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Network neighborhood for query Sequence : PCBP3_HUMAN

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PCBP3_HUMAN
SwissProt Accessions	P57721, Q8N9K6, Q96EP6	Gene names	PCBP3
Domain Architecture
Description	Poly(rC)-binding protein 3 (Alpha-CP3).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

PCBP3_HUMAN
θ value	2.24492e-184 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	48	Target Neighborhood Hits	48	Shared Neighborhood Hits	48
SwissProt Accessions	P57721, Q8N9K6, Q96EP6	Gene names	PCBP3
Domain Architecture
Description	Poly(rC)-binding protein 3 (Alpha-CP3).

PCBP3_MOUSE
θ value	8.53067e-184 (rank : 2)	NC score	0.999961 (rank : 2)
Query Neighborhood Hits	48	Target Neighborhood Hits	48	Shared Neighborhood Hits	48
SwissProt Accessions	P57722, Q8BSB0, Q8C544	Gene names	Pcbp3
Domain Architecture
Description	Poly(rC)-binding protein 3 (Alpha-CP3).

PCBP2_MOUSE
θ value	1.20704e-137 (rank : 3)	NC score	0.988013 (rank : 3)
Query Neighborhood Hits	48	Target Neighborhood Hits	47	Shared Neighborhood Hits	33
SwissProt Accessions	Q61990, Q61383, Q62042	Gene names	Pcbp2, Cbp, Hnrnpx, Hnrpx
Domain Architecture
Description	Poly(rC)-binding protein 2 (Alpha-CP2) (Putative heterogeneous nuclear ribonucleoprotein X) (hnRNP X) (CTBP) (CBP).

PCBP2_HUMAN
θ value	3.28708e-135 (rank : 4)	NC score	0.987842 (rank : 4)
Query Neighborhood Hits	48	Target Neighborhood Hits	45	Shared Neighborhood Hits	33
SwissProt Accessions	Q15366, Q6PKG5	Gene names	PCBP2
Domain Architecture
Description	Poly(rC)-binding protein 2 (Alpha-CP2) (hnRNP-E2).

PCBP1_HUMAN
θ value	2.14053e-118 (rank : 5)	NC score	0.987727 (rank : 5)
Query Neighborhood Hits	48	Target Neighborhood Hits	37	Shared Neighborhood Hits	31
SwissProt Accessions	Q15365, Q13157, Q14975	Gene names	PCBP1
Domain Architecture
Description	Poly(rC)-binding protein 1 (Alpha-CP1) (hnRNP-E1) (Nucleic acid- binding protein SUB2.3).

PCBP1_MOUSE
θ value	2.14053e-118 (rank : 6)	NC score	0.987727 (rank : 6)
Query Neighborhood Hits	48	Target Neighborhood Hits	37	Shared Neighborhood Hits	31
SwissProt Accessions	P60335	Gene names	Pcbp1
Domain Architecture
Description	Poly(rC)-binding protein 1 (Alpha-CP1) (hnRNP-E1).

PCBP4_HUMAN
θ value	6.0463e-105 (rank : 7)	NC score	0.982940 (rank : 8)
Query Neighborhood Hits	48	Target Neighborhood Hits	49	Shared Neighborhood Hits	30
SwissProt Accessions	P57723, Q96AH7	Gene names	PCBP4
Domain Architecture
Description	Poly(rC)-binding protein 4 (Alpha-CP4).

PCBP4_MOUSE
θ value	6.0463e-105 (rank : 8)	NC score	0.984056 (rank : 7)
Query Neighborhood Hits	48	Target Neighborhood Hits	46	Shared Neighborhood Hits	30
SwissProt Accessions	P57724, Q91VR3	Gene names	Pcbp4
Domain Architecture
Description	Poly(rC)-binding protein 4 (Alpha-CP4).

NOVA2_HUMAN
θ value	1.92812e-18 (rank : 9)	NC score	0.767276 (rank : 12)
Query Neighborhood Hits	48	Target Neighborhood Hits	51	Shared Neighborhood Hits	35
SwissProt Accessions	Q9UNW9, O43267, Q9UEA1	Gene names	NOVA2, ANOVA, NOVA3
Domain Architecture
Description	RNA-binding protein Nova-2 (Neuro-oncological ventral antigen 2) (Astrocytic NOVA1-like RNA-binding protein).

HNRPK_HUMAN
θ value	1.24977e-17 (rank : 10)	NC score	0.816430 (rank : 9)
Query Neighborhood Hits	48	Target Neighborhood Hits	45	Shared Neighborhood Hits	33
SwissProt Accessions	P61978, Q07244, Q15671, Q60577, Q922Y7, Q96J62	Gene names	HNRPK, HNRNPK
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein K (hnRNP K) (Transformation up-regulated nuclear protein) (TUNP).

HNRPK_MOUSE
θ value	1.24977e-17 (rank : 11)	NC score	0.816430 (rank : 10)
Query Neighborhood Hits	48	Target Neighborhood Hits	45	Shared Neighborhood Hits	33
SwissProt Accessions	P61979, Q07244, Q15671, Q60577, Q8BGQ8, Q922Y7, Q96J62	Gene names	Hnrpk, Hnrnpk
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein K.

FUBP3_HUMAN
θ value	1.058e-16 (rank : 12)	NC score	0.655379 (rank : 13)
Query Neighborhood Hits	48	Target Neighborhood Hits	68	Shared Neighborhood Hits	35
SwissProt Accessions	Q96I24, Q92946, Q9BVB6	Gene names	FUBP3
Domain Architecture
Description	Far upstream element-binding protein 3 (FUSE-binding protein 3).

IF2B2_MOUSE
θ value	2.88119e-14 (rank : 13)	NC score	0.607038 (rank : 15)
Query Neighborhood Hits	48	Target Neighborhood Hits	148	Shared Neighborhood Hits	34
SwissProt Accessions	Q5SF07, Q3TCU4, Q7TQF9	Gene names	Igf2bp2, Imp2
Domain Architecture	No domain graphic available
Description	Insulin-like growth factor 2 mRNA-binding protein 2 (IGF-II mRNA- binding protein 2) (IMP-2).

IF2B2_HUMAN
θ value	8.38298e-14 (rank : 14)	NC score	0.606283 (rank : 16)
Query Neighborhood Hits	48	Target Neighborhood Hits	142	Shared Neighborhood Hits	34
SwissProt Accessions	Q9Y6M1	Gene names	IGF2BP2, IMP2
Domain Architecture	No domain graphic available
Description	Insulin-like growth factor 2 mRNA-binding protein 2 (IGF-II mRNA- binding protein 2) (IMP-2) (Hepatocellular carcinoma autoantigen p62).

NOVA1_HUMAN
θ value	9.26847e-13 (rank : 15)	NC score	0.767477 (rank : 11)
Query Neighborhood Hits	48	Target Neighborhood Hits	50	Shared Neighborhood Hits	34
SwissProt Accessions	P51513	Gene names	NOVA1
Domain Architecture
Description	RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) (Onconeural ventral antigen 1) (Paraneoplastic Ri antigen) (Ventral neuron-specific protein 1).

FUBP2_HUMAN
θ value	7.84624e-12 (rank : 16)	NC score	0.620129 (rank : 14)
Query Neighborhood Hits	48	Target Neighborhood Hits	145	Shared Neighborhood Hits	36
SwissProt Accessions	Q92945, O00301, Q9UNT5, Q9UQH5	Gene names	KHSRP, FUBP2
Domain Architecture
Description	Far upstream element-binding protein 2 (FUSE-binding protein 2) (KH type-splicing regulatory protein) (KSRP) (p75).

FUBP1_HUMAN
θ value	4.30538e-10 (rank : 17)	NC score	0.601196 (rank : 18)
Query Neighborhood Hits	48	Target Neighborhood Hits	136	Shared Neighborhood Hits	35
SwissProt Accessions	Q96AE4, Q12828	Gene names	FUBP1
Domain Architecture
Description	Far upstream element-binding protein 1 (FUSE-binding protein 1) (FBP) (DNA helicase V) (HDH V).

FUBP1_MOUSE
θ value	4.30538e-10 (rank : 18)	NC score	0.602161 (rank : 17)
Query Neighborhood Hits	48	Target Neighborhood Hits	144	Shared Neighborhood Hits	35
SwissProt Accessions	Q91WJ8, Q8C0Y8	Gene names	Fubp1, D3Ertd330e
Domain Architecture
Description	Far upstream element-binding protein 1 (FUSE-binding protein 1) (FBP).

TDRKH_HUMAN
θ value	0.000270298 (rank : 19)	NC score	0.438382 (rank : 19)
Query Neighborhood Hits	48	Target Neighborhood Hits	59	Shared Neighborhood Hits	32
SwissProt Accessions	Q9Y2W6, Q8N582, Q9NYV5	Gene names	TDRKH, TDRD2
Domain Architecture
Description	Tudor and KH domain-containing protein.

TDRKH_MOUSE
θ value	0.000270298 (rank : 20)	NC score	0.436084 (rank : 20)
Query Neighborhood Hits	48	Target Neighborhood Hits	59	Shared Neighborhood Hits	31
SwissProt Accessions	Q80VL1	Gene names	Tdrkh
Domain Architecture
Description	Tudor and KH domain-containing protein.

VIGLN_MOUSE
θ value	0.00102713 (rank : 21)	NC score	0.353499 (rank : 21)
Query Neighborhood Hits	48	Target Neighborhood Hits	80	Shared Neighborhood Hits	28
SwissProt Accessions	Q8VDJ3	Gene names	Hdlbp
Domain Architecture
Description	Vigilin (High density lipoprotein-binding protein) (HDL-binding protein).

VIGLN_HUMAN
θ value	0.00298849 (rank : 22)	NC score	0.351994 (rank : 22)
Query Neighborhood Hits	48	Target Neighborhood Hits	71	Shared Neighborhood Hits	28
SwissProt Accessions	Q00341, Q9UCY3	Gene names	HDLBP, HBP, VGL
Domain Architecture
Description	Vigilin (High density lipoprotein-binding protein) (HDL-binding protein).

RKHD1_HUMAN
θ value	0.0113563 (rank : 23)	NC score	0.243664 (rank : 23)
Query Neighborhood Hits	48	Target Neighborhood Hits	163	Shared Neighborhood Hits	24
SwissProt Accessions	Q86XN8	Gene names	RKHD1, KIAA2031
Domain Architecture
Description	RING finger and KH domain-containing protein 1.

AKAP1_HUMAN
θ value	0.0252991 (rank : 24)	NC score	0.219102 (rank : 24)
Query Neighborhood Hits	48	Target Neighborhood Hits	88	Shared Neighborhood Hits	27
SwissProt Accessions	Q92667, Q13320, Q9BW14	Gene names	AKAP1, AKAP149
Domain Architecture
Description	A kinase anchor protein 1, mitochondrial precursor (Protein kinase A- anchoring protein 1) (PRKA1) (A-kinase anchor protein 149 kDa) (AKAP 149) (Dual specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid A-kinase anchor protein 84) (S-AKAP84).

AKAP1_MOUSE
θ value	0.0736092 (rank : 25)	NC score	0.204868 (rank : 25)
Query Neighborhood Hits	48	Target Neighborhood Hits	198	Shared Neighborhood Hits	27
SwissProt Accessions	O08715, O08714, P97488	Gene names	Akap1, Akap
Domain Architecture
Description	A kinase anchor protein 1, mitochondrial precursor (Protein kinase A- anchoring protein 1) (PRKA1) (Dual specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid A-kinase anchor protein) (S-AKAP).

ZEP1_HUMAN
θ value	0.163984 (rank : 26)	NC score	0.015905 (rank : 40)
Query Neighborhood Hits	48	Target Neighborhood Hits	1036	Shared Neighborhood Hits	11
SwissProt Accessions	P15822, Q14122	Gene names	HIVEP1, ZNF40
Domain Architecture	No domain graphic available
Description	Zinc finger protein 40 (Human immunodeficiency virus type I enhancer- binding protein 1) (HIV-EP1) (Major histocompatibility complex-binding protein 1) (MBP-1) (Positive regulatory domain II-binding factor 1) (PRDII-BF1).

FXR2_HUMAN
θ value	0.21417 (rank : 27)	NC score	0.118428 (rank : 28)
Query Neighborhood Hits	48	Target Neighborhood Hits	77	Shared Neighborhood Hits	29
SwissProt Accessions	P51116, Q8WUM2	Gene names	FXR2
Domain Architecture
Description	Fragile X mental retardation syndrome-related protein 2.

SAM68_HUMAN
θ value	0.21417 (rank : 28)	NC score	0.147908 (rank : 26)
Query Neighborhood Hits	48	Target Neighborhood Hits	68	Shared Neighborhood Hits	23
SwissProt Accessions	Q07666, Q6PJX7, Q8NB97, Q99760	Gene names	KHDRBS1, SAM68
Domain Architecture	No domain graphic available
Description	KH domain-containing, RNA-binding, signal transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP- associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68).

SAM68_MOUSE
θ value	0.21417 (rank : 29)	NC score	0.145850 (rank : 27)
Query Neighborhood Hits	48	Target Neighborhood Hits	65	Shared Neighborhood Hits	23
SwissProt Accessions	Q60749, Q3U8T3, Q60735, Q99M33	Gene names	Khdrbs1
Domain Architecture	No domain graphic available
Description	KH domain-containing, RNA-binding, signal transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP- associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68).

DDX53_HUMAN
θ value	0.279714 (rank : 30)	NC score	0.054960 (rank : 34)
Query Neighborhood Hits	48	Target Neighborhood Hits	124	Shared Neighborhood Hits	24
SwissProt Accessions	Q86TM3, Q6NVV4	Gene names	DDX53, CAGE
Domain Architecture	No domain graphic available
Description	Probable ATP-dependent RNA helicase DDX53 (EC 3.6.1.-) (DEAD box protein 53) (DEAD box protein CAGE) (Cancer-associated gene protein).

MYST3_MOUSE
θ value	0.365318 (rank : 31)	NC score	0.017876 (rank : 38)
Query Neighborhood Hits	48	Target Neighborhood Hits	688	Shared Neighborhood Hits	4
SwissProt Accessions	Q8BZ21, Q8BW52, Q8BYH1, Q8C1F3	Gene names	Myst3, Moz
Domain Architecture	No domain graphic available
Description	Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-) (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Monocytic leukemia zinc finger protein) (Monocytic leukemia zinc finger homolog).

FMR1_HUMAN
θ value	1.38821 (rank : 32)	NC score	0.083747 (rank : 31)
Query Neighborhood Hits	48	Target Neighborhood Hits	45	Shared Neighborhood Hits	24
SwissProt Accessions	Q06787, Q16578, Q99054	Gene names	FMR1
Domain Architecture
Description	Fragile X mental retardation 1 protein (Protein FMR-1) (FMRP).

FMR1_MOUSE
θ value	1.38821 (rank : 33)	NC score	0.082184 (rank : 32)
Query Neighborhood Hits	48	Target Neighborhood Hits	47	Shared Neighborhood Hits	24
SwissProt Accessions	P35922	Gene names	Fmr1, Fmr-1
Domain Architecture
Description	Fragile X mental retardation protein 1 homolog (Protein FMR-1) (FMRP) (mFmr1p).

FXR1_HUMAN
θ value	2.36792 (rank : 34)	NC score	0.111850 (rank : 29)
Query Neighborhood Hits	48	Target Neighborhood Hits	50	Shared Neighborhood Hits	31
SwissProt Accessions	P51114, Q7Z450, Q8N6R8	Gene names	FXR1
Domain Architecture
Description	Fragile X mental retardation syndrome-related protein 1 (hFXR1P).

MAGI1_MOUSE
θ value	3.0926 (rank : 35)	NC score	0.012337 (rank : 42)
Query Neighborhood Hits	48	Target Neighborhood Hits	403	Shared Neighborhood Hits	7
SwissProt Accessions	Q6RHR9, O54893, O54894, O54895	Gene names	Magi1, Baiap1, Bap1
Domain Architecture	No domain graphic available
Description	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 (BAI1-associated protein 1) (BAP-1) (Membrane-associated guanylate kinase inverted 1) (MAGI-1).

PDE3A_MOUSE
θ value	3.0926 (rank : 36)	NC score	0.016061 (rank : 39)
Query Neighborhood Hits	48	Target Neighborhood Hits	115	Shared Neighborhood Hits	6
SwissProt Accessions	Q9Z0X4	Gene names	Pde3a
Domain Architecture
Description	cGMP-inhibited 3',5'-cyclic phosphodiesterase A (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase A) (CGI-PDE A).

PNPT1_HUMAN
θ value	3.0926 (rank : 37)	NC score	0.049554 (rank : 35)
Query Neighborhood Hits	48	Target Neighborhood Hits	30	Shared Neighborhood Hits	18
SwissProt Accessions	Q8TCS8, Q53SU0, Q68CN1, Q7Z7D1, Q8IWX1, Q96T05, Q9BRU3, Q9BVX0	Gene names	PNPT1, PNPASE
Domain Architecture	No domain graphic available
Description	Polyribonucleotide nucleotidyltransferase 1, mitochondrial precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide phosphorylase-like protein) (PNPase old-35) (3'-5' RNA exonuclease OLD35).

FXR1_MOUSE
θ value	4.03905 (rank : 38)	NC score	0.109562 (rank : 30)
Query Neighborhood Hits	48	Target Neighborhood Hits	49	Shared Neighborhood Hits	31
SwissProt Accessions	Q61584, Q8VCU4, Q9R1E2, Q9R1E3, Q9R1E4, Q9R1E5, Q9WUA7, Q9WUA8, Q9WUA9	Gene names	Fxr1, Fxr1h
Domain Architecture
Description	Fragile X mental retardation syndrome-related protein 1 (mFxr1p).

FXR2_MOUSE
θ value	4.03905 (rank : 39)	NC score	0.068711 (rank : 33)
Query Neighborhood Hits	48	Target Neighborhood Hits	66	Shared Neighborhood Hits	20
SwissProt Accessions	Q9WVR4, Q9WVR5	Gene names	Fxr2, Fxr2h
Domain Architecture
Description	Fragile X mental retardation syndrome-related protein 2.

MAGI1_HUMAN
θ value	4.03905 (rank : 40)	NC score	0.012122 (rank : 43)
Query Neighborhood Hits	48	Target Neighborhood Hits	388	Shared Neighborhood Hits	8
SwissProt Accessions	Q96QZ7, O00309, O43863, O75085, Q96QZ8, Q96QZ9	Gene names	MAGI1, BAIAP1, BAP1, TNRC19
Domain Architecture	No domain graphic available
Description	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 (BAI1-associated protein 1) (BAP-1) (Membrane-associated guanylate kinase inverted 1) (MAGI-1) (Atrophin-1-interacting protein 3) (AIP3) (WW domain-containing protein 3) (WWP3) (Trinucleotide repeat-containing gene 19 protein).

PNPT1_MOUSE
θ value	4.03905 (rank : 41)	NC score	0.044047 (rank : 36)
Query Neighborhood Hits	48	Target Neighborhood Hits	21	Shared Neighborhood Hits	13
SwissProt Accessions	Q8K1R3, Q3UEP9, Q810U7, Q812B3, Q8R2U3, Q9DC52	Gene names	Pnpt1, Pnpase
Domain Architecture	No domain graphic available
Description	Polyribonucleotide nucleotidyltransferase 1, mitochondrial precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide phosphorylase-like protein) (PNPase old-35) (3'-5' RNA exonuclease OLD35).

PO6F2_MOUSE
θ value	4.03905 (rank : 42)	NC score	0.015332 (rank : 41)
Query Neighborhood Hits	48	Target Neighborhood Hits	639	Shared Neighborhood Hits	10
SwissProt Accessions	Q8BJI4	Gene names	Pou6f2
Domain Architecture	No domain graphic available
Description	POU domain, class 6, transcription factor 2.

ZEP1_MOUSE
θ value	4.03905 (rank : 43)	NC score	0.009293 (rank : 45)
Query Neighborhood Hits	48	Target Neighborhood Hits	1063	Shared Neighborhood Hits	5
SwissProt Accessions	Q03172	Gene names	Hivep1, Cryabp1, Znf40
Domain Architecture
Description	Zinc finger protein 40 (Transcription factor alphaA-CRYBP1) (Alpha A- crystallin-binding protein I) (Alpha A-CRYBP1).

PO6F2_HUMAN
θ value	5.27518 (rank : 44)	NC score	0.009307 (rank : 44)
Query Neighborhood Hits	48	Target Neighborhood Hits	618	Shared Neighborhood Hits	7
SwissProt Accessions	P78424, P78425, Q75ME8, Q86UM6, Q9UDS7	Gene names	POU6F2, RPF1
Domain Architecture
Description	POU domain, class 6, transcription factor 2 (Retina-derived POU-domain factor 1) (RPF-1).

CC036_HUMAN
θ value	6.88961 (rank : 45)	NC score	0.030272 (rank : 37)
Query Neighborhood Hits	48	Target Neighborhood Hits	27	Shared Neighborhood Hits	4
SwissProt Accessions	Q3SXR2, Q3SXR3, Q9H6K8	Gene names	C3orf36
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C3orf36.

NCOA1_HUMAN
θ value	6.88961 (rank : 46)	NC score	0.008046 (rank : 46)
Query Neighborhood Hits	48	Target Neighborhood Hits	198	Shared Neighborhood Hits	6
SwissProt Accessions	Q15788, O00150, O43792, O43793, Q13071, Q13420, Q6GVI5, Q7KYV3	Gene names	NCOA1, SRC1
Domain Architecture	No domain graphic available
Description	Nuclear receptor coactivator 1 (EC 2.3.1.48) (NCoA-1) (Steroid receptor coactivator 1) (SRC-1) (RIP160) (Protein Hin-2) (NY-REN-52 antigen).

PCLO_MOUSE
θ value	6.88961 (rank : 47)	NC score	0.006178 (rank : 48)
Query Neighborhood Hits	48	Target Neighborhood Hits	2275	Shared Neighborhood Hits	18
SwissProt Accessions	Q9QYX7, Q8CF91, Q8CF92, Q9QYX6, Q9QZJ0	Gene names	Pclo, Acz
Domain Architecture
Description	Protein piccolo (Aczonin) (Multidomain presynaptic cytomatrix protein) (Brain-derived HLMN protein).

SETX_HUMAN
θ value	8.99809 (rank : 48)	NC score	0.007971 (rank : 47)
Query Neighborhood Hits	48	Target Neighborhood Hits	368	Shared Neighborhood Hits	3
SwissProt Accessions	Q7Z333, O75120, Q3KQX4, Q68DW5, Q6AZD7, Q7Z3J6, Q8WX33, Q9H9D1, Q9NVP9	Gene names	SETX, ALS4, KIAA0625, SCAR1
Domain Architecture
Description	Probable helicase senataxin (EC 3.6.1.-) (SEN1 homolog).

Hits sorted by NC score

PCBP3_HUMAN
NC score	0.999962 (rank : 1)	θ value	2.24492e-184 (rank : 1)
Query Neighborhood Hits	48	Target Neighborhood Hits	48	Shared Neighborhood Hits	48
SwissProt Accessions	P57721, Q8N9K6, Q96EP6	Gene names	PCBP3
Domain Architecture
Description	Poly(rC)-binding protein 3 (Alpha-CP3).

PCBP3_MOUSE
NC score	0.999961 (rank : 2)	θ value	8.53067e-184 (rank : 2)
Query Neighborhood Hits	48	Target Neighborhood Hits	48	Shared Neighborhood Hits	48
SwissProt Accessions	P57722, Q8BSB0, Q8C544	Gene names	Pcbp3
Domain Architecture
Description	Poly(rC)-binding protein 3 (Alpha-CP3).

PCBP2_MOUSE
NC score	0.988013 (rank : 3)	θ value	1.20704e-137 (rank : 3)
Query Neighborhood Hits	48	Target Neighborhood Hits	47	Shared Neighborhood Hits	33
SwissProt Accessions	Q61990, Q61383, Q62042	Gene names	Pcbp2, Cbp, Hnrnpx, Hnrpx
Domain Architecture
Description	Poly(rC)-binding protein 2 (Alpha-CP2) (Putative heterogeneous nuclear ribonucleoprotein X) (hnRNP X) (CTBP) (CBP).

PCBP2_HUMAN
NC score	0.987842 (rank : 4)	θ value	3.28708e-135 (rank : 4)
Query Neighborhood Hits	48	Target Neighborhood Hits	45	Shared Neighborhood Hits	33
SwissProt Accessions	Q15366, Q6PKG5	Gene names	PCBP2
Domain Architecture
Description	Poly(rC)-binding protein 2 (Alpha-CP2) (hnRNP-E2).

PCBP1_HUMAN
NC score	0.987727 (rank : 5)	θ value	2.14053e-118 (rank : 5)
Query Neighborhood Hits	48	Target Neighborhood Hits	37	Shared Neighborhood Hits	31
SwissProt Accessions	Q15365, Q13157, Q14975	Gene names	PCBP1
Domain Architecture
Description	Poly(rC)-binding protein 1 (Alpha-CP1) (hnRNP-E1) (Nucleic acid- binding protein SUB2.3).

PCBP1_MOUSE
NC score	0.987727 (rank : 6)	θ value	2.14053e-118 (rank : 6)
Query Neighborhood Hits	48	Target Neighborhood Hits	37	Shared Neighborhood Hits	31
SwissProt Accessions	P60335	Gene names	Pcbp1
Domain Architecture
Description	Poly(rC)-binding protein 1 (Alpha-CP1) (hnRNP-E1).

PCBP4_MOUSE
NC score	0.984056 (rank : 7)	θ value	6.0463e-105 (rank : 8)
Query Neighborhood Hits	48	Target Neighborhood Hits	46	Shared Neighborhood Hits	30
SwissProt Accessions	P57724, Q91VR3	Gene names	Pcbp4
Domain Architecture
Description	Poly(rC)-binding protein 4 (Alpha-CP4).

PCBP4_HUMAN
NC score	0.982940 (rank : 8)	θ value	6.0463e-105 (rank : 7)
Query Neighborhood Hits	48	Target Neighborhood Hits	49	Shared Neighborhood Hits	30
SwissProt Accessions	P57723, Q96AH7	Gene names	PCBP4
Domain Architecture
Description	Poly(rC)-binding protein 4 (Alpha-CP4).

HNRPK_HUMAN
NC score	0.816430 (rank : 9)	θ value	1.24977e-17 (rank : 10)
Query Neighborhood Hits	48	Target Neighborhood Hits	45	Shared Neighborhood Hits	33
SwissProt Accessions	P61978, Q07244, Q15671, Q60577, Q922Y7, Q96J62	Gene names	HNRPK, HNRNPK
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein K (hnRNP K) (Transformation up-regulated nuclear protein) (TUNP).

HNRPK_MOUSE
NC score	0.816430 (rank : 10)	θ value	1.24977e-17 (rank : 11)
Query Neighborhood Hits	48	Target Neighborhood Hits	45	Shared Neighborhood Hits	33
SwissProt Accessions	P61979, Q07244, Q15671, Q60577, Q8BGQ8, Q922Y7, Q96J62	Gene names	Hnrpk, Hnrnpk
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein K.

NOVA1_HUMAN
NC score	0.767477 (rank : 11)	θ value	9.26847e-13 (rank : 15)
Query Neighborhood Hits	48	Target Neighborhood Hits	50	Shared Neighborhood Hits	34
SwissProt Accessions	P51513	Gene names	NOVA1
Domain Architecture
Description	RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) (Onconeural ventral antigen 1) (Paraneoplastic Ri antigen) (Ventral neuron-specific protein 1).

NOVA2_HUMAN
NC score	0.767276 (rank : 12)	θ value	1.92812e-18 (rank : 9)
Query Neighborhood Hits	48	Target Neighborhood Hits	51	Shared Neighborhood Hits	35
SwissProt Accessions	Q9UNW9, O43267, Q9UEA1	Gene names	NOVA2, ANOVA, NOVA3
Domain Architecture
Description	RNA-binding protein Nova-2 (Neuro-oncological ventral antigen 2) (Astrocytic NOVA1-like RNA-binding protein).

FUBP3_HUMAN
NC score	0.655379 (rank : 13)	θ value	1.058e-16 (rank : 12)
Query Neighborhood Hits	48	Target Neighborhood Hits	68	Shared Neighborhood Hits	35
SwissProt Accessions	Q96I24, Q92946, Q9BVB6	Gene names	FUBP3
Domain Architecture
Description	Far upstream element-binding protein 3 (FUSE-binding protein 3).

FUBP2_HUMAN
NC score	0.620129 (rank : 14)	θ value	7.84624e-12 (rank : 16)
Query Neighborhood Hits	48	Target Neighborhood Hits	145	Shared Neighborhood Hits	36
SwissProt Accessions	Q92945, O00301, Q9UNT5, Q9UQH5	Gene names	KHSRP, FUBP2
Domain Architecture
Description	Far upstream element-binding protein 2 (FUSE-binding protein 2) (KH type-splicing regulatory protein) (KSRP) (p75).

IF2B2_MOUSE
NC score	0.607038 (rank : 15)	θ value	2.88119e-14 (rank : 13)
Query Neighborhood Hits	48	Target Neighborhood Hits	148	Shared Neighborhood Hits	34
SwissProt Accessions	Q5SF07, Q3TCU4, Q7TQF9	Gene names	Igf2bp2, Imp2
Domain Architecture	No domain graphic available
Description	Insulin-like growth factor 2 mRNA-binding protein 2 (IGF-II mRNA- binding protein 2) (IMP-2).

IF2B2_HUMAN
NC score	0.606283 (rank : 16)	θ value	8.38298e-14 (rank : 14)
Query Neighborhood Hits	48	Target Neighborhood Hits	142	Shared Neighborhood Hits	34
SwissProt Accessions	Q9Y6M1	Gene names	IGF2BP2, IMP2
Domain Architecture	No domain graphic available
Description	Insulin-like growth factor 2 mRNA-binding protein 2 (IGF-II mRNA- binding protein 2) (IMP-2) (Hepatocellular carcinoma autoantigen p62).

FUBP1_MOUSE
NC score	0.602161 (rank : 17)	θ value	4.30538e-10 (rank : 18)
Query Neighborhood Hits	48	Target Neighborhood Hits	144	Shared Neighborhood Hits	35
SwissProt Accessions	Q91WJ8, Q8C0Y8	Gene names	Fubp1, D3Ertd330e
Domain Architecture
Description	Far upstream element-binding protein 1 (FUSE-binding protein 1) (FBP).

FUBP1_HUMAN
NC score	0.601196 (rank : 18)	θ value	4.30538e-10 (rank : 17)
Query Neighborhood Hits	48	Target Neighborhood Hits	136	Shared Neighborhood Hits	35
SwissProt Accessions	Q96AE4, Q12828	Gene names	FUBP1
Domain Architecture
Description	Far upstream element-binding protein 1 (FUSE-binding protein 1) (FBP) (DNA helicase V) (HDH V).

TDRKH_HUMAN
NC score	0.438382 (rank : 19)	θ value	0.000270298 (rank : 19)
Query Neighborhood Hits	48	Target Neighborhood Hits	59	Shared Neighborhood Hits	32
SwissProt Accessions	Q9Y2W6, Q8N582, Q9NYV5	Gene names	TDRKH, TDRD2
Domain Architecture
Description	Tudor and KH domain-containing protein.

TDRKH_MOUSE
NC score	0.436084 (rank : 20)	θ value	0.000270298 (rank : 20)
Query Neighborhood Hits	48	Target Neighborhood Hits	59	Shared Neighborhood Hits	31
SwissProt Accessions	Q80VL1	Gene names	Tdrkh
Domain Architecture
Description	Tudor and KH domain-containing protein.

VIGLN_MOUSE
NC score	0.353499 (rank : 21)	θ value	0.00102713 (rank : 21)
Query Neighborhood Hits	48	Target Neighborhood Hits	80	Shared Neighborhood Hits	28
SwissProt Accessions	Q8VDJ3	Gene names	Hdlbp
Domain Architecture
Description	Vigilin (High density lipoprotein-binding protein) (HDL-binding protein).

VIGLN_HUMAN
NC score	0.351994 (rank : 22)	θ value	0.00298849 (rank : 22)
Query Neighborhood Hits	48	Target Neighborhood Hits	71	Shared Neighborhood Hits	28
SwissProt Accessions	Q00341, Q9UCY3	Gene names	HDLBP, HBP, VGL
Domain Architecture
Description	Vigilin (High density lipoprotein-binding protein) (HDL-binding protein).

RKHD1_HUMAN
NC score	0.243664 (rank : 23)	θ value	0.0113563 (rank : 23)
Query Neighborhood Hits	48	Target Neighborhood Hits	163	Shared Neighborhood Hits	24
SwissProt Accessions	Q86XN8	Gene names	RKHD1, KIAA2031
Domain Architecture
Description	RING finger and KH domain-containing protein 1.

AKAP1_HUMAN
NC score	0.219102 (rank : 24)	θ value	0.0252991 (rank : 24)
Query Neighborhood Hits	48	Target Neighborhood Hits	88	Shared Neighborhood Hits	27
SwissProt Accessions	Q92667, Q13320, Q9BW14	Gene names	AKAP1, AKAP149
Domain Architecture
Description	A kinase anchor protein 1, mitochondrial precursor (Protein kinase A- anchoring protein 1) (PRKA1) (A-kinase anchor protein 149 kDa) (AKAP 149) (Dual specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid A-kinase anchor protein 84) (S-AKAP84).

AKAP1_MOUSE
NC score	0.204868 (rank : 25)	θ value	0.0736092 (rank : 25)
Query Neighborhood Hits	48	Target Neighborhood Hits	198	Shared Neighborhood Hits	27
SwissProt Accessions	O08715, O08714, P97488	Gene names	Akap1, Akap
Domain Architecture
Description	A kinase anchor protein 1, mitochondrial precursor (Protein kinase A- anchoring protein 1) (PRKA1) (Dual specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid A-kinase anchor protein) (S-AKAP).

SAM68_HUMAN
NC score	0.147908 (rank : 26)	θ value	0.21417 (rank : 28)
Query Neighborhood Hits	48	Target Neighborhood Hits	68	Shared Neighborhood Hits	23
SwissProt Accessions	Q07666, Q6PJX7, Q8NB97, Q99760	Gene names	KHDRBS1, SAM68
Domain Architecture	No domain graphic available
Description	KH domain-containing, RNA-binding, signal transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP- associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68).

SAM68_MOUSE
NC score	0.145850 (rank : 27)	θ value	0.21417 (rank : 29)
Query Neighborhood Hits	48	Target Neighborhood Hits	65	Shared Neighborhood Hits	23
SwissProt Accessions	Q60749, Q3U8T3, Q60735, Q99M33	Gene names	Khdrbs1
Domain Architecture	No domain graphic available
Description	KH domain-containing, RNA-binding, signal transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP- associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68).

FXR2_HUMAN
NC score	0.118428 (rank : 28)	θ value	0.21417 (rank : 27)
Query Neighborhood Hits	48	Target Neighborhood Hits	77	Shared Neighborhood Hits	29
SwissProt Accessions	P51116, Q8WUM2	Gene names	FXR2
Domain Architecture
Description	Fragile X mental retardation syndrome-related protein 2.

FXR1_HUMAN
NC score	0.111850 (rank : 29)	θ value	2.36792 (rank : 34)
Query Neighborhood Hits	48	Target Neighborhood Hits	50	Shared Neighborhood Hits	31
SwissProt Accessions	P51114, Q7Z450, Q8N6R8	Gene names	FXR1
Domain Architecture
Description	Fragile X mental retardation syndrome-related protein 1 (hFXR1P).

FXR1_MOUSE
NC score	0.109562 (rank : 30)	θ value	4.03905 (rank : 38)
Query Neighborhood Hits	48	Target Neighborhood Hits	49	Shared Neighborhood Hits	31
SwissProt Accessions	Q61584, Q8VCU4, Q9R1E2, Q9R1E3, Q9R1E4, Q9R1E5, Q9WUA7, Q9WUA8, Q9WUA9	Gene names	Fxr1, Fxr1h
Domain Architecture
Description	Fragile X mental retardation syndrome-related protein 1 (mFxr1p).

FMR1_HUMAN
NC score	0.083747 (rank : 31)	θ value	1.38821 (rank : 32)
Query Neighborhood Hits	48	Target Neighborhood Hits	45	Shared Neighborhood Hits	24
SwissProt Accessions	Q06787, Q16578, Q99054	Gene names	FMR1
Domain Architecture
Description	Fragile X mental retardation 1 protein (Protein FMR-1) (FMRP).

FMR1_MOUSE
NC score	0.082184 (rank : 32)	θ value	1.38821 (rank : 33)
Query Neighborhood Hits	48	Target Neighborhood Hits	47	Shared Neighborhood Hits	24
SwissProt Accessions	P35922	Gene names	Fmr1, Fmr-1
Domain Architecture
Description	Fragile X mental retardation protein 1 homolog (Protein FMR-1) (FMRP) (mFmr1p).

FXR2_MOUSE
NC score	0.068711 (rank : 33)	θ value	4.03905 (rank : 39)
Query Neighborhood Hits	48	Target Neighborhood Hits	66	Shared Neighborhood Hits	20
SwissProt Accessions	Q9WVR4, Q9WVR5	Gene names	Fxr2, Fxr2h
Domain Architecture
Description	Fragile X mental retardation syndrome-related protein 2.

DDX53_HUMAN
NC score	0.054960 (rank : 34)	θ value	0.279714 (rank : 30)
Query Neighborhood Hits	48	Target Neighborhood Hits	124	Shared Neighborhood Hits	24
SwissProt Accessions	Q86TM3, Q6NVV4	Gene names	DDX53, CAGE
Domain Architecture	No domain graphic available
Description	Probable ATP-dependent RNA helicase DDX53 (EC 3.6.1.-) (DEAD box protein 53) (DEAD box protein CAGE) (Cancer-associated gene protein).

PNPT1_HUMAN
NC score	0.049554 (rank : 35)	θ value	3.0926 (rank : 37)
Query Neighborhood Hits	48	Target Neighborhood Hits	30	Shared Neighborhood Hits	18
SwissProt Accessions	Q8TCS8, Q53SU0, Q68CN1, Q7Z7D1, Q8IWX1, Q96T05, Q9BRU3, Q9BVX0	Gene names	PNPT1, PNPASE
Domain Architecture	No domain graphic available
Description	Polyribonucleotide nucleotidyltransferase 1, mitochondrial precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide phosphorylase-like protein) (PNPase old-35) (3'-5' RNA exonuclease OLD35).

PNPT1_MOUSE
NC score	0.044047 (rank : 36)	θ value	4.03905 (rank : 41)
Query Neighborhood Hits	48	Target Neighborhood Hits	21	Shared Neighborhood Hits	13
SwissProt Accessions	Q8K1R3, Q3UEP9, Q810U7, Q812B3, Q8R2U3, Q9DC52	Gene names	Pnpt1, Pnpase
Domain Architecture	No domain graphic available
Description	Polyribonucleotide nucleotidyltransferase 1, mitochondrial precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide phosphorylase-like protein) (PNPase old-35) (3'-5' RNA exonuclease OLD35).

CC036_HUMAN
NC score	0.030272 (rank : 37)	θ value	6.88961 (rank : 45)
Query Neighborhood Hits	48	Target Neighborhood Hits	27	Shared Neighborhood Hits	4
SwissProt Accessions	Q3SXR2, Q3SXR3, Q9H6K8	Gene names	C3orf36
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C3orf36.

MYST3_MOUSE
NC score	0.017876 (rank : 38)	θ value	0.365318 (rank : 31)
Query Neighborhood Hits	48	Target Neighborhood Hits	688	Shared Neighborhood Hits	4
SwissProt Accessions	Q8BZ21, Q8BW52, Q8BYH1, Q8C1F3	Gene names	Myst3, Moz
Domain Architecture	No domain graphic available
Description	Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-) (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Monocytic leukemia zinc finger protein) (Monocytic leukemia zinc finger homolog).

PDE3A_MOUSE
NC score	0.016061 (rank : 39)	θ value	3.0926 (rank : 36)
Query Neighborhood Hits	48	Target Neighborhood Hits	115	Shared Neighborhood Hits	6
SwissProt Accessions	Q9Z0X4	Gene names	Pde3a
Domain Architecture
Description	cGMP-inhibited 3',5'-cyclic phosphodiesterase A (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase A) (CGI-PDE A).

ZEP1_HUMAN
NC score	0.015905 (rank : 40)	θ value	0.163984 (rank : 26)
Query Neighborhood Hits	48	Target Neighborhood Hits	1036	Shared Neighborhood Hits	11
SwissProt Accessions	P15822, Q14122	Gene names	HIVEP1, ZNF40
Domain Architecture	No domain graphic available
Description	Zinc finger protein 40 (Human immunodeficiency virus type I enhancer- binding protein 1) (HIV-EP1) (Major histocompatibility complex-binding protein 1) (MBP-1) (Positive regulatory domain II-binding factor 1) (PRDII-BF1).

PO6F2_MOUSE
NC score	0.015332 (rank : 41)	θ value	4.03905 (rank : 42)
Query Neighborhood Hits	48	Target Neighborhood Hits	639	Shared Neighborhood Hits	10
SwissProt Accessions	Q8BJI4	Gene names	Pou6f2
Domain Architecture	No domain graphic available
Description	POU domain, class 6, transcription factor 2.

MAGI1_MOUSE
NC score	0.012337 (rank : 42)	θ value	3.0926 (rank : 35)
Query Neighborhood Hits	48	Target Neighborhood Hits	403	Shared Neighborhood Hits	7
SwissProt Accessions	Q6RHR9, O54893, O54894, O54895	Gene names	Magi1, Baiap1, Bap1
Domain Architecture	No domain graphic available
Description	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 (BAI1-associated protein 1) (BAP-1) (Membrane-associated guanylate kinase inverted 1) (MAGI-1).

MAGI1_HUMAN
NC score	0.012122 (rank : 43)	θ value	4.03905 (rank : 40)
Query Neighborhood Hits	48	Target Neighborhood Hits	388	Shared Neighborhood Hits	8
SwissProt Accessions	Q96QZ7, O00309, O43863, O75085, Q96QZ8, Q96QZ9	Gene names	MAGI1, BAIAP1, BAP1, TNRC19
Domain Architecture	No domain graphic available
Description	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 (BAI1-associated protein 1) (BAP-1) (Membrane-associated guanylate kinase inverted 1) (MAGI-1) (Atrophin-1-interacting protein 3) (AIP3) (WW domain-containing protein 3) (WWP3) (Trinucleotide repeat-containing gene 19 protein).

PO6F2_HUMAN
NC score	0.009307 (rank : 44)	θ value	5.27518 (rank : 44)
Query Neighborhood Hits	48	Target Neighborhood Hits	618	Shared Neighborhood Hits	7
SwissProt Accessions	P78424, P78425, Q75ME8, Q86UM6, Q9UDS7	Gene names	POU6F2, RPF1
Domain Architecture
Description	POU domain, class 6, transcription factor 2 (Retina-derived POU-domain factor 1) (RPF-1).

ZEP1_MOUSE
NC score	0.009293 (rank : 45)	θ value	4.03905 (rank : 43)
Query Neighborhood Hits	48	Target Neighborhood Hits	1063	Shared Neighborhood Hits	5
SwissProt Accessions	Q03172	Gene names	Hivep1, Cryabp1, Znf40
Domain Architecture
Description	Zinc finger protein 40 (Transcription factor alphaA-CRYBP1) (Alpha A- crystallin-binding protein I) (Alpha A-CRYBP1).

NCOA1_HUMAN
NC score	0.008046 (rank : 46)	θ value	6.88961 (rank : 46)
Query Neighborhood Hits	48	Target Neighborhood Hits	198	Shared Neighborhood Hits	6
SwissProt Accessions	Q15788, O00150, O43792, O43793, Q13071, Q13420, Q6GVI5, Q7KYV3	Gene names	NCOA1, SRC1
Domain Architecture	No domain graphic available
Description	Nuclear receptor coactivator 1 (EC 2.3.1.48) (NCoA-1) (Steroid receptor coactivator 1) (SRC-1) (RIP160) (Protein Hin-2) (NY-REN-52 antigen).

SETX_HUMAN
NC score	0.007971 (rank : 47)	θ value	8.99809 (rank : 48)
Query Neighborhood Hits	48	Target Neighborhood Hits	368	Shared Neighborhood Hits	3
SwissProt Accessions	Q7Z333, O75120, Q3KQX4, Q68DW5, Q6AZD7, Q7Z3J6, Q8WX33, Q9H9D1, Q9NVP9	Gene names	SETX, ALS4, KIAA0625, SCAR1
Domain Architecture
Description	Probable helicase senataxin (EC 3.6.1.-) (SEN1 homolog).

PCLO_MOUSE
NC score	0.006178 (rank : 48)	θ value	6.88961 (rank : 47)
Query Neighborhood Hits	48	Target Neighborhood Hits	2275	Shared Neighborhood Hits	18
SwissProt Accessions	Q9QYX7, Q8CF91, Q8CF92, Q9QYX6, Q9QZJ0	Gene names	Pclo, Acz
Domain Architecture
Description	Protein piccolo (Aczonin) (Multidomain presynaptic cytomatrix protein) (Brain-derived HLMN protein).