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Network neighborhood for query Sequence : FOXJ1_HUMAN

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FOXJ1_HUMAN
SwissProt Accessions	Q92949, O00630	Gene names	FOXJ1, FKHL13, HFH4
Domain Architecture
Description	Forkhead box protein J1 (Forkhead-related protein FKHL13) (Hepatocyte nuclear factor 3 forkhead homolog 4) (HFH-4).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

FOXJ1_HUMAN
θ value	0 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	99	Target Neighborhood Hits	99	Shared Neighborhood Hits	99
SwissProt Accessions	Q92949, O00630	Gene names	FOXJ1, FKHL13, HFH4
Domain Architecture
Description	Forkhead box protein J1 (Forkhead-related protein FKHL13) (Hepatocyte nuclear factor 3 forkhead homolog 4) (HFH-4).

FOXJ1_MOUSE
θ value	0 (rank : 2)	NC score	0.990089 (rank : 2)
Query Neighborhood Hits	99	Target Neighborhood Hits	209	Shared Neighborhood Hits	90
SwissProt Accessions	Q61660	Gene names	Foxj1, Fkhl13, Hfh4
Domain Architecture
Description	Forkhead box protein J1 (Forkhead-related protein FKHL13) (Hepatocyte nuclear factor 3 forkhead homolog 4) (HFH-4).

FOXD2_HUMAN
θ value	4.14116e-29 (rank : 3)	NC score	0.962974 (rank : 5)
Query Neighborhood Hits	99	Target Neighborhood Hits	143	Shared Neighborhood Hits	81
SwissProt Accessions	O60548	Gene names	FOXD2, FKHL17, FREAC9
Domain Architecture
Description	Forkhead box protein D2 (Forkhead-related protein FKHL17) (Forkhead- related transcription factor 9) (FREAC-9).

FOXD2_MOUSE
θ value	4.14116e-29 (rank : 4)	NC score	0.962660 (rank : 6)
Query Neighborhood Hits	99	Target Neighborhood Hits	130	Shared Neighborhood Hits	81
SwissProt Accessions	O35392	Gene names	Foxd2, Mf2
Domain Architecture
Description	Forkhead box protein D2 (Mesoderm/mesenchyme forkhead 2) (MF-2).

FOXK2_HUMAN
θ value	2.05525e-28 (rank : 5)	NC score	0.948807 (rank : 37)
Query Neighborhood Hits	99	Target Neighborhood Hits	190	Shared Neighborhood Hits	81
SwissProt Accessions	Q01167, Q13622, Q13623, Q13624	Gene names	FOXK2, ILF, ILF1
Domain Architecture
Description	Forkhead box protein K2 (Interleukin enhancer-binding factor 1) (Cellular transcription factor ILF-1).

FOXD1_MOUSE
θ value	4.57862e-28 (rank : 6)	NC score	0.964720 (rank : 3)
Query Neighborhood Hits	99	Target Neighborhood Hits	111	Shared Neighborhood Hits	81
SwissProt Accessions	Q61345	Gene names	Foxd1, Fkhl8, Freac4, Hfhbf2
Domain Architecture
Description	Forkhead box protein D1 (Forkhead-related protein FKHL8) (Forkhead- related transcription factor 4) (FREAC-4) (Brain factor 2) (HFH-BF-2).

FREA_HUMAN
θ value	4.57862e-28 (rank : 7)	NC score	0.951067 (rank : 28)
Query Neighborhood Hits	99	Target Neighborhood Hits	205	Shared Neighborhood Hits	84
SwissProt Accessions	O43638, Q96D28	Gene names	FKHL18, FREAC10
Domain Architecture	No domain graphic available
Description	Forkhead-related transcription factor 10 (FREAC-10) (Forkhead-like 18 protein).

FOXJ2_MOUSE
θ value	7.80994e-28 (rank : 8)	NC score	0.943972 (rank : 45)
Query Neighborhood Hits	99	Target Neighborhood Hits	151	Shared Neighborhood Hits	83
SwissProt Accessions	Q9ES18	Gene names	Foxj2, Fhx
Domain Architecture
Description	Forkhead box protein J2 (Fork head homologous X).

FOXJ3_HUMAN
θ value	1.73987e-27 (rank : 9)	NC score	0.941320 (rank : 49)
Query Neighborhood Hits	99	Target Neighborhood Hits	177	Shared Neighborhood Hits	82
SwissProt Accessions	Q9UPW0, Q9NSS7	Gene names	FOXJ3, KIAA1041
Domain Architecture
Description	Forkhead box protein J3.

FOXJ3_MOUSE
θ value	1.73987e-27 (rank : 10)	NC score	0.941214 (rank : 50)
Query Neighborhood Hits	99	Target Neighborhood Hits	190	Shared Neighborhood Hits	81
SwissProt Accessions	Q8BUR3, Q3UTD8	Gene names	Foxj3, Kiaa1041
Domain Architecture
Description	Forkhead box protein J3.

FOXJ2_HUMAN
θ value	2.96777e-27 (rank : 11)	NC score	0.936619 (rank : 53)
Query Neighborhood Hits	99	Target Neighborhood Hits	239	Shared Neighborhood Hits	84
SwissProt Accessions	Q9P0K8, Q96PS9, Q9NSN5	Gene names	FOXJ2, FHX
Domain Architecture
Description	Forkhead box protein J2 (Fork head homologous X).

FREA_MOUSE
θ value	2.96777e-27 (rank : 12)	NC score	0.953574 (rank : 24)
Query Neighborhood Hits	99	Target Neighborhood Hits	147	Shared Neighborhood Hits	82
SwissProt Accessions	Q61574, Q8C5N7	Gene names	Fkhl18, Fkh3, Freac10
Domain Architecture	No domain graphic available
Description	Forkhead-related transcription factor 10 (FREAC-10) (Forkhead-like 18 protein) (Transcription factor FKH-3).

FOXK1_MOUSE
θ value	3.87602e-27 (rank : 13)	NC score	0.945293 (rank : 43)
Query Neighborhood Hits	99	Target Neighborhood Hits	215	Shared Neighborhood Hits	83
SwissProt Accessions	P42128, O35939	Gene names	Foxk1, Mnf
Domain Architecture
Description	Forkhead box protein K1 (Myocyte nuclear factor) (MNF).

FX4L1_HUMAN
θ value	5.06226e-27 (rank : 14)	NC score	0.950326 (rank : 31)
Query Neighborhood Hits	99	Target Neighborhood Hits	111	Shared Neighborhood Hits	81
SwissProt Accessions	Q9NU39	Gene names	FOXD4L1
Domain Architecture
Description	Forkhead box protein D4-like 1.

FOXD1_HUMAN
θ value	6.61148e-27 (rank : 15)	NC score	0.961095 (rank : 9)
Query Neighborhood Hits	99	Target Neighborhood Hits	122	Shared Neighborhood Hits	81
SwissProt Accessions	Q16676, Q12949	Gene names	FOXD1, FKHL8, FREAC4
Domain Architecture
Description	Forkhead box protein D1 (Forkhead-related protein FKHL8) (Forkhead- related transcription factor 4) (FREAC-4).

FX4L4_HUMAN
θ value	2.51237e-26 (rank : 16)	NC score	0.950037 (rank : 32)
Query Neighborhood Hits	99	Target Neighborhood Hits	101	Shared Neighborhood Hits	81
SwissProt Accessions	Q8WXT5	Gene names	FOXD4L4, FOXD4B
Domain Architecture
Description	Forkhead box protein D4-like 4 (Forkhead box protein D4B) (Myeloid factor-gamma).

FOXD4_HUMAN
θ value	3.28125e-26 (rank : 17)	NC score	0.947427 (rank : 42)
Query Neighborhood Hits	99	Target Neighborhood Hits	106	Shared Neighborhood Hits	81
SwissProt Accessions	Q12950, Q5VVK1, Q8WXT6	Gene names	FOXD4, FKHL9, FOXD4A, FREAC5
Domain Architecture
Description	Forkhead box protein D4 (Forkhead-related protein FKHL9) (Forkhead- related transcription factor 5) (FREAC-5) (Myeloid factor-alpha).

FOXE1_MOUSE
θ value	3.28125e-26 (rank : 18)	NC score	0.960256 (rank : 10)
Query Neighborhood Hits	99	Target Neighborhood Hits	91	Shared Neighborhood Hits	81
SwissProt Accessions	Q8R2I0	Gene names	Foxe1, Titf2
Domain Architecture
Description	Forkhead box protein E1 (Thyroid transcription factor 2) (TTF-2).

FOXE3_HUMAN
θ value	4.28545e-26 (rank : 19)	NC score	0.961963 (rank : 7)
Query Neighborhood Hits	99	Target Neighborhood Hits	112	Shared Neighborhood Hits	81
SwissProt Accessions	Q13461, Q5SVY9, Q9NQV9	Gene names	FOXE3, FKHL12, FREAC8
Domain Architecture
Description	Forkhead box protein E3 (Forkhead-related protein FKHL12) (Forkhead- related transcription factor 8) (FREAC-8).

FOXI1_HUMAN
θ value	4.28545e-26 (rank : 20)	NC score	0.956284 (rank : 17)
Query Neighborhood Hits	99	Target Neighborhood Hits	104	Shared Neighborhood Hits	82
SwissProt Accessions	Q12951, Q14518, Q66SR7, Q8N6L8	Gene names	FOXI1, FKHL10, FREAC6
Domain Architecture
Description	Forkhead box protein I1 (Forkhead-related protein FKHL10) (Forkhead- related transcription factor 6) (FREAC-6) (Hepatocyte nuclear factor 3 forkhead homolog 3) (HNF-3/fork-head homolog 3) (HFH-3).

FOXL1_MOUSE
θ value	5.59698e-26 (rank : 21)	NC score	0.958136 (rank : 13)
Query Neighborhood Hits	99	Target Neighborhood Hits	152	Shared Neighborhood Hits	81
SwissProt Accessions	Q64731	Gene names	Foxl1, Fkh6, Fkhl11
Domain Architecture
Description	Forkhead box protein L1 (Forkhead-related protein FKHL11) (Transcription factor FKH-6).

FOXD3_HUMAN
θ value	7.30988e-26 (rank : 22)	NC score	0.958838 (rank : 12)
Query Neighborhood Hits	99	Target Neighborhood Hits	100	Shared Neighborhood Hits	82
SwissProt Accessions	Q9UJU5, Q9BYM2, Q9UDD1	Gene names	FOXD3
Domain Architecture
Description	Forkhead box protein D3 (HNF3/FH transcription factor genesis).

FOXD3_MOUSE
θ value	7.30988e-26 (rank : 23)	NC score	0.956911 (rank : 15)
Query Neighborhood Hits	99	Target Neighborhood Hits	98	Shared Neighborhood Hits	81
SwissProt Accessions	Q61060	Gene names	Foxd3, Hfh2
Domain Architecture
Description	Forkhead box protein D3 (HNF3/FH transcription factor genesis) (Hepatocyte nuclear factor 3 forkhead homolog 2) (HFH-2).

FOXGA_HUMAN
θ value	1.24688e-25 (rank : 24)	NC score	0.951389 (rank : 27)
Query Neighborhood Hits	99	Target Neighborhood Hits	132	Shared Neighborhood Hits	82
SwissProt Accessions	P55316	Gene names	FOXG1A, FKHL2
Domain Architecture
Description	Forkhead box protein G1A (Forkhead-related protein FKHL2) (Transcription factor BF-2) (Brain factor 2) (BF2) (HFK2).

FOXC1_HUMAN
θ value	2.12685e-25 (rank : 25)	NC score	0.943272 (rank : 47)
Query Neighborhood Hits	99	Target Neighborhood Hits	208	Shared Neighborhood Hits	82
SwissProt Accessions	Q12948, Q86UP7, Q9BYM1, Q9NUE5, Q9UDD0, Q9UP06	Gene names	FOXC1, FKHL7, FREAC3
Domain Architecture
Description	Forkhead box protein C1 (Forkhead-related protein FKHL7) (Forkhead- related transcription factor 3) (FREAC-3).

FOXC1_MOUSE
θ value	2.12685e-25 (rank : 26)	NC score	0.943635 (rank : 46)
Query Neighborhood Hits	99	Target Neighborhood Hits	218	Shared Neighborhood Hits	83
SwissProt Accessions	Q61572, O88409, Q61582	Gene names	Foxc1, Fkh1, Fkhl7, Freac3, Mf1
Domain Architecture
Description	Forkhead box protein C1 (Forkhead-related protein FKHL7) (Forkhead- related transcription factor 3) (FREAC-3) (Transcription factor FKH-1) (Mesoderm/mesenchyme forkhead 1) (MF-1).

FOXE3_MOUSE
θ value	2.12685e-25 (rank : 27)	NC score	0.959924 (rank : 11)
Query Neighborhood Hits	99	Target Neighborhood Hits	118	Shared Neighborhood Hits	81
SwissProt Accessions	Q9QY14	Gene names	Foxe3
Domain Architecture
Description	Forkhead box protein E3.

FOXE1_HUMAN
θ value	2.77775e-25 (rank : 28)	NC score	0.957393 (rank : 14)
Query Neighborhood Hits	99	Target Neighborhood Hits	106	Shared Neighborhood Hits	81
SwissProt Accessions	O00358, O75765	Gene names	FOXE1, FKHL15, TITF2, TTF2
Domain Architecture
Description	Forkhead box protein E1 (Thyroid transcription factor 2) (TTF-2) (Forkhead-related protein FKHL15).

FOXB1_MOUSE
θ value	3.62785e-25 (rank : 29)	NC score	0.952669 (rank : 25)
Query Neighborhood Hits	99	Target Neighborhood Hits	125	Shared Neighborhood Hits	82
SwissProt Accessions	Q64732, O08753	Gene names	Foxb1, Fkh5, Foxb1a, Foxb1b, Mf3
Domain Architecture
Description	Forkhead box protein B1 (Transcription factor FKH-5).

FOXC2_HUMAN
θ value	4.73814e-25 (rank : 30)	NC score	0.941034 (rank : 51)
Query Neighborhood Hits	99	Target Neighborhood Hits	236	Shared Neighborhood Hits	82
SwissProt Accessions	Q99958	Gene names	FOXC2, FKHL14, MFH1
Domain Architecture
Description	Forkhead box protein C2 (Forkhead-related protein FKHL14) (Mesenchyme fork head protein 1) (MFH-1 protein) (Transcription factor FKH-14).

FOXC2_MOUSE
θ value	4.73814e-25 (rank : 31)	NC score	0.947770 (rank : 41)
Query Neighborhood Hits	99	Target Neighborhood Hits	124	Shared Neighborhood Hits	81
SwissProt Accessions	Q61850, P97948, Q63869, Q8C694	Gene names	Foxc2, Fkh14, Fkhl14, Mfh1
Domain Architecture
Description	Forkhead box protein C2 (Forkhead-related protein FKHL14) (Mesenchyme fork head protein 1) (MFH-1 protein) (Transcription factor FKH-14).

HNF3A_MOUSE
θ value	4.73814e-25 (rank : 32)	NC score	0.942546 (rank : 48)
Query Neighborhood Hits	99	Target Neighborhood Hits	140	Shared Neighborhood Hits	81
SwissProt Accessions	P35582, Q61108	Gene names	Foxa1, Hnf3a, Tcf-3a, Tcf3a
Domain Architecture
Description	Hepatocyte nuclear factor 3-alpha (HNF-3A) (Forkhead box protein A1).

FOXL1_HUMAN
θ value	6.18819e-25 (rank : 33)	NC score	0.961738 (rank : 8)
Query Neighborhood Hits	99	Target Neighborhood Hits	114	Shared Neighborhood Hits	81
SwissProt Accessions	Q12952, Q9H242	Gene names	FOXL1, FKHL11, FREAC7
Domain Architecture
Description	Forkhead box protein L1 (Forkhead-related protein FKHL11) (Forkhead- related transcription factor 7) (FREAC-7).

HNF3A_HUMAN
θ value	6.18819e-25 (rank : 34)	NC score	0.944412 (rank : 44)
Query Neighborhood Hits	99	Target Neighborhood Hits	119	Shared Neighborhood Hits	81
SwissProt Accessions	P55317, Q9H2A0	Gene names	FOXA1, HNF3A, TCF3A
Domain Architecture
Description	Hepatocyte nuclear factor 3-alpha (HNF-3A) (Forkhead box protein A1).

FOXI1_MOUSE
θ value	8.08199e-25 (rank : 35)	NC score	0.954387 (rank : 22)
Query Neighborhood Hits	99	Target Neighborhood Hits	118	Shared Neighborhood Hits	81
SwissProt Accessions	Q922I5, Q5SRI5, Q9D299	Gene names	Foxi1
Domain Architecture	No domain graphic available
Description	Forkhead box protein I1.

FOXI2_MOUSE
θ value	1.37858e-24 (rank : 36)	NC score	0.963492 (rank : 4)
Query Neighborhood Hits	99	Target Neighborhood Hits	89	Shared Neighborhood Hits	81
SwissProt Accessions	Q3I5G5, Q8BIK9	Gene names	Foxi2
Domain Architecture	No domain graphic available
Description	Forkhead box protein I2.

FOXD4_MOUSE
θ value	2.35151e-24 (rank : 37)	NC score	0.952257 (rank : 26)
Query Neighborhood Hits	99	Target Neighborhood Hits	98	Shared Neighborhood Hits	81
SwissProt Accessions	Q60688, Q61573	Gene names	Foxd4, Fkh2, Fkhl9, Freac5
Domain Architecture
Description	Forkhead box protein D4 (Forkhead-related protein FKHL9) (Forkhead- related transcription factor 5) (FREAC-5) (Transcription factor FKH- 2).

HNF3B_HUMAN
θ value	2.35151e-24 (rank : 38)	NC score	0.948556 (rank : 39)
Query Neighborhood Hits	99	Target Neighborhood Hits	106	Shared Neighborhood Hits	81
SwissProt Accessions	Q9Y261, Q8WUW4, Q96DF7	Gene names	FOXA2, HNF3B, TCF3B
Domain Architecture
Description	Hepatocyte nuclear factor 3-beta (HNF-3B) (Forkhead box protein A2).

HNF3B_MOUSE
θ value	2.35151e-24 (rank : 39)	NC score	0.948953 (rank : 36)
Query Neighborhood Hits	99	Target Neighborhood Hits	112	Shared Neighborhood Hits	81
SwissProt Accessions	P35583, Q60602	Gene names	Foxa2, Hnf3b, Tcf-3b, Tcf3b
Domain Architecture
Description	Hepatocyte nuclear factor 3-beta (HNF-3B) (Forkhead box protein A2).

HNF3G_HUMAN
θ value	3.07116e-24 (rank : 40)	NC score	0.955024 (rank : 20)
Query Neighborhood Hits	99	Target Neighborhood Hits	122	Shared Neighborhood Hits	82
SwissProt Accessions	P55318, Q9UMW9	Gene names	FOXA3, HNF3G, TCF3G
Domain Architecture
Description	Hepatocyte nuclear factor 3-gamma (HNF-3G) (Forkhead box protein A3) (Fork head-related protein FKH H3).

FOXGB_HUMAN
θ value	5.23862e-24 (rank : 41)	NC score	0.948435 (rank : 40)
Query Neighborhood Hits	99	Target Neighborhood Hits	123	Shared Neighborhood Hits	82
SwissProt Accessions	P55315	Gene names	FOXG1B, FKHL1
Domain Architecture
Description	Forkhead box protein G1B (Forkhead-related protein FKHL1) (Transcription factor BF-1) (Brain factor 1) (BF1) (HFK1).

FOXGB_MOUSE
θ value	5.23862e-24 (rank : 42)	NC score	0.949302 (rank : 35)
Query Neighborhood Hits	99	Target Neighborhood Hits	148	Shared Neighborhood Hits	82
SwissProt Accessions	Q60987, Q80VP3	Gene names	Foxg1b, Fkhl1, Foxg1, Hfhbf1
Domain Architecture
Description	Forkhead box protein G1B (Forkhead-related protein FKHL1) (Transcription factor BF-1) (Brain factor 1) (BF1).

FOXN3_HUMAN
θ value	5.23862e-24 (rank : 43)	NC score	0.930383 (rank : 55)
Query Neighborhood Hits	99	Target Neighborhood Hits	121	Shared Neighborhood Hits	81
SwissProt Accessions	O00409, Q96II7, Q9UIE7	Gene names	CHES1, FOXN3
Domain Architecture
Description	Checkpoint suppressor 1 (Forkhead box protein N3).

FOXB1_HUMAN
θ value	8.93572e-24 (rank : 44)	NC score	0.950905 (rank : 29)
Query Neighborhood Hits	99	Target Neighborhood Hits	121	Shared Neighborhood Hits	82
SwissProt Accessions	Q99853, O60652, O75917	Gene names	FOXB1, FKH5
Domain Architecture
Description	Forkhead box protein B1 (Transcription factor FKH-5).

HNF3G_MOUSE
θ value	8.93572e-24 (rank : 45)	NC score	0.953694 (rank : 23)
Query Neighborhood Hits	99	Target Neighborhood Hits	103	Shared Neighborhood Hits	82
SwissProt Accessions	P35584	Gene names	Foxa3, Hnf3g, Tcf-3g, Tcf3g
Domain Architecture
Description	Hepatocyte nuclear factor 3-gamma (HNF-3G) (Forkhead box protein A3).

FOXB2_MOUSE
θ value	1.16704e-23 (rank : 46)	NC score	0.955286 (rank : 19)
Query Neighborhood Hits	99	Target Neighborhood Hits	139	Shared Neighborhood Hits	82
SwissProt Accessions	Q64733	Gene names	Foxb2, Fkh4
Domain Architecture
Description	Forkhead box protein B2 (Transcription factor FKH-4).

FOXN3_MOUSE
θ value	1.5242e-23 (rank : 47)	NC score	0.931685 (rank : 54)
Query Neighborhood Hits	99	Target Neighborhood Hits	114	Shared Neighborhood Hits	81
SwissProt Accessions	Q499D0, Q8C5N8, Q9CU83	Gene names	Ches1, Foxn3
Domain Architecture	No domain graphic available
Description	Checkpoint suppressor 1 (Forkhead box protein N3).

FOXL2_MOUSE
θ value	2.59989e-23 (rank : 48)	NC score	0.954416 (rank : 21)
Query Neighborhood Hits	99	Target Neighborhood Hits	151	Shared Neighborhood Hits	81
SwissProt Accessions	O88470, Q8K3X9	Gene names	Foxl2, Pfrk
Domain Architecture	No domain graphic available
Description	Forkhead box protein L2 (Pituitary forkhead factor) (P-Frk).

FOXL2_HUMAN
θ value	7.56453e-23 (rank : 49)	NC score	0.955729 (rank : 18)
Query Neighborhood Hits	99	Target Neighborhood Hits	142	Shared Neighborhood Hits	81
SwissProt Accessions	P58012, Q4ZGJ3	Gene names	FOXL2
Domain Architecture
Description	Forkhead box protein L2.

FOXF1_MOUSE
θ value	3.75424e-22 (rank : 50)	NC score	0.950734 (rank : 30)
Query Neighborhood Hits	99	Target Neighborhood Hits	86	Shared Neighborhood Hits	81
SwissProt Accessions	Q61080, Q61661	Gene names	Foxf1, Fkhl5, Foxf1a, Freac1, Hfh8
Domain Architecture
Description	Forkhead box protein F1 (Forkhead-related protein FKHL5) (Forkhead- related transcription factor 1) (FREAC-1) (Hepatocyte nuclear factor 3 forkhead homolog 8) (HFH-8).

FOXF2_HUMAN
θ value	3.75424e-22 (rank : 51)	NC score	0.956714 (rank : 16)
Query Neighborhood Hits	99	Target Neighborhood Hits	115	Shared Neighborhood Hits	81
SwissProt Accessions	Q12947, Q9UQ85	Gene names	FOXF2, FKHL6, FREAC2
Domain Architecture
Description	Forkhead box protein F2 (Forkhead-related protein FKHL6) (Forkhead- related transcription factor 2) (FREAC-2) (Forkhead-related activator 2).

FOXF1_HUMAN
θ value	6.40375e-22 (rank : 52)	NC score	0.948692 (rank : 38)
Query Neighborhood Hits	99	Target Neighborhood Hits	106	Shared Neighborhood Hits	81
SwissProt Accessions	Q12946, Q5FWE5	Gene names	FOXF1, FKHL5, FREAC1
Domain Architecture
Description	Forkhead box protein F1 (Forkhead-related protein FKHL5) (Forkhead- related transcription factor 1) (FREAC-1) (Forkhead-related activator 1).

FOXE2_HUMAN
θ value	2.97466e-19 (rank : 53)	NC score	0.924687 (rank : 56)
Query Neighborhood Hits	99	Target Neighborhood Hits	236	Shared Neighborhood Hits	82
SwissProt Accessions	Q99526	Gene names	FOXE2
Domain Architecture
Description	Forkhead box protein E2 (HNF-3/fork head-like protein 5) (HFKL5) (HFKH4).

FOXQ1_MOUSE
θ value	1.13037e-18 (rank : 54)	NC score	0.949500 (rank : 34)
Query Neighborhood Hits	99	Target Neighborhood Hits	96	Shared Neighborhood Hits	81
SwissProt Accessions	O70220	Gene names	Foxq1, Hfh1, Hfh1l
Domain Architecture
Description	Forkhead box protein Q1 (Hepatocyte nuclear factor 3 forkhead homolog 1) (HNF-3/forkhead-like protein 1) (HFH-1) (HFH-1l).

FOXN2_HUMAN
θ value	1.92812e-18 (rank : 55)	NC score	0.940910 (rank : 52)
Query Neighborhood Hits	99	Target Neighborhood Hits	85	Shared Neighborhood Hits	81
SwissProt Accessions	P32314, Q15769	Gene names	FOXN2, HTLF
Domain Architecture
Description	Forkhead box protein N2 (Human T-cell leukemia virus enhancer factor).

FOXQ1_HUMAN
θ value	3.28887e-18 (rank : 56)	NC score	0.950001 (rank : 33)
Query Neighborhood Hits	99	Target Neighborhood Hits	115	Shared Neighborhood Hits	81
SwissProt Accessions	Q9C009, Q9NS06	Gene names	FOXQ1, HFH1
Domain Architecture
Description	Forkhead box protein Q1 (Hepatocyte nuclear factor 3 forkhead homolog 1) (HNF-3/forkhead-like protein 1) (HFH-1).

FOXP4_HUMAN
θ value	4.29542e-18 (rank : 57)	NC score	0.846113 (rank : 70)
Query Neighborhood Hits	99	Target Neighborhood Hits	246	Shared Neighborhood Hits	83
SwissProt Accessions	Q8IVH2, Q96E19	Gene names	FOXP4, FKHLA
Domain Architecture
Description	Forkhead box protein P4 (Fork head-related protein-like A).

FOXP4_MOUSE
θ value	1.24977e-17 (rank : 58)	NC score	0.850377 (rank : 68)
Query Neighborhood Hits	99	Target Neighborhood Hits	211	Shared Neighborhood Hits	83
SwissProt Accessions	Q9DBY0, Q80V92, Q8CG10, Q8CIS1	Gene names	Foxp4
Domain Architecture	No domain graphic available
Description	Forkhead box protein P4 (Fork head-related protein like A) (mFKHLA).

FOXP2_HUMAN
θ value	4.74913e-17 (rank : 59)	NC score	0.808716 (rank : 78)
Query Neighborhood Hits	99	Target Neighborhood Hits	366	Shared Neighborhood Hits	82
SwissProt Accessions	O15409, Q6ZND1, Q75MJ3, Q8IZE0, Q8N0W2, Q8N6B7, Q8N6B8, Q8NFQ1, Q8NFQ2, Q8NFQ3, Q8NFQ4, Q8TD74	Gene names	FOXP2, CAGH44, TNRC10
Domain Architecture
Description	Forkhead box protein P2 (CAG repeat protein 44) (Trinucleotide repeat- containing gene 10 protein).

FOXP2_MOUSE
θ value	4.74913e-17 (rank : 60)	NC score	0.806256 (rank : 80)
Query Neighborhood Hits	99	Target Neighborhood Hits	366	Shared Neighborhood Hits	82
SwissProt Accessions	P58463, Q6PD37, Q8C4F0, Q8R441	Gene names	Foxp2
Domain Architecture
Description	Forkhead box protein P2.

FOXN1_MOUSE
θ value	8.10077e-17 (rank : 61)	NC score	0.865627 (rank : 65)
Query Neighborhood Hits	99	Target Neighborhood Hits	300	Shared Neighborhood Hits	84
SwissProt Accessions	Q61575	Gene names	Foxn1, Fkh19, Hfh11, Whn
Domain Architecture
Description	Forkhead box protein N1 (Transcription factor winged-helix nude) (Hepatocyte nuclear factor 3 forkhead homolog 11) (HNF-3/forkhead homolog 11) (HFH-11).

FOXP1_HUMAN
θ value	8.10077e-17 (rank : 62)	NC score	0.851760 (rank : 67)
Query Neighborhood Hits	99	Target Neighborhood Hits	168	Shared Neighborhood Hits	82
SwissProt Accessions	Q9H334, Q9H332, Q9H333, Q9P0R1	Gene names	FOXP1
Domain Architecture
Description	Forkhead box protein P1.

FOXP1_MOUSE
θ value	8.10077e-17 (rank : 63)	NC score	0.842476 (rank : 72)
Query Neighborhood Hits	99	Target Neighborhood Hits	241	Shared Neighborhood Hits	82
SwissProt Accessions	P58462	Gene names	Foxp1
Domain Architecture
Description	Forkhead box protein P1 (Forkhead-related transcription factor 1).

FOXN1_HUMAN
θ value	1.058e-16 (rank : 64)	NC score	0.856057 (rank : 66)
Query Neighborhood Hits	99	Target Neighborhood Hits	377	Shared Neighborhood Hits	86
SwissProt Accessions	O15353, O15352	Gene names	FOXN1, WHN
Domain Architecture
Description	Forkhead box protein N1 (Transcription factor winged-helix nude).

FOXN4_HUMAN
θ value	1.38178e-16 (rank : 65)	NC score	0.874655 (rank : 64)
Query Neighborhood Hits	99	Target Neighborhood Hits	248	Shared Neighborhood Hits	84
SwissProt Accessions	Q96NZ1, Q6ZMR4, Q96NZ0	Gene names	FOXN4
Domain Architecture	No domain graphic available
Description	Forkhead box protein N4.

FOXN4_MOUSE
θ value	5.25075e-16 (rank : 66)	NC score	0.883522 (rank : 60)
Query Neighborhood Hits	99	Target Neighborhood Hits	154	Shared Neighborhood Hits	81
SwissProt Accessions	Q8K3Q3, Q920C0	Gene names	Foxn4
Domain Architecture
Description	Forkhead box protein N4.

FOXP3_MOUSE
θ value	5.25075e-16 (rank : 67)	NC score	0.879474 (rank : 62)
Query Neighborhood Hits	99	Target Neighborhood Hits	117	Shared Neighborhood Hits	81
SwissProt Accessions	Q99JB6	Gene names	Foxp3
Domain Architecture
Description	Forkhead box protein P3 (Scurfin).

FOXH1_HUMAN
θ value	8.95645e-16 (rank : 68)	NC score	0.912235 (rank : 58)
Query Neighborhood Hits	99	Target Neighborhood Hits	258	Shared Neighborhood Hits	84
SwissProt Accessions	O75593	Gene names	FOXH1, FAST1, FAST2
Domain Architecture
Description	Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (hFAST-1) (Forkhead activin signal transducer 2) (Fast-2).

FOXP3_HUMAN
θ value	1.99529e-15 (rank : 69)	NC score	0.880203 (rank : 61)
Query Neighborhood Hits	99	Target Neighborhood Hits	105	Shared Neighborhood Hits	81
SwissProt Accessions	Q9BZS1, O60827, Q4ZH51	Gene names	FOXP3, IPEX
Domain Architecture
Description	Forkhead box protein P3 (Scurfin).

FOXM1_HUMAN
θ value	2.60593e-15 (rank : 70)	NC score	0.879106 (rank : 63)
Query Neighborhood Hits	99	Target Neighborhood Hits	167	Shared Neighborhood Hits	82
SwissProt Accessions	Q08050, O43258, O43259, O43260, Q4ZGG7, Q9BRL2	Gene names	FOXM1, FKHL16, HFH11, MPP2, WIN
Domain Architecture
Description	Forkhead box protein M1 (Forkhead-related protein FKHL16) (Hepatocyte nuclear factor 3 forkhead homolog 11) (HNF-3/fork-head homolog 11) (HFH-11) (Winged helix factor from INS-1 cells) (M-phase phosphoprotein 2) (MPM-2 reactive phosphoprotein 2) (Transcription factor Trident).

FOXM1_MOUSE
θ value	4.44505e-15 (rank : 71)	NC score	0.888536 (rank : 59)
Query Neighborhood Hits	99	Target Neighborhood Hits	134	Shared Neighborhood Hits	82
SwissProt Accessions	O08696	Gene names	Foxm1, Fkh16
Domain Architecture
Description	Forkhead box protein M1 (Forkhead homolog 16) (Winged-helix transcription factor Trident).

FOXH1_MOUSE
θ value	2.88119e-14 (rank : 72)	NC score	0.916986 (rank : 57)
Query Neighborhood Hits	99	Target Neighborhood Hits	118	Shared Neighborhood Hits	82
SwissProt Accessions	O88621, Q9QZL5, Q9R241	Gene names	Foxh1, Fast1, Fast2
Domain Architecture
Description	Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (Forkhead activin signal transducer 2) (Fast-2).

FOXO4_HUMAN
θ value	2.0648e-12 (rank : 73)	NC score	0.848717 (rank : 69)
Query Neighborhood Hits	99	Target Neighborhood Hits	197	Shared Neighborhood Hits	83
SwissProt Accessions	P98177, O43821, Q13720, Q3KPF1, Q8TDK9	Gene names	MLLT7, AFX, AFX1, FOXO4
Domain Architecture
Description	Fork head domain transcription factor AFX1 (Forkhead box protein O4).

FOXO1_HUMAN
θ value	2.98157e-11 (rank : 74)	NC score	0.827301 (rank : 76)
Query Neighborhood Hits	99	Target Neighborhood Hits	126	Shared Neighborhood Hits	83
SwissProt Accessions	Q12778, O43523, Q5VYC7, Q6NSK6	Gene names	FOXO1A, FKHR
Domain Architecture
Description	Forkhead box protein O1A (Forkhead in rhabdomyosarcoma).

FOXO1_MOUSE
θ value	3.89403e-11 (rank : 75)	NC score	0.827072 (rank : 77)
Query Neighborhood Hits	99	Target Neighborhood Hits	118	Shared Neighborhood Hits	82
SwissProt Accessions	Q9R1E0	Gene names	Foxo1a, Fkhr, Foxo1
Domain Architecture
Description	Forkhead box protein O1A (Forkhead in rhabdomyosarcoma).

FOXO4_MOUSE
θ value	4.30538e-10 (rank : 76)	NC score	0.841843 (rank : 74)
Query Neighborhood Hits	99	Target Neighborhood Hits	168	Shared Neighborhood Hits	82
SwissProt Accessions	Q9WVH3	Gene names	Mllt7, Afx, Afx1, Fkhr3, Foxo4
Domain Architecture
Description	Fork head domain transcription factor AFX1 (Afxh) (Forkhead box protein O4).

FOXO3_HUMAN
θ value	2.79066e-09 (rank : 77)	NC score	0.842887 (rank : 71)
Query Neighborhood Hits	99	Target Neighborhood Hits	105	Shared Neighborhood Hits	81
SwissProt Accessions	O43524, O15171, Q5T2I7, Q9BZ04	Gene names	FOXO3A, FKHRL1
Domain Architecture
Description	Forkhead box protein O3A (Forkhead in rhabdomyosarcoma-like 1) (AF6q21 protein).

FOXR2_MOUSE
θ value	4.76016e-09 (rank : 78)	NC score	0.841974 (rank : 73)
Query Neighborhood Hits	99	Target Neighborhood Hits	88	Shared Neighborhood Hits	81
SwissProt Accessions	Q3UM89	Gene names	Foxr2, Foxn6
Domain Architecture	No domain graphic available
Description	Forkhead box protein R2 (Forkhead box protein N6).

FOXR1_MOUSE
θ value	1.17247e-07 (rank : 79)	NC score	0.837027 (rank : 75)
Query Neighborhood Hits	99	Target Neighborhood Hits	84	Shared Neighborhood Hits	81
SwissProt Accessions	Q3UTB7	Gene names	Foxr1, Foxn5
Domain Architecture	No domain graphic available
Description	Forkhead box protein R1 (Forkhead box protein N5).

FOXR1_HUMAN
θ value	2.21117e-06 (rank : 80)	NC score	0.807928 (rank : 79)
Query Neighborhood Hits	99	Target Neighborhood Hits	85	Shared Neighborhood Hits	81
SwissProt Accessions	Q6PIV2, Q86UT9, Q8IXX2	Gene names	FOXR1, DLNB13, FOXN5
Domain Architecture	No domain graphic available
Description	Forkhead box protein R1 (Forkhead box protein N5).

FOXR2_HUMAN
θ value	0.0148317 (rank : 81)	NC score	0.698252 (rank : 81)
Query Neighborhood Hits	99	Target Neighborhood Hits	97	Shared Neighborhood Hits	81
SwissProt Accessions	Q6PJQ5	Gene names	FOXR2, FOXN6
Domain Architecture	No domain graphic available
Description	Forkhead box protein R2 (Forkhead box protein N6).

MBD5_HUMAN
θ value	0.0961366 (rank : 82)	NC score	0.030852 (rank : 83)
Query Neighborhood Hits	99	Target Neighborhood Hits	176	Shared Neighborhood Hits	5
SwissProt Accessions	Q9P267, Q9NUV6	Gene names	MBD5, KIAA1461
Domain Architecture	No domain graphic available
Description	Methyl-CpG-binding domain protein 5 (Methyl-CpG-binding protein MBD5).

RGS3_HUMAN
θ value	0.279714 (rank : 83)	NC score	0.014256 (rank : 87)
Query Neighborhood Hits	99	Target Neighborhood Hits	1375	Shared Neighborhood Hits	15
SwissProt Accessions	P49796, Q5VXC1, Q5VZ05, Q6ZRM5, Q8IUQ1, Q8NC47, Q8NFN4, Q8NFN5, Q8TD59, Q8TD68, Q8WXA0	Gene names	RGS3
Domain Architecture
Description	Regulator of G-protein signaling 3 (RGS3) (RGP3).

DBPA_HUMAN
θ value	1.38821 (rank : 84)	NC score	0.020269 (rank : 84)
Query Neighborhood Hits	99	Target Neighborhood Hits	52	Shared Neighborhood Hits	4
SwissProt Accessions	P16989, Q14121, Q969N6	Gene names	CSDA, DBPA
Domain Architecture
Description	DNA-binding protein A (Cold shock domain-containing protein A) (Single-strand DNA-binding protein NF-GMB).

MLL3_HUMAN
θ value	3.0926 (rank : 85)	NC score	0.011431 (rank : 89)
Query Neighborhood Hits	99	Target Neighborhood Hits	1644	Shared Neighborhood Hits	25
SwissProt Accessions	Q8NEZ4, Q8NC02, Q8NDF6, Q9H9P4, Q9NR13, Q9P222, Q9UDR7	Gene names	MLL3, HALR, KIAA1506
Domain Architecture
Description	Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog (EC 2.1.1.43) (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (Homologous to ALR protein).

PCDGK_HUMAN
θ value	3.0926 (rank : 86)	NC score	-0.000828 (rank : 98)
Query Neighborhood Hits	99	Target Neighborhood Hits	162	Shared Neighborhood Hits	3
SwissProt Accessions	Q9UN70, O60622, Q08192, Q9Y5C4	Gene names	PCDHGC3, PCDH2
Domain Architecture
Description	Protocadherin gamma C3 precursor (PCDH-gamma-C3) (Protocadherin 43) (PC-43) (Protocadherin 2).

PRR12_HUMAN
θ value	3.0926 (rank : 87)	NC score	0.034438 (rank : 82)
Query Neighborhood Hits	99	Target Neighborhood Hits	460	Shared Neighborhood Hits	12
SwissProt Accessions	Q9ULL5, Q8N4J6	Gene names	PRR12, KIAA1205
Domain Architecture	No domain graphic available
Description	Proline-rich protein 12.

SMAD9_MOUSE
θ value	4.03905 (rank : 88)	NC score	0.004052 (rank : 94)
Query Neighborhood Hits	99	Target Neighborhood Hits	75	Shared Neighborhood Hits	3
SwissProt Accessions	Q9JIW5, Q8CFF9	Gene names	Smad9, Madh8, Madh9, Smad8
Domain Architecture
Description	Mothers against decapentaplegic homolog 9 (SMAD 9) (Mothers against DPP homolog 9) (Smad9) (Smad8).

CSKI1_MOUSE
θ value	5.27518 (rank : 89)	NC score	0.000580 (rank : 96)
Query Neighborhood Hits	99	Target Neighborhood Hits	1031	Shared Neighborhood Hits	14
SwissProt Accessions	Q6P9K8, Q6ZPU2, Q8BWU2, Q8BX99, Q9CXH0	Gene names	Caskin1, Kiaa1306
Domain Architecture	No domain graphic available
Description	Caskin-1 (CASK-interacting protein 1).

MUC5B_HUMAN
θ value	5.27518 (rank : 90)	NC score	0.008504 (rank : 92)
Query Neighborhood Hits	99	Target Neighborhood Hits	1020	Shared Neighborhood Hits	14
SwissProt Accessions	Q9HC84, O00447, O00573, O14985, O15494, O95291, O95451, Q14881, Q99552, Q9UE28	Gene names	MUC5B, MUC5
Domain Architecture
Description	Mucin-5B precursor (Mucin-5 subtype B, tracheobronchial) (High molecular weight salivary mucin MG1) (Sublingual gland mucin).

BAT3_HUMAN
θ value	6.88961 (rank : 91)	NC score	0.015159 (rank : 86)
Query Neighborhood Hits	99	Target Neighborhood Hits	490	Shared Neighborhood Hits	13
SwissProt Accessions	P46379, O95874, Q5SQ35, Q5SQ36, Q5SQ37, Q5SRP8, Q96SA6, Q9BCN4	Gene names	BAT3, G3
Domain Architecture
Description	Large proline-rich protein BAT3 (HLA-B-associated transcript 3) (Protein G3).

FGF21_HUMAN
θ value	6.88961 (rank : 92)	NC score	0.004075 (rank : 93)
Query Neighborhood Hits	99	Target Neighborhood Hits	50	Shared Neighborhood Hits	3
SwissProt Accessions	Q9NSA1	Gene names	FGF21
Domain Architecture
Description	Fibroblast growth factor 21 precursor (FGF-21).

FMNL_HUMAN
θ value	6.88961 (rank : 93)	NC score	0.010410 (rank : 91)
Query Neighborhood Hits	99	Target Neighborhood Hits	529	Shared Neighborhood Hits	13
SwissProt Accessions	O95466, Q6DKG5, Q6IBP3, Q86UH1, Q8N671, Q8TDH1, Q96H10	Gene names	FMNL1, C17orf1, C17orf1B, FMNL
Domain Architecture
Description	Formin-like protein 1 (Leukocyte formin) (CLL-associated antigen KW- 13).

PB1_HUMAN
θ value	6.88961 (rank : 94)	NC score	0.015668 (rank : 85)
Query Neighborhood Hits	99	Target Neighborhood Hits	261	Shared Neighborhood Hits	5
SwissProt Accessions	Q86U86, Q9H2T3, Q9H2T4, Q9H2T5, Q9H301, Q9H314	Gene names	PB1
Domain Architecture	No domain graphic available
Description	Protein polybromo-1 (hPB1) (Polybromo-1D) (BRG1-associated factor 180) (BAF180).

CK056_HUMAN
θ value	8.99809 (rank : 95)	NC score	0.011074 (rank : 90)
Query Neighborhood Hits	99	Target Neighborhood Hits	42	Shared Neighborhood Hits	3
SwissProt Accessions	Q8N612, Q9C0A4, Q9H0N3, Q9H624	Gene names	C11orf56, KIAA1759
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C11orf56.

DBPA_MOUSE
θ value	8.99809 (rank : 96)	NC score	0.013494 (rank : 88)
Query Neighborhood Hits	99	Target Neighborhood Hits	64	Shared Neighborhood Hits	5
SwissProt Accessions	Q9JKB3, Q80WG4, Q9EQF7, Q9EQF8	Gene names	Csda, Msy4, Ybx3
Domain Architecture	No domain graphic available
Description	DNA-binding protein A (Cold shock domain-containing protein A) (Y-box protein 3).

EFNB3_HUMAN
θ value	8.99809 (rank : 97)	NC score	0.003334 (rank : 95)
Query Neighborhood Hits	99	Target Neighborhood Hits	48	Shared Neighborhood Hits	3
SwissProt Accessions	Q15768, O00680, Q8TBH7, Q92875	Gene names	EFNB3, EPLG8, LERK8
Domain Architecture
Description	Ephrin-B3 precursor (EPH-related receptor tyrosine kinase ligand 8) (LERK-8) (EPH-related receptor transmembrane ligand ELK-L3).

KCNQ5_HUMAN
θ value	8.99809 (rank : 98)	NC score	0.000460 (rank : 97)
Query Neighborhood Hits	99	Target Neighborhood Hits	163	Shared Neighborhood Hits	2
SwissProt Accessions	Q9NR82, Q9NRN0, Q9NYA6	Gene names	KCNQ5
Domain Architecture
Description	Potassium voltage-gated channel subfamily KQT member 5 (Voltage-gated potassium channel subunit Kv7.5) (Potassium channel subunit alpha KvLQT5) (KQT-like 5).

PKHA6_MOUSE
θ value	8.99809 (rank : 99)	NC score	-0.000935 (rank : 99)
Query Neighborhood Hits	99	Target Neighborhood Hits	591	Shared Neighborhood Hits	3
SwissProt Accessions	Q7TQG1, Q8K0J5	Gene names	Plekha6, Pepp3
Domain Architecture
Description	Pleckstrin homology domain-containing family A member 6 (Phosphoinositol 3-phosphate-binding protein 3) (PEPP-3).

Hits sorted by NC score

FOXJ1_HUMAN
NC score	0.999962 (rank : 1)	θ value	0 (rank : 1)
Query Neighborhood Hits	99	Target Neighborhood Hits	99	Shared Neighborhood Hits	99
SwissProt Accessions	Q92949, O00630	Gene names	FOXJ1, FKHL13, HFH4
Domain Architecture
Description	Forkhead box protein J1 (Forkhead-related protein FKHL13) (Hepatocyte nuclear factor 3 forkhead homolog 4) (HFH-4).

FOXJ1_MOUSE
NC score	0.990089 (rank : 2)	θ value	0 (rank : 2)
Query Neighborhood Hits	99	Target Neighborhood Hits	209	Shared Neighborhood Hits	90
SwissProt Accessions	Q61660	Gene names	Foxj1, Fkhl13, Hfh4
Domain Architecture
Description	Forkhead box protein J1 (Forkhead-related protein FKHL13) (Hepatocyte nuclear factor 3 forkhead homolog 4) (HFH-4).

FOXD1_MOUSE
NC score	0.964720 (rank : 3)	θ value	4.57862e-28 (rank : 6)
Query Neighborhood Hits	99	Target Neighborhood Hits	111	Shared Neighborhood Hits	81
SwissProt Accessions	Q61345	Gene names	Foxd1, Fkhl8, Freac4, Hfhbf2
Domain Architecture
Description	Forkhead box protein D1 (Forkhead-related protein FKHL8) (Forkhead- related transcription factor 4) (FREAC-4) (Brain factor 2) (HFH-BF-2).

FOXI2_MOUSE
NC score	0.963492 (rank : 4)	θ value	1.37858e-24 (rank : 36)
Query Neighborhood Hits	99	Target Neighborhood Hits	89	Shared Neighborhood Hits	81
SwissProt Accessions	Q3I5G5, Q8BIK9	Gene names	Foxi2
Domain Architecture	No domain graphic available
Description	Forkhead box protein I2.

FOXD2_HUMAN
NC score	0.962974 (rank : 5)	θ value	4.14116e-29 (rank : 3)
Query Neighborhood Hits	99	Target Neighborhood Hits	143	Shared Neighborhood Hits	81
SwissProt Accessions	O60548	Gene names	FOXD2, FKHL17, FREAC9
Domain Architecture
Description	Forkhead box protein D2 (Forkhead-related protein FKHL17) (Forkhead- related transcription factor 9) (FREAC-9).

FOXD2_MOUSE
NC score	0.962660 (rank : 6)	θ value	4.14116e-29 (rank : 4)
Query Neighborhood Hits	99	Target Neighborhood Hits	130	Shared Neighborhood Hits	81
SwissProt Accessions	O35392	Gene names	Foxd2, Mf2
Domain Architecture
Description	Forkhead box protein D2 (Mesoderm/mesenchyme forkhead 2) (MF-2).

FOXE3_HUMAN
NC score	0.961963 (rank : 7)	θ value	4.28545e-26 (rank : 19)
Query Neighborhood Hits	99	Target Neighborhood Hits	112	Shared Neighborhood Hits	81
SwissProt Accessions	Q13461, Q5SVY9, Q9NQV9	Gene names	FOXE3, FKHL12, FREAC8
Domain Architecture
Description	Forkhead box protein E3 (Forkhead-related protein FKHL12) (Forkhead- related transcription factor 8) (FREAC-8).

FOXL1_HUMAN
NC score	0.961738 (rank : 8)	θ value	6.18819e-25 (rank : 33)
Query Neighborhood Hits	99	Target Neighborhood Hits	114	Shared Neighborhood Hits	81
SwissProt Accessions	Q12952, Q9H242	Gene names	FOXL1, FKHL11, FREAC7
Domain Architecture
Description	Forkhead box protein L1 (Forkhead-related protein FKHL11) (Forkhead- related transcription factor 7) (FREAC-7).

FOXD1_HUMAN
NC score	0.961095 (rank : 9)	θ value	6.61148e-27 (rank : 15)
Query Neighborhood Hits	99	Target Neighborhood Hits	122	Shared Neighborhood Hits	81
SwissProt Accessions	Q16676, Q12949	Gene names	FOXD1, FKHL8, FREAC4
Domain Architecture
Description	Forkhead box protein D1 (Forkhead-related protein FKHL8) (Forkhead- related transcription factor 4) (FREAC-4).

FOXE1_MOUSE
NC score	0.960256 (rank : 10)	θ value	3.28125e-26 (rank : 18)
Query Neighborhood Hits	99	Target Neighborhood Hits	91	Shared Neighborhood Hits	81
SwissProt Accessions	Q8R2I0	Gene names	Foxe1, Titf2
Domain Architecture
Description	Forkhead box protein E1 (Thyroid transcription factor 2) (TTF-2).

FOXE3_MOUSE
NC score	0.959924 (rank : 11)	θ value	2.12685e-25 (rank : 27)
Query Neighborhood Hits	99	Target Neighborhood Hits	118	Shared Neighborhood Hits	81
SwissProt Accessions	Q9QY14	Gene names	Foxe3
Domain Architecture
Description	Forkhead box protein E3.

FOXD3_HUMAN
NC score	0.958838 (rank : 12)	θ value	7.30988e-26 (rank : 22)
Query Neighborhood Hits	99	Target Neighborhood Hits	100	Shared Neighborhood Hits	82
SwissProt Accessions	Q9UJU5, Q9BYM2, Q9UDD1	Gene names	FOXD3
Domain Architecture
Description	Forkhead box protein D3 (HNF3/FH transcription factor genesis).

FOXL1_MOUSE
NC score	0.958136 (rank : 13)	θ value	5.59698e-26 (rank : 21)
Query Neighborhood Hits	99	Target Neighborhood Hits	152	Shared Neighborhood Hits	81
SwissProt Accessions	Q64731	Gene names	Foxl1, Fkh6, Fkhl11
Domain Architecture
Description	Forkhead box protein L1 (Forkhead-related protein FKHL11) (Transcription factor FKH-6).

FOXE1_HUMAN
NC score	0.957393 (rank : 14)	θ value	2.77775e-25 (rank : 28)
Query Neighborhood Hits	99	Target Neighborhood Hits	106	Shared Neighborhood Hits	81
SwissProt Accessions	O00358, O75765	Gene names	FOXE1, FKHL15, TITF2, TTF2
Domain Architecture
Description	Forkhead box protein E1 (Thyroid transcription factor 2) (TTF-2) (Forkhead-related protein FKHL15).

FOXD3_MOUSE
NC score	0.956911 (rank : 15)	θ value	7.30988e-26 (rank : 23)
Query Neighborhood Hits	99	Target Neighborhood Hits	98	Shared Neighborhood Hits	81
SwissProt Accessions	Q61060	Gene names	Foxd3, Hfh2
Domain Architecture
Description	Forkhead box protein D3 (HNF3/FH transcription factor genesis) (Hepatocyte nuclear factor 3 forkhead homolog 2) (HFH-2).

FOXF2_HUMAN
NC score	0.956714 (rank : 16)	θ value	3.75424e-22 (rank : 51)
Query Neighborhood Hits	99	Target Neighborhood Hits	115	Shared Neighborhood Hits	81
SwissProt Accessions	Q12947, Q9UQ85	Gene names	FOXF2, FKHL6, FREAC2
Domain Architecture
Description	Forkhead box protein F2 (Forkhead-related protein FKHL6) (Forkhead- related transcription factor 2) (FREAC-2) (Forkhead-related activator 2).

FOXI1_HUMAN
NC score	0.956284 (rank : 17)	θ value	4.28545e-26 (rank : 20)
Query Neighborhood Hits	99	Target Neighborhood Hits	104	Shared Neighborhood Hits	82
SwissProt Accessions	Q12951, Q14518, Q66SR7, Q8N6L8	Gene names	FOXI1, FKHL10, FREAC6
Domain Architecture
Description	Forkhead box protein I1 (Forkhead-related protein FKHL10) (Forkhead- related transcription factor 6) (FREAC-6) (Hepatocyte nuclear factor 3 forkhead homolog 3) (HNF-3/fork-head homolog 3) (HFH-3).

FOXL2_HUMAN
NC score	0.955729 (rank : 18)	θ value	7.56453e-23 (rank : 49)
Query Neighborhood Hits	99	Target Neighborhood Hits	142	Shared Neighborhood Hits	81
SwissProt Accessions	P58012, Q4ZGJ3	Gene names	FOXL2
Domain Architecture
Description	Forkhead box protein L2.

FOXB2_MOUSE
NC score	0.955286 (rank : 19)	θ value	1.16704e-23 (rank : 46)
Query Neighborhood Hits	99	Target Neighborhood Hits	139	Shared Neighborhood Hits	82
SwissProt Accessions	Q64733	Gene names	Foxb2, Fkh4
Domain Architecture
Description	Forkhead box protein B2 (Transcription factor FKH-4).

HNF3G_HUMAN
NC score	0.955024 (rank : 20)	θ value	3.07116e-24 (rank : 40)
Query Neighborhood Hits	99	Target Neighborhood Hits	122	Shared Neighborhood Hits	82
SwissProt Accessions	P55318, Q9UMW9	Gene names	FOXA3, HNF3G, TCF3G
Domain Architecture
Description	Hepatocyte nuclear factor 3-gamma (HNF-3G) (Forkhead box protein A3) (Fork head-related protein FKH H3).

FOXL2_MOUSE
NC score	0.954416 (rank : 21)	θ value	2.59989e-23 (rank : 48)
Query Neighborhood Hits	99	Target Neighborhood Hits	151	Shared Neighborhood Hits	81
SwissProt Accessions	O88470, Q8K3X9	Gene names	Foxl2, Pfrk
Domain Architecture	No domain graphic available
Description	Forkhead box protein L2 (Pituitary forkhead factor) (P-Frk).

FOXI1_MOUSE
NC score	0.954387 (rank : 22)	θ value	8.08199e-25 (rank : 35)
Query Neighborhood Hits	99	Target Neighborhood Hits	118	Shared Neighborhood Hits	81
SwissProt Accessions	Q922I5, Q5SRI5, Q9D299	Gene names	Foxi1
Domain Architecture	No domain graphic available
Description	Forkhead box protein I1.

HNF3G_MOUSE
NC score	0.953694 (rank : 23)	θ value	8.93572e-24 (rank : 45)
Query Neighborhood Hits	99	Target Neighborhood Hits	103	Shared Neighborhood Hits	82
SwissProt Accessions	P35584	Gene names	Foxa3, Hnf3g, Tcf-3g, Tcf3g
Domain Architecture
Description	Hepatocyte nuclear factor 3-gamma (HNF-3G) (Forkhead box protein A3).

FREA_MOUSE
NC score	0.953574 (rank : 24)	θ value	2.96777e-27 (rank : 12)
Query Neighborhood Hits	99	Target Neighborhood Hits	147	Shared Neighborhood Hits	82
SwissProt Accessions	Q61574, Q8C5N7	Gene names	Fkhl18, Fkh3, Freac10
Domain Architecture	No domain graphic available
Description	Forkhead-related transcription factor 10 (FREAC-10) (Forkhead-like 18 protein) (Transcription factor FKH-3).

FOXB1_MOUSE
NC score	0.952669 (rank : 25)	θ value	3.62785e-25 (rank : 29)
Query Neighborhood Hits	99	Target Neighborhood Hits	125	Shared Neighborhood Hits	82
SwissProt Accessions	Q64732, O08753	Gene names	Foxb1, Fkh5, Foxb1a, Foxb1b, Mf3
Domain Architecture
Description	Forkhead box protein B1 (Transcription factor FKH-5).

FOXD4_MOUSE
NC score	0.952257 (rank : 26)	θ value	2.35151e-24 (rank : 37)
Query Neighborhood Hits	99	Target Neighborhood Hits	98	Shared Neighborhood Hits	81
SwissProt Accessions	Q60688, Q61573	Gene names	Foxd4, Fkh2, Fkhl9, Freac5
Domain Architecture
Description	Forkhead box protein D4 (Forkhead-related protein FKHL9) (Forkhead- related transcription factor 5) (FREAC-5) (Transcription factor FKH- 2).

FOXGA_HUMAN
NC score	0.951389 (rank : 27)	θ value	1.24688e-25 (rank : 24)
Query Neighborhood Hits	99	Target Neighborhood Hits	132	Shared Neighborhood Hits	82
SwissProt Accessions	P55316	Gene names	FOXG1A, FKHL2
Domain Architecture
Description	Forkhead box protein G1A (Forkhead-related protein FKHL2) (Transcription factor BF-2) (Brain factor 2) (BF2) (HFK2).

FREA_HUMAN
NC score	0.951067 (rank : 28)	θ value	4.57862e-28 (rank : 7)
Query Neighborhood Hits	99	Target Neighborhood Hits	205	Shared Neighborhood Hits	84
SwissProt Accessions	O43638, Q96D28	Gene names	FKHL18, FREAC10
Domain Architecture	No domain graphic available
Description	Forkhead-related transcription factor 10 (FREAC-10) (Forkhead-like 18 protein).

FOXB1_HUMAN
NC score	0.950905 (rank : 29)	θ value	8.93572e-24 (rank : 44)
Query Neighborhood Hits	99	Target Neighborhood Hits	121	Shared Neighborhood Hits	82
SwissProt Accessions	Q99853, O60652, O75917	Gene names	FOXB1, FKH5
Domain Architecture
Description	Forkhead box protein B1 (Transcription factor FKH-5).

FOXF1_MOUSE
NC score	0.950734 (rank : 30)	θ value	3.75424e-22 (rank : 50)
Query Neighborhood Hits	99	Target Neighborhood Hits	86	Shared Neighborhood Hits	81
SwissProt Accessions	Q61080, Q61661	Gene names	Foxf1, Fkhl5, Foxf1a, Freac1, Hfh8
Domain Architecture
Description	Forkhead box protein F1 (Forkhead-related protein FKHL5) (Forkhead- related transcription factor 1) (FREAC-1) (Hepatocyte nuclear factor 3 forkhead homolog 8) (HFH-8).

FX4L1_HUMAN
NC score	0.950326 (rank : 31)	θ value	5.06226e-27 (rank : 14)
Query Neighborhood Hits	99	Target Neighborhood Hits	111	Shared Neighborhood Hits	81
SwissProt Accessions	Q9NU39	Gene names	FOXD4L1
Domain Architecture
Description	Forkhead box protein D4-like 1.

FX4L4_HUMAN
NC score	0.950037 (rank : 32)	θ value	2.51237e-26 (rank : 16)
Query Neighborhood Hits	99	Target Neighborhood Hits	101	Shared Neighborhood Hits	81
SwissProt Accessions	Q8WXT5	Gene names	FOXD4L4, FOXD4B
Domain Architecture
Description	Forkhead box protein D4-like 4 (Forkhead box protein D4B) (Myeloid factor-gamma).

FOXQ1_HUMAN
NC score	0.950001 (rank : 33)	θ value	3.28887e-18 (rank : 56)
Query Neighborhood Hits	99	Target Neighborhood Hits	115	Shared Neighborhood Hits	81
SwissProt Accessions	Q9C009, Q9NS06	Gene names	FOXQ1, HFH1
Domain Architecture
Description	Forkhead box protein Q1 (Hepatocyte nuclear factor 3 forkhead homolog 1) (HNF-3/forkhead-like protein 1) (HFH-1).

FOXQ1_MOUSE
NC score	0.949500 (rank : 34)	θ value	1.13037e-18 (rank : 54)
Query Neighborhood Hits	99	Target Neighborhood Hits	96	Shared Neighborhood Hits	81
SwissProt Accessions	O70220	Gene names	Foxq1, Hfh1, Hfh1l
Domain Architecture
Description	Forkhead box protein Q1 (Hepatocyte nuclear factor 3 forkhead homolog 1) (HNF-3/forkhead-like protein 1) (HFH-1) (HFH-1l).

FOXGB_MOUSE
NC score	0.949302 (rank : 35)	θ value	5.23862e-24 (rank : 42)
Query Neighborhood Hits	99	Target Neighborhood Hits	148	Shared Neighborhood Hits	82
SwissProt Accessions	Q60987, Q80VP3	Gene names	Foxg1b, Fkhl1, Foxg1, Hfhbf1
Domain Architecture
Description	Forkhead box protein G1B (Forkhead-related protein FKHL1) (Transcription factor BF-1) (Brain factor 1) (BF1).

HNF3B_MOUSE
NC score	0.948953 (rank : 36)	θ value	2.35151e-24 (rank : 39)
Query Neighborhood Hits	99	Target Neighborhood Hits	112	Shared Neighborhood Hits	81
SwissProt Accessions	P35583, Q60602	Gene names	Foxa2, Hnf3b, Tcf-3b, Tcf3b
Domain Architecture
Description	Hepatocyte nuclear factor 3-beta (HNF-3B) (Forkhead box protein A2).

FOXK2_HUMAN
NC score	0.948807 (rank : 37)	θ value	2.05525e-28 (rank : 5)
Query Neighborhood Hits	99	Target Neighborhood Hits	190	Shared Neighborhood Hits	81
SwissProt Accessions	Q01167, Q13622, Q13623, Q13624	Gene names	FOXK2, ILF, ILF1
Domain Architecture
Description	Forkhead box protein K2 (Interleukin enhancer-binding factor 1) (Cellular transcription factor ILF-1).

FOXF1_HUMAN
NC score	0.948692 (rank : 38)	θ value	6.40375e-22 (rank : 52)
Query Neighborhood Hits	99	Target Neighborhood Hits	106	Shared Neighborhood Hits	81
SwissProt Accessions	Q12946, Q5FWE5	Gene names	FOXF1, FKHL5, FREAC1
Domain Architecture
Description	Forkhead box protein F1 (Forkhead-related protein FKHL5) (Forkhead- related transcription factor 1) (FREAC-1) (Forkhead-related activator 1).

HNF3B_HUMAN
NC score	0.948556 (rank : 39)	θ value	2.35151e-24 (rank : 38)
Query Neighborhood Hits	99	Target Neighborhood Hits	106	Shared Neighborhood Hits	81
SwissProt Accessions	Q9Y261, Q8WUW4, Q96DF7	Gene names	FOXA2, HNF3B, TCF3B
Domain Architecture
Description	Hepatocyte nuclear factor 3-beta (HNF-3B) (Forkhead box protein A2).

FOXGB_HUMAN
NC score	0.948435 (rank : 40)	θ value	5.23862e-24 (rank : 41)
Query Neighborhood Hits	99	Target Neighborhood Hits	123	Shared Neighborhood Hits	82
SwissProt Accessions	P55315	Gene names	FOXG1B, FKHL1
Domain Architecture
Description	Forkhead box protein G1B (Forkhead-related protein FKHL1) (Transcription factor BF-1) (Brain factor 1) (BF1) (HFK1).

FOXC2_MOUSE
NC score	0.947770 (rank : 41)	θ value	4.73814e-25 (rank : 31)
Query Neighborhood Hits	99	Target Neighborhood Hits	124	Shared Neighborhood Hits	81
SwissProt Accessions	Q61850, P97948, Q63869, Q8C694	Gene names	Foxc2, Fkh14, Fkhl14, Mfh1
Domain Architecture
Description	Forkhead box protein C2 (Forkhead-related protein FKHL14) (Mesenchyme fork head protein 1) (MFH-1 protein) (Transcription factor FKH-14).

FOXD4_HUMAN
NC score	0.947427 (rank : 42)	θ value	3.28125e-26 (rank : 17)
Query Neighborhood Hits	99	Target Neighborhood Hits	106	Shared Neighborhood Hits	81
SwissProt Accessions	Q12950, Q5VVK1, Q8WXT6	Gene names	FOXD4, FKHL9, FOXD4A, FREAC5
Domain Architecture
Description	Forkhead box protein D4 (Forkhead-related protein FKHL9) (Forkhead- related transcription factor 5) (FREAC-5) (Myeloid factor-alpha).

FOXK1_MOUSE
NC score	0.945293 (rank : 43)	θ value	3.87602e-27 (rank : 13)
Query Neighborhood Hits	99	Target Neighborhood Hits	215	Shared Neighborhood Hits	83
SwissProt Accessions	P42128, O35939	Gene names	Foxk1, Mnf
Domain Architecture
Description	Forkhead box protein K1 (Myocyte nuclear factor) (MNF).

HNF3A_HUMAN
NC score	0.944412 (rank : 44)	θ value	6.18819e-25 (rank : 34)
Query Neighborhood Hits	99	Target Neighborhood Hits	119	Shared Neighborhood Hits	81
SwissProt Accessions	P55317, Q9H2A0	Gene names	FOXA1, HNF3A, TCF3A
Domain Architecture
Description	Hepatocyte nuclear factor 3-alpha (HNF-3A) (Forkhead box protein A1).

FOXJ2_MOUSE
NC score	0.943972 (rank : 45)	θ value	7.80994e-28 (rank : 8)
Query Neighborhood Hits	99	Target Neighborhood Hits	151	Shared Neighborhood Hits	83
SwissProt Accessions	Q9ES18	Gene names	Foxj2, Fhx
Domain Architecture
Description	Forkhead box protein J2 (Fork head homologous X).

FOXC1_MOUSE
NC score	0.943635 (rank : 46)	θ value	2.12685e-25 (rank : 26)
Query Neighborhood Hits	99	Target Neighborhood Hits	218	Shared Neighborhood Hits	83
SwissProt Accessions	Q61572, O88409, Q61582	Gene names	Foxc1, Fkh1, Fkhl7, Freac3, Mf1
Domain Architecture
Description	Forkhead box protein C1 (Forkhead-related protein FKHL7) (Forkhead- related transcription factor 3) (FREAC-3) (Transcription factor FKH-1) (Mesoderm/mesenchyme forkhead 1) (MF-1).

FOXC1_HUMAN
NC score	0.943272 (rank : 47)	θ value	2.12685e-25 (rank : 25)
Query Neighborhood Hits	99	Target Neighborhood Hits	208	Shared Neighborhood Hits	82
SwissProt Accessions	Q12948, Q86UP7, Q9BYM1, Q9NUE5, Q9UDD0, Q9UP06	Gene names	FOXC1, FKHL7, FREAC3
Domain Architecture
Description	Forkhead box protein C1 (Forkhead-related protein FKHL7) (Forkhead- related transcription factor 3) (FREAC-3).

HNF3A_MOUSE
NC score	0.942546 (rank : 48)	θ value	4.73814e-25 (rank : 32)
Query Neighborhood Hits	99	Target Neighborhood Hits	140	Shared Neighborhood Hits	81
SwissProt Accessions	P35582, Q61108	Gene names	Foxa1, Hnf3a, Tcf-3a, Tcf3a
Domain Architecture
Description	Hepatocyte nuclear factor 3-alpha (HNF-3A) (Forkhead box protein A1).

FOXJ3_HUMAN
NC score	0.941320 (rank : 49)	θ value	1.73987e-27 (rank : 9)
Query Neighborhood Hits	99	Target Neighborhood Hits	177	Shared Neighborhood Hits	82
SwissProt Accessions	Q9UPW0, Q9NSS7	Gene names	FOXJ3, KIAA1041
Domain Architecture
Description	Forkhead box protein J3.

FOXJ3_MOUSE
NC score	0.941214 (rank : 50)	θ value	1.73987e-27 (rank : 10)
Query Neighborhood Hits	99	Target Neighborhood Hits	190	Shared Neighborhood Hits	81
SwissProt Accessions	Q8BUR3, Q3UTD8	Gene names	Foxj3, Kiaa1041
Domain Architecture
Description	Forkhead box protein J3.

FOXC2_HUMAN
NC score	0.941034 (rank : 51)	θ value	4.73814e-25 (rank : 30)
Query Neighborhood Hits	99	Target Neighborhood Hits	236	Shared Neighborhood Hits	82
SwissProt Accessions	Q99958	Gene names	FOXC2, FKHL14, MFH1
Domain Architecture
Description	Forkhead box protein C2 (Forkhead-related protein FKHL14) (Mesenchyme fork head protein 1) (MFH-1 protein) (Transcription factor FKH-14).

FOXN2_HUMAN
NC score	0.940910 (rank : 52)	θ value	1.92812e-18 (rank : 55)
Query Neighborhood Hits	99	Target Neighborhood Hits	85	Shared Neighborhood Hits	81
SwissProt Accessions	P32314, Q15769	Gene names	FOXN2, HTLF
Domain Architecture
Description	Forkhead box protein N2 (Human T-cell leukemia virus enhancer factor).

FOXJ2_HUMAN
NC score	0.936619 (rank : 53)	θ value	2.96777e-27 (rank : 11)
Query Neighborhood Hits	99	Target Neighborhood Hits	239	Shared Neighborhood Hits	84
SwissProt Accessions	Q9P0K8, Q96PS9, Q9NSN5	Gene names	FOXJ2, FHX
Domain Architecture
Description	Forkhead box protein J2 (Fork head homologous X).

FOXN3_MOUSE
NC score	0.931685 (rank : 54)	θ value	1.5242e-23 (rank : 47)
Query Neighborhood Hits	99	Target Neighborhood Hits	114	Shared Neighborhood Hits	81
SwissProt Accessions	Q499D0, Q8C5N8, Q9CU83	Gene names	Ches1, Foxn3
Domain Architecture	No domain graphic available
Description	Checkpoint suppressor 1 (Forkhead box protein N3).

FOXN3_HUMAN
NC score	0.930383 (rank : 55)	θ value	5.23862e-24 (rank : 43)
Query Neighborhood Hits	99	Target Neighborhood Hits	121	Shared Neighborhood Hits	81
SwissProt Accessions	O00409, Q96II7, Q9UIE7	Gene names	CHES1, FOXN3
Domain Architecture
Description	Checkpoint suppressor 1 (Forkhead box protein N3).

FOXE2_HUMAN
NC score	0.924687 (rank : 56)	θ value	2.97466e-19 (rank : 53)
Query Neighborhood Hits	99	Target Neighborhood Hits	236	Shared Neighborhood Hits	82
SwissProt Accessions	Q99526	Gene names	FOXE2
Domain Architecture
Description	Forkhead box protein E2 (HNF-3/fork head-like protein 5) (HFKL5) (HFKH4).

FOXH1_MOUSE
NC score	0.916986 (rank : 57)	θ value	2.88119e-14 (rank : 72)
Query Neighborhood Hits	99	Target Neighborhood Hits	118	Shared Neighborhood Hits	82
SwissProt Accessions	O88621, Q9QZL5, Q9R241	Gene names	Foxh1, Fast1, Fast2
Domain Architecture
Description	Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (Forkhead activin signal transducer 2) (Fast-2).

FOXH1_HUMAN
NC score	0.912235 (rank : 58)	θ value	8.95645e-16 (rank : 68)
Query Neighborhood Hits	99	Target Neighborhood Hits	258	Shared Neighborhood Hits	84
SwissProt Accessions	O75593	Gene names	FOXH1, FAST1, FAST2
Domain Architecture
Description	Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (hFAST-1) (Forkhead activin signal transducer 2) (Fast-2).

FOXM1_MOUSE
NC score	0.888536 (rank : 59)	θ value	4.44505e-15 (rank : 71)
Query Neighborhood Hits	99	Target Neighborhood Hits	134	Shared Neighborhood Hits	82
SwissProt Accessions	O08696	Gene names	Foxm1, Fkh16
Domain Architecture
Description	Forkhead box protein M1 (Forkhead homolog 16) (Winged-helix transcription factor Trident).

FOXN4_MOUSE
NC score	0.883522 (rank : 60)	θ value	5.25075e-16 (rank : 66)
Query Neighborhood Hits	99	Target Neighborhood Hits	154	Shared Neighborhood Hits	81
SwissProt Accessions	Q8K3Q3, Q920C0	Gene names	Foxn4
Domain Architecture
Description	Forkhead box protein N4.

FOXP3_HUMAN
NC score	0.880203 (rank : 61)	θ value	1.99529e-15 (rank : 69)
Query Neighborhood Hits	99	Target Neighborhood Hits	105	Shared Neighborhood Hits	81
SwissProt Accessions	Q9BZS1, O60827, Q4ZH51	Gene names	FOXP3, IPEX
Domain Architecture
Description	Forkhead box protein P3 (Scurfin).

FOXP3_MOUSE
NC score	0.879474 (rank : 62)	θ value	5.25075e-16 (rank : 67)
Query Neighborhood Hits	99	Target Neighborhood Hits	117	Shared Neighborhood Hits	81
SwissProt Accessions	Q99JB6	Gene names	Foxp3
Domain Architecture
Description	Forkhead box protein P3 (Scurfin).

FOXM1_HUMAN
NC score	0.879106 (rank : 63)	θ value	2.60593e-15 (rank : 70)
Query Neighborhood Hits	99	Target Neighborhood Hits	167	Shared Neighborhood Hits	82
SwissProt Accessions	Q08050, O43258, O43259, O43260, Q4ZGG7, Q9BRL2	Gene names	FOXM1, FKHL16, HFH11, MPP2, WIN
Domain Architecture
Description	Forkhead box protein M1 (Forkhead-related protein FKHL16) (Hepatocyte nuclear factor 3 forkhead homolog 11) (HNF-3/fork-head homolog 11) (HFH-11) (Winged helix factor from INS-1 cells) (M-phase phosphoprotein 2) (MPM-2 reactive phosphoprotein 2) (Transcription factor Trident).

FOXN4_HUMAN
NC score	0.874655 (rank : 64)	θ value	1.38178e-16 (rank : 65)
Query Neighborhood Hits	99	Target Neighborhood Hits	248	Shared Neighborhood Hits	84
SwissProt Accessions	Q96NZ1, Q6ZMR4, Q96NZ0	Gene names	FOXN4
Domain Architecture	No domain graphic available
Description	Forkhead box protein N4.

FOXN1_MOUSE
NC score	0.865627 (rank : 65)	θ value	8.10077e-17 (rank : 61)
Query Neighborhood Hits	99	Target Neighborhood Hits	300	Shared Neighborhood Hits	84
SwissProt Accessions	Q61575	Gene names	Foxn1, Fkh19, Hfh11, Whn
Domain Architecture
Description	Forkhead box protein N1 (Transcription factor winged-helix nude) (Hepatocyte nuclear factor 3 forkhead homolog 11) (HNF-3/forkhead homolog 11) (HFH-11).

FOXN1_HUMAN
NC score	0.856057 (rank : 66)	θ value	1.058e-16 (rank : 64)
Query Neighborhood Hits	99	Target Neighborhood Hits	377	Shared Neighborhood Hits	86
SwissProt Accessions	O15353, O15352	Gene names	FOXN1, WHN
Domain Architecture
Description	Forkhead box protein N1 (Transcription factor winged-helix nude).

FOXP1_HUMAN
NC score	0.851760 (rank : 67)	θ value	8.10077e-17 (rank : 62)
Query Neighborhood Hits	99	Target Neighborhood Hits	168	Shared Neighborhood Hits	82
SwissProt Accessions	Q9H334, Q9H332, Q9H333, Q9P0R1	Gene names	FOXP1
Domain Architecture
Description	Forkhead box protein P1.

FOXP4_MOUSE
NC score	0.850377 (rank : 68)	θ value	1.24977e-17 (rank : 58)
Query Neighborhood Hits	99	Target Neighborhood Hits	211	Shared Neighborhood Hits	83
SwissProt Accessions	Q9DBY0, Q80V92, Q8CG10, Q8CIS1	Gene names	Foxp4
Domain Architecture	No domain graphic available
Description	Forkhead box protein P4 (Fork head-related protein like A) (mFKHLA).

FOXO4_HUMAN
NC score	0.848717 (rank : 69)	θ value	2.0648e-12 (rank : 73)
Query Neighborhood Hits	99	Target Neighborhood Hits	197	Shared Neighborhood Hits	83
SwissProt Accessions	P98177, O43821, Q13720, Q3KPF1, Q8TDK9	Gene names	MLLT7, AFX, AFX1, FOXO4
Domain Architecture
Description	Fork head domain transcription factor AFX1 (Forkhead box protein O4).

FOXP4_HUMAN
NC score	0.846113 (rank : 70)	θ value	4.29542e-18 (rank : 57)
Query Neighborhood Hits	99	Target Neighborhood Hits	246	Shared Neighborhood Hits	83
SwissProt Accessions	Q8IVH2, Q96E19	Gene names	FOXP4, FKHLA
Domain Architecture
Description	Forkhead box protein P4 (Fork head-related protein-like A).

FOXO3_HUMAN
NC score	0.842887 (rank : 71)	θ value	2.79066e-09 (rank : 77)
Query Neighborhood Hits	99	Target Neighborhood Hits	105	Shared Neighborhood Hits	81
SwissProt Accessions	O43524, O15171, Q5T2I7, Q9BZ04	Gene names	FOXO3A, FKHRL1
Domain Architecture
Description	Forkhead box protein O3A (Forkhead in rhabdomyosarcoma-like 1) (AF6q21 protein).

FOXP1_MOUSE
NC score	0.842476 (rank : 72)	θ value	8.10077e-17 (rank : 63)
Query Neighborhood Hits	99	Target Neighborhood Hits	241	Shared Neighborhood Hits	82
SwissProt Accessions	P58462	Gene names	Foxp1
Domain Architecture
Description	Forkhead box protein P1 (Forkhead-related transcription factor 1).

FOXR2_MOUSE
NC score	0.841974 (rank : 73)	θ value	4.76016e-09 (rank : 78)
Query Neighborhood Hits	99	Target Neighborhood Hits	88	Shared Neighborhood Hits	81
SwissProt Accessions	Q3UM89	Gene names	Foxr2, Foxn6
Domain Architecture	No domain graphic available
Description	Forkhead box protein R2 (Forkhead box protein N6).

FOXO4_MOUSE
NC score	0.841843 (rank : 74)	θ value	4.30538e-10 (rank : 76)
Query Neighborhood Hits	99	Target Neighborhood Hits	168	Shared Neighborhood Hits	82
SwissProt Accessions	Q9WVH3	Gene names	Mllt7, Afx, Afx1, Fkhr3, Foxo4
Domain Architecture
Description	Fork head domain transcription factor AFX1 (Afxh) (Forkhead box protein O4).

FOXR1_MOUSE
NC score	0.837027 (rank : 75)	θ value	1.17247e-07 (rank : 79)
Query Neighborhood Hits	99	Target Neighborhood Hits	84	Shared Neighborhood Hits	81
SwissProt Accessions	Q3UTB7	Gene names	Foxr1, Foxn5
Domain Architecture	No domain graphic available
Description	Forkhead box protein R1 (Forkhead box protein N5).

FOXO1_HUMAN
NC score	0.827301 (rank : 76)	θ value	2.98157e-11 (rank : 74)
Query Neighborhood Hits	99	Target Neighborhood Hits	126	Shared Neighborhood Hits	83
SwissProt Accessions	Q12778, O43523, Q5VYC7, Q6NSK6	Gene names	FOXO1A, FKHR
Domain Architecture
Description	Forkhead box protein O1A (Forkhead in rhabdomyosarcoma).

FOXO1_MOUSE
NC score	0.827072 (rank : 77)	θ value	3.89403e-11 (rank : 75)
Query Neighborhood Hits	99	Target Neighborhood Hits	118	Shared Neighborhood Hits	82
SwissProt Accessions	Q9R1E0	Gene names	Foxo1a, Fkhr, Foxo1
Domain Architecture
Description	Forkhead box protein O1A (Forkhead in rhabdomyosarcoma).

FOXP2_HUMAN
NC score	0.808716 (rank : 78)	θ value	4.74913e-17 (rank : 59)
Query Neighborhood Hits	99	Target Neighborhood Hits	366	Shared Neighborhood Hits	82
SwissProt Accessions	O15409, Q6ZND1, Q75MJ3, Q8IZE0, Q8N0W2, Q8N6B7, Q8N6B8, Q8NFQ1, Q8NFQ2, Q8NFQ3, Q8NFQ4, Q8TD74	Gene names	FOXP2, CAGH44, TNRC10
Domain Architecture
Description	Forkhead box protein P2 (CAG repeat protein 44) (Trinucleotide repeat- containing gene 10 protein).

FOXR1_HUMAN
NC score	0.807928 (rank : 79)	θ value	2.21117e-06 (rank : 80)
Query Neighborhood Hits	99	Target Neighborhood Hits	85	Shared Neighborhood Hits	81
SwissProt Accessions	Q6PIV2, Q86UT9, Q8IXX2	Gene names	FOXR1, DLNB13, FOXN5
Domain Architecture	No domain graphic available
Description	Forkhead box protein R1 (Forkhead box protein N5).

FOXP2_MOUSE
NC score	0.806256 (rank : 80)	θ value	4.74913e-17 (rank : 60)
Query Neighborhood Hits	99	Target Neighborhood Hits	366	Shared Neighborhood Hits	82
SwissProt Accessions	P58463, Q6PD37, Q8C4F0, Q8R441	Gene names	Foxp2
Domain Architecture
Description	Forkhead box protein P2.

FOXR2_HUMAN
NC score	0.698252 (rank : 81)	θ value	0.0148317 (rank : 81)
Query Neighborhood Hits	99	Target Neighborhood Hits	97	Shared Neighborhood Hits	81
SwissProt Accessions	Q6PJQ5	Gene names	FOXR2, FOXN6
Domain Architecture	No domain graphic available
Description	Forkhead box protein R2 (Forkhead box protein N6).

PRR12_HUMAN
NC score	0.034438 (rank : 82)	θ value	3.0926 (rank : 87)
Query Neighborhood Hits	99	Target Neighborhood Hits	460	Shared Neighborhood Hits	12
SwissProt Accessions	Q9ULL5, Q8N4J6	Gene names	PRR12, KIAA1205
Domain Architecture	No domain graphic available
Description	Proline-rich protein 12.

MBD5_HUMAN
NC score	0.030852 (rank : 83)	θ value	0.0961366 (rank : 82)
Query Neighborhood Hits	99	Target Neighborhood Hits	176	Shared Neighborhood Hits	5
SwissProt Accessions	Q9P267, Q9NUV6	Gene names	MBD5, KIAA1461
Domain Architecture	No domain graphic available
Description	Methyl-CpG-binding domain protein 5 (Methyl-CpG-binding protein MBD5).

DBPA_HUMAN
NC score	0.020269 (rank : 84)	θ value	1.38821 (rank : 84)
Query Neighborhood Hits	99	Target Neighborhood Hits	52	Shared Neighborhood Hits	4
SwissProt Accessions	P16989, Q14121, Q969N6	Gene names	CSDA, DBPA
Domain Architecture
Description	DNA-binding protein A (Cold shock domain-containing protein A) (Single-strand DNA-binding protein NF-GMB).

PB1_HUMAN
NC score	0.015668 (rank : 85)	θ value	6.88961 (rank : 94)
Query Neighborhood Hits	99	Target Neighborhood Hits	261	Shared Neighborhood Hits	5
SwissProt Accessions	Q86U86, Q9H2T3, Q9H2T4, Q9H2T5, Q9H301, Q9H314	Gene names	PB1
Domain Architecture	No domain graphic available
Description	Protein polybromo-1 (hPB1) (Polybromo-1D) (BRG1-associated factor 180) (BAF180).

BAT3_HUMAN
NC score	0.015159 (rank : 86)	θ value	6.88961 (rank : 91)
Query Neighborhood Hits	99	Target Neighborhood Hits	490	Shared Neighborhood Hits	13
SwissProt Accessions	P46379, O95874, Q5SQ35, Q5SQ36, Q5SQ37, Q5SRP8, Q96SA6, Q9BCN4	Gene names	BAT3, G3
Domain Architecture
Description	Large proline-rich protein BAT3 (HLA-B-associated transcript 3) (Protein G3).

RGS3_HUMAN
NC score	0.014256 (rank : 87)	θ value	0.279714 (rank : 83)
Query Neighborhood Hits	99	Target Neighborhood Hits	1375	Shared Neighborhood Hits	15
SwissProt Accessions	P49796, Q5VXC1, Q5VZ05, Q6ZRM5, Q8IUQ1, Q8NC47, Q8NFN4, Q8NFN5, Q8TD59, Q8TD68, Q8WXA0	Gene names	RGS3
Domain Architecture
Description	Regulator of G-protein signaling 3 (RGS3) (RGP3).

DBPA_MOUSE
NC score	0.013494 (rank : 88)	θ value	8.99809 (rank : 96)
Query Neighborhood Hits	99	Target Neighborhood Hits	64	Shared Neighborhood Hits	5
SwissProt Accessions	Q9JKB3, Q80WG4, Q9EQF7, Q9EQF8	Gene names	Csda, Msy4, Ybx3
Domain Architecture	No domain graphic available
Description	DNA-binding protein A (Cold shock domain-containing protein A) (Y-box protein 3).

MLL3_HUMAN
NC score	0.011431 (rank : 89)	θ value	3.0926 (rank : 85)
Query Neighborhood Hits	99	Target Neighborhood Hits	1644	Shared Neighborhood Hits	25
SwissProt Accessions	Q8NEZ4, Q8NC02, Q8NDF6, Q9H9P4, Q9NR13, Q9P222, Q9UDR7	Gene names	MLL3, HALR, KIAA1506
Domain Architecture
Description	Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog (EC 2.1.1.43) (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (Homologous to ALR protein).

CK056_HUMAN
NC score	0.011074 (rank : 90)	θ value	8.99809 (rank : 95)
Query Neighborhood Hits	99	Target Neighborhood Hits	42	Shared Neighborhood Hits	3
SwissProt Accessions	Q8N612, Q9C0A4, Q9H0N3, Q9H624	Gene names	C11orf56, KIAA1759
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C11orf56.

FMNL_HUMAN
NC score	0.010410 (rank : 91)	θ value	6.88961 (rank : 93)
Query Neighborhood Hits	99	Target Neighborhood Hits	529	Shared Neighborhood Hits	13
SwissProt Accessions	O95466, Q6DKG5, Q6IBP3, Q86UH1, Q8N671, Q8TDH1, Q96H10	Gene names	FMNL1, C17orf1, C17orf1B, FMNL
Domain Architecture
Description	Formin-like protein 1 (Leukocyte formin) (CLL-associated antigen KW- 13).

MUC5B_HUMAN
NC score	0.008504 (rank : 92)	θ value	5.27518 (rank : 90)
Query Neighborhood Hits	99	Target Neighborhood Hits	1020	Shared Neighborhood Hits	14
SwissProt Accessions	Q9HC84, O00447, O00573, O14985, O15494, O95291, O95451, Q14881, Q99552, Q9UE28	Gene names	MUC5B, MUC5
Domain Architecture
Description	Mucin-5B precursor (Mucin-5 subtype B, tracheobronchial) (High molecular weight salivary mucin MG1) (Sublingual gland mucin).

FGF21_HUMAN
NC score	0.004075 (rank : 93)	θ value	6.88961 (rank : 92)
Query Neighborhood Hits	99	Target Neighborhood Hits	50	Shared Neighborhood Hits	3
SwissProt Accessions	Q9NSA1	Gene names	FGF21
Domain Architecture
Description	Fibroblast growth factor 21 precursor (FGF-21).

SMAD9_MOUSE
NC score	0.004052 (rank : 94)	θ value	4.03905 (rank : 88)
Query Neighborhood Hits	99	Target Neighborhood Hits	75	Shared Neighborhood Hits	3
SwissProt Accessions	Q9JIW5, Q8CFF9	Gene names	Smad9, Madh8, Madh9, Smad8
Domain Architecture
Description	Mothers against decapentaplegic homolog 9 (SMAD 9) (Mothers against DPP homolog 9) (Smad9) (Smad8).

EFNB3_HUMAN
NC score	0.003334 (rank : 95)	θ value	8.99809 (rank : 97)
Query Neighborhood Hits	99	Target Neighborhood Hits	48	Shared Neighborhood Hits	3
SwissProt Accessions	Q15768, O00680, Q8TBH7, Q92875	Gene names	EFNB3, EPLG8, LERK8
Domain Architecture
Description	Ephrin-B3 precursor (EPH-related receptor tyrosine kinase ligand 8) (LERK-8) (EPH-related receptor transmembrane ligand ELK-L3).

CSKI1_MOUSE
NC score	0.000580 (rank : 96)	θ value	5.27518 (rank : 89)
Query Neighborhood Hits	99	Target Neighborhood Hits	1031	Shared Neighborhood Hits	14
SwissProt Accessions	Q6P9K8, Q6ZPU2, Q8BWU2, Q8BX99, Q9CXH0	Gene names	Caskin1, Kiaa1306
Domain Architecture	No domain graphic available
Description	Caskin-1 (CASK-interacting protein 1).

KCNQ5_HUMAN
NC score	0.000460 (rank : 97)	θ value	8.99809 (rank : 98)
Query Neighborhood Hits	99	Target Neighborhood Hits	163	Shared Neighborhood Hits	2
SwissProt Accessions	Q9NR82, Q9NRN0, Q9NYA6	Gene names	KCNQ5
Domain Architecture
Description	Potassium voltage-gated channel subfamily KQT member 5 (Voltage-gated potassium channel subunit Kv7.5) (Potassium channel subunit alpha KvLQT5) (KQT-like 5).

PCDGK_HUMAN
NC score	-0.000828 (rank : 98)	θ value	3.0926 (rank : 86)
Query Neighborhood Hits	99	Target Neighborhood Hits	162	Shared Neighborhood Hits	3
SwissProt Accessions	Q9UN70, O60622, Q08192, Q9Y5C4	Gene names	PCDHGC3, PCDH2
Domain Architecture
Description	Protocadherin gamma C3 precursor (PCDH-gamma-C3) (Protocadherin 43) (PC-43) (Protocadherin 2).

PKHA6_MOUSE
NC score	-0.000935 (rank : 99)	θ value	8.99809 (rank : 99)
Query Neighborhood Hits	99	Target Neighborhood Hits	591	Shared Neighborhood Hits	3
SwissProt Accessions	Q7TQG1, Q8K0J5	Gene names	Plekha6, Pepp3
Domain Architecture
Description	Pleckstrin homology domain-containing family A member 6 (Phosphoinositol 3-phosphate-binding protein 3) (PEPP-3).