θ value	0.813845 (rank : 56)	NC score	0.308967 (rank : 68)
Query Neighborhood Hits	93	Target Neighborhood Hits	341	Shared Neighborhood Hits	82
SwissProt Accessions	P40645, Q62250, Q9QWS5	Gene names	Sox6, Sox-6
Domain Architecture
Description	Transcription factor SOX-6 (SOX-LZ).

SOX10_HUMAN
θ value	1.06291 (rank : 57)	NC score	0.315197 (rank : 62)
Query Neighborhood Hits	93	Target Neighborhood Hits	122	Shared Neighborhood Hits	68
SwissProt Accessions	P56693	Gene names	SOX10
Domain Architecture
Description	Transcription factor SOX-10.

SOX10_MOUSE
θ value	1.06291 (rank : 58)	NC score	0.315508 (rank : 61)
Query Neighborhood Hits	93	Target Neighborhood Hits	110	Shared Neighborhood Hits	68
SwissProt Accessions	Q04888, O08518, O09141, O54856, P70416	Gene names	Sox10, Sox-10, Sox21
Domain Architecture
Description	Transcription factor SOX-10 (SOX-21) (Transcription factor SOX-M).

TF7L1_HUMAN
θ value	1.06291 (rank : 59)	NC score	0.191528 (rank : 81)
Query Neighborhood Hits	93	Target Neighborhood Hits	129	Shared Neighborhood Hits	65
SwissProt Accessions	Q9HCS4, Q53R97, Q6PD70, Q9NP00	Gene names	TCF7L1, TCF3
Domain Architecture
Description	Transcription factor 7-like 1 (HMG box transcription factor 3) (TCF- 3).

PITX3_HUMAN
θ value	1.38821 (rank : 60)	NC score	0.013676 (rank : 94)
Query Neighborhood Hits	93	Target Neighborhood Hits	366	Shared Neighborhood Hits	5
SwissProt Accessions	O75364	Gene names	PITX3, PTX3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

PITX3_MOUSE
θ value	1.38821 (rank : 61)	NC score	0.013974 (rank : 93)
Query Neighborhood Hits	93	Target Neighborhood Hits	380	Shared Neighborhood Hits	6
SwissProt Accessions	O35160	Gene names	Pitx3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

SOX5_HUMAN
θ value	1.38821 (rank : 62)	NC score	0.304168 (rank : 70)
Query Neighborhood Hits	93	Target Neighborhood Hits	219	Shared Neighborhood Hits	78
SwissProt Accessions	P35711, Q86UK8, Q8J017, Q8J018, Q8J019, Q8J020, Q8N1D9, Q8N7E0, Q8TEA4	Gene names	SOX5
Domain Architecture
Description	Transcription factor SOX-5.

SOX5_MOUSE
θ value	1.38821 (rank : 63)	NC score	0.305487 (rank : 69)
Query Neighborhood Hits	93	Target Neighborhood Hits	196	Shared Neighborhood Hits	78
SwissProt Accessions	P35710, O88184, O89018	Gene names	Sox5, Sox-5
Domain Architecture
Description	Transcription factor SOX-5.

SOX7_MOUSE
θ value	1.81305 (rank : 64)	NC score	0.365066 (rank : 37)
Query Neighborhood Hits	93	Target Neighborhood Hits	105	Shared Neighborhood Hits	78
SwissProt Accessions	P40646, Q9R1T6	Gene names	Sox7, Sox-7
Domain Architecture
Description	Transcription factor SOX-7 (mSOX7).

TF7L1_MOUSE
θ value	1.81305 (rank : 65)	NC score	0.188099 (rank : 82)
Query Neighborhood Hits	93	Target Neighborhood Hits	131	Shared Neighborhood Hits	65
SwissProt Accessions	Q9Z1J1, O70450, O70573	Gene names	Tcf7l1, Tcf3
Domain Architecture
Description	Transcription factor 7-like 1 (HMG box transcription factor 3) (TCF-3) (mTCF-3).

SOX11_HUMAN
θ value	2.36792 (rank : 66)	NC score	0.343055 (rank : 47)
Query Neighborhood Hits	93	Target Neighborhood Hits	89	Shared Neighborhood Hits	75
SwissProt Accessions	P35716	Gene names	SOX11
Domain Architecture
Description	Transcription factor SOX-11.

SOX11_MOUSE
θ value	2.36792 (rank : 67)	NC score	0.341847 (rank : 50)
Query Neighborhood Hits	93	Target Neighborhood Hits	96	Shared Neighborhood Hits	75
SwissProt Accessions	Q7M6Y2, O35178, O89036, Q04889, Q80XF0	Gene names	Sox11, Sox-11
Domain Architecture	No domain graphic available
Description	Transcription factor SOX-11.

SOX18_HUMAN
θ value	2.36792 (rank : 68)	NC score	0.344259 (rank : 46)
Query Neighborhood Hits	93	Target Neighborhood Hits	106	Shared Neighborhood Hits	74
SwissProt Accessions	P35713, Q9NPH8	Gene names	SOX18
Domain Architecture
Description	Transcription factor SOX-18.

SOX18_MOUSE
θ value	2.36792 (rank : 69)	NC score	0.340455 (rank : 52)
Query Neighborhood Hits	93	Target Neighborhood Hits	105	Shared Neighborhood Hits	73
SwissProt Accessions	P43680, Q9EQ73	Gene names	Sox18, Sox-18
Domain Architecture
Description	Transcription factor SOX-18.

SOX17_HUMAN
θ value	3.0926 (rank : 70)	NC score	0.337112 (rank : 53)
Query Neighborhood Hits	93	Target Neighborhood Hits	108	Shared Neighborhood Hits	75
SwissProt Accessions	Q9H6I2	Gene names	SOX17
Domain Architecture
Description	Transcription factor SOX-17.

SOX17_MOUSE
θ value	3.0926 (rank : 71)	NC score	0.341362 (rank : 51)
Query Neighborhood Hits	93	Target Neighborhood Hits	223	Shared Neighborhood Hits	76
SwissProt Accessions	Q61473, Q61472, Q62248	Gene names	Sox17, Sox-17
Domain Architecture
Description	Transcription factor SOX-17.

SOX7_HUMAN
θ value	3.0926 (rank : 72)	NC score	0.361202 (rank : 39)
Query Neighborhood Hits	93	Target Neighborhood Hits	140	Shared Neighborhood Hits	80
SwissProt Accessions	Q9BT81	Gene names	SOX7
Domain Architecture
Description	Transcription factor SOX-7.

TF7L2_HUMAN
θ value	3.0926 (rank : 73)	NC score	0.191721 (rank : 80)
Query Neighborhood Hits	93	Target Neighborhood Hits	119	Shared Neighborhood Hits	61
SwissProt Accessions	Q9NQB0, O00185, Q9NQB1, Q9NQB2, Q9NQB3, Q9NQB4, Q9NQB5, Q9NQB6, Q9NQB7, Q9ULC2	Gene names	TCF7L2, TCF4
Domain Architecture
Description	Transcription factor 7-like 2 (HMG box transcription factor 4) (T- cell-specific transcription factor 4) (TCF-4) (hTCF-4).

TF7L2_MOUSE
θ value	3.0926 (rank : 74)	NC score	0.192771 (rank : 78)
Query Neighborhood Hits	93	Target Neighborhood Hits	95	Shared Neighborhood Hits	61
SwissProt Accessions	Q924A0, O70574, Q91XP2, Q91XP3, Q91XP4, Q924A1, Q9Z0V3, Q9Z0V4	Gene names	Tcf7l2, Tcf4
Domain Architecture
Description	Transcription factor 7-like 2 (HMG box transcription factor 4) (T- cell-specific transcription factor 4) (TCF-4) (mTCF-4).

SOX12_HUMAN
θ value	4.03905 (rank : 75)	NC score	0.342397 (rank : 48)
Query Neighborhood Hits	93	Target Neighborhood Hits	111	Shared Neighborhood Hits	72
SwissProt Accessions	O15370, Q9NUD4	Gene names	SOX12, SOX22
Domain Architecture
Description	SOX-12 protein (SOX-22 protein).

SOX12_MOUSE
θ value	4.03905 (rank : 76)	NC score	0.342315 (rank : 49)
Query Neighborhood Hits	93	Target Neighborhood Hits	98	Shared Neighborhood Hits	72
SwissProt Accessions	Q04890, P70417, Q6NXL2	Gene names	Sox12, Sox-12
Domain Architecture	No domain graphic available
Description	SOX-12 protein.

SOX30_HUMAN
θ value	4.03905 (rank : 77)	NC score	0.316272 (rank : 60)
Query Neighborhood Hits	93	Target Neighborhood Hits	305	Shared Neighborhood Hits	78
SwissProt Accessions	O94993, O94995, Q8IYX6	Gene names	SOX30
Domain Architecture
Description	Transcription factor SOX-30.

SOX30_MOUSE
θ value	4.03905 (rank : 78)	NC score	0.319376 (rank : 59)
Query Neighborhood Hits	93	Target Neighborhood Hits	374	Shared Neighborhood Hits	81
SwissProt Accessions	Q8CGW4	Gene names	Sox30
Domain Architecture
Description	Transcription factor SOX-30.

MLL3_MOUSE
θ value	5.27518 (rank : 79)	NC score	0.016245 (rank : 90)
Query Neighborhood Hits	93	Target Neighborhood Hits	1399	Shared Neighborhood Hits	25
SwissProt Accessions	Q8BRH4, Q5YLV9, Q8BK12, Q8C6M3, Q923H5, Q923H6	Gene names	Mll3
Domain Architecture
Description	Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog (EC 2.1.1.43) (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3).

ZN548_HUMAN
θ value	5.27518 (rank : 80)	NC score	-0.003703 (rank : 97)
Query Neighborhood Hits	93	Target Neighborhood Hits	739	Shared Neighborhood Hits	2
SwissProt Accessions	Q8NEK5, Q96M05	Gene names	ZNF548
Domain Architecture	No domain graphic available
Description	Zinc finger protein 548.

CNOT3_MOUSE
θ value	6.88961 (rank : 81)	NC score	0.023463 (rank : 88)
Query Neighborhood Hits	93	Target Neighborhood Hits	504	Shared Neighborhood Hits	9
SwissProt Accessions	Q8K0V4	Gene names	Cnot3, Not3
Domain Architecture
Description	CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3).

LEF1_HUMAN
θ value	6.88961 (rank : 82)	NC score	0.208443 (rank : 76)
Query Neighborhood Hits	93	Target Neighborhood Hits	150	Shared Neighborhood Hits	72
SwissProt Accessions	Q9UJU2, Q9HAZ0	Gene names	LEF1
Domain Architecture
Description	Lymphoid enhancer-binding factor 1 (LEF-1) (T cell-specific transcription factor 1-alpha) (TCF1-alpha).

LEF1_MOUSE
θ value	6.88961 (rank : 83)	NC score	0.208179 (rank : 77)
Query Neighborhood Hits	93	Target Neighborhood Hits	161	Shared Neighborhood Hits	72
SwissProt Accessions	P27782	Gene names	Lef1, Lef-1
Domain Architecture
Description	Lymphoid enhancer-binding factor 1 (LEF-1).

SFPQ_HUMAN
θ value	6.88961 (rank : 84)	NC score	0.017286 (rank : 89)
Query Neighborhood Hits	93	Target Neighborhood Hits	986	Shared Neighborhood Hits	16
SwissProt Accessions	P23246, P30808	Gene names	SFPQ, PSF
Domain Architecture
Description	Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100 kDa DNA-pairing protein) (hPOMp100).

SFPQ_MOUSE
θ value	6.88961 (rank : 85)	NC score	0.016193 (rank : 91)
Query Neighborhood Hits	93	Target Neighborhood Hits	958	Shared Neighborhood Hits	16
SwissProt Accessions	Q8VIJ6, Q9ERW2	Gene names	Sfpq
Domain Architecture	No domain graphic available
Description	Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit).

SOX4_HUMAN
θ value	6.88961 (rank : 86)	NC score	0.334576 (rank : 54)
Query Neighborhood Hits	93	Target Neighborhood Hits	111	Shared Neighborhood Hits	75
SwissProt Accessions	Q06945	Gene names	SOX4
Domain Architecture
Description	Transcription factor SOX-4.

SOX4_MOUSE
θ value	6.88961 (rank : 87)	NC score	0.333705 (rank : 55)
Query Neighborhood Hits	93	Target Neighborhood Hits	108	Shared Neighborhood Hits	75
SwissProt Accessions	Q06831	Gene names	Sox4, Sox-4
Domain Architecture
Description	Transcription factor SOX-4.

BBX_HUMAN
θ value	8.99809 (rank : 88)	NC score	0.299709 (rank : 71)
Query Neighborhood Hits	93	Target Neighborhood Hits	167	Shared Neighborhood Hits	72
SwissProt Accessions	Q8WY36, Q2TAJ1, Q7L3J8, Q7LBY8, Q8NDB0, Q8WY35, Q9H0J6	Gene names	BBX, HBP2
Domain Architecture	No domain graphic available
Description	HMG box transcription factor BBX (Bobby sox homolog) (HMG box- containing protein 2).

BBX_MOUSE
θ value	8.99809 (rank : 89)	NC score	0.309373 (rank : 66)
Query Neighborhood Hits	93	Target Neighborhood Hits	152	Shared Neighborhood Hits	74
SwissProt Accessions	Q8VBW5, Q3TZK1, Q6NXY8, Q6PEU3, Q8BQJ7, Q8C7E0, Q8CDQ0, Q8CDV1, Q8VI48, Q8VI49, Q8VI50, Q9CS94	Gene names	Bbx, Hbp2
Domain Architecture	No domain graphic available
Description	HMG box transcription factor BBX (Bobby sox homolog) (HMG box- containing protein 2).

CNOT3_HUMAN
θ value	8.99809 (rank : 90)	NC score	0.023787 (rank : 87)
Query Neighborhood Hits	93	Target Neighborhood Hits	425	Shared Neighborhood Hits	10
SwissProt Accessions	O75175, Q9NZN7, Q9UF76	Gene names	CNOT3, KIAA0691, NOT3
Domain Architecture
Description	CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3).

GOGA1_HUMAN
θ value	8.99809 (rank : 91)	NC score	0.008294 (rank : 96)
Query Neighborhood Hits	93	Target Neighborhood Hits	1222	Shared Neighborhood Hits	17
SwissProt Accessions	Q92805, Q8IYZ9	Gene names	GOLGA1
Domain Architecture
Description	Golgin subfamily A member 1 (Golgin-97).

MLL2_HUMAN
θ value	8.99809 (rank : 92)	NC score	0.015246 (rank : 92)
Query Neighborhood Hits	93	Target Neighborhood Hits	1788	Shared Neighborhood Hits	25
SwissProt Accessions	O14686, O14687	Gene names	MLL2, ALR
Domain Architecture
Description	Myeloid/lymphoid or mixed-lineage leukemia protein 2 (ALL1-related protein).

TRPC5_MOUSE
θ value	8.99809 (rank : 93)	NC score	0.011267 (rank : 95)
Query Neighborhood Hits	93	Target Neighborhood Hits	124	Shared Neighborhood Hits	3
SwissProt Accessions	Q9QX29, Q61059, Q9QWT1, Q9R0D4	Gene names	Trpc5, Trp5, Trrp5
Domain Architecture
Description	Short transient receptor potential channel 5 (TrpC5) (Transient receptor protein 5) (Mtrp5) (trp-related protein 5) (Capacitative calcium entry channel 2) (CCE2).

HBP1_HUMAN
θ value	θ > 10 (rank : 94)	NC score	0.247945 (rank : 74)
Query Neighborhood Hits	93	Target Neighborhood Hits	89	Shared Neighborhood Hits	71
SwissProt Accessions	O60381, Q8TBM1, Q8TE93, Q96AJ2	Gene names	HBP1
Domain Architecture	No domain graphic available
Description	HMG box-containing protein 1 (HMG box transcription factor 1) (High mobility group box transcription factor 1).

HBP1_MOUSE
θ value	θ > 10 (rank : 95)	NC score	0.250726 (rank : 73)
Query Neighborhood Hits	93	Target Neighborhood Hits	86	Shared Neighborhood Hits	72
SwissProt Accessions	Q8R316, Q3V0I4, Q8BUS3, Q8C199	Gene names	Hbp1
Domain Architecture	No domain graphic available
Description	HMG box-containing protein 1 (HMG box transcription factor 1) (High mobility group box transcription factor 1).

TCF7_HUMAN
θ value	θ > 10 (rank : 96)	NC score	0.212415 (rank : 75)
Query Neighborhood Hits	93	Target Neighborhood Hits	186	Shared Neighborhood Hits	67
SwissProt Accessions	P36402, Q9UKI4	Gene names	TCF7, TCF1
Domain Architecture
Description	Transcription factor 7 (T-cell-specific transcription factor 1) (TCF- 1) (T-cell factor 1).

TCF7_MOUSE
θ value	θ > 10 (rank : 97)	NC score	0.191919 (rank : 79)
Query Neighborhood Hits	93	Target Neighborhood Hits	277	Shared Neighborhood Hits	67
SwissProt Accessions	Q00417	Gene names	Tcf7, Tcf-1, Tcf1
Domain Architecture
Description	Transcription factor 7 (T-cell-specific transcription factor 1) (TCF- 1) (T-cell factor 1).

Hits sorted by NC score

TFAM_MOUSE
NC score	0.999962 (rank : 1)	θ value	4.45295e-124 (rank : 1)
Query Neighborhood Hits	93	Target Neighborhood Hits	93	Shared Neighborhood Hits	93
SwissProt Accessions	P40630, P97894, P97906, Q543I8, Q9DBM9	Gene names	Tfam, Hmgts
Domain Architecture
Description	Transcription factor A, mitochondrial precursor (mtTFA) (Testis- specific high mobility group protein) (TS-HMG).

TFAM_HUMAN
NC score	0.927420 (rank : 2)	θ value	2.16048e-86 (rank : 2)
Query Neighborhood Hits	93	Target Neighborhood Hits	156	Shared Neighborhood Hits	65
SwissProt Accessions	Q00059	Gene names	TFAM, TCF6L2
Domain Architecture
Description	Transcription factor A, mitochondrial precursor (mtTFA) (Mitochondrial transcription factor 1) (MtTF1) (Transcription factor 6-like 2).

HMGB1_MOUSE
NC score	0.625260 (rank : 3)	θ value	7.59969e-07 (rank : 9)
Query Neighborhood Hits	93	Target Neighborhood Hits	123	Shared Neighborhood Hits	76
SwissProt Accessions	P63158, P07155, P27109, P27428	Gene names	Hmgb1, Hmg-1, Hmg1
Domain Architecture	No domain graphic available
Description	High mobility group protein B1 (High mobility group protein 1) (HMG- 1).

HMGB1_HUMAN
NC score	0.625013 (rank : 4)	θ value	7.59969e-07 (rank : 8)
Query Neighborhood Hits	93	Target Neighborhood Hits	126	Shared Neighborhood Hits	76
SwissProt Accessions	P09429, Q6IBE1	Gene names	HMGB1, HMG1
Domain Architecture
Description	High mobility group protein B1 (High mobility group protein 1) (HMG- 1).

HMGB3_MOUSE
NC score	0.619413 (rank : 5)	θ value	1.87187e-05 (rank : 20)
Query Neighborhood Hits	93	Target Neighborhood Hits	88	Shared Neighborhood Hits	74
SwissProt Accessions	O54879	Gene names	Hmgb3, Hmg2a, Hmg4
Domain Architecture
Description	High mobility group protein B3 (High mobility group protein 4) (HMG-4) (High mobility group protein 2a) (HMG-2a).

HMGB2_HUMAN
NC score	0.619318 (rank : 6)	θ value	4.92598e-06 (rank : 12)
Query Neighborhood Hits	93	Target Neighborhood Hits	114	Shared Neighborhood Hits	80
SwissProt Accessions	P26583	Gene names	HMGB2, HMG2
Domain Architecture
Description	High mobility group protein B2 (High mobility group protein 2) (HMG- 2).

HMGB3_HUMAN
NC score	0.616844 (rank : 7)	θ value	2.44474e-05 (rank : 21)
Query Neighborhood Hits	93	Target Neighborhood Hits	86	Shared Neighborhood Hits	74
SwissProt Accessions	O15347, O95556, Q6NS40	Gene names	HMGB3, HMG2A, HMG4
Domain Architecture
Description	High mobility group protein B3 (High mobility group protein 4) (HMG-4) (High mobility group protein 2a) (HMG-2a).

HMGB2_MOUSE
NC score	0.616094 (rank : 8)	θ value	8.40245e-06 (rank : 13)
Query Neighborhood Hits	93	Target Neighborhood Hits	111	Shared Neighborhood Hits	78
SwissProt Accessions	P30681, Q3UXT1, Q9EQD5	Gene names	Hmgb2, Hmg2
Domain Architecture
Description	High mobility group protein B2 (High mobility group protein 2) (HMG- 2).

HM20B_HUMAN
NC score	0.612231 (rank : 9)	θ value	1.87187e-05 (rank : 19)
Query Neighborhood Hits	93	Target Neighborhood Hits	126	Shared Neighborhood Hits	76
SwissProt Accessions	Q9P0W2, Q6IBP8, Q8NBD5, Q9HD21, Q9Y491, Q9Y4A2	Gene names	HMG20B, BRAF35, HMGX2, SMARCE1R
Domain Architecture	No domain graphic available
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (SMARCE1-related protein) (HMG domain protein HMG20B) (Structural DNA-binding protein BRAF35) (BRCA2- associated factor 35) (Sox-like transcriptional factor).

HM20B_MOUSE
NC score	0.610220 (rank : 10)	θ value	1.43324e-05 (rank : 16)
Query Neighborhood Hits	93	Target Neighborhood Hits	122	Shared Neighborhood Hits	76
SwissProt Accessions	Q9Z104, Q9NSF7, Q9NSF8	Gene names	Hmg20b, Braf35, Hmgx2, Smarce1r
Domain Architecture	No domain graphic available
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (SMARCE1-related protein) (HMG domain protein HMG20B) (Structural DNA-binding protein BRAF35) (BRCA2- associated factor 35).

HMG1X_HUMAN
NC score	0.597268 (rank : 11)	θ value	0.000602161 (rank : 26)
Query Neighborhood Hits	93	Target Neighborhood Hits	97	Shared Neighborhood Hits	72
SwissProt Accessions	Q9UGV6	Gene names	HMG1L10
Domain Architecture
Description	High mobility group protein 1-like 10 (HMG-1L10).

SSRP1_HUMAN
NC score	0.570974 (rank : 12)	θ value	8.40245e-06 (rank : 14)
Query Neighborhood Hits	93	Target Neighborhood Hits	187	Shared Neighborhood Hits	78
SwissProt Accessions	Q08945, Q5BJG8	Gene names	SSRP1, FACT80
Domain Architecture
Description	FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (FACT 80 kDa subunit) (FACTp80) (Chromatin- specific transcription elongation factor 80 kDa subunit) (Structure- specific recognition protein 1) (hSSRP1) (Recombination signal sequence recognition protein 1) (T160).

SSRP1_MOUSE
NC score	0.567644 (rank : 13)	θ value	1.09739e-05 (rank : 15)
Query Neighborhood Hits	93	Target Neighborhood Hits	193	Shared Neighborhood Hits	78
SwissProt Accessions	Q08943, Q3U9Z2, Q3UJ75, Q4V9U4, Q8CGA6	Gene names	Ssrp1
Domain Architecture
Description	FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Structure-specific recognition protein 1) (Recombination signal sequence recognition protein 1) (T160).

UBF1_HUMAN
NC score	0.565837 (rank : 14)	θ value	2.52405e-10 (rank : 3)
Query Neighborhood Hits	93	Target Neighborhood Hits	415	Shared Neighborhood Hits	78
SwissProt Accessions	P17480	Gene names	UBTF, UBF, UBF1
Domain Architecture
Description	Nucleolar transcription factor 1 (Upstream-binding factor 1) (UBF-1) (Autoantigen NOR-90).

UBF1_MOUSE
NC score	0.556791 (rank : 15)	θ value	5.62301e-10 (rank : 4)
Query Neighborhood Hits	93	Target Neighborhood Hits	419	Shared Neighborhood Hits	78
SwissProt Accessions	P25976	Gene names	Ubtf, Tcfubf, Ubf-1, Ubf1
Domain Architecture
Description	Nucleolar transcription factor 1 (Upstream-binding factor 1) (UBF-1).

HM20A_HUMAN
NC score	0.551312 (rank : 16)	θ value	1.87187e-05 (rank : 17)
Query Neighborhood Hits	93	Target Neighborhood Hits	343	Shared Neighborhood Hits	76
SwissProt Accessions	Q9NP66, Q53G31, Q9NSF6	Gene names	HMG20A, HMGX1
Domain Architecture	No domain graphic available
Description	High mobility group protein 20A (HMG box-containing protein 20A) (HMG domain-containing protein HMGX1).

HM20A_MOUSE
NC score	0.550272 (rank : 17)	θ value	1.87187e-05 (rank : 18)
Query Neighborhood Hits	93	Target Neighborhood Hits	348	Shared Neighborhood Hits	76
SwissProt Accessions	Q9DC33, Q3LSF9, Q6NV87, Q8BSK1, Q8C3C1, Q8CAA0, Q9CYG2	Gene names	Hmg20a, Ibraf
Domain Architecture	No domain graphic available
Description	High mobility group protein 20A (HMG box-containing protein 20A) (iBRAF) (Inhibitor of BRAF35) (HMG domain protein HMGX1).

CN092_HUMAN
NC score	0.548937 (rank : 18)	θ value	2.21117e-06 (rank : 10)
Query Neighborhood Hits	93	Target Neighborhood Hits	143	Shared Neighborhood Hits	64
SwissProt Accessions	O94842	Gene names	C14orf92, KIAA0737
Domain Architecture
Description	Epidermal Langerhans cell protein LCP1.

CN092_MOUSE
NC score	0.538153 (rank : 19)	θ value	2.21117e-06 (rank : 11)
Query Neighborhood Hits	93	Target Neighborhood Hits	206	Shared Neighborhood Hits	65
SwissProt Accessions	Q8BU11, Q80UI2, Q99PN9, Q9CS16	Gene names
Domain Architecture
Description	Epidermal Langerhans cell protein LCP1.

TOX_MOUSE
NC score	0.534580 (rank : 20)	θ value	2.44474e-05 (rank : 23)
Query Neighborhood Hits	93	Target Neighborhood Hits	95	Shared Neighborhood Hits	54
SwissProt Accessions	Q66JW3, Q8BKH9, Q8BYQ5, Q8R4H0	Gene names	Tox
Domain Architecture	No domain graphic available
Description	Thymus high mobility group box protein TOX.

TOX_HUMAN
NC score	0.531505 (rank : 21)	θ value	2.44474e-05 (rank : 22)
Query Neighborhood Hits	93	Target Neighborhood Hits	106	Shared Neighborhood Hits	55
SwissProt Accessions	O94900, Q96AV5	Gene names	TOX, KIAA0808
Domain Architecture	No domain graphic available
Description	Thymus high mobility group box protein TOX.

SMCE1_HUMAN
NC score	0.527425 (rank : 22)	θ value	1.17247e-07 (rank : 5)
Query Neighborhood Hits	93	Target Neighborhood Hits	272	Shared Neighborhood Hits	67
SwissProt Accessions	Q969G3, O43539	Gene names	SMARCE1, BAF57
Domain Architecture	No domain graphic available
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 (BRG1-associated factor 57).

SMCE1_MOUSE
NC score	0.500495 (rank : 23)	θ value	1.17247e-07 (rank : 6)
Query Neighborhood Hits	93	Target Neighborhood Hits	409	Shared Neighborhood Hits	68
SwissProt Accessions	O54941, Q8BPD9	Gene names	Smarce1, Baf57
Domain Architecture	No domain graphic available
Description	SWI/SNF-related matrix-associated actin-dependent regulator chromatin subfamily E member 1 (BRG1-associated factor 57).

SP100_HUMAN
NC score	0.496718 (rank : 24)	θ value	5.81887e-07 (rank : 7)
Query Neighborhood Hits	93	Target Neighborhood Hits	117	Shared Neighborhood Hits	67
SwissProt Accessions	P23497, O75450, Q13343, Q96F70, Q96T24, Q96T95, Q9NP33, Q9UE32	Gene names	SP100
Domain Architecture
Description	Nuclear autoantigen Sp-100 (Speckled 100 kDa) (Nuclear dot-associated Sp100 protein) (Lysp100b).

HM2L1_HUMAN
NC score	0.485618 (rank : 25)	θ value	0.000461057 (rank : 25)
Query Neighborhood Hits	93	Target Neighborhood Hits	130	Shared Neighborhood Hits	72
SwissProt Accessions	Q9UGU5, O75672, O75673, Q9UMT5	Gene names	HMG2L1, HMGBCG
Domain Architecture
Description	High mobility group protein 2-like 1 (Protein HMGBCG).

GCX1_HUMAN
NC score	0.441323 (rank : 26)	θ value	0.163984 (rank : 42)
Query Neighborhood Hits	93	Target Neighborhood Hits	132	Shared Neighborhood Hits	55
SwissProt Accessions	Q96NM4, Q5TE33, Q5TE34, Q5TE35, Q96IC9, Q9BQN5	Gene names	GCX1, C20orf100
Domain Architecture
Description	Granulosa cell HMG box protein 1 (GCX-1).

SOX14_MOUSE
NC score	0.389235 (rank : 27)	θ value	0.0148317 (rank : 29)
Query Neighborhood Hits	93	Target Neighborhood Hits	100	Shared Neighborhood Hits	78
SwissProt Accessions	Q04892, Q9JLC9, Q9JLD0, Q9QXU4	Gene names	Sox14, Sox-14
Domain Architecture
Description	Transcription factor SOX-14.

SOX14_HUMAN
NC score	0.389210 (rank : 28)	θ value	0.0148317 (rank : 28)
Query Neighborhood Hits	93	Target Neighborhood Hits	102	Shared Neighborhood Hits	78
SwissProt Accessions	O95416, Q3KPH7	Gene names	SOX14, SOX28
Domain Architecture
Description	Transcription factor SOX-14.

SRY_HUMAN
NC score	0.382318 (rank : 29)	θ value	0.0330416 (rank : 32)
Query Neighborhood Hits	93	Target Neighborhood Hits	83	Shared Neighborhood Hits	78
SwissProt Accessions	Q05066	Gene names	SRY, TDF
Domain Architecture
Description	Sex-determining region Y protein (Testis-determining factor).

SRY_MOUSE
NC score	0.375181 (rank : 30)	θ value	0.0148317 (rank : 30)
Query Neighborhood Hits	93	Target Neighborhood Hits	139	Shared Neighborhood Hits	78
SwissProt Accessions	Q05738	Gene names	Sry, Tdf, Tdy
Domain Architecture
Description	Sex-determining region Y protein (Testis-determining factor).

SOX2_HUMAN
NC score	0.372278 (rank : 31)	θ value	0.21417 (rank : 44)
Query Neighborhood Hits	93	Target Neighborhood Hits	89	Shared Neighborhood Hits	78
SwissProt Accessions	P48431, Q14537	Gene names	SOX2
Domain Architecture
Description	Transcription factor SOX-2.

SOX2_MOUSE
NC score	0.372196 (rank : 32)	θ value	0.21417 (rank : 45)
Query Neighborhood Hits	93	Target Neighborhood Hits	90	Shared Neighborhood Hits	78
SwissProt Accessions	P48432	Gene names	Sox2, Sox-2
Domain Architecture
Description	Transcription factor SOX-2.

SOX21_HUMAN
NC score	0.371432 (rank : 33)	θ value	0.0961366 (rank : 35)
Query Neighborhood Hits	93	Target Neighborhood Hits	89	Shared Neighborhood Hits	77
SwissProt Accessions	Q9Y651, P35715, Q15504	Gene names	SOX21, SOX25, SOXA
Domain Architecture
Description	Transcription factor SOX-21 (SOX-A).

SOX21_MOUSE
NC score	0.371413 (rank : 34)	θ value	0.0961366 (rank : 36)
Query Neighborhood Hits	93	Target Neighborhood Hits	90	Shared Neighborhood Hits	77
SwissProt Accessions	Q811W0, Q8VH35	Gene names	Sox21
Domain Architecture	No domain graphic available
Description	Transcription factor SOX-21.

SOX15_HUMAN
NC score	0.369796 (rank : 35)	θ value	0.21417 (rank : 43)
Query Neighborhood Hits	93	Target Neighborhood Hits	134	Shared Neighborhood Hits	79
SwissProt Accessions	O60248, P35717, Q9Y6W7	Gene names	SOX15, SOX12, SOX20, SOX26, SOX27
Domain Architecture
Description	SOX-15 protein (SOX-20 protein) (SOX-12 protein).

SOX15_MOUSE
NC score	0.366692 (rank : 36)	θ value	0.62314 (rank : 50)
Query Neighborhood Hits	93	Target Neighborhood Hits	100	Shared Neighborhood Hits	79
SwissProt Accessions	P43267, O70204, P70418, Q62246, Q91V00, Q91V43, Q920T1, Q9JLG2	Gene names	Sox15, Sox-15
Domain Architecture
Description	SOX-15 protein.

SOX7_MOUSE
NC score	0.365066 (rank : 37)	θ value	1.81305 (rank : 64)
Query Neighborhood Hits	93	Target Neighborhood Hits	105	Shared Neighborhood Hits	78
SwissProt Accessions	P40646, Q9R1T6	Gene names	Sox7, Sox-7
Domain Architecture
Description	Transcription factor SOX-7 (mSOX7).

SOX3_MOUSE
NC score	0.361536 (rank : 38)	θ value	0.125558 (rank : 41)
Query Neighborhood Hits	93	Target Neighborhood Hits	101	Shared Neighborhood Hits	77
SwissProt Accessions	P53784	Gene names	Sox3, Sox-3
Domain Architecture
Description	Transcription factor SOX-3.

SOX7_HUMAN
NC score	0.361202 (rank : 39)	θ value	3.0926 (rank : 72)
Query Neighborhood Hits	93	Target Neighborhood Hits	140	Shared Neighborhood Hits	80
SwissProt Accessions	Q9BT81	Gene names	SOX7
Domain Architecture
Description	Transcription factor SOX-7.

SOX1_HUMAN
NC score	0.360463 (rank : 40)	θ value	0.0961366 (rank : 33)
Query Neighborhood Hits	93	Target Neighborhood Hits	90	Shared Neighborhood Hits	78
SwissProt Accessions	O00570	Gene names	SOX1
Domain Architecture
Description	SOX-1 protein.

SOX1_MOUSE
NC score	0.360126 (rank : 41)	θ value	0.0961366 (rank : 34)
Query Neighborhood Hits	93	Target Neighborhood Hits	90	Shared Neighborhood Hits	78
SwissProt Accessions	P53783	Gene names	Sox1, Sox-1
Domain Architecture
Description	SOX-1 protein.

SOX3_HUMAN
NC score	0.359107 (rank : 42)	θ value	0.125558 (rank : 40)
Query Neighborhood Hits	93	Target Neighborhood Hits	109	Shared Neighborhood Hits	77
SwissProt Accessions	P41225, P35714, Q9NP49	Gene names	SOX3
Domain Architecture
Description	Transcription factor SOX-3.

SOX8_MOUSE
NC score	0.353732 (rank : 43)	θ value	0.365318 (rank : 47)
Query Neighborhood Hits	93	Target Neighborhood Hits	96	Shared Neighborhood Hits	74
SwissProt Accessions	Q04886	Gene names	Sox8, Sox-8
Domain Architecture
Description	Transcription factor SOX-8.

SOX8_HUMAN
NC score	0.350347 (rank : 44)	θ value	0.365318 (rank : 46)
Query Neighborhood Hits	93	Target Neighborhood Hits	100	Shared Neighborhood Hits	74
SwissProt Accessions	P57073, Q9NZW2	Gene names	SOX8
Domain Architecture
Description	Transcription factor SOX-8.

PB1_HUMAN
NC score	0.346967 (rank : 45)	θ value	5.44631e-05 (rank : 24)
Query Neighborhood Hits	93	Target Neighborhood Hits	261	Shared Neighborhood Hits	77
SwissProt Accessions	Q86U86, Q9H2T3, Q9H2T4, Q9H2T5, Q9H301, Q9H314	Gene names	PB1
Domain Architecture	No domain graphic available
Description	Protein polybromo-1 (hPB1) (Polybromo-1D) (BRG1-associated factor 180) (BAF180).

SOX18_HUMAN
NC score	0.344259 (rank : 46)	θ value	2.36792 (rank : 68)
Query Neighborhood Hits	93	Target Neighborhood Hits	106	Shared Neighborhood Hits	74
SwissProt Accessions	P35713, Q9NPH8	Gene names	SOX18
Domain Architecture
Description	Transcription factor SOX-18.

SOX11_HUMAN
NC score	0.343055 (rank : 47)	θ value	2.36792 (rank : 66)
Query Neighborhood Hits	93	Target Neighborhood Hits	89	Shared Neighborhood Hits	75
SwissProt Accessions	P35716	Gene names	SOX11
Domain Architecture
Description	Transcription factor SOX-11.

SOX12_HUMAN
NC score	0.342397 (rank : 48)	θ value	4.03905 (rank : 75)
Query Neighborhood Hits	93	Target Neighborhood Hits	111	Shared Neighborhood Hits	72
SwissProt Accessions	O15370, Q9NUD4	Gene names	SOX12, SOX22
Domain Architecture
Description	SOX-12 protein (SOX-22 protein).

SOX12_MOUSE
NC score	0.342315 (rank : 49)	θ value	4.03905 (rank : 76)
Query Neighborhood Hits	93	Target Neighborhood Hits	98	Shared Neighborhood Hits	72
SwissProt Accessions	Q04890, P70417, Q6NXL2	Gene names	Sox12, Sox-12
Domain Architecture	No domain graphic available
Description	SOX-12 protein.

SOX11_MOUSE
NC score	0.341847 (rank : 50)	θ value	2.36792 (rank : 67)
Query Neighborhood Hits	93	Target Neighborhood Hits	96	Shared Neighborhood Hits	75
SwissProt Accessions	Q7M6Y2, O35178, O89036, Q04889, Q80XF0	Gene names	Sox11, Sox-11
Domain Architecture	No domain graphic available
Description	Transcription factor SOX-11.

SOX17_MOUSE
NC score	0.341362 (rank : 51)	θ value	3.0926 (rank : 71)
Query Neighborhood Hits	93	Target Neighborhood Hits	223	Shared Neighborhood Hits	76
SwissProt Accessions	Q61473, Q61472, Q62248	Gene names	Sox17, Sox-17
Domain Architecture
Description	Transcription factor SOX-17.

SOX18_MOUSE
NC score	0.340455 (rank : 52)	θ value	2.36792 (rank : 69)
Query Neighborhood Hits	93	Target Neighborhood Hits	105	Shared Neighborhood Hits	73
SwissProt Accessions	P43680, Q9EQ73	Gene names	Sox18, Sox-18
Domain Architecture
Description	Transcription factor SOX-18.

SOX17_HUMAN
NC score	0.337112 (rank : 53)	θ value	3.0926 (rank : 70)
Query Neighborhood Hits	93	Target Neighborhood Hits	108	Shared Neighborhood Hits	75
SwissProt Accessions	Q9H6I2	Gene names	SOX17
Domain Architecture
Description	Transcription factor SOX-17.

SOX4_HUMAN
NC score	0.334576 (rank : 54)	θ value	6.88961 (rank : 86)
Query Neighborhood Hits	93	Target Neighborhood Hits	111	Shared Neighborhood Hits	75
SwissProt Accessions	Q06945	Gene names	SOX4
Domain Architecture
Description	Transcription factor SOX-4.

SOX4_MOUSE
NC score	0.333705 (rank : 55)	θ value	6.88961 (rank : 87)
Query Neighborhood Hits	93	Target Neighborhood Hits	108	Shared Neighborhood Hits	75
SwissProt Accessions	Q06831	Gene names	Sox4, Sox-4
Domain Architecture
Description	Transcription factor SOX-4.

PMS1_HUMAN
NC score	0.333123 (rank : 56)	θ value	0.00102713 (rank : 27)
Query Neighborhood Hits	93	Target Neighborhood Hits	126	Shared Neighborhood Hits	65
SwissProt Accessions	P54277	Gene names	PMS1, PMSL1
Domain Architecture
Description	PMS1 protein homolog 1 (DNA mismatch repair protein PMS1).

SOX9_MOUSE
NC score	0.331340 (rank : 57)	θ value	0.47712 (rank : 49)
Query Neighborhood Hits	93	Target Neighborhood Hits	188	Shared Neighborhood Hits	73
SwissProt Accessions	Q04887, Q8C7L2, Q91ZK2, Q99KQ0	Gene names	Sox9, Sox-9
Domain Architecture
Description	Transcription factor SOX-9.

SOX9_HUMAN
NC score	0.331033 (rank : 58)	θ value	0.47712 (rank : 48)
Query Neighborhood Hits	93	Target Neighborhood Hits	210	Shared Neighborhood Hits	73
SwissProt Accessions	P48436	Gene names	SOX9
Domain Architecture
Description	Transcription factor SOX-9.

SOX30_MOUSE
NC score	0.319376 (rank : 59)	θ value	4.03905 (rank : 78)
Query Neighborhood Hits	93	Target Neighborhood Hits	374	Shared Neighborhood Hits	81
SwissProt Accessions	Q8CGW4	Gene names	Sox30
Domain Architecture
Description	Transcription factor SOX-30.

SOX30_HUMAN
NC score	0.316272 (rank : 60)	θ value	4.03905 (rank : 77)
Query Neighborhood Hits	93	Target Neighborhood Hits	305	Shared Neighborhood Hits	78
SwissProt Accessions	O94993, O94995, Q8IYX6	Gene names	SOX30
Domain Architecture
Description	Transcription factor SOX-30.

SOX10_MOUSE
NC score	0.315508 (rank : 61)	θ value	1.06291 (rank : 58)
Query Neighborhood Hits	93	Target Neighborhood Hits	110	Shared Neighborhood Hits	68
SwissProt Accessions	Q04888, O08518, O09141, O54856, P70416	Gene names	Sox10, Sox-10, Sox21
Domain Architecture
Description	Transcription factor SOX-10 (SOX-21) (Transcription factor SOX-M).

SOX10_HUMAN
NC score	0.315197 (rank : 62)	θ value	1.06291 (rank : 57)
Query Neighborhood Hits	93	Target Neighborhood Hits	122	Shared Neighborhood Hits	68
SwissProt Accessions	P56693	Gene names	SOX10
Domain Architecture
Description	Transcription factor SOX-10.

CIC_MOUSE
NC score	0.310377 (rank : 63)	θ value	0.125558 (rank : 39)
Query Neighborhood Hits	93	Target Neighborhood Hits	742	Shared Neighborhood Hits	81
SwissProt Accessions	Q924A2, Q6PDJ8, Q8CGE4, Q8CHH0, Q9CW61	Gene names	Cic, Kiaa0306
Domain Architecture	No domain graphic available
Description	Protein capicua homolog.

SOX13_MOUSE
NC score	0.310362 (rank : 64)	θ value	0.813845 (rank : 54)
Query Neighborhood Hits	93	Target Neighborhood Hits	495	Shared Neighborhood Hits	84
SwissProt Accessions	Q04891, Q922L3	Gene names	Sox13, Sox-13
Domain Architecture
Description	SOX-13 protein.

SOX6_HUMAN
NC score	0.309572 (rank : 65)	θ value	0.813845 (rank : 55)
Query Neighborhood Hits	93	Target Neighborhood Hits	332	Shared Neighborhood Hits	82
SwissProt Accessions	P35712, Q9BXQ3, Q9BXQ4, Q9BXQ5, Q9H0I8	Gene names	SOX6
Domain Architecture
Description	Transcription factor SOX-6.

BBX_MOUSE
NC score	0.309373 (rank : 66)	θ value	8.99809 (rank : 89)
Query Neighborhood Hits	93	Target Neighborhood Hits	152	Shared Neighborhood Hits	74
SwissProt Accessions	Q8VBW5, Q3TZK1, Q6NXY8, Q6PEU3, Q8BQJ7, Q8C7E0, Q8CDQ0, Q8CDV1, Q8VI48, Q8VI49, Q8VI50, Q9CS94	Gene names	Bbx, Hbp2
Domain Architecture	No domain graphic available
Description	HMG box transcription factor BBX (Bobby sox homolog) (HMG box- containing protein 2).

SOX13_HUMAN
NC score	0.309333 (rank : 67)	θ value	0.813845 (rank : 53)
Query Neighborhood Hits	93	Target Neighborhood Hits	464	Shared Neighborhood Hits	84
SwissProt Accessions	Q9UN79, O95275, O95826, Q9UHW7	Gene names	SOX13
Domain Architecture
Description	SOX-13 protein (Type 1 diabetes autoantigen ICA12) (Islet cell antigen 12).

SOX6_MOUSE
NC score	0.308967 (rank : 68)	θ value	0.813845 (rank : 56)
Query Neighborhood Hits	93	Target Neighborhood Hits	341	Shared Neighborhood Hits	82
SwissProt Accessions	P40645, Q62250, Q9QWS5	Gene names	Sox6, Sox-6
Domain Architecture
Description	Transcription factor SOX-6 (SOX-LZ).

SOX5_MOUSE
NC score	0.305487 (rank : 69)	θ value	1.38821 (rank : 63)
Query Neighborhood Hits	93	Target Neighborhood Hits	196	Shared Neighborhood Hits	78
SwissProt Accessions	P35710, O88184, O89018	Gene names	Sox5, Sox-5
Domain Architecture
Description	Transcription factor SOX-5.

SOX5_HUMAN
NC score	0.304168 (rank : 70)	θ value	1.38821 (rank : 62)
Query Neighborhood Hits	93	Target Neighborhood Hits	219	Shared Neighborhood Hits	78
SwissProt Accessions	P35711, Q86UK8, Q8J017, Q8J018, Q8J019, Q8J020, Q8N1D9, Q8N7E0, Q8TEA4	Gene names	SOX5
Domain Architecture
Description	Transcription factor SOX-5.

BBX_HUMAN
NC score	0.299709 (rank : 71)	θ value	8.99809 (rank : 88)
Query Neighborhood Hits	93	Target Neighborhood Hits	167	Shared Neighborhood Hits	72
SwissProt Accessions	Q8WY36, Q2TAJ1, Q7L3J8, Q7LBY8, Q8NDB0, Q8WY35, Q9H0J6	Gene names	BBX, HBP2
Domain Architecture	No domain graphic available
Description	HMG box transcription factor BBX (Bobby sox homolog) (HMG box- containing protein 2).

CIC_HUMAN
NC score	0.295545 (rank : 72)	θ value	0.125558 (rank : 38)
Query Neighborhood Hits	93	Target Neighborhood Hits	992	Shared Neighborhood Hits	84
SwissProt Accessions	Q96RK0, Q7LGI1, Q9UEG5, Q9Y6T1	Gene names	CIC, KIAA0306
Domain Architecture	No domain graphic available
Description	Protein capicua homolog.

HBP1_MOUSE
NC score	0.250726 (rank : 73)	θ value	θ > 10 (rank : 95)
Query Neighborhood Hits	93	Target Neighborhood Hits	86	Shared Neighborhood Hits	72
SwissProt Accessions	Q8R316, Q3V0I4, Q8BUS3, Q8C199	Gene names	Hbp1
Domain Architecture	No domain graphic available
Description	HMG box-containing protein 1 (HMG box transcription factor 1) (High mobility group box transcription factor 1).

HBP1_HUMAN
NC score	0.247945 (rank : 74)	θ value	θ > 10 (rank : 94)
Query Neighborhood Hits	93	Target Neighborhood Hits	89	Shared Neighborhood Hits	71
SwissProt Accessions	O60381, Q8TBM1, Q8TE93, Q96AJ2	Gene names	HBP1
Domain Architecture	No domain graphic available
Description	HMG box-containing protein 1 (HMG box transcription factor 1) (High mobility group box transcription factor 1).

TCF7_HUMAN
NC score	0.212415 (rank : 75)	θ value	θ > 10 (rank : 96)
Query Neighborhood Hits	93	Target Neighborhood Hits	186	Shared Neighborhood Hits	67
SwissProt Accessions	P36402, Q9UKI4	Gene names	TCF7, TCF1
Domain Architecture
Description	Transcription factor 7 (T-cell-specific transcription factor 1) (TCF- 1) (T-cell factor 1).

LEF1_HUMAN
NC score	0.208443 (rank : 76)	θ value	6.88961 (rank : 82)
Query Neighborhood Hits	93	Target Neighborhood Hits	150	Shared Neighborhood Hits	72
SwissProt Accessions	Q9UJU2, Q9HAZ0	Gene names	LEF1
Domain Architecture
Description	Lymphoid enhancer-binding factor 1 (LEF-1) (T cell-specific transcription factor 1-alpha) (TCF1-alpha).

LEF1_MOUSE
NC score	0.208179 (rank : 77)	θ value	6.88961 (rank : 83)
Query Neighborhood Hits	93	Target Neighborhood Hits	161	Shared Neighborhood Hits	72
SwissProt Accessions	P27782	Gene names	Lef1, Lef-1
Domain Architecture
Description	Lymphoid enhancer-binding factor 1 (LEF-1).

TF7L2_MOUSE
NC score	0.192771 (rank : 78)	θ value	3.0926 (rank : 74)
Query Neighborhood Hits	93	Target Neighborhood Hits	95	Shared Neighborhood Hits	61
SwissProt Accessions	Q924A0, O70574, Q91XP2, Q91XP3, Q91XP4, Q924A1, Q9Z0V3, Q9Z0V4	Gene names	Tcf7l2, Tcf4
Domain Architecture
Description	Transcription factor 7-like 2 (HMG box transcription factor 4) (T- cell-specific transcription factor 4) (TCF-4) (mTCF-4).

TCF7_MOUSE
NC score	0.191919 (rank : 79)	θ value	θ > 10 (rank : 97)
Query Neighborhood Hits	93	Target Neighborhood Hits	277	Shared Neighborhood Hits	67
SwissProt Accessions	Q00417	Gene names	Tcf7, Tcf-1, Tcf1
Domain Architecture
Description	Transcription factor 7 (T-cell-specific transcription factor 1) (TCF- 1) (T-cell factor 1).

TF7L2_HUMAN
NC score	0.191721 (rank : 80)	θ value	3.0926 (rank : 73)
Query Neighborhood Hits	93	Target Neighborhood Hits	119	Shared Neighborhood Hits	61
SwissProt Accessions	Q9NQB0, O00185, Q9NQB1, Q9NQB2, Q9NQB3, Q9NQB4, Q9NQB5, Q9NQB6, Q9NQB7, Q9ULC2	Gene names	TCF7L2, TCF4
Domain Architecture
Description	Transcription factor 7-like 2 (HMG box transcription factor 4) (T- cell-specific transcription factor 4) (TCF-4) (hTCF-4).

TF7L1_HUMAN
NC score	0.191528 (rank : 81)	θ value	1.06291 (rank : 59)
Query Neighborhood Hits	93	Target Neighborhood Hits	129	Shared Neighborhood Hits	65
SwissProt Accessions	Q9HCS4, Q53R97, Q6PD70, Q9NP00	Gene names	TCF7L1, TCF3
Domain Architecture
Description	Transcription factor 7-like 1 (HMG box transcription factor 3) (TCF- 3).

TF7L1_MOUSE
NC score	0.188099 (rank : 82)	θ value	1.81305 (rank : 65)
Query Neighborhood Hits	93	Target Neighborhood Hits	131	Shared Neighborhood Hits	65
SwissProt Accessions	Q9Z1J1, O70450, O70573	Gene names	Tcf7l1, Tcf3
Domain Architecture
Description	Transcription factor 7-like 1 (HMG box transcription factor 3) (TCF-3) (mTCF-3).

ALMS1_HUMAN
NC score	0.087373 (rank : 83)	θ value	0.0252991 (rank : 31)
Query Neighborhood Hits	93	Target Neighborhood Hits	356	Shared Neighborhood Hits	13
SwissProt Accessions	Q8TCU4, Q53S05, Q580Q8, Q86VP9, Q9Y4G4	Gene names	ALMS1, KIAA0328
Domain Architecture	No domain graphic available
Description	Alstrom syndrome protein 1.

ALMS1_MOUSE
NC score	0.078768 (rank : 84)	θ value	0.813845 (rank : 52)
Query Neighborhood Hits	93	Target Neighborhood Hits	181	Shared Neighborhood Hits	10
SwissProt Accessions	Q8K4E0, Q6A084, Q8C9N9	Gene names	Alms1, Kiaa0328
Domain Architecture	No domain graphic available
Description	Alstrom syndrome protein 1 homolog.

A4_HUMAN
NC score	0.061284 (rank : 85)	θ value	0.125558 (rank : 37)
Query Neighborhood Hits	93	Target Neighborhood Hits	274	Shared Neighborhood Hits	6
SwissProt Accessions	P05067, P09000, P78438, Q13764, Q13778, Q13793, Q16011, Q16014, Q16019, Q16020, Q9BT38, Q9UCA9, Q9UCB6, Q9UCC8, Q9UCD1, Q9UQ58	Gene names	APP, A4, AD1
Domain Architecture	No domain graphic available
Description	Amyloid beta A4 protein precursor (APP) (ABPP) (Alzheimer disease amyloid protein) (Cerebral vascular amyloid peptide) (CVAP) (Protease nexin-II) (PN-II) (APPI) (PreA4) [Contains: Soluble APP-alpha (S-APP- alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); Gamma-CTF(59) (Gamma-secretase C-terminal fragment 59) (Amyloid intracellular domain 59) (AID(59)); Gamma-CTF(57) (Gamma- secretase C-terminal fragment 57) (Amyloid intracellular domain 57) (AID(57)); Gamma-CTF(50) (Gamma-secretase C-terminal fragment 50) (Amyloid intracellular domain 50) (AID(50)); C31].

A4_MOUSE
NC score	0.053650 (rank : 86)	θ value	0.813845 (rank : 51)
Query Neighborhood Hits	93	Target Neighborhood Hits	275	Shared Neighborhood Hits	9
SwissProt Accessions	P12023, P97487, P97942, Q99K32	Gene names	App
Domain Architecture	No domain graphic available
Description	Amyloid beta A4 protein precursor (APP) (ABPP) (Alzheimer disease amyloid protein homolog) (Amyloidogenic glycoprotein) (AG) [Contains: Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99 (APP-C99); Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); Gamma-CTF(59) (Gamma-secretase C-terminal fragment 59) (Amyloid intracellular domain 59) (AID(59)) (APP-C59); Gamma-CTF(57) (Gamma-secretase C-terminal fragment 57) (Amyloid intracellular domain 57) (AID(57)) (APP-C57); Gamma-CTF(50) (Gamma-secretase C-terminal fragment 50) (Amyloid intracellular domain 50) (AID(50)); C31].

CNOT3_HUMAN
NC score	0.023787 (rank : 87)	θ value	8.99809 (rank : 90)
Query Neighborhood Hits	93	Target Neighborhood Hits	425	Shared Neighborhood Hits	10
SwissProt Accessions	O75175, Q9NZN7, Q9UF76	Gene names	CNOT3, KIAA0691, NOT3
Domain Architecture
Description	CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3).

CNOT3_MOUSE
NC score	0.023463 (rank : 88)	θ value	6.88961 (rank : 81)
Query Neighborhood Hits	93	Target Neighborhood Hits	504	Shared Neighborhood Hits	9
SwissProt Accessions	Q8K0V4	Gene names	Cnot3, Not3
Domain Architecture
Description	CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3).

SFPQ_HUMAN
NC score	0.017286 (rank : 89)	θ value	6.88961 (rank : 84)
Query Neighborhood Hits	93	Target Neighborhood Hits	986	Shared Neighborhood Hits	16
SwissProt Accessions	P23246, P30808	Gene names	SFPQ, PSF
Domain Architecture
Description	Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100 kDa DNA-pairing protein) (hPOMp100).

MLL3_MOUSE
NC score	0.016245 (rank : 90)	θ value	5.27518 (rank : 79)
Query Neighborhood Hits	93	Target Neighborhood Hits	1399	Shared Neighborhood Hits	25
SwissProt Accessions	Q8BRH4, Q5YLV9, Q8BK12, Q8C6M3, Q923H5, Q923H6	Gene names	Mll3
Domain Architecture
Description	Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog (EC 2.1.1.43) (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3).

SFPQ_MOUSE
NC score	0.016193 (rank : 91)	θ value	6.88961 (rank : 85)
Query Neighborhood Hits	93	Target Neighborhood Hits	958	Shared Neighborhood Hits	16
SwissProt Accessions	Q8VIJ6, Q9ERW2	Gene names	Sfpq
Domain Architecture	No domain graphic available
Description	Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit).

MLL2_HUMAN
NC score	0.015246 (rank : 92)	θ value	8.99809 (rank : 92)
Query Neighborhood Hits	93	Target Neighborhood Hits	1788	Shared Neighborhood Hits	25
SwissProt Accessions	O14686, O14687	Gene names	MLL2, ALR
Domain Architecture
Description	Myeloid/lymphoid or mixed-lineage leukemia protein 2 (ALL1-related protein).

PITX3_MOUSE
NC score	0.013974 (rank : 93)	θ value	1.38821 (rank : 61)
Query Neighborhood Hits	93	Target Neighborhood Hits	380	Shared Neighborhood Hits	6
SwissProt Accessions	O35160	Gene names	Pitx3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

PITX3_HUMAN
NC score	0.013676 (rank : 94)	θ value	1.38821 (rank : 60)
Query Neighborhood Hits	93	Target Neighborhood Hits	366	Shared Neighborhood Hits	5
SwissProt Accessions	O75364	Gene names	PITX3, PTX3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

TRPC5_MOUSE
NC score	0.011267 (rank : 95)	θ value	8.99809 (rank : 93)
Query Neighborhood Hits	93	Target Neighborhood Hits	124	Shared Neighborhood Hits	3
SwissProt Accessions	Q9QX29, Q61059, Q9QWT1, Q9R0D4	Gene names	Trpc5, Trp5, Trrp5
Domain Architecture
Description	Short transient receptor potential channel 5 (TrpC5) (Transient receptor protein 5) (Mtrp5) (trp-related protein 5) (Capacitative calcium entry channel 2) (CCE2).

GOGA1_HUMAN
NC score	0.008294 (rank : 96)	θ value	8.99809 (rank : 91)
Query Neighborhood Hits	93	Target Neighborhood Hits	1222	Shared Neighborhood Hits	17
SwissProt Accessions	Q92805, Q8IYZ9	Gene names	GOLGA1
Domain Architecture
Description	Golgin subfamily A member 1 (Golgin-97).

ZN548_HUMAN
NC score	-0.003703 (rank : 97)	θ value	5.27518 (rank : 80)
Query Neighborhood Hits	93	Target Neighborhood Hits	739	Shared Neighborhood Hits	2
SwissProt Accessions	Q8NEK5, Q96M05	Gene names	ZNF548
Domain Architecture	No domain graphic available
Description	Zinc finger protein 548.