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Network neighborhood for query Sequence : FOXD3_MOUSE

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FOXD3_MOUSE
SwissProt Accessions	Q61060	Gene names	Foxd3, Hfh2
Domain Architecture
Description	Forkhead box protein D3 (HNF3/FH transcription factor genesis) (Hepatocyte nuclear factor 3 forkhead homolog 2) (HFH-2).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

FOXD3_MOUSE
θ value	9.85132e-148 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	98	Target Neighborhood Hits	98	Shared Neighborhood Hits	98
SwissProt Accessions	Q61060	Gene names	Foxd3, Hfh2
Domain Architecture
Description	Forkhead box protein D3 (HNF3/FH transcription factor genesis) (Hepatocyte nuclear factor 3 forkhead homolog 2) (HFH-2).

FOXD3_HUMAN
θ value	4.48402e-100 (rank : 2)	NC score	0.998221 (rank : 2)
Query Neighborhood Hits	98	Target Neighborhood Hits	100	Shared Neighborhood Hits	86
SwissProt Accessions	Q9UJU5, Q9BYM2, Q9UDD1	Gene names	FOXD3
Domain Architecture
Description	Forkhead box protein D3 (HNF3/FH transcription factor genesis).

FOXD1_MOUSE
θ value	6.34462e-54 (rank : 3)	NC score	0.994896 (rank : 3)
Query Neighborhood Hits	98	Target Neighborhood Hits	111	Shared Neighborhood Hits	81
SwissProt Accessions	Q61345	Gene names	Foxd1, Fkhl8, Freac4, Hfhbf2
Domain Architecture
Description	Forkhead box protein D1 (Forkhead-related protein FKHL8) (Forkhead- related transcription factor 4) (FREAC-4) (Brain factor 2) (HFH-BF-2).

FOXD1_HUMAN
θ value	1.08223e-53 (rank : 4)	NC score	0.992730 (rank : 5)
Query Neighborhood Hits	98	Target Neighborhood Hits	122	Shared Neighborhood Hits	82
SwissProt Accessions	Q16676, Q12949	Gene names	FOXD1, FKHL8, FREAC4
Domain Architecture
Description	Forkhead box protein D1 (Forkhead-related protein FKHL8) (Forkhead- related transcription factor 4) (FREAC-4).

FOXD2_HUMAN
θ value	9.16162e-53 (rank : 5)	NC score	0.992941 (rank : 4)
Query Neighborhood Hits	98	Target Neighborhood Hits	143	Shared Neighborhood Hits	82
SwissProt Accessions	O60548	Gene names	FOXD2, FKHL17, FREAC9
Domain Architecture
Description	Forkhead box protein D2 (Forkhead-related protein FKHL17) (Forkhead- related transcription factor 9) (FREAC-9).

FOXD2_MOUSE
θ value	9.16162e-53 (rank : 6)	NC score	0.992554 (rank : 6)
Query Neighborhood Hits	98	Target Neighborhood Hits	130	Shared Neighborhood Hits	81
SwissProt Accessions	O35392	Gene names	Foxd2, Mf2
Domain Architecture
Description	Forkhead box protein D2 (Mesoderm/mesenchyme forkhead 2) (MF-2).

FX4L4_HUMAN
θ value	5.93839e-52 (rank : 7)	NC score	0.987455 (rank : 10)
Query Neighborhood Hits	98	Target Neighborhood Hits	101	Shared Neighborhood Hits	82
SwissProt Accessions	Q8WXT5	Gene names	FOXD4L4, FOXD4B
Domain Architecture
Description	Forkhead box protein D4-like 4 (Forkhead box protein D4B) (Myeloid factor-gamma).

FOXD4_MOUSE
θ value	5.02714e-51 (rank : 8)	NC score	0.988837 (rank : 7)
Query Neighborhood Hits	98	Target Neighborhood Hits	98	Shared Neighborhood Hits	81
SwissProt Accessions	Q60688, Q61573	Gene names	Foxd4, Fkh2, Fkhl9, Freac5
Domain Architecture
Description	Forkhead box protein D4 (Forkhead-related protein FKHL9) (Forkhead- related transcription factor 5) (FREAC-5) (Transcription factor FKH- 2).

FX4L1_HUMAN
θ value	6.56568e-51 (rank : 9)	NC score	0.987211 (rank : 11)
Query Neighborhood Hits	98	Target Neighborhood Hits	111	Shared Neighborhood Hits	83
SwissProt Accessions	Q9NU39	Gene names	FOXD4L1
Domain Architecture
Description	Forkhead box protein D4-like 1.

FOXD4_HUMAN
θ value	1.11993e-50 (rank : 10)	NC score	0.985622 (rank : 13)
Query Neighborhood Hits	98	Target Neighborhood Hits	106	Shared Neighborhood Hits	83
SwissProt Accessions	Q12950, Q5VVK1, Q8WXT6	Gene names	FOXD4, FKHL9, FOXD4A, FREAC5
Domain Architecture
Description	Forkhead box protein D4 (Forkhead-related protein FKHL9) (Forkhead- related transcription factor 5) (FREAC-5) (Myeloid factor-alpha).

FOXC2_HUMAN
θ value	5.03882e-43 (rank : 11)	NC score	0.968449 (rank : 39)
Query Neighborhood Hits	98	Target Neighborhood Hits	236	Shared Neighborhood Hits	81
SwissProt Accessions	Q99958	Gene names	FOXC2, FKHL14, MFH1
Domain Architecture
Description	Forkhead box protein C2 (Forkhead-related protein FKHL14) (Mesenchyme fork head protein 1) (MFH-1 protein) (Transcription factor FKH-14).

FOXE3_HUMAN
θ value	1.62093e-41 (rank : 12)	NC score	0.988691 (rank : 8)
Query Neighborhood Hits	98	Target Neighborhood Hits	112	Shared Neighborhood Hits	81
SwissProt Accessions	Q13461, Q5SVY9, Q9NQV9	Gene names	FOXE3, FKHL12, FREAC8
Domain Architecture
Description	Forkhead box protein E3 (Forkhead-related protein FKHL12) (Forkhead- related transcription factor 8) (FREAC-8).

FOXC2_MOUSE
θ value	6.15952e-41 (rank : 13)	NC score	0.974688 (rank : 27)
Query Neighborhood Hits	98	Target Neighborhood Hits	124	Shared Neighborhood Hits	81
SwissProt Accessions	Q61850, P97948, Q63869, Q8C694	Gene names	Foxc2, Fkh14, Fkhl14, Mfh1
Domain Architecture
Description	Forkhead box protein C2 (Forkhead-related protein FKHL14) (Mesenchyme fork head protein 1) (MFH-1 protein) (Transcription factor FKH-14).

FOXE3_MOUSE
θ value	5.21438e-40 (rank : 14)	NC score	0.987885 (rank : 9)
Query Neighborhood Hits	98	Target Neighborhood Hits	118	Shared Neighborhood Hits	81
SwissProt Accessions	Q9QY14	Gene names	Foxe3
Domain Architecture
Description	Forkhead box protein E3.

FOXE1_HUMAN
θ value	8.89434e-40 (rank : 15)	NC score	0.984074 (rank : 14)
Query Neighborhood Hits	98	Target Neighborhood Hits	106	Shared Neighborhood Hits	81
SwissProt Accessions	O00358, O75765	Gene names	FOXE1, FKHL15, TITF2, TTF2
Domain Architecture
Description	Forkhead box protein E1 (Thyroid transcription factor 2) (TTF-2) (Forkhead-related protein FKHL15).

FOXE1_MOUSE
θ value	8.89434e-40 (rank : 16)	NC score	0.986722 (rank : 12)
Query Neighborhood Hits	98	Target Neighborhood Hits	91	Shared Neighborhood Hits	81
SwissProt Accessions	Q8R2I0	Gene names	Foxe1, Titf2
Domain Architecture
Description	Forkhead box protein E1 (Thyroid transcription factor 2) (TTF-2).

FOXC1_HUMAN
θ value	1.16164e-39 (rank : 17)	NC score	0.968513 (rank : 38)
Query Neighborhood Hits	98	Target Neighborhood Hits	208	Shared Neighborhood Hits	81
SwissProt Accessions	Q12948, Q86UP7, Q9BYM1, Q9NUE5, Q9UDD0, Q9UP06	Gene names	FOXC1, FKHL7, FREAC3
Domain Architecture
Description	Forkhead box protein C1 (Forkhead-related protein FKHL7) (Forkhead- related transcription factor 3) (FREAC-3).

FOXC1_MOUSE
θ value	1.16164e-39 (rank : 18)	NC score	0.968679 (rank : 37)
Query Neighborhood Hits	98	Target Neighborhood Hits	218	Shared Neighborhood Hits	81
SwissProt Accessions	Q61572, O88409, Q61582	Gene names	Foxc1, Fkh1, Fkhl7, Freac3, Mf1
Domain Architecture
Description	Forkhead box protein C1 (Forkhead-related protein FKHL7) (Forkhead- related transcription factor 3) (FREAC-3) (Transcription factor FKH-1) (Mesoderm/mesenchyme forkhead 1) (MF-1).

FOXB1_HUMAN
θ value	6.37413e-38 (rank : 19)	NC score	0.978197 (rank : 19)
Query Neighborhood Hits	98	Target Neighborhood Hits	121	Shared Neighborhood Hits	81
SwissProt Accessions	Q99853, O60652, O75917	Gene names	FOXB1, FKH5
Domain Architecture
Description	Forkhead box protein B1 (Transcription factor FKH-5).

FOXB1_MOUSE
θ value	1.20211e-36 (rank : 20)	NC score	0.977345 (rank : 21)
Query Neighborhood Hits	98	Target Neighborhood Hits	125	Shared Neighborhood Hits	81
SwissProt Accessions	Q64732, O08753	Gene names	Foxb1, Fkh5, Foxb1a, Foxb1b, Mf3
Domain Architecture
Description	Forkhead box protein B1 (Transcription factor FKH-5).

FREA_HUMAN
θ value	1.20211e-36 (rank : 21)	NC score	0.973827 (rank : 29)
Query Neighborhood Hits	98	Target Neighborhood Hits	205	Shared Neighborhood Hits	81
SwissProt Accessions	O43638, Q96D28	Gene names	FKHL18, FREAC10
Domain Architecture	No domain graphic available
Description	Forkhead-related transcription factor 10 (FREAC-10) (Forkhead-like 18 protein).

FOXB2_MOUSE
θ value	1.32909e-35 (rank : 22)	NC score	0.980089 (rank : 17)
Query Neighborhood Hits	98	Target Neighborhood Hits	139	Shared Neighborhood Hits	82
SwissProt Accessions	Q64733	Gene names	Foxb2, Fkh4
Domain Architecture
Description	Forkhead box protein B2 (Transcription factor FKH-4).

FREA_MOUSE
θ value	2.96089e-35 (rank : 23)	NC score	0.975897 (rank : 25)
Query Neighborhood Hits	98	Target Neighborhood Hits	147	Shared Neighborhood Hits	82
SwissProt Accessions	Q61574, Q8C5N7	Gene names	Fkhl18, Fkh3, Freac10
Domain Architecture	No domain graphic available
Description	Forkhead-related transcription factor 10 (FREAC-10) (Forkhead-like 18 protein) (Transcription factor FKH-3).

FOXL1_HUMAN
θ value	6.59618e-35 (rank : 24)	NC score	0.983758 (rank : 15)
Query Neighborhood Hits	98	Target Neighborhood Hits	114	Shared Neighborhood Hits	81
SwissProt Accessions	Q12952, Q9H242	Gene names	FOXL1, FKHL11, FREAC7
Domain Architecture
Description	Forkhead box protein L1 (Forkhead-related protein FKHL11) (Forkhead- related transcription factor 7) (FREAC-7).

HNF3B_HUMAN
θ value	6.59618e-35 (rank : 25)	NC score	0.972585 (rank : 34)
Query Neighborhood Hits	98	Target Neighborhood Hits	106	Shared Neighborhood Hits	81
SwissProt Accessions	Q9Y261, Q8WUW4, Q96DF7	Gene names	FOXA2, HNF3B, TCF3B
Domain Architecture
Description	Hepatocyte nuclear factor 3-beta (HNF-3B) (Forkhead box protein A2).

HNF3B_MOUSE
θ value	6.59618e-35 (rank : 26)	NC score	0.972892 (rank : 33)
Query Neighborhood Hits	98	Target Neighborhood Hits	112	Shared Neighborhood Hits	81
SwissProt Accessions	P35583, Q60602	Gene names	Foxa2, Hnf3b, Tcf-3b, Tcf3b
Domain Architecture
Description	Hepatocyte nuclear factor 3-beta (HNF-3B) (Forkhead box protein A2).

FOXL1_MOUSE
θ value	1.9192e-34 (rank : 27)	NC score	0.978190 (rank : 20)
Query Neighborhood Hits	98	Target Neighborhood Hits	152	Shared Neighborhood Hits	81
SwissProt Accessions	Q64731	Gene names	Foxl1, Fkh6, Fkhl11
Domain Architecture
Description	Forkhead box protein L1 (Forkhead-related protein FKHL11) (Transcription factor FKH-6).

HNF3A_MOUSE
θ value	2.50655e-34 (rank : 28)	NC score	0.965898 (rank : 41)
Query Neighborhood Hits	98	Target Neighborhood Hits	140	Shared Neighborhood Hits	83
SwissProt Accessions	P35582, Q61108	Gene names	Foxa1, Hnf3a, Tcf-3a, Tcf3a
Domain Architecture
Description	Hepatocyte nuclear factor 3-alpha (HNF-3A) (Forkhead box protein A1).

HNF3A_HUMAN
θ value	7.29293e-34 (rank : 29)	NC score	0.968030 (rank : 40)
Query Neighborhood Hits	98	Target Neighborhood Hits	119	Shared Neighborhood Hits	83
SwissProt Accessions	P55317, Q9H2A0	Gene names	FOXA1, HNF3A, TCF3A
Domain Architecture
Description	Hepatocyte nuclear factor 3-alpha (HNF-3A) (Forkhead box protein A1).

FOXI1_HUMAN
θ value	9.52487e-34 (rank : 30)	NC score	0.973398 (rank : 30)
Query Neighborhood Hits	98	Target Neighborhood Hits	104	Shared Neighborhood Hits	81
SwissProt Accessions	Q12951, Q14518, Q66SR7, Q8N6L8	Gene names	FOXI1, FKHL10, FREAC6
Domain Architecture
Description	Forkhead box protein I1 (Forkhead-related protein FKHL10) (Forkhead- related transcription factor 6) (FREAC-6) (Hepatocyte nuclear factor 3 forkhead homolog 3) (HNF-3/fork-head homolog 3) (HFH-3).

HNF3G_MOUSE
θ value	1.24399e-33 (rank : 31)	NC score	0.976148 (rank : 24)
Query Neighborhood Hits	98	Target Neighborhood Hits	103	Shared Neighborhood Hits	81
SwissProt Accessions	P35584	Gene names	Foxa3, Hnf3g, Tcf-3g, Tcf3g
Domain Architecture
Description	Hepatocyte nuclear factor 3-gamma (HNF-3G) (Forkhead box protein A3).

HNF3G_HUMAN
θ value	1.6247e-33 (rank : 32)	NC score	0.976508 (rank : 23)
Query Neighborhood Hits	98	Target Neighborhood Hits	122	Shared Neighborhood Hits	81
SwissProt Accessions	P55318, Q9UMW9	Gene names	FOXA3, HNF3G, TCF3G
Domain Architecture
Description	Hepatocyte nuclear factor 3-gamma (HNF-3G) (Forkhead box protein A3) (Fork head-related protein FKH H3).

FOXL2_HUMAN
θ value	2.12192e-33 (rank : 33)	NC score	0.977066 (rank : 22)
Query Neighborhood Hits	98	Target Neighborhood Hits	142	Shared Neighborhood Hits	81
SwissProt Accessions	P58012, Q4ZGJ3	Gene names	FOXL2
Domain Architecture
Description	Forkhead box protein L2.

FOXL2_MOUSE
θ value	2.12192e-33 (rank : 34)	NC score	0.975355 (rank : 26)
Query Neighborhood Hits	98	Target Neighborhood Hits	151	Shared Neighborhood Hits	81
SwissProt Accessions	O88470, Q8K3X9	Gene names	Foxl2, Pfrk
Domain Architecture	No domain graphic available
Description	Forkhead box protein L2 (Pituitary forkhead factor) (P-Frk).

FOXF1_HUMAN
θ value	2.77131e-33 (rank : 35)	NC score	0.971357 (rank : 36)
Query Neighborhood Hits	98	Target Neighborhood Hits	106	Shared Neighborhood Hits	81
SwissProt Accessions	Q12946, Q5FWE5	Gene names	FOXF1, FKHL5, FREAC1
Domain Architecture
Description	Forkhead box protein F1 (Forkhead-related protein FKHL5) (Forkhead- related transcription factor 1) (FREAC-1) (Forkhead-related activator 1).

FOXI1_MOUSE
θ value	2.77131e-33 (rank : 36)	NC score	0.971868 (rank : 35)
Query Neighborhood Hits	98	Target Neighborhood Hits	118	Shared Neighborhood Hits	81
SwissProt Accessions	Q922I5, Q5SRI5, Q9D299	Gene names	Foxi1
Domain Architecture	No domain graphic available
Description	Forkhead box protein I1.

FOXI2_MOUSE
θ value	2.77131e-33 (rank : 37)	NC score	0.981955 (rank : 16)
Query Neighborhood Hits	98	Target Neighborhood Hits	89	Shared Neighborhood Hits	81
SwissProt Accessions	Q3I5G5, Q8BIK9	Gene names	Foxi2
Domain Architecture	No domain graphic available
Description	Forkhead box protein I2.

FOXF1_MOUSE
θ value	6.17384e-33 (rank : 38)	NC score	0.972977 (rank : 32)
Query Neighborhood Hits	98	Target Neighborhood Hits	86	Shared Neighborhood Hits	81
SwissProt Accessions	Q61080, Q61661	Gene names	Foxf1, Fkhl5, Foxf1a, Freac1, Hfh8
Domain Architecture
Description	Forkhead box protein F1 (Forkhead-related protein FKHL5) (Forkhead- related transcription factor 1) (FREAC-1) (Hepatocyte nuclear factor 3 forkhead homolog 8) (HFH-8).

FOXF2_HUMAN
θ value	6.17384e-33 (rank : 39)	NC score	0.978415 (rank : 18)
Query Neighborhood Hits	98	Target Neighborhood Hits	115	Shared Neighborhood Hits	81
SwissProt Accessions	Q12947, Q9UQ85	Gene names	FOXF2, FKHL6, FREAC2
Domain Architecture
Description	Forkhead box protein F2 (Forkhead-related protein FKHL6) (Forkhead- related transcription factor 2) (FREAC-2) (Forkhead-related activator 2).

FOXGB_MOUSE
θ value	5.22648e-32 (rank : 40)	NC score	0.965016 (rank : 43)
Query Neighborhood Hits	98	Target Neighborhood Hits	148	Shared Neighborhood Hits	82
SwissProt Accessions	Q60987, Q80VP3	Gene names	Foxg1b, Fkhl1, Foxg1, Hfhbf1
Domain Architecture
Description	Forkhead box protein G1B (Forkhead-related protein FKHL1) (Transcription factor BF-1) (Brain factor 1) (BF1).

FOXGB_HUMAN
θ value	6.82597e-32 (rank : 41)	NC score	0.964389 (rank : 44)
Query Neighborhood Hits	98	Target Neighborhood Hits	123	Shared Neighborhood Hits	83
SwissProt Accessions	P55315	Gene names	FOXG1B, FKHL1
Domain Architecture
Description	Forkhead box protein G1B (Forkhead-related protein FKHL1) (Transcription factor BF-1) (Brain factor 1) (BF1) (HFK1).

FOXGA_HUMAN
θ value	5.77852e-31 (rank : 42)	NC score	0.965568 (rank : 42)
Query Neighborhood Hits	98	Target Neighborhood Hits	132	Shared Neighborhood Hits	81
SwissProt Accessions	P55316	Gene names	FOXG1A, FKHL2
Domain Architecture
Description	Forkhead box protein G1A (Forkhead-related protein FKHL2) (Transcription factor BF-2) (Brain factor 2) (BF2) (HFK2).

FOXE2_HUMAN
θ value	2.68423e-28 (rank : 43)	NC score	0.954750 (rank : 46)
Query Neighborhood Hits	98	Target Neighborhood Hits	236	Shared Neighborhood Hits	85
SwissProt Accessions	Q99526	Gene names	FOXE2
Domain Architecture
Description	Forkhead box protein E2 (HNF-3/fork head-like protein 5) (HFKL5) (HFKH4).

FOXQ1_HUMAN
θ value	5.97985e-28 (rank : 44)	NC score	0.974168 (rank : 28)
Query Neighborhood Hits	98	Target Neighborhood Hits	115	Shared Neighborhood Hits	82
SwissProt Accessions	Q9C009, Q9NS06	Gene names	FOXQ1, HFH1
Domain Architecture
Description	Forkhead box protein Q1 (Hepatocyte nuclear factor 3 forkhead homolog 1) (HNF-3/forkhead-like protein 1) (HFH-1).

FOXQ1_MOUSE
θ value	5.97985e-28 (rank : 45)	NC score	0.973053 (rank : 31)
Query Neighborhood Hits	98	Target Neighborhood Hits	96	Shared Neighborhood Hits	82
SwissProt Accessions	O70220	Gene names	Foxq1, Hfh1, Hfh1l
Domain Architecture
Description	Forkhead box protein Q1 (Hepatocyte nuclear factor 3 forkhead homolog 1) (HNF-3/forkhead-like protein 1) (HFH-1) (HFH-1l).

FOXJ1_HUMAN
θ value	7.30988e-26 (rank : 46)	NC score	0.956911 (rank : 45)
Query Neighborhood Hits	98	Target Neighborhood Hits	99	Shared Neighborhood Hits	81
SwissProt Accessions	Q92949, O00630	Gene names	FOXJ1, FKHL13, HFH4
Domain Architecture
Description	Forkhead box protein J1 (Forkhead-related protein FKHL13) (Hepatocyte nuclear factor 3 forkhead homolog 4) (HFH-4).

FOXJ1_MOUSE
θ value	7.30988e-26 (rank : 47)	NC score	0.948577 (rank : 47)
Query Neighborhood Hits	98	Target Neighborhood Hits	209	Shared Neighborhood Hits	86
SwissProt Accessions	Q61660	Gene names	Foxj1, Fkhl13, Hfh4
Domain Architecture
Description	Forkhead box protein J1 (Forkhead-related protein FKHL13) (Hepatocyte nuclear factor 3 forkhead homolog 4) (HFH-4).

FOXK2_HUMAN
θ value	8.08199e-25 (rank : 48)	NC score	0.948145 (rank : 48)
Query Neighborhood Hits	98	Target Neighborhood Hits	190	Shared Neighborhood Hits	82
SwissProt Accessions	Q01167, Q13622, Q13623, Q13624	Gene names	FOXK2, ILF, ILF1
Domain Architecture
Description	Forkhead box protein K2 (Interleukin enhancer-binding factor 1) (Cellular transcription factor ILF-1).

FOXJ3_HUMAN
θ value	1.05554e-24 (rank : 49)	NC score	0.934761 (rank : 51)
Query Neighborhood Hits	98	Target Neighborhood Hits	177	Shared Neighborhood Hits	81
SwissProt Accessions	Q9UPW0, Q9NSS7	Gene names	FOXJ3, KIAA1041
Domain Architecture
Description	Forkhead box protein J3.

FOXJ3_MOUSE
θ value	1.05554e-24 (rank : 50)	NC score	0.934803 (rank : 50)
Query Neighborhood Hits	98	Target Neighborhood Hits	190	Shared Neighborhood Hits	81
SwissProt Accessions	Q8BUR3, Q3UTD8	Gene names	Foxj3, Kiaa1041
Domain Architecture
Description	Forkhead box protein J3.

FOXK1_MOUSE
θ value	2.59989e-23 (rank : 51)	NC score	0.942848 (rank : 49)
Query Neighborhood Hits	98	Target Neighborhood Hits	215	Shared Neighborhood Hits	81
SwissProt Accessions	P42128, O35939	Gene names	Foxk1, Mnf
Domain Architecture
Description	Forkhead box protein K1 (Myocyte nuclear factor) (MNF).

FOXJ2_HUMAN
θ value	1.42661e-21 (rank : 52)	NC score	0.924409 (rank : 56)
Query Neighborhood Hits	98	Target Neighborhood Hits	239	Shared Neighborhood Hits	81
SwissProt Accessions	Q9P0K8, Q96PS9, Q9NSN5	Gene names	FOXJ2, FHX
Domain Architecture
Description	Forkhead box protein J2 (Fork head homologous X).

FOXJ2_MOUSE
θ value	1.42661e-21 (rank : 53)	NC score	0.930881 (rank : 53)
Query Neighborhood Hits	98	Target Neighborhood Hits	151	Shared Neighborhood Hits	81
SwissProt Accessions	Q9ES18	Gene names	Foxj2, Fhx
Domain Architecture
Description	Forkhead box protein J2 (Fork head homologous X).

FOXH1_HUMAN
θ value	2.5182e-18 (rank : 54)	NC score	0.926227 (rank : 55)
Query Neighborhood Hits	98	Target Neighborhood Hits	258	Shared Neighborhood Hits	86
SwissProt Accessions	O75593	Gene names	FOXH1, FAST1, FAST2
Domain Architecture
Description	Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (hFAST-1) (Forkhead activin signal transducer 2) (Fast-2).

FOXH1_MOUSE
θ value	8.10077e-17 (rank : 55)	NC score	0.931151 (rank : 52)
Query Neighborhood Hits	98	Target Neighborhood Hits	118	Shared Neighborhood Hits	81
SwissProt Accessions	O88621, Q9QZL5, Q9R241	Gene names	Foxh1, Fast1, Fast2
Domain Architecture
Description	Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (Forkhead activin signal transducer 2) (Fast-2).

FOXN2_HUMAN
θ value	1.80466e-16 (rank : 56)	NC score	0.927766 (rank : 54)
Query Neighborhood Hits	98	Target Neighborhood Hits	85	Shared Neighborhood Hits	81
SwissProt Accessions	P32314, Q15769	Gene names	FOXN2, HTLF
Domain Architecture
Description	Forkhead box protein N2 (Human T-cell leukemia virus enhancer factor).

FOXN3_HUMAN
θ value	1.80466e-16 (rank : 57)	NC score	0.909222 (rank : 58)
Query Neighborhood Hits	98	Target Neighborhood Hits	121	Shared Neighborhood Hits	81
SwissProt Accessions	O00409, Q96II7, Q9UIE7	Gene names	CHES1, FOXN3
Domain Architecture
Description	Checkpoint suppressor 1 (Forkhead box protein N3).

FOXN3_MOUSE
θ value	3.07829e-16 (rank : 58)	NC score	0.911060 (rank : 57)
Query Neighborhood Hits	98	Target Neighborhood Hits	114	Shared Neighborhood Hits	81
SwissProt Accessions	Q499D0, Q8C5N8, Q9CU83	Gene names	Ches1, Foxn3
Domain Architecture	No domain graphic available
Description	Checkpoint suppressor 1 (Forkhead box protein N3).

FOXP1_HUMAN
θ value	1.52774e-15 (rank : 59)	NC score	0.828269 (rank : 72)
Query Neighborhood Hits	98	Target Neighborhood Hits	168	Shared Neighborhood Hits	81
SwissProt Accessions	Q9H334, Q9H332, Q9H333, Q9P0R1	Gene names	FOXP1
Domain Architecture
Description	Forkhead box protein P1.

FOXP1_MOUSE
θ value	1.52774e-15 (rank : 60)	NC score	0.819344 (rank : 76)
Query Neighborhood Hits	98	Target Neighborhood Hits	241	Shared Neighborhood Hits	81
SwissProt Accessions	P58462	Gene names	Foxp1
Domain Architecture
Description	Forkhead box protein P1 (Forkhead-related transcription factor 1).

FOXP4_HUMAN
θ value	7.58209e-15 (rank : 61)	NC score	0.820554 (rank : 74)
Query Neighborhood Hits	98	Target Neighborhood Hits	246	Shared Neighborhood Hits	82
SwissProt Accessions	Q8IVH2, Q96E19	Gene names	FOXP4, FKHLA
Domain Architecture
Description	Forkhead box protein P4 (Fork head-related protein-like A).

FOXM1_MOUSE
θ value	9.90251e-15 (rank : 62)	NC score	0.882546 (rank : 59)
Query Neighborhood Hits	98	Target Neighborhood Hits	134	Shared Neighborhood Hits	81
SwissProt Accessions	O08696	Gene names	Foxm1, Fkh16
Domain Architecture
Description	Forkhead box protein M1 (Forkhead homolog 16) (Winged-helix transcription factor Trident).

FOXP4_MOUSE
θ value	1.68911e-14 (rank : 63)	NC score	0.824379 (rank : 73)
Query Neighborhood Hits	98	Target Neighborhood Hits	211	Shared Neighborhood Hits	82
SwissProt Accessions	Q9DBY0, Q80V92, Q8CG10, Q8CIS1	Gene names	Foxp4
Domain Architecture	No domain graphic available
Description	Forkhead box protein P4 (Fork head-related protein like A) (mFKHLA).

FOXM1_HUMAN
θ value	2.20605e-14 (rank : 64)	NC score	0.872935 (rank : 60)
Query Neighborhood Hits	98	Target Neighborhood Hits	167	Shared Neighborhood Hits	81
SwissProt Accessions	Q08050, O43258, O43259, O43260, Q4ZGG7, Q9BRL2	Gene names	FOXM1, FKHL16, HFH11, MPP2, WIN
Domain Architecture
Description	Forkhead box protein M1 (Forkhead-related protein FKHL16) (Hepatocyte nuclear factor 3 forkhead homolog 11) (HNF-3/fork-head homolog 11) (HFH-11) (Winged helix factor from INS-1 cells) (M-phase phosphoprotein 2) (MPM-2 reactive phosphoprotein 2) (Transcription factor Trident).

FOXP2_HUMAN
θ value	1.42992e-13 (rank : 65)	NC score	0.780669 (rank : 79)
Query Neighborhood Hits	98	Target Neighborhood Hits	366	Shared Neighborhood Hits	82
SwissProt Accessions	O15409, Q6ZND1, Q75MJ3, Q8IZE0, Q8N0W2, Q8N6B7, Q8N6B8, Q8NFQ1, Q8NFQ2, Q8NFQ3, Q8NFQ4, Q8TD74	Gene names	FOXP2, CAGH44, TNRC10
Domain Architecture
Description	Forkhead box protein P2 (CAG repeat protein 44) (Trinucleotide repeat- containing gene 10 protein).

FOXP2_MOUSE
θ value	1.42992e-13 (rank : 66)	NC score	0.778127 (rank : 80)
Query Neighborhood Hits	98	Target Neighborhood Hits	366	Shared Neighborhood Hits	81
SwissProt Accessions	P58463, Q6PD37, Q8C4F0, Q8R441	Gene names	Foxp2
Domain Architecture
Description	Forkhead box protein P2.

FOXN1_HUMAN
θ value	3.18553e-13 (rank : 67)	NC score	0.837064 (rank : 70)
Query Neighborhood Hits	98	Target Neighborhood Hits	377	Shared Neighborhood Hits	86
SwissProt Accessions	O15353, O15352	Gene names	FOXN1, WHN
Domain Architecture
Description	Forkhead box protein N1 (Transcription factor winged-helix nude).

FOXN1_MOUSE
θ value	3.18553e-13 (rank : 68)	NC score	0.845886 (rank : 66)
Query Neighborhood Hits	98	Target Neighborhood Hits	300	Shared Neighborhood Hits	84
SwissProt Accessions	Q61575	Gene names	Foxn1, Fkh19, Hfh11, Whn
Domain Architecture
Description	Forkhead box protein N1 (Transcription factor winged-helix nude) (Hepatocyte nuclear factor 3 forkhead homolog 11) (HNF-3/forkhead homolog 11) (HFH-11).

FOXP3_MOUSE
θ value	5.43371e-13 (rank : 69)	NC score	0.855903 (rank : 63)
Query Neighborhood Hits	98	Target Neighborhood Hits	117	Shared Neighborhood Hits	81
SwissProt Accessions	Q99JB6	Gene names	Foxp3
Domain Architecture
Description	Forkhead box protein P3 (Scurfin).

FOXO4_HUMAN
θ value	7.09661e-13 (rank : 70)	NC score	0.846779 (rank : 65)
Query Neighborhood Hits	98	Target Neighborhood Hits	197	Shared Neighborhood Hits	81
SwissProt Accessions	P98177, O43821, Q13720, Q3KPF1, Q8TDK9	Gene names	MLLT7, AFX, AFX1, FOXO4
Domain Architecture
Description	Fork head domain transcription factor AFX1 (Forkhead box protein O4).

FOXP3_HUMAN
θ value	7.09661e-13 (rank : 71)	NC score	0.857784 (rank : 62)
Query Neighborhood Hits	98	Target Neighborhood Hits	105	Shared Neighborhood Hits	82
SwissProt Accessions	Q9BZS1, O60827, Q4ZH51	Gene names	FOXP3, IPEX
Domain Architecture
Description	Forkhead box protein P3 (Scurfin).

FOXO4_MOUSE
θ value	1.2105e-12 (rank : 72)	NC score	0.842242 (rank : 67)
Query Neighborhood Hits	98	Target Neighborhood Hits	168	Shared Neighborhood Hits	81
SwissProt Accessions	Q9WVH3	Gene names	Mllt7, Afx, Afx1, Fkhr3, Foxo4
Domain Architecture
Description	Fork head domain transcription factor AFX1 (Afxh) (Forkhead box protein O4).

FOXN4_MOUSE
θ value	2.0648e-12 (rank : 73)	NC score	0.865181 (rank : 61)
Query Neighborhood Hits	98	Target Neighborhood Hits	154	Shared Neighborhood Hits	82
SwissProt Accessions	Q8K3Q3, Q920C0	Gene names	Foxn4
Domain Architecture
Description	Forkhead box protein N4.

FOXN4_HUMAN
θ value	2.69671e-12 (rank : 74)	NC score	0.854935 (rank : 64)
Query Neighborhood Hits	98	Target Neighborhood Hits	248	Shared Neighborhood Hits	81
SwissProt Accessions	Q96NZ1, Q6ZMR4, Q96NZ0	Gene names	FOXN4
Domain Architecture	No domain graphic available
Description	Forkhead box protein N4.

FOXO1_HUMAN
θ value	2.98157e-11 (rank : 75)	NC score	0.819240 (rank : 77)
Query Neighborhood Hits	98	Target Neighborhood Hits	126	Shared Neighborhood Hits	81
SwissProt Accessions	Q12778, O43523, Q5VYC7, Q6NSK6	Gene names	FOXO1A, FKHR
Domain Architecture
Description	Forkhead box protein O1A (Forkhead in rhabdomyosarcoma).

FOXO1_MOUSE
θ value	5.08577e-11 (rank : 76)	NC score	0.819603 (rank : 75)
Query Neighborhood Hits	98	Target Neighborhood Hits	118	Shared Neighborhood Hits	81
SwissProt Accessions	Q9R1E0	Gene names	Foxo1a, Fkhr, Foxo1
Domain Architecture
Description	Forkhead box protein O1A (Forkhead in rhabdomyosarcoma).

FOXO3_HUMAN
θ value	6.64225e-11 (rank : 77)	NC score	0.836535 (rank : 71)
Query Neighborhood Hits	98	Target Neighborhood Hits	105	Shared Neighborhood Hits	81
SwissProt Accessions	O43524, O15171, Q5T2I7, Q9BZ04	Gene names	FOXO3A, FKHRL1
Domain Architecture
Description	Forkhead box protein O3A (Forkhead in rhabdomyosarcoma-like 1) (AF6q21 protein).

FOXR2_MOUSE
θ value	1.9326e-10 (rank : 78)	NC score	0.840479 (rank : 68)
Query Neighborhood Hits	98	Target Neighborhood Hits	88	Shared Neighborhood Hits	81
SwissProt Accessions	Q3UM89	Gene names	Foxr2, Foxn6
Domain Architecture	No domain graphic available
Description	Forkhead box protein R2 (Forkhead box protein N6).

FOXR1_MOUSE
θ value	1.06045e-08 (rank : 79)	NC score	0.839787 (rank : 69)
Query Neighborhood Hits	98	Target Neighborhood Hits	84	Shared Neighborhood Hits	81
SwissProt Accessions	Q3UTB7	Gene names	Foxr1, Foxn5
Domain Architecture	No domain graphic available
Description	Forkhead box protein R1 (Forkhead box protein N5).

FOXR1_HUMAN
θ value	7.59969e-07 (rank : 80)	NC score	0.808158 (rank : 78)
Query Neighborhood Hits	98	Target Neighborhood Hits	85	Shared Neighborhood Hits	81
SwissProt Accessions	Q6PIV2, Q86UT9, Q8IXX2	Gene names	FOXR1, DLNB13, FOXN5
Domain Architecture	No domain graphic available
Description	Forkhead box protein R1 (Forkhead box protein N5).

FOXR2_HUMAN
θ value	0.000461057 (rank : 81)	NC score	0.700498 (rank : 81)
Query Neighborhood Hits	98	Target Neighborhood Hits	97	Shared Neighborhood Hits	81
SwissProt Accessions	Q6PJQ5	Gene names	FOXR2, FOXN6
Domain Architecture	No domain graphic available
Description	Forkhead box protein R2 (Forkhead box protein N6).

CO9A1_MOUSE
θ value	0.813845 (rank : 82)	NC score	0.015801 (rank : 82)
Query Neighborhood Hits	98	Target Neighborhood Hits	477	Shared Neighborhood Hits	15
SwissProt Accessions	Q05722, Q61269, Q61270, Q61433, Q61940	Gene names	Col9a1
Domain Architecture
Description	Collagen alpha-1(IX) chain precursor.

CO9A2_HUMAN
θ value	1.06291 (rank : 83)	NC score	0.011188 (rank : 85)
Query Neighborhood Hits	98	Target Neighborhood Hits	261	Shared Neighborhood Hits	11
SwissProt Accessions	Q14055	Gene names	COL9A2
Domain Architecture	No domain graphic available
Description	Collagen alpha-2(IX) chain precursor.

SYNE1_HUMAN
θ value	1.81305 (rank : 84)	NC score	-0.002500 (rank : 97)
Query Neighborhood Hits	98	Target Neighborhood Hits	1484	Shared Neighborhood Hits	6
SwissProt Accessions	Q8NF91, O94890, Q5JV19, Q5JV22, Q8N9P7, Q8TCP1, Q8WWW6, Q8WWW7, Q8WXF6, Q96N17, Q9C0A7, Q9H525, Q9H526, Q9NS36, Q9NU50, Q9UJ06, Q9UJ07, Q9ULF8	Gene names	SYNE1, KIAA0796, KIAA1262, KIAA1756, MYNE1
Domain Architecture
Description	Nesprin-1 (Nuclear envelope spectrin repeat protein 1) (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte nuclear envelope protein 1) (Myne-1) (Enaptin).

APOB_HUMAN
θ value	2.36792 (rank : 85)	NC score	0.013470 (rank : 83)
Query Neighborhood Hits	98	Target Neighborhood Hits	202	Shared Neighborhood Hits	4
SwissProt Accessions	P04114, O00502, P78479, P78480, P78481, Q13779, Q13785, Q13786, Q13787, Q13788, Q7Z600, Q9UMN0	Gene names	APOB
Domain Architecture
Description	Apolipoprotein B-100 precursor (Apo B-100) [Contains: Apolipoprotein B-48 (Apo B-48)].

CO9A3_HUMAN
θ value	2.36792 (rank : 86)	NC score	0.010963 (rank : 86)
Query Neighborhood Hits	98	Target Neighborhood Hits	361	Shared Neighborhood Hits	12
SwissProt Accessions	Q14050, Q13681, Q9H4G9, Q9UPE2	Gene names	COL9A3
Domain Architecture	No domain graphic available
Description	Collagen alpha-3(IX) chain precursor.

ULE1B_MOUSE
θ value	3.0926 (rank : 87)	NC score	0.006489 (rank : 94)
Query Neighborhood Hits	98	Target Neighborhood Hits	56	Shared Neighborhood Hits	2
SwissProt Accessions	Q9Z1F9, Q8BVX9	Gene names	Uble1b, Sae2, Uba2
Domain Architecture
Description	Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating enzyme subunit 2) (Anthracycline-associated resistance ARX).

CO5A2_HUMAN
θ value	4.03905 (rank : 88)	NC score	0.011431 (rank : 84)
Query Neighborhood Hits	98	Target Neighborhood Hits	760	Shared Neighborhood Hits	18
SwissProt Accessions	P05997	Gene names	COL5A2
Domain Architecture
Description	Collagen alpha-2(V) chain precursor.

CO9A1_HUMAN
θ value	4.03905 (rank : 89)	NC score	0.007741 (rank : 89)
Query Neighborhood Hits	98	Target Neighborhood Hits	420	Shared Neighborhood Hits	11
SwissProt Accessions	P20849, Q13699, Q13700, Q5TF52, Q6P467, Q96BM8, Q99225, Q9H151, Q9H152, Q9Y6P2, Q9Y6P3	Gene names	COL9A1
Domain Architecture
Description	Collagen alpha-1(IX) chain precursor.

COBA1_HUMAN
θ value	4.03905 (rank : 90)	NC score	0.006707 (rank : 93)
Query Neighborhood Hits	98	Target Neighborhood Hits	491	Shared Neighborhood Hits	12
SwissProt Accessions	P12107, Q14034, Q9UIT4, Q9UIT5, Q9UIT6	Gene names	COL11A1
Domain Architecture
Description	Collagen alpha-1(XI) chain precursor.

ENT1_HUMAN
θ value	4.03905 (rank : 91)	NC score	0.007712 (rank : 90)
Query Neighborhood Hits	98	Target Neighborhood Hits	18	Shared Neighborhood Hits	2
SwissProt Accessions	P61550	Gene names
Domain Architecture	No domain graphic available
Description	HERV-T_19q13.11 provirus ancestral Env polyprotein precursor (Envelope polyprotein) (HERV-T Env protein) [Includes: Surface protein (SU); Transmembrane protein (TM)].

NMDE4_HUMAN
θ value	4.03905 (rank : 92)	NC score	0.009331 (rank : 88)
Query Neighborhood Hits	98	Target Neighborhood Hits	133	Shared Neighborhood Hits	9
SwissProt Accessions	O15399	Gene names	GRIN2D
Domain Architecture
Description	Glutamate [NMDA] receptor subunit epsilon 4 precursor (N-methyl D- aspartate receptor subtype 2D) (NR2D) (NMDAR2D) (EB11).

NMDE4_MOUSE
θ value	4.03905 (rank : 93)	NC score	0.007524 (rank : 92)
Query Neighborhood Hits	98	Target Neighborhood Hits	158	Shared Neighborhood Hits	7
SwissProt Accessions	Q03391	Gene names	Grin2d
Domain Architecture
Description	Glutamate [NMDA] receptor subunit epsilon 4 precursor (N-methyl D- aspartate receptor subtype 2D) (NR2D) (NMDAR2D).

CO7A1_HUMAN
θ value	6.88961 (rank : 94)	NC score	0.005429 (rank : 95)
Query Neighborhood Hits	98	Target Neighborhood Hits	807	Shared Neighborhood Hits	17
SwissProt Accessions	Q02388, Q14054, Q16507	Gene names	COL7A1
Domain Architecture
Description	Collagen alpha-1(VII) chain precursor (Long-chain collagen) (LC collagen).

CO9A2_MOUSE
θ value	6.88961 (rank : 95)	NC score	0.007646 (rank : 91)
Query Neighborhood Hits	98	Target Neighborhood Hits	279	Shared Neighborhood Hits	10
SwissProt Accessions	Q07643	Gene names	Col9a2
Domain Architecture	No domain graphic available
Description	Collagen alpha-2(IX) chain precursor.

CSPG5_MOUSE
θ value	8.99809 (rank : 96)	NC score	0.010230 (rank : 87)
Query Neighborhood Hits	98	Target Neighborhood Hits	211	Shared Neighborhood Hits	6
SwissProt Accessions	Q71M36, Q71M37, Q7TNT8, Q8BPJ5, Q9QY32	Gene names	Cspg5, Caleb, Ngc
Domain Architecture	No domain graphic available
Description	Chondroitin sulfate proteoglycan 5 precursor (Neuroglycan C) (Acidic leucine-rich EGF-like domain-containing brain protein).

MYLK_HUMAN
θ value	8.99809 (rank : 97)	NC score	-0.009246 (rank : 98)
Query Neighborhood Hits	98	Target Neighborhood Hits	1328	Shared Neighborhood Hits	4
SwissProt Accessions	Q15746, O95796, O95797, O95798, O95799, Q14844, Q16794, Q5MY99, Q5MYA0, Q7Z4J0, Q9C0L5, Q9UBG5, Q9UIT9	Gene names	MYLK, MLCK
Domain Architecture
Description	Myosin light chain kinase, smooth muscle (EC 2.7.11.18) (MLCK) (Telokin) (Kinase-related protein) (KRP).

TOPRS_MOUSE
θ value	8.99809 (rank : 98)	NC score	0.003362 (rank : 96)
Query Neighborhood Hits	98	Target Neighborhood Hits	263	Shared Neighborhood Hits	3
SwissProt Accessions	Q80Z37, Q3U5B5, Q3UPZ1, Q3USN3, Q3UZ55, Q8BXP2, Q8CFF5, Q8CGC8, Q920L3	Gene names	Topors
Domain Architecture	No domain graphic available
Description	Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-) (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-binding protein 3) (p53BP3).

Hits sorted by NC score

FOXD3_MOUSE
NC score	0.999962 (rank : 1)	θ value	9.85132e-148 (rank : 1)
Query Neighborhood Hits	98	Target Neighborhood Hits	98	Shared Neighborhood Hits	98
SwissProt Accessions	Q61060	Gene names	Foxd3, Hfh2
Domain Architecture
Description	Forkhead box protein D3 (HNF3/FH transcription factor genesis) (Hepatocyte nuclear factor 3 forkhead homolog 2) (HFH-2).

FOXD3_HUMAN
NC score	0.998221 (rank : 2)	θ value	4.48402e-100 (rank : 2)
Query Neighborhood Hits	98	Target Neighborhood Hits	100	Shared Neighborhood Hits	86
SwissProt Accessions	Q9UJU5, Q9BYM2, Q9UDD1	Gene names	FOXD3
Domain Architecture
Description	Forkhead box protein D3 (HNF3/FH transcription factor genesis).

FOXD1_MOUSE
NC score	0.994896 (rank : 3)	θ value	6.34462e-54 (rank : 3)
Query Neighborhood Hits	98	Target Neighborhood Hits	111	Shared Neighborhood Hits	81
SwissProt Accessions	Q61345	Gene names	Foxd1, Fkhl8, Freac4, Hfhbf2
Domain Architecture
Description	Forkhead box protein D1 (Forkhead-related protein FKHL8) (Forkhead- related transcription factor 4) (FREAC-4) (Brain factor 2) (HFH-BF-2).

FOXD2_HUMAN
NC score	0.992941 (rank : 4)	θ value	9.16162e-53 (rank : 5)
Query Neighborhood Hits	98	Target Neighborhood Hits	143	Shared Neighborhood Hits	82
SwissProt Accessions	O60548	Gene names	FOXD2, FKHL17, FREAC9
Domain Architecture
Description	Forkhead box protein D2 (Forkhead-related protein FKHL17) (Forkhead- related transcription factor 9) (FREAC-9).

FOXD1_HUMAN
NC score	0.992730 (rank : 5)	θ value	1.08223e-53 (rank : 4)
Query Neighborhood Hits	98	Target Neighborhood Hits	122	Shared Neighborhood Hits	82
SwissProt Accessions	Q16676, Q12949	Gene names	FOXD1, FKHL8, FREAC4
Domain Architecture
Description	Forkhead box protein D1 (Forkhead-related protein FKHL8) (Forkhead- related transcription factor 4) (FREAC-4).

FOXD2_MOUSE
NC score	0.992554 (rank : 6)	θ value	9.16162e-53 (rank : 6)
Query Neighborhood Hits	98	Target Neighborhood Hits	130	Shared Neighborhood Hits	81
SwissProt Accessions	O35392	Gene names	Foxd2, Mf2
Domain Architecture
Description	Forkhead box protein D2 (Mesoderm/mesenchyme forkhead 2) (MF-2).

FOXD4_MOUSE
NC score	0.988837 (rank : 7)	θ value	5.02714e-51 (rank : 8)
Query Neighborhood Hits	98	Target Neighborhood Hits	98	Shared Neighborhood Hits	81
SwissProt Accessions	Q60688, Q61573	Gene names	Foxd4, Fkh2, Fkhl9, Freac5
Domain Architecture
Description	Forkhead box protein D4 (Forkhead-related protein FKHL9) (Forkhead- related transcription factor 5) (FREAC-5) (Transcription factor FKH- 2).

FOXE3_HUMAN
NC score	0.988691 (rank : 8)	θ value	1.62093e-41 (rank : 12)
Query Neighborhood Hits	98	Target Neighborhood Hits	112	Shared Neighborhood Hits	81
SwissProt Accessions	Q13461, Q5SVY9, Q9NQV9	Gene names	FOXE3, FKHL12, FREAC8
Domain Architecture
Description	Forkhead box protein E3 (Forkhead-related protein FKHL12) (Forkhead- related transcription factor 8) (FREAC-8).

FOXE3_MOUSE
NC score	0.987885 (rank : 9)	θ value	5.21438e-40 (rank : 14)
Query Neighborhood Hits	98	Target Neighborhood Hits	118	Shared Neighborhood Hits	81
SwissProt Accessions	Q9QY14	Gene names	Foxe3
Domain Architecture
Description	Forkhead box protein E3.

FX4L4_HUMAN
NC score	0.987455 (rank : 10)	θ value	5.93839e-52 (rank : 7)
Query Neighborhood Hits	98	Target Neighborhood Hits	101	Shared Neighborhood Hits	82
SwissProt Accessions	Q8WXT5	Gene names	FOXD4L4, FOXD4B
Domain Architecture
Description	Forkhead box protein D4-like 4 (Forkhead box protein D4B) (Myeloid factor-gamma).

FX4L1_HUMAN
NC score	0.987211 (rank : 11)	θ value	6.56568e-51 (rank : 9)
Query Neighborhood Hits	98	Target Neighborhood Hits	111	Shared Neighborhood Hits	83
SwissProt Accessions	Q9NU39	Gene names	FOXD4L1
Domain Architecture
Description	Forkhead box protein D4-like 1.

FOXE1_MOUSE
NC score	0.986722 (rank : 12)	θ value	8.89434e-40 (rank : 16)
Query Neighborhood Hits	98	Target Neighborhood Hits	91	Shared Neighborhood Hits	81
SwissProt Accessions	Q8R2I0	Gene names	Foxe1, Titf2
Domain Architecture
Description	Forkhead box protein E1 (Thyroid transcription factor 2) (TTF-2).

FOXD4_HUMAN
NC score	0.985622 (rank : 13)	θ value	1.11993e-50 (rank : 10)
Query Neighborhood Hits	98	Target Neighborhood Hits	106	Shared Neighborhood Hits	83
SwissProt Accessions	Q12950, Q5VVK1, Q8WXT6	Gene names	FOXD4, FKHL9, FOXD4A, FREAC5
Domain Architecture
Description	Forkhead box protein D4 (Forkhead-related protein FKHL9) (Forkhead- related transcription factor 5) (FREAC-5) (Myeloid factor-alpha).

FOXE1_HUMAN
NC score	0.984074 (rank : 14)	θ value	8.89434e-40 (rank : 15)
Query Neighborhood Hits	98	Target Neighborhood Hits	106	Shared Neighborhood Hits	81
SwissProt Accessions	O00358, O75765	Gene names	FOXE1, FKHL15, TITF2, TTF2
Domain Architecture
Description	Forkhead box protein E1 (Thyroid transcription factor 2) (TTF-2) (Forkhead-related protein FKHL15).

FOXL1_HUMAN
NC score	0.983758 (rank : 15)	θ value	6.59618e-35 (rank : 24)
Query Neighborhood Hits	98	Target Neighborhood Hits	114	Shared Neighborhood Hits	81
SwissProt Accessions	Q12952, Q9H242	Gene names	FOXL1, FKHL11, FREAC7
Domain Architecture
Description	Forkhead box protein L1 (Forkhead-related protein FKHL11) (Forkhead- related transcription factor 7) (FREAC-7).

FOXI2_MOUSE
NC score	0.981955 (rank : 16)	θ value	2.77131e-33 (rank : 37)
Query Neighborhood Hits	98	Target Neighborhood Hits	89	Shared Neighborhood Hits	81
SwissProt Accessions	Q3I5G5, Q8BIK9	Gene names	Foxi2
Domain Architecture	No domain graphic available
Description	Forkhead box protein I2.

FOXB2_MOUSE
NC score	0.980089 (rank : 17)	θ value	1.32909e-35 (rank : 22)
Query Neighborhood Hits	98	Target Neighborhood Hits	139	Shared Neighborhood Hits	82
SwissProt Accessions	Q64733	Gene names	Foxb2, Fkh4
Domain Architecture
Description	Forkhead box protein B2 (Transcription factor FKH-4).

FOXF2_HUMAN
NC score	0.978415 (rank : 18)	θ value	6.17384e-33 (rank : 39)
Query Neighborhood Hits	98	Target Neighborhood Hits	115	Shared Neighborhood Hits	81
SwissProt Accessions	Q12947, Q9UQ85	Gene names	FOXF2, FKHL6, FREAC2
Domain Architecture
Description	Forkhead box protein F2 (Forkhead-related protein FKHL6) (Forkhead- related transcription factor 2) (FREAC-2) (Forkhead-related activator 2).

FOXB1_HUMAN
NC score	0.978197 (rank : 19)	θ value	6.37413e-38 (rank : 19)
Query Neighborhood Hits	98	Target Neighborhood Hits	121	Shared Neighborhood Hits	81
SwissProt Accessions	Q99853, O60652, O75917	Gene names	FOXB1, FKH5
Domain Architecture
Description	Forkhead box protein B1 (Transcription factor FKH-5).

FOXL1_MOUSE
NC score	0.978190 (rank : 20)	θ value	1.9192e-34 (rank : 27)
Query Neighborhood Hits	98	Target Neighborhood Hits	152	Shared Neighborhood Hits	81
SwissProt Accessions	Q64731	Gene names	Foxl1, Fkh6, Fkhl11
Domain Architecture
Description	Forkhead box protein L1 (Forkhead-related protein FKHL11) (Transcription factor FKH-6).

FOXB1_MOUSE
NC score	0.977345 (rank : 21)	θ value	1.20211e-36 (rank : 20)
Query Neighborhood Hits	98	Target Neighborhood Hits	125	Shared Neighborhood Hits	81
SwissProt Accessions	Q64732, O08753	Gene names	Foxb1, Fkh5, Foxb1a, Foxb1b, Mf3
Domain Architecture
Description	Forkhead box protein B1 (Transcription factor FKH-5).

FOXL2_HUMAN
NC score	0.977066 (rank : 22)	θ value	2.12192e-33 (rank : 33)
Query Neighborhood Hits	98	Target Neighborhood Hits	142	Shared Neighborhood Hits	81
SwissProt Accessions	P58012, Q4ZGJ3	Gene names	FOXL2
Domain Architecture
Description	Forkhead box protein L2.

HNF3G_HUMAN
NC score	0.976508 (rank : 23)	θ value	1.6247e-33 (rank : 32)
Query Neighborhood Hits	98	Target Neighborhood Hits	122	Shared Neighborhood Hits	81
SwissProt Accessions	P55318, Q9UMW9	Gene names	FOXA3, HNF3G, TCF3G
Domain Architecture
Description	Hepatocyte nuclear factor 3-gamma (HNF-3G) (Forkhead box protein A3) (Fork head-related protein FKH H3).

HNF3G_MOUSE
NC score	0.976148 (rank : 24)	θ value	1.24399e-33 (rank : 31)
Query Neighborhood Hits	98	Target Neighborhood Hits	103	Shared Neighborhood Hits	81
SwissProt Accessions	P35584	Gene names	Foxa3, Hnf3g, Tcf-3g, Tcf3g
Domain Architecture
Description	Hepatocyte nuclear factor 3-gamma (HNF-3G) (Forkhead box protein A3).

FREA_MOUSE
NC score	0.975897 (rank : 25)	θ value	2.96089e-35 (rank : 23)
Query Neighborhood Hits	98	Target Neighborhood Hits	147	Shared Neighborhood Hits	82
SwissProt Accessions	Q61574, Q8C5N7	Gene names	Fkhl18, Fkh3, Freac10
Domain Architecture	No domain graphic available
Description	Forkhead-related transcription factor 10 (FREAC-10) (Forkhead-like 18 protein) (Transcription factor FKH-3).

FOXL2_MOUSE
NC score	0.975355 (rank : 26)	θ value	2.12192e-33 (rank : 34)
Query Neighborhood Hits	98	Target Neighborhood Hits	151	Shared Neighborhood Hits	81
SwissProt Accessions	O88470, Q8K3X9	Gene names	Foxl2, Pfrk
Domain Architecture	No domain graphic available
Description	Forkhead box protein L2 (Pituitary forkhead factor) (P-Frk).

FOXC2_MOUSE
NC score	0.974688 (rank : 27)	θ value	6.15952e-41 (rank : 13)
Query Neighborhood Hits	98	Target Neighborhood Hits	124	Shared Neighborhood Hits	81
SwissProt Accessions	Q61850, P97948, Q63869, Q8C694	Gene names	Foxc2, Fkh14, Fkhl14, Mfh1
Domain Architecture
Description	Forkhead box protein C2 (Forkhead-related protein FKHL14) (Mesenchyme fork head protein 1) (MFH-1 protein) (Transcription factor FKH-14).

FOXQ1_HUMAN
NC score	0.974168 (rank : 28)	θ value	5.97985e-28 (rank : 44)
Query Neighborhood Hits	98	Target Neighborhood Hits	115	Shared Neighborhood Hits	82
SwissProt Accessions	Q9C009, Q9NS06	Gene names	FOXQ1, HFH1
Domain Architecture
Description	Forkhead box protein Q1 (Hepatocyte nuclear factor 3 forkhead homolog 1) (HNF-3/forkhead-like protein 1) (HFH-1).

FREA_HUMAN
NC score	0.973827 (rank : 29)	θ value	1.20211e-36 (rank : 21)
Query Neighborhood Hits	98	Target Neighborhood Hits	205	Shared Neighborhood Hits	81
SwissProt Accessions	O43638, Q96D28	Gene names	FKHL18, FREAC10
Domain Architecture	No domain graphic available
Description	Forkhead-related transcription factor 10 (FREAC-10) (Forkhead-like 18 protein).

FOXI1_HUMAN
NC score	0.973398 (rank : 30)	θ value	9.52487e-34 (rank : 30)
Query Neighborhood Hits	98	Target Neighborhood Hits	104	Shared Neighborhood Hits	81
SwissProt Accessions	Q12951, Q14518, Q66SR7, Q8N6L8	Gene names	FOXI1, FKHL10, FREAC6
Domain Architecture
Description	Forkhead box protein I1 (Forkhead-related protein FKHL10) (Forkhead- related transcription factor 6) (FREAC-6) (Hepatocyte nuclear factor 3 forkhead homolog 3) (HNF-3/fork-head homolog 3) (HFH-3).

FOXQ1_MOUSE
NC score	0.973053 (rank : 31)	θ value	5.97985e-28 (rank : 45)
Query Neighborhood Hits	98	Target Neighborhood Hits	96	Shared Neighborhood Hits	82
SwissProt Accessions	O70220	Gene names	Foxq1, Hfh1, Hfh1l
Domain Architecture
Description	Forkhead box protein Q1 (Hepatocyte nuclear factor 3 forkhead homolog 1) (HNF-3/forkhead-like protein 1) (HFH-1) (HFH-1l).

FOXF1_MOUSE
NC score	0.972977 (rank : 32)	θ value	6.17384e-33 (rank : 38)
Query Neighborhood Hits	98	Target Neighborhood Hits	86	Shared Neighborhood Hits	81
SwissProt Accessions	Q61080, Q61661	Gene names	Foxf1, Fkhl5, Foxf1a, Freac1, Hfh8
Domain Architecture
Description	Forkhead box protein F1 (Forkhead-related protein FKHL5) (Forkhead- related transcription factor 1) (FREAC-1) (Hepatocyte nuclear factor 3 forkhead homolog 8) (HFH-8).

HNF3B_MOUSE
NC score	0.972892 (rank : 33)	θ value	6.59618e-35 (rank : 26)
Query Neighborhood Hits	98	Target Neighborhood Hits	112	Shared Neighborhood Hits	81
SwissProt Accessions	P35583, Q60602	Gene names	Foxa2, Hnf3b, Tcf-3b, Tcf3b
Domain Architecture
Description	Hepatocyte nuclear factor 3-beta (HNF-3B) (Forkhead box protein A2).

HNF3B_HUMAN
NC score	0.972585 (rank : 34)	θ value	6.59618e-35 (rank : 25)
Query Neighborhood Hits	98	Target Neighborhood Hits	106	Shared Neighborhood Hits	81
SwissProt Accessions	Q9Y261, Q8WUW4, Q96DF7	Gene names	FOXA2, HNF3B, TCF3B
Domain Architecture
Description	Hepatocyte nuclear factor 3-beta (HNF-3B) (Forkhead box protein A2).

FOXI1_MOUSE
NC score	0.971868 (rank : 35)	θ value	2.77131e-33 (rank : 36)
Query Neighborhood Hits	98	Target Neighborhood Hits	118	Shared Neighborhood Hits	81
SwissProt Accessions	Q922I5, Q5SRI5, Q9D299	Gene names	Foxi1
Domain Architecture	No domain graphic available
Description	Forkhead box protein I1.

FOXF1_HUMAN
NC score	0.971357 (rank : 36)	θ value	2.77131e-33 (rank : 35)
Query Neighborhood Hits	98	Target Neighborhood Hits	106	Shared Neighborhood Hits	81
SwissProt Accessions	Q12946, Q5FWE5	Gene names	FOXF1, FKHL5, FREAC1
Domain Architecture
Description	Forkhead box protein F1 (Forkhead-related protein FKHL5) (Forkhead- related transcription factor 1) (FREAC-1) (Forkhead-related activator 1).

FOXC1_MOUSE
NC score	0.968679 (rank : 37)	θ value	1.16164e-39 (rank : 18)
Query Neighborhood Hits	98	Target Neighborhood Hits	218	Shared Neighborhood Hits	81
SwissProt Accessions	Q61572, O88409, Q61582	Gene names	Foxc1, Fkh1, Fkhl7, Freac3, Mf1
Domain Architecture
Description	Forkhead box protein C1 (Forkhead-related protein FKHL7) (Forkhead- related transcription factor 3) (FREAC-3) (Transcription factor FKH-1) (Mesoderm/mesenchyme forkhead 1) (MF-1).

FOXC1_HUMAN
NC score	0.968513 (rank : 38)	θ value	1.16164e-39 (rank : 17)
Query Neighborhood Hits	98	Target Neighborhood Hits	208	Shared Neighborhood Hits	81
SwissProt Accessions	Q12948, Q86UP7, Q9BYM1, Q9NUE5, Q9UDD0, Q9UP06	Gene names	FOXC1, FKHL7, FREAC3
Domain Architecture
Description	Forkhead box protein C1 (Forkhead-related protein FKHL7) (Forkhead- related transcription factor 3) (FREAC-3).

FOXC2_HUMAN
NC score	0.968449 (rank : 39)	θ value	5.03882e-43 (rank : 11)
Query Neighborhood Hits	98	Target Neighborhood Hits	236	Shared Neighborhood Hits	81
SwissProt Accessions	Q99958	Gene names	FOXC2, FKHL14, MFH1
Domain Architecture
Description	Forkhead box protein C2 (Forkhead-related protein FKHL14) (Mesenchyme fork head protein 1) (MFH-1 protein) (Transcription factor FKH-14).

HNF3A_HUMAN
NC score	0.968030 (rank : 40)	θ value	7.29293e-34 (rank : 29)
Query Neighborhood Hits	98	Target Neighborhood Hits	119	Shared Neighborhood Hits	83
SwissProt Accessions	P55317, Q9H2A0	Gene names	FOXA1, HNF3A, TCF3A
Domain Architecture
Description	Hepatocyte nuclear factor 3-alpha (HNF-3A) (Forkhead box protein A1).

HNF3A_MOUSE
NC score	0.965898 (rank : 41)	θ value	2.50655e-34 (rank : 28)
Query Neighborhood Hits	98	Target Neighborhood Hits	140	Shared Neighborhood Hits	83
SwissProt Accessions	P35582, Q61108	Gene names	Foxa1, Hnf3a, Tcf-3a, Tcf3a
Domain Architecture
Description	Hepatocyte nuclear factor 3-alpha (HNF-3A) (Forkhead box protein A1).

FOXGA_HUMAN
NC score	0.965568 (rank : 42)	θ value	5.77852e-31 (rank : 42)
Query Neighborhood Hits	98	Target Neighborhood Hits	132	Shared Neighborhood Hits	81
SwissProt Accessions	P55316	Gene names	FOXG1A, FKHL2
Domain Architecture
Description	Forkhead box protein G1A (Forkhead-related protein FKHL2) (Transcription factor BF-2) (Brain factor 2) (BF2) (HFK2).

FOXGB_MOUSE
NC score	0.965016 (rank : 43)	θ value	5.22648e-32 (rank : 40)
Query Neighborhood Hits	98	Target Neighborhood Hits	148	Shared Neighborhood Hits	82
SwissProt Accessions	Q60987, Q80VP3	Gene names	Foxg1b, Fkhl1, Foxg1, Hfhbf1
Domain Architecture
Description	Forkhead box protein G1B (Forkhead-related protein FKHL1) (Transcription factor BF-1) (Brain factor 1) (BF1).

FOXGB_HUMAN
NC score	0.964389 (rank : 44)	θ value	6.82597e-32 (rank : 41)
Query Neighborhood Hits	98	Target Neighborhood Hits	123	Shared Neighborhood Hits	83
SwissProt Accessions	P55315	Gene names	FOXG1B, FKHL1
Domain Architecture
Description	Forkhead box protein G1B (Forkhead-related protein FKHL1) (Transcription factor BF-1) (Brain factor 1) (BF1) (HFK1).

FOXJ1_HUMAN
NC score	0.956911 (rank : 45)	θ value	7.30988e-26 (rank : 46)
Query Neighborhood Hits	98	Target Neighborhood Hits	99	Shared Neighborhood Hits	81
SwissProt Accessions	Q92949, O00630	Gene names	FOXJ1, FKHL13, HFH4
Domain Architecture
Description	Forkhead box protein J1 (Forkhead-related protein FKHL13) (Hepatocyte nuclear factor 3 forkhead homolog 4) (HFH-4).

FOXE2_HUMAN
NC score	0.954750 (rank : 46)	θ value	2.68423e-28 (rank : 43)
Query Neighborhood Hits	98	Target Neighborhood Hits	236	Shared Neighborhood Hits	85
SwissProt Accessions	Q99526	Gene names	FOXE2
Domain Architecture
Description	Forkhead box protein E2 (HNF-3/fork head-like protein 5) (HFKL5) (HFKH4).

FOXJ1_MOUSE
NC score	0.948577 (rank : 47)	θ value	7.30988e-26 (rank : 47)
Query Neighborhood Hits	98	Target Neighborhood Hits	209	Shared Neighborhood Hits	86
SwissProt Accessions	Q61660	Gene names	Foxj1, Fkhl13, Hfh4
Domain Architecture
Description	Forkhead box protein J1 (Forkhead-related protein FKHL13) (Hepatocyte nuclear factor 3 forkhead homolog 4) (HFH-4).

FOXK2_HUMAN
NC score	0.948145 (rank : 48)	θ value	8.08199e-25 (rank : 48)
Query Neighborhood Hits	98	Target Neighborhood Hits	190	Shared Neighborhood Hits	82
SwissProt Accessions	Q01167, Q13622, Q13623, Q13624	Gene names	FOXK2, ILF, ILF1
Domain Architecture
Description	Forkhead box protein K2 (Interleukin enhancer-binding factor 1) (Cellular transcription factor ILF-1).

FOXK1_MOUSE
NC score	0.942848 (rank : 49)	θ value	2.59989e-23 (rank : 51)
Query Neighborhood Hits	98	Target Neighborhood Hits	215	Shared Neighborhood Hits	81
SwissProt Accessions	P42128, O35939	Gene names	Foxk1, Mnf
Domain Architecture
Description	Forkhead box protein K1 (Myocyte nuclear factor) (MNF).

FOXJ3_MOUSE
NC score	0.934803 (rank : 50)	θ value	1.05554e-24 (rank : 50)
Query Neighborhood Hits	98	Target Neighborhood Hits	190	Shared Neighborhood Hits	81
SwissProt Accessions	Q8BUR3, Q3UTD8	Gene names	Foxj3, Kiaa1041
Domain Architecture
Description	Forkhead box protein J3.

FOXJ3_HUMAN
NC score	0.934761 (rank : 51)	θ value	1.05554e-24 (rank : 49)
Query Neighborhood Hits	98	Target Neighborhood Hits	177	Shared Neighborhood Hits	81
SwissProt Accessions	Q9UPW0, Q9NSS7	Gene names	FOXJ3, KIAA1041
Domain Architecture
Description	Forkhead box protein J3.

FOXH1_MOUSE
NC score	0.931151 (rank : 52)	θ value	8.10077e-17 (rank : 55)
Query Neighborhood Hits	98	Target Neighborhood Hits	118	Shared Neighborhood Hits	81
SwissProt Accessions	O88621, Q9QZL5, Q9R241	Gene names	Foxh1, Fast1, Fast2
Domain Architecture
Description	Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (Forkhead activin signal transducer 2) (Fast-2).

FOXJ2_MOUSE
NC score	0.930881 (rank : 53)	θ value	1.42661e-21 (rank : 53)
Query Neighborhood Hits	98	Target Neighborhood Hits	151	Shared Neighborhood Hits	81
SwissProt Accessions	Q9ES18	Gene names	Foxj2, Fhx
Domain Architecture
Description	Forkhead box protein J2 (Fork head homologous X).

FOXN2_HUMAN
NC score	0.927766 (rank : 54)	θ value	1.80466e-16 (rank : 56)
Query Neighborhood Hits	98	Target Neighborhood Hits	85	Shared Neighborhood Hits	81
SwissProt Accessions	P32314, Q15769	Gene names	FOXN2, HTLF
Domain Architecture
Description	Forkhead box protein N2 (Human T-cell leukemia virus enhancer factor).

FOXH1_HUMAN
NC score	0.926227 (rank : 55)	θ value	2.5182e-18 (rank : 54)
Query Neighborhood Hits	98	Target Neighborhood Hits	258	Shared Neighborhood Hits	86
SwissProt Accessions	O75593	Gene names	FOXH1, FAST1, FAST2
Domain Architecture
Description	Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (hFAST-1) (Forkhead activin signal transducer 2) (Fast-2).

FOXJ2_HUMAN
NC score	0.924409 (rank : 56)	θ value	1.42661e-21 (rank : 52)
Query Neighborhood Hits	98	Target Neighborhood Hits	239	Shared Neighborhood Hits	81
SwissProt Accessions	Q9P0K8, Q96PS9, Q9NSN5	Gene names	FOXJ2, FHX
Domain Architecture
Description	Forkhead box protein J2 (Fork head homologous X).

FOXN3_MOUSE
NC score	0.911060 (rank : 57)	θ value	3.07829e-16 (rank : 58)
Query Neighborhood Hits	98	Target Neighborhood Hits	114	Shared Neighborhood Hits	81
SwissProt Accessions	Q499D0, Q8C5N8, Q9CU83	Gene names	Ches1, Foxn3
Domain Architecture	No domain graphic available
Description	Checkpoint suppressor 1 (Forkhead box protein N3).

FOXN3_HUMAN
NC score	0.909222 (rank : 58)	θ value	1.80466e-16 (rank : 57)
Query Neighborhood Hits	98	Target Neighborhood Hits	121	Shared Neighborhood Hits	81
SwissProt Accessions	O00409, Q96II7, Q9UIE7	Gene names	CHES1, FOXN3
Domain Architecture
Description	Checkpoint suppressor 1 (Forkhead box protein N3).

FOXM1_MOUSE
NC score	0.882546 (rank : 59)	θ value	9.90251e-15 (rank : 62)
Query Neighborhood Hits	98	Target Neighborhood Hits	134	Shared Neighborhood Hits	81
SwissProt Accessions	O08696	Gene names	Foxm1, Fkh16
Domain Architecture
Description	Forkhead box protein M1 (Forkhead homolog 16) (Winged-helix transcription factor Trident).

FOXM1_HUMAN
NC score	0.872935 (rank : 60)	θ value	2.20605e-14 (rank : 64)
Query Neighborhood Hits	98	Target Neighborhood Hits	167	Shared Neighborhood Hits	81
SwissProt Accessions	Q08050, O43258, O43259, O43260, Q4ZGG7, Q9BRL2	Gene names	FOXM1, FKHL16, HFH11, MPP2, WIN
Domain Architecture
Description	Forkhead box protein M1 (Forkhead-related protein FKHL16) (Hepatocyte nuclear factor 3 forkhead homolog 11) (HNF-3/fork-head homolog 11) (HFH-11) (Winged helix factor from INS-1 cells) (M-phase phosphoprotein 2) (MPM-2 reactive phosphoprotein 2) (Transcription factor Trident).

FOXN4_MOUSE
NC score	0.865181 (rank : 61)	θ value	2.0648e-12 (rank : 73)
Query Neighborhood Hits	98	Target Neighborhood Hits	154	Shared Neighborhood Hits	82
SwissProt Accessions	Q8K3Q3, Q920C0	Gene names	Foxn4
Domain Architecture
Description	Forkhead box protein N4.

FOXP3_HUMAN
NC score	0.857784 (rank : 62)	θ value	7.09661e-13 (rank : 71)
Query Neighborhood Hits	98	Target Neighborhood Hits	105	Shared Neighborhood Hits	82
SwissProt Accessions	Q9BZS1, O60827, Q4ZH51	Gene names	FOXP3, IPEX
Domain Architecture
Description	Forkhead box protein P3 (Scurfin).

FOXP3_MOUSE
NC score	0.855903 (rank : 63)	θ value	5.43371e-13 (rank : 69)
Query Neighborhood Hits	98	Target Neighborhood Hits	117	Shared Neighborhood Hits	81
SwissProt Accessions	Q99JB6	Gene names	Foxp3
Domain Architecture
Description	Forkhead box protein P3 (Scurfin).

FOXN4_HUMAN
NC score	0.854935 (rank : 64)	θ value	2.69671e-12 (rank : 74)
Query Neighborhood Hits	98	Target Neighborhood Hits	248	Shared Neighborhood Hits	81
SwissProt Accessions	Q96NZ1, Q6ZMR4, Q96NZ0	Gene names	FOXN4
Domain Architecture	No domain graphic available
Description	Forkhead box protein N4.

FOXO4_HUMAN
NC score	0.846779 (rank : 65)	θ value	7.09661e-13 (rank : 70)
Query Neighborhood Hits	98	Target Neighborhood Hits	197	Shared Neighborhood Hits	81
SwissProt Accessions	P98177, O43821, Q13720, Q3KPF1, Q8TDK9	Gene names	MLLT7, AFX, AFX1, FOXO4
Domain Architecture
Description	Fork head domain transcription factor AFX1 (Forkhead box protein O4).

FOXN1_MOUSE
NC score	0.845886 (rank : 66)	θ value	3.18553e-13 (rank : 68)
Query Neighborhood Hits	98	Target Neighborhood Hits	300	Shared Neighborhood Hits	84
SwissProt Accessions	Q61575	Gene names	Foxn1, Fkh19, Hfh11, Whn
Domain Architecture
Description	Forkhead box protein N1 (Transcription factor winged-helix nude) (Hepatocyte nuclear factor 3 forkhead homolog 11) (HNF-3/forkhead homolog 11) (HFH-11).

FOXO4_MOUSE
NC score	0.842242 (rank : 67)	θ value	1.2105e-12 (rank : 72)
Query Neighborhood Hits	98	Target Neighborhood Hits	168	Shared Neighborhood Hits	81
SwissProt Accessions	Q9WVH3	Gene names	Mllt7, Afx, Afx1, Fkhr3, Foxo4
Domain Architecture
Description	Fork head domain transcription factor AFX1 (Afxh) (Forkhead box protein O4).

FOXR2_MOUSE
NC score	0.840479 (rank : 68)	θ value	1.9326e-10 (rank : 78)
Query Neighborhood Hits	98	Target Neighborhood Hits	88	Shared Neighborhood Hits	81
SwissProt Accessions	Q3UM89	Gene names	Foxr2, Foxn6
Domain Architecture	No domain graphic available
Description	Forkhead box protein R2 (Forkhead box protein N6).

FOXR1_MOUSE
NC score	0.839787 (rank : 69)	θ value	1.06045e-08 (rank : 79)
Query Neighborhood Hits	98	Target Neighborhood Hits	84	Shared Neighborhood Hits	81
SwissProt Accessions	Q3UTB7	Gene names	Foxr1, Foxn5
Domain Architecture	No domain graphic available
Description	Forkhead box protein R1 (Forkhead box protein N5).

FOXN1_HUMAN
NC score	0.837064 (rank : 70)	θ value	3.18553e-13 (rank : 67)
Query Neighborhood Hits	98	Target Neighborhood Hits	377	Shared Neighborhood Hits	86
SwissProt Accessions	O15353, O15352	Gene names	FOXN1, WHN
Domain Architecture
Description	Forkhead box protein N1 (Transcription factor winged-helix nude).

FOXO3_HUMAN
NC score	0.836535 (rank : 71)	θ value	6.64225e-11 (rank : 77)
Query Neighborhood Hits	98	Target Neighborhood Hits	105	Shared Neighborhood Hits	81
SwissProt Accessions	O43524, O15171, Q5T2I7, Q9BZ04	Gene names	FOXO3A, FKHRL1
Domain Architecture
Description	Forkhead box protein O3A (Forkhead in rhabdomyosarcoma-like 1) (AF6q21 protein).

FOXP1_HUMAN
NC score	0.828269 (rank : 72)	θ value	1.52774e-15 (rank : 59)
Query Neighborhood Hits	98	Target Neighborhood Hits	168	Shared Neighborhood Hits	81
SwissProt Accessions	Q9H334, Q9H332, Q9H333, Q9P0R1	Gene names	FOXP1
Domain Architecture
Description	Forkhead box protein P1.

FOXP4_MOUSE
NC score	0.824379 (rank : 73)	θ value	1.68911e-14 (rank : 63)
Query Neighborhood Hits	98	Target Neighborhood Hits	211	Shared Neighborhood Hits	82
SwissProt Accessions	Q9DBY0, Q80V92, Q8CG10, Q8CIS1	Gene names	Foxp4
Domain Architecture	No domain graphic available
Description	Forkhead box protein P4 (Fork head-related protein like A) (mFKHLA).

FOXP4_HUMAN
NC score	0.820554 (rank : 74)	θ value	7.58209e-15 (rank : 61)
Query Neighborhood Hits	98	Target Neighborhood Hits	246	Shared Neighborhood Hits	82
SwissProt Accessions	Q8IVH2, Q96E19	Gene names	FOXP4, FKHLA
Domain Architecture
Description	Forkhead box protein P4 (Fork head-related protein-like A).

FOXO1_MOUSE
NC score	0.819603 (rank : 75)	θ value	5.08577e-11 (rank : 76)
Query Neighborhood Hits	98	Target Neighborhood Hits	118	Shared Neighborhood Hits	81
SwissProt Accessions	Q9R1E0	Gene names	Foxo1a, Fkhr, Foxo1
Domain Architecture
Description	Forkhead box protein O1A (Forkhead in rhabdomyosarcoma).

FOXP1_MOUSE
NC score	0.819344 (rank : 76)	θ value	1.52774e-15 (rank : 60)
Query Neighborhood Hits	98	Target Neighborhood Hits	241	Shared Neighborhood Hits	81
SwissProt Accessions	P58462	Gene names	Foxp1
Domain Architecture
Description	Forkhead box protein P1 (Forkhead-related transcription factor 1).

FOXO1_HUMAN
NC score	0.819240 (rank : 77)	θ value	2.98157e-11 (rank : 75)
Query Neighborhood Hits	98	Target Neighborhood Hits	126	Shared Neighborhood Hits	81
SwissProt Accessions	Q12778, O43523, Q5VYC7, Q6NSK6	Gene names	FOXO1A, FKHR
Domain Architecture
Description	Forkhead box protein O1A (Forkhead in rhabdomyosarcoma).

FOXR1_HUMAN
NC score	0.808158 (rank : 78)	θ value	7.59969e-07 (rank : 80)
Query Neighborhood Hits	98	Target Neighborhood Hits	85	Shared Neighborhood Hits	81
SwissProt Accessions	Q6PIV2, Q86UT9, Q8IXX2	Gene names	FOXR1, DLNB13, FOXN5
Domain Architecture	No domain graphic available
Description	Forkhead box protein R1 (Forkhead box protein N5).

FOXP2_HUMAN
NC score	0.780669 (rank : 79)	θ value	1.42992e-13 (rank : 65)
Query Neighborhood Hits	98	Target Neighborhood Hits	366	Shared Neighborhood Hits	82
SwissProt Accessions	O15409, Q6ZND1, Q75MJ3, Q8IZE0, Q8N0W2, Q8N6B7, Q8N6B8, Q8NFQ1, Q8NFQ2, Q8NFQ3, Q8NFQ4, Q8TD74	Gene names	FOXP2, CAGH44, TNRC10
Domain Architecture
Description	Forkhead box protein P2 (CAG repeat protein 44) (Trinucleotide repeat- containing gene 10 protein).

FOXP2_MOUSE
NC score	0.778127 (rank : 80)	θ value	1.42992e-13 (rank : 66)
Query Neighborhood Hits	98	Target Neighborhood Hits	366	Shared Neighborhood Hits	81
SwissProt Accessions	P58463, Q6PD37, Q8C4F0, Q8R441	Gene names	Foxp2
Domain Architecture
Description	Forkhead box protein P2.

FOXR2_HUMAN
NC score	0.700498 (rank : 81)	θ value	0.000461057 (rank : 81)
Query Neighborhood Hits	98	Target Neighborhood Hits	97	Shared Neighborhood Hits	81
SwissProt Accessions	Q6PJQ5	Gene names	FOXR2, FOXN6
Domain Architecture	No domain graphic available
Description	Forkhead box protein R2 (Forkhead box protein N6).

CO9A1_MOUSE
NC score	0.015801 (rank : 82)	θ value	0.813845 (rank : 82)
Query Neighborhood Hits	98	Target Neighborhood Hits	477	Shared Neighborhood Hits	15
SwissProt Accessions	Q05722, Q61269, Q61270, Q61433, Q61940	Gene names	Col9a1
Domain Architecture
Description	Collagen alpha-1(IX) chain precursor.

APOB_HUMAN
NC score	0.013470 (rank : 83)	θ value	2.36792 (rank : 85)
Query Neighborhood Hits	98	Target Neighborhood Hits	202	Shared Neighborhood Hits	4
SwissProt Accessions	P04114, O00502, P78479, P78480, P78481, Q13779, Q13785, Q13786, Q13787, Q13788, Q7Z600, Q9UMN0	Gene names	APOB
Domain Architecture
Description	Apolipoprotein B-100 precursor (Apo B-100) [Contains: Apolipoprotein B-48 (Apo B-48)].

CO5A2_HUMAN
NC score	0.011431 (rank : 84)	θ value	4.03905 (rank : 88)
Query Neighborhood Hits	98	Target Neighborhood Hits	760	Shared Neighborhood Hits	18
SwissProt Accessions	P05997	Gene names	COL5A2
Domain Architecture
Description	Collagen alpha-2(V) chain precursor.

CO9A2_HUMAN
NC score	0.011188 (rank : 85)	θ value	1.06291 (rank : 83)
Query Neighborhood Hits	98	Target Neighborhood Hits	261	Shared Neighborhood Hits	11
SwissProt Accessions	Q14055	Gene names	COL9A2
Domain Architecture	No domain graphic available
Description	Collagen alpha-2(IX) chain precursor.

CO9A3_HUMAN
NC score	0.010963 (rank : 86)	θ value	2.36792 (rank : 86)
Query Neighborhood Hits	98	Target Neighborhood Hits	361	Shared Neighborhood Hits	12
SwissProt Accessions	Q14050, Q13681, Q9H4G9, Q9UPE2	Gene names	COL9A3
Domain Architecture	No domain graphic available
Description	Collagen alpha-3(IX) chain precursor.

CSPG5_MOUSE
NC score	0.010230 (rank : 87)	θ value	8.99809 (rank : 96)
Query Neighborhood Hits	98	Target Neighborhood Hits	211	Shared Neighborhood Hits	6
SwissProt Accessions	Q71M36, Q71M37, Q7TNT8, Q8BPJ5, Q9QY32	Gene names	Cspg5, Caleb, Ngc
Domain Architecture	No domain graphic available
Description	Chondroitin sulfate proteoglycan 5 precursor (Neuroglycan C) (Acidic leucine-rich EGF-like domain-containing brain protein).

NMDE4_HUMAN
NC score	0.009331 (rank : 88)	θ value	4.03905 (rank : 92)
Query Neighborhood Hits	98	Target Neighborhood Hits	133	Shared Neighborhood Hits	9
SwissProt Accessions	O15399	Gene names	GRIN2D
Domain Architecture
Description	Glutamate [NMDA] receptor subunit epsilon 4 precursor (N-methyl D- aspartate receptor subtype 2D) (NR2D) (NMDAR2D) (EB11).

CO9A1_HUMAN
NC score	0.007741 (rank : 89)	θ value	4.03905 (rank : 89)
Query Neighborhood Hits	98	Target Neighborhood Hits	420	Shared Neighborhood Hits	11
SwissProt Accessions	P20849, Q13699, Q13700, Q5TF52, Q6P467, Q96BM8, Q99225, Q9H151, Q9H152, Q9Y6P2, Q9Y6P3	Gene names	COL9A1
Domain Architecture
Description	Collagen alpha-1(IX) chain precursor.

ENT1_HUMAN
NC score	0.007712 (rank : 90)	θ value	4.03905 (rank : 91)
Query Neighborhood Hits	98	Target Neighborhood Hits	18	Shared Neighborhood Hits	2
SwissProt Accessions	P61550	Gene names
Domain Architecture	No domain graphic available
Description	HERV-T_19q13.11 provirus ancestral Env polyprotein precursor (Envelope polyprotein) (HERV-T Env protein) [Includes: Surface protein (SU); Transmembrane protein (TM)].

CO9A2_MOUSE
NC score	0.007646 (rank : 91)	θ value	6.88961 (rank : 95)
Query Neighborhood Hits	98	Target Neighborhood Hits	279	Shared Neighborhood Hits	10
SwissProt Accessions	Q07643	Gene names	Col9a2
Domain Architecture	No domain graphic available
Description	Collagen alpha-2(IX) chain precursor.

NMDE4_MOUSE
NC score	0.007524 (rank : 92)	θ value	4.03905 (rank : 93)
Query Neighborhood Hits	98	Target Neighborhood Hits	158	Shared Neighborhood Hits	7
SwissProt Accessions	Q03391	Gene names	Grin2d
Domain Architecture
Description	Glutamate [NMDA] receptor subunit epsilon 4 precursor (N-methyl D- aspartate receptor subtype 2D) (NR2D) (NMDAR2D).

COBA1_HUMAN
NC score	0.006707 (rank : 93)	θ value	4.03905 (rank : 90)
Query Neighborhood Hits	98	Target Neighborhood Hits	491	Shared Neighborhood Hits	12
SwissProt Accessions	P12107, Q14034, Q9UIT4, Q9UIT5, Q9UIT6	Gene names	COL11A1
Domain Architecture
Description	Collagen alpha-1(XI) chain precursor.

ULE1B_MOUSE
NC score	0.006489 (rank : 94)	θ value	3.0926 (rank : 87)
Query Neighborhood Hits	98	Target Neighborhood Hits	56	Shared Neighborhood Hits	2
SwissProt Accessions	Q9Z1F9, Q8BVX9	Gene names	Uble1b, Sae2, Uba2
Domain Architecture
Description	Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating enzyme subunit 2) (Anthracycline-associated resistance ARX).

CO7A1_HUMAN
NC score	0.005429 (rank : 95)	θ value	6.88961 (rank : 94)
Query Neighborhood Hits	98	Target Neighborhood Hits	807	Shared Neighborhood Hits	17
SwissProt Accessions	Q02388, Q14054, Q16507	Gene names	COL7A1
Domain Architecture
Description	Collagen alpha-1(VII) chain precursor (Long-chain collagen) (LC collagen).

TOPRS_MOUSE
NC score	0.003362 (rank : 96)	θ value	8.99809 (rank : 98)
Query Neighborhood Hits	98	Target Neighborhood Hits	263	Shared Neighborhood Hits	3
SwissProt Accessions	Q80Z37, Q3U5B5, Q3UPZ1, Q3USN3, Q3UZ55, Q8BXP2, Q8CFF5, Q8CGC8, Q920L3	Gene names	Topors
Domain Architecture	No domain graphic available
Description	Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-) (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-binding protein 3) (p53BP3).

SYNE1_HUMAN
NC score	-0.002500 (rank : 97)	θ value	1.81305 (rank : 84)
Query Neighborhood Hits	98	Target Neighborhood Hits	1484	Shared Neighborhood Hits	6
SwissProt Accessions	Q8NF91, O94890, Q5JV19, Q5JV22, Q8N9P7, Q8TCP1, Q8WWW6, Q8WWW7, Q8WXF6, Q96N17, Q9C0A7, Q9H525, Q9H526, Q9NS36, Q9NU50, Q9UJ06, Q9UJ07, Q9ULF8	Gene names	SYNE1, KIAA0796, KIAA1262, KIAA1756, MYNE1
Domain Architecture
Description	Nesprin-1 (Nuclear envelope spectrin repeat protein 1) (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte nuclear envelope protein 1) (Myne-1) (Enaptin).

MYLK_HUMAN
NC score	-0.009246 (rank : 98)	θ value	8.99809 (rank : 97)
Query Neighborhood Hits	98	Target Neighborhood Hits	1328	Shared Neighborhood Hits	4
SwissProt Accessions	Q15746, O95796, O95797, O95798, O95799, Q14844, Q16794, Q5MY99, Q5MYA0, Q7Z4J0, Q9C0L5, Q9UBG5, Q9UIT9	Gene names	MYLK, MLCK
Domain Architecture
Description	Myosin light chain kinase, smooth muscle (EC 2.7.11.18) (MLCK) (Telokin) (Kinase-related protein) (KRP).