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Network neighborhood for query Sequence : PNPT1_MOUSE

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PNPT1_MOUSE
SwissProt Accessions	Q8K1R3, Q3UEP9, Q810U7, Q812B3, Q8R2U3, Q9DC52	Gene names	Pnpt1, Pnpase
Domain Architecture	No domain graphic available
Description	Polyribonucleotide nucleotidyltransferase 1, mitochondrial precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide phosphorylase-like protein) (PNPase old-35) (3'-5' RNA exonuclease OLD35).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

PNPT1_HUMAN
θ value	0 (rank : 1)	NC score	0.998268 (rank : 2)
Query Neighborhood Hits	21	Target Neighborhood Hits	30	Shared Neighborhood Hits	20
SwissProt Accessions	Q8TCS8, Q53SU0, Q68CN1, Q7Z7D1, Q8IWX1, Q96T05, Q9BRU3, Q9BVX0	Gene names	PNPT1, PNPASE
Domain Architecture	No domain graphic available
Description	Polyribonucleotide nucleotidyltransferase 1, mitochondrial precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide phosphorylase-like protein) (PNPase old-35) (3'-5' RNA exonuclease OLD35).

PNPT1_MOUSE
θ value	0 (rank : 2)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	21	Target Neighborhood Hits	21	Shared Neighborhood Hits	21
SwissProt Accessions	Q8K1R3, Q3UEP9, Q810U7, Q812B3, Q8R2U3, Q9DC52	Gene names	Pnpt1, Pnpase
Domain Architecture	No domain graphic available
Description	Polyribonucleotide nucleotidyltransferase 1, mitochondrial precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide phosphorylase-like protein) (PNPase old-35) (3'-5' RNA exonuclease OLD35).

EXOS4_MOUSE
θ value	0.000461057 (rank : 3)	NC score	0.252478 (rank : 3)
Query Neighborhood Hits	21	Target Neighborhood Hits	8	Shared Neighborhood Hits	6
SwissProt Accessions	Q921I9	Gene names	Exosc4, Rrp41
Domain Architecture
Description	Exosome complex exonuclease RRP41 (EC 3.1.13.-) (Ribosomal RNA- processing protein 41) (Exosome component 4).

EXOS4_HUMAN
θ value	0.00175202 (rank : 4)	NC score	0.237215 (rank : 4)
Query Neighborhood Hits	21	Target Neighborhood Hits	8	Shared Neighborhood Hits	6
SwissProt Accessions	Q9NPD3	Gene names	EXOSC4, RRP41, SKI6
Domain Architecture
Description	Exosome complex exonuclease RRP41 (EC 3.1.13.-) (Ribosomal RNA- processing protein 41) (Exosome component 4) (p12A).

NOVA2_HUMAN
θ value	0.125558 (rank : 5)	NC score	0.104832 (rank : 6)
Query Neighborhood Hits	21	Target Neighborhood Hits	51	Shared Neighborhood Hits	12
SwissProt Accessions	Q9UNW9, O43267, Q9UEA1	Gene names	NOVA2, ANOVA, NOVA3
Domain Architecture
Description	RNA-binding protein Nova-2 (Neuro-oncological ventral antigen 2) (Astrocytic NOVA1-like RNA-binding protein).

EXOS8_HUMAN
θ value	0.279714 (rank : 6)	NC score	0.109575 (rank : 5)
Query Neighborhood Hits	21	Target Neighborhood Hits	10	Shared Neighborhood Hits	6
SwissProt Accessions	Q96B26, O43480	Gene names	EXOSC8, OIP2, RRP43
Domain Architecture
Description	Exosome complex exonuclease RRP43 (EC 3.1.13.-) (Ribosomal RNA- processing protein 43) (Exosome component 8) (p9) (Opa-interacting protein 2).

EXOS8_MOUSE
θ value	0.47712 (rank : 7)	NC score	0.102920 (rank : 7)
Query Neighborhood Hits	21	Target Neighborhood Hits	10	Shared Neighborhood Hits	6
SwissProt Accessions	Q9D753	Gene names	Exosc8, Rrp43
Domain Architecture	No domain graphic available
Description	Exosome complex exonuclease RRP43 (EC 3.1.13.-) (Ribosomal RNA- processing protein 43) (Exosome component 8).

NO40_HUMAN
θ value	1.38821 (rank : 8)	NC score	0.096444 (rank : 8)
Query Neighborhood Hits	21	Target Neighborhood Hits	47	Shared Neighborhood Hits	4
SwissProt Accessions	Q9NP64, Q6PKH4, Q9NYG4, Q9P0M8	Gene names	ZCCHC17, PS1D
Domain Architecture	No domain graphic available
Description	Nucleolar protein of 40 kDa (pNO40) (Zinc finger CCHC domain- containing protein 17) (Putative S1 RNA-binding domain protein) (PS1D protein) (Pnn-interacting nucleolar protein).

NO40_MOUSE
θ value	1.38821 (rank : 9)	NC score	0.096102 (rank : 9)
Query Neighborhood Hits	21	Target Neighborhood Hits	53	Shared Neighborhood Hits	4
SwissProt Accessions	Q9ESX4	Gene names	Zcchc17, Ps1d
Domain Architecture	No domain graphic available
Description	Nucleolar protein of 40 kDa (pNO40) (Zinc finger CCHC domain- containing protein 17) (Putative S1 RNA-binding domain protein) (PS1D protein).

FXR2_HUMAN
θ value	2.36792 (rank : 10)	NC score	0.047362 (rank : 13)
Query Neighborhood Hits	21	Target Neighborhood Hits	77	Shared Neighborhood Hits	11
SwissProt Accessions	P51116, Q8WUM2	Gene names	FXR2
Domain Architecture
Description	Fragile X mental retardation syndrome-related protein 2.

FXR2_MOUSE
θ value	2.36792 (rank : 11)	NC score	0.045659 (rank : 14)
Query Neighborhood Hits	21	Target Neighborhood Hits	66	Shared Neighborhood Hits	8
SwissProt Accessions	Q9WVR4, Q9WVR5	Gene names	Fxr2, Fxr2h
Domain Architecture
Description	Fragile X mental retardation syndrome-related protein 2.

NOVA1_HUMAN
θ value	2.36792 (rank : 12)	NC score	0.077360 (rank : 10)
Query Neighborhood Hits	21	Target Neighborhood Hits	50	Shared Neighborhood Hits	12
SwissProt Accessions	P51513	Gene names	NOVA1
Domain Architecture
Description	RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) (Onconeural ventral antigen 1) (Paraneoplastic Ri antigen) (Ventral neuron-specific protein 1).

FUBP3_HUMAN
θ value	3.0926 (rank : 13)	NC score	0.042170 (rank : 17)
Query Neighborhood Hits	21	Target Neighborhood Hits	68	Shared Neighborhood Hits	12
SwissProt Accessions	Q96I24, Q92946, Q9BVB6	Gene names	FUBP3
Domain Architecture
Description	Far upstream element-binding protein 3 (FUSE-binding protein 3).

PCBP3_HUMAN
θ value	4.03905 (rank : 14)	NC score	0.044047 (rank : 16)
Query Neighborhood Hits	21	Target Neighborhood Hits	48	Shared Neighborhood Hits	13
SwissProt Accessions	P57721, Q8N9K6, Q96EP6	Gene names	PCBP3
Domain Architecture
Description	Poly(rC)-binding protein 3 (Alpha-CP3).

PCBP3_MOUSE
θ value	4.03905 (rank : 15)	NC score	0.044076 (rank : 15)
Query Neighborhood Hits	21	Target Neighborhood Hits	48	Shared Neighborhood Hits	13
SwissProt Accessions	P57722, Q8BSB0, Q8C544	Gene names	Pcbp3
Domain Architecture
Description	Poly(rC)-binding protein 3 (Alpha-CP3).

HNRPK_HUMAN
θ value	5.27518 (rank : 16)	NC score	0.050350 (rank : 11)
Query Neighborhood Hits	21	Target Neighborhood Hits	45	Shared Neighborhood Hits	11
SwissProt Accessions	P61978, Q07244, Q15671, Q60577, Q922Y7, Q96J62	Gene names	HNRPK, HNRNPK
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein K (hnRNP K) (Transformation up-regulated nuclear protein) (TUNP).

HNRPK_MOUSE
θ value	5.27518 (rank : 17)	NC score	0.050350 (rank : 12)
Query Neighborhood Hits	21	Target Neighborhood Hits	45	Shared Neighborhood Hits	11
SwissProt Accessions	P61979, Q07244, Q15671, Q60577, Q8BGQ8, Q922Y7, Q96J62	Gene names	Hnrpk, Hnrnpk
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein K.

DLGP2_MOUSE
θ value	8.99809 (rank : 18)	NC score	0.022881 (rank : 20)
Query Neighborhood Hits	21	Target Neighborhood Hits	49	Shared Neighborhood Hits	3
SwissProt Accessions	Q8BJ42, Q6XBF3	Gene names	Dlgap2, Dap2
Domain Architecture	No domain graphic available
Description	Disks large-associated protein 2 (DAP-2) (SAP90/PSD-95-associated protein 2) (SAPAP2) (PSD-95/SAP90-binding protein 2).

IPO8_MOUSE
θ value	8.99809 (rank : 19)	NC score	0.009731 (rank : 21)
Query Neighborhood Hits	21	Target Neighborhood Hits	35	Shared Neighborhood Hits	2
SwissProt Accessions	Q7TMY7, Q811I3, Q8C8A9, Q8R2P6, Q8R3V7	Gene names	Ipo8
Domain Architecture
Description	Importin-8 (Imp8) (Ran-binding protein 8) (RanBP8).

SAM68_HUMAN
θ value	8.99809 (rank : 20)	NC score	0.030603 (rank : 18)
Query Neighborhood Hits	21	Target Neighborhood Hits	68	Shared Neighborhood Hits	9
SwissProt Accessions	Q07666, Q6PJX7, Q8NB97, Q99760	Gene names	KHDRBS1, SAM68
Domain Architecture	No domain graphic available
Description	KH domain-containing, RNA-binding, signal transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP- associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68).

SAM68_MOUSE
θ value	8.99809 (rank : 21)	NC score	0.030466 (rank : 19)
Query Neighborhood Hits	21	Target Neighborhood Hits	65	Shared Neighborhood Hits	9
SwissProt Accessions	Q60749, Q3U8T3, Q60735, Q99M33	Gene names	Khdrbs1
Domain Architecture	No domain graphic available
Description	KH domain-containing, RNA-binding, signal transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP- associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68).

Hits sorted by NC score

PNPT1_MOUSE
NC score	0.999962 (rank : 1)	θ value	0 (rank : 2)
Query Neighborhood Hits	21	Target Neighborhood Hits	21	Shared Neighborhood Hits	21
SwissProt Accessions	Q8K1R3, Q3UEP9, Q810U7, Q812B3, Q8R2U3, Q9DC52	Gene names	Pnpt1, Pnpase
Domain Architecture	No domain graphic available
Description	Polyribonucleotide nucleotidyltransferase 1, mitochondrial precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide phosphorylase-like protein) (PNPase old-35) (3'-5' RNA exonuclease OLD35).

PNPT1_HUMAN
NC score	0.998268 (rank : 2)	θ value	0 (rank : 1)
Query Neighborhood Hits	21	Target Neighborhood Hits	30	Shared Neighborhood Hits	20
SwissProt Accessions	Q8TCS8, Q53SU0, Q68CN1, Q7Z7D1, Q8IWX1, Q96T05, Q9BRU3, Q9BVX0	Gene names	PNPT1, PNPASE
Domain Architecture	No domain graphic available
Description	Polyribonucleotide nucleotidyltransferase 1, mitochondrial precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide phosphorylase-like protein) (PNPase old-35) (3'-5' RNA exonuclease OLD35).

EXOS4_MOUSE
NC score	0.252478 (rank : 3)	θ value	0.000461057 (rank : 3)
Query Neighborhood Hits	21	Target Neighborhood Hits	8	Shared Neighborhood Hits	6
SwissProt Accessions	Q921I9	Gene names	Exosc4, Rrp41
Domain Architecture
Description	Exosome complex exonuclease RRP41 (EC 3.1.13.-) (Ribosomal RNA- processing protein 41) (Exosome component 4).

EXOS4_HUMAN
NC score	0.237215 (rank : 4)	θ value	0.00175202 (rank : 4)
Query Neighborhood Hits	21	Target Neighborhood Hits	8	Shared Neighborhood Hits	6
SwissProt Accessions	Q9NPD3	Gene names	EXOSC4, RRP41, SKI6
Domain Architecture
Description	Exosome complex exonuclease RRP41 (EC 3.1.13.-) (Ribosomal RNA- processing protein 41) (Exosome component 4) (p12A).

EXOS8_HUMAN
NC score	0.109575 (rank : 5)	θ value	0.279714 (rank : 6)
Query Neighborhood Hits	21	Target Neighborhood Hits	10	Shared Neighborhood Hits	6
SwissProt Accessions	Q96B26, O43480	Gene names	EXOSC8, OIP2, RRP43
Domain Architecture
Description	Exosome complex exonuclease RRP43 (EC 3.1.13.-) (Ribosomal RNA- processing protein 43) (Exosome component 8) (p9) (Opa-interacting protein 2).

NOVA2_HUMAN
NC score	0.104832 (rank : 6)	θ value	0.125558 (rank : 5)
Query Neighborhood Hits	21	Target Neighborhood Hits	51	Shared Neighborhood Hits	12
SwissProt Accessions	Q9UNW9, O43267, Q9UEA1	Gene names	NOVA2, ANOVA, NOVA3
Domain Architecture
Description	RNA-binding protein Nova-2 (Neuro-oncological ventral antigen 2) (Astrocytic NOVA1-like RNA-binding protein).

EXOS8_MOUSE
NC score	0.102920 (rank : 7)	θ value	0.47712 (rank : 7)
Query Neighborhood Hits	21	Target Neighborhood Hits	10	Shared Neighborhood Hits	6
SwissProt Accessions	Q9D753	Gene names	Exosc8, Rrp43
Domain Architecture	No domain graphic available
Description	Exosome complex exonuclease RRP43 (EC 3.1.13.-) (Ribosomal RNA- processing protein 43) (Exosome component 8).

NO40_HUMAN
NC score	0.096444 (rank : 8)	θ value	1.38821 (rank : 8)
Query Neighborhood Hits	21	Target Neighborhood Hits	47	Shared Neighborhood Hits	4
SwissProt Accessions	Q9NP64, Q6PKH4, Q9NYG4, Q9P0M8	Gene names	ZCCHC17, PS1D
Domain Architecture	No domain graphic available
Description	Nucleolar protein of 40 kDa (pNO40) (Zinc finger CCHC domain- containing protein 17) (Putative S1 RNA-binding domain protein) (PS1D protein) (Pnn-interacting nucleolar protein).

NO40_MOUSE
NC score	0.096102 (rank : 9)	θ value	1.38821 (rank : 9)
Query Neighborhood Hits	21	Target Neighborhood Hits	53	Shared Neighborhood Hits	4
SwissProt Accessions	Q9ESX4	Gene names	Zcchc17, Ps1d
Domain Architecture	No domain graphic available
Description	Nucleolar protein of 40 kDa (pNO40) (Zinc finger CCHC domain- containing protein 17) (Putative S1 RNA-binding domain protein) (PS1D protein).

NOVA1_HUMAN
NC score	0.077360 (rank : 10)	θ value	2.36792 (rank : 12)
Query Neighborhood Hits	21	Target Neighborhood Hits	50	Shared Neighborhood Hits	12
SwissProt Accessions	P51513	Gene names	NOVA1
Domain Architecture
Description	RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) (Onconeural ventral antigen 1) (Paraneoplastic Ri antigen) (Ventral neuron-specific protein 1).

HNRPK_HUMAN
NC score	0.050350 (rank : 11)	θ value	5.27518 (rank : 16)
Query Neighborhood Hits	21	Target Neighborhood Hits	45	Shared Neighborhood Hits	11
SwissProt Accessions	P61978, Q07244, Q15671, Q60577, Q922Y7, Q96J62	Gene names	HNRPK, HNRNPK
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein K (hnRNP K) (Transformation up-regulated nuclear protein) (TUNP).

HNRPK_MOUSE
NC score	0.050350 (rank : 12)	θ value	5.27518 (rank : 17)
Query Neighborhood Hits	21	Target Neighborhood Hits	45	Shared Neighborhood Hits	11
SwissProt Accessions	P61979, Q07244, Q15671, Q60577, Q8BGQ8, Q922Y7, Q96J62	Gene names	Hnrpk, Hnrnpk
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein K.

FXR2_HUMAN
NC score	0.047362 (rank : 13)	θ value	2.36792 (rank : 10)
Query Neighborhood Hits	21	Target Neighborhood Hits	77	Shared Neighborhood Hits	11
SwissProt Accessions	P51116, Q8WUM2	Gene names	FXR2
Domain Architecture
Description	Fragile X mental retardation syndrome-related protein 2.

FXR2_MOUSE
NC score	0.045659 (rank : 14)	θ value	2.36792 (rank : 11)
Query Neighborhood Hits	21	Target Neighborhood Hits	66	Shared Neighborhood Hits	8
SwissProt Accessions	Q9WVR4, Q9WVR5	Gene names	Fxr2, Fxr2h
Domain Architecture
Description	Fragile X mental retardation syndrome-related protein 2.

PCBP3_MOUSE
NC score	0.044076 (rank : 15)	θ value	4.03905 (rank : 15)
Query Neighborhood Hits	21	Target Neighborhood Hits	48	Shared Neighborhood Hits	13
SwissProt Accessions	P57722, Q8BSB0, Q8C544	Gene names	Pcbp3
Domain Architecture
Description	Poly(rC)-binding protein 3 (Alpha-CP3).

PCBP3_HUMAN
NC score	0.044047 (rank : 16)	θ value	4.03905 (rank : 14)
Query Neighborhood Hits	21	Target Neighborhood Hits	48	Shared Neighborhood Hits	13
SwissProt Accessions	P57721, Q8N9K6, Q96EP6	Gene names	PCBP3
Domain Architecture
Description	Poly(rC)-binding protein 3 (Alpha-CP3).

FUBP3_HUMAN
NC score	0.042170 (rank : 17)	θ value	3.0926 (rank : 13)
Query Neighborhood Hits	21	Target Neighborhood Hits	68	Shared Neighborhood Hits	12
SwissProt Accessions	Q96I24, Q92946, Q9BVB6	Gene names	FUBP3
Domain Architecture
Description	Far upstream element-binding protein 3 (FUSE-binding protein 3).

SAM68_HUMAN
NC score	0.030603 (rank : 18)	θ value	8.99809 (rank : 20)
Query Neighborhood Hits	21	Target Neighborhood Hits	68	Shared Neighborhood Hits	9
SwissProt Accessions	Q07666, Q6PJX7, Q8NB97, Q99760	Gene names	KHDRBS1, SAM68
Domain Architecture	No domain graphic available
Description	KH domain-containing, RNA-binding, signal transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP- associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68).

SAM68_MOUSE
NC score	0.030466 (rank : 19)	θ value	8.99809 (rank : 21)
Query Neighborhood Hits	21	Target Neighborhood Hits	65	Shared Neighborhood Hits	9
SwissProt Accessions	Q60749, Q3U8T3, Q60735, Q99M33	Gene names	Khdrbs1
Domain Architecture	No domain graphic available
Description	KH domain-containing, RNA-binding, signal transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP- associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68).

DLGP2_MOUSE
NC score	0.022881 (rank : 20)	θ value	8.99809 (rank : 18)
Query Neighborhood Hits	21	Target Neighborhood Hits	49	Shared Neighborhood Hits	3
SwissProt Accessions	Q8BJ42, Q6XBF3	Gene names	Dlgap2, Dap2
Domain Architecture	No domain graphic available
Description	Disks large-associated protein 2 (DAP-2) (SAP90/PSD-95-associated protein 2) (SAPAP2) (PSD-95/SAP90-binding protein 2).

IPO8_MOUSE
NC score	0.009731 (rank : 21)	θ value	8.99809 (rank : 19)
Query Neighborhood Hits	21	Target Neighborhood Hits	35	Shared Neighborhood Hits	2
SwissProt Accessions	Q7TMY7, Q811I3, Q8C8A9, Q8R2P6, Q8R3V7	Gene names	Ipo8
Domain Architecture
Description	Importin-8 (Imp8) (Ran-binding protein 8) (RanBP8).