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Network neighborhood for query Sequence : SMD1_HUMAN

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SMD1_HUMAN
SwissProt Accessions	P62314, P13641	Gene names	SNRPD1
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) (Sm-D1) (Sm-D autoantigen).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

SMD1_HUMAN
θ value	1.51363e-47 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	15	Target Neighborhood Hits	15	Shared Neighborhood Hits	15
SwissProt Accessions	P62314, P13641	Gene names	SNRPD1
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) (Sm-D1) (Sm-D autoantigen).

SMD1_MOUSE
θ value	1.51363e-47 (rank : 2)	NC score	0.999962 (rank : 2)
Query Neighborhood Hits	15	Target Neighborhood Hits	15	Shared Neighborhood Hits	15
SwissProt Accessions	P62315, P13641, Q3UYM0	Gene names	Snrpd1
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) (Sm-D1) (Sm-D autoantigen).

LSM10_HUMAN
θ value	4.92598e-06 (rank : 3)	NC score	0.556776 (rank : 3)
Query Neighborhood Hits	15	Target Neighborhood Hits	11	Shared Neighborhood Hits	10
SwissProt Accessions	Q969L4	Gene names	LSM10
Domain Architecture
Description	U7 snRNA-associated Sm-like protein LSm10.

SMD3_HUMAN
θ value	1.09739e-05 (rank : 4)	NC score	0.544466 (rank : 4)
Query Neighborhood Hits	15	Target Neighborhood Hits	9	Shared Neighborhood Hits	8
SwissProt Accessions	P62318, P43331	Gene names	SNRPD3
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D3 (snRNP core protein D3) (Sm-D3).

SMD3_MOUSE
θ value	1.09739e-05 (rank : 5)	NC score	0.544466 (rank : 5)
Query Neighborhood Hits	15	Target Neighborhood Hits	9	Shared Neighborhood Hits	8
SwissProt Accessions	P62320, P43331, Q3TV81	Gene names	Snrpd3
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D3 (snRNP core protein D3) (Sm-D3).

LSM10_MOUSE
θ value	0.00020696 (rank : 6)	NC score	0.532352 (rank : 6)
Query Neighborhood Hits	15	Target Neighborhood Hits	13	Shared Neighborhood Hits	10
SwissProt Accessions	Q8QZX5	Gene names	Lsm10
Domain Architecture	No domain graphic available
Description	U7 snRNA-associated Sm-like protein LSm10.

LSM2_HUMAN
θ value	0.0113563 (rank : 7)	NC score	0.384127 (rank : 9)
Query Neighborhood Hits	15	Target Neighborhood Hits	14	Shared Neighborhood Hits	10
SwissProt Accessions	Q9Y333	Gene names	LSM2, C6orf28, G7b
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm2 (snRNP core Sm-like protein Sm-x5) (Small nuclear ribonuclear protein D homolog) (Protein G7b).

LSM2_MOUSE
θ value	0.0113563 (rank : 8)	NC score	0.384127 (rank : 10)
Query Neighborhood Hits	15	Target Neighborhood Hits	14	Shared Neighborhood Hits	10
SwissProt Accessions	O35900	Gene names	Lsm2, G7b
Domain Architecture	No domain graphic available
Description	U6 snRNA-associated Sm-like protein LSm2 (snRNP core Sm-like protein Sm-x5) (Protein G7b).

LSM4_HUMAN
θ value	0.0736092 (rank : 9)	NC score	0.391507 (rank : 8)
Query Neighborhood Hits	15	Target Neighborhood Hits	14	Shared Neighborhood Hits	12
SwissProt Accessions	Q9Y4Z0	Gene names	LSM4
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm4 (Glycine-rich protein) (GRP).

LSM4_MOUSE
θ value	0.0961366 (rank : 10)	NC score	0.397742 (rank : 7)
Query Neighborhood Hits	15	Target Neighborhood Hits	16	Shared Neighborhood Hits	12
SwissProt Accessions	Q9QXA5	Gene names	Lsm4
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm4.

ANC1_HUMAN
θ value	5.27518 (rank : 11)	NC score	0.053728 (rank : 14)
Query Neighborhood Hits	15	Target Neighborhood Hits	46	Shared Neighborhood Hits	4
SwissProt Accessions	Q9H1A4, Q9BSE6, Q9H8D0	Gene names	ANAPC1, TSG24
Domain Architecture	No domain graphic available
Description	Anaphase-promoting complex subunit 1 (APC1) (Cyclosome subunit 1) (Protein Tsg24) (Mitotic checkpoint regulator).

ANC1_MOUSE
θ value	5.27518 (rank : 12)	NC score	0.053730 (rank : 13)
Query Neighborhood Hits	15	Target Neighborhood Hits	42	Shared Neighborhood Hits	4
SwissProt Accessions	P53995, Q8BP33, Q8C772	Gene names	Anapc1, Mcpr, Tsg24
Domain Architecture	No domain graphic available
Description	Anaphase-promoting complex subunit 1 (APC1) (Cyclosome subunit 1) (Protein Tsg24) (Mitotic checkpoint regulator).

FMR1_HUMAN
θ value	8.99809 (rank : 13)	NC score	0.018013 (rank : 15)
Query Neighborhood Hits	15	Target Neighborhood Hits	45	Shared Neighborhood Hits	3
SwissProt Accessions	Q06787, Q16578, Q99054	Gene names	FMR1
Domain Architecture
Description	Fragile X mental retardation 1 protein (Protein FMR-1) (FMRP).

LSM6_HUMAN
θ value	8.99809 (rank : 14)	NC score	0.075329 (rank : 11)
Query Neighborhood Hits	15	Target Neighborhood Hits	12	Shared Neighborhood Hits	8
SwissProt Accessions	P62312, Q9Y4Y8	Gene names	LSM6
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm6 (Sm protein F).

LSM6_MOUSE
θ value	8.99809 (rank : 15)	NC score	0.075329 (rank : 12)
Query Neighborhood Hits	15	Target Neighborhood Hits	12	Shared Neighborhood Hits	8
SwissProt Accessions	P62313, Q9Y4Y8	Gene names	Lsm6
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm6.

Hits sorted by NC score

SMD1_HUMAN
NC score	0.999962 (rank : 1)	θ value	1.51363e-47 (rank : 1)
Query Neighborhood Hits	15	Target Neighborhood Hits	15	Shared Neighborhood Hits	15
SwissProt Accessions	P62314, P13641	Gene names	SNRPD1
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) (Sm-D1) (Sm-D autoantigen).

SMD1_MOUSE
NC score	0.999962 (rank : 2)	θ value	1.51363e-47 (rank : 2)
Query Neighborhood Hits	15	Target Neighborhood Hits	15	Shared Neighborhood Hits	15
SwissProt Accessions	P62315, P13641, Q3UYM0	Gene names	Snrpd1
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) (Sm-D1) (Sm-D autoantigen).

LSM10_HUMAN
NC score	0.556776 (rank : 3)	θ value	4.92598e-06 (rank : 3)
Query Neighborhood Hits	15	Target Neighborhood Hits	11	Shared Neighborhood Hits	10
SwissProt Accessions	Q969L4	Gene names	LSM10
Domain Architecture
Description	U7 snRNA-associated Sm-like protein LSm10.

SMD3_HUMAN
NC score	0.544466 (rank : 4)	θ value	1.09739e-05 (rank : 4)
Query Neighborhood Hits	15	Target Neighborhood Hits	9	Shared Neighborhood Hits	8
SwissProt Accessions	P62318, P43331	Gene names	SNRPD3
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D3 (snRNP core protein D3) (Sm-D3).

SMD3_MOUSE
NC score	0.544466 (rank : 5)	θ value	1.09739e-05 (rank : 5)
Query Neighborhood Hits	15	Target Neighborhood Hits	9	Shared Neighborhood Hits	8
SwissProt Accessions	P62320, P43331, Q3TV81	Gene names	Snrpd3
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D3 (snRNP core protein D3) (Sm-D3).

LSM10_MOUSE
NC score	0.532352 (rank : 6)	θ value	0.00020696 (rank : 6)
Query Neighborhood Hits	15	Target Neighborhood Hits	13	Shared Neighborhood Hits	10
SwissProt Accessions	Q8QZX5	Gene names	Lsm10
Domain Architecture	No domain graphic available
Description	U7 snRNA-associated Sm-like protein LSm10.

LSM4_MOUSE
NC score	0.397742 (rank : 7)	θ value	0.0961366 (rank : 10)
Query Neighborhood Hits	15	Target Neighborhood Hits	16	Shared Neighborhood Hits	12
SwissProt Accessions	Q9QXA5	Gene names	Lsm4
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm4.

LSM4_HUMAN
NC score	0.391507 (rank : 8)	θ value	0.0736092 (rank : 9)
Query Neighborhood Hits	15	Target Neighborhood Hits	14	Shared Neighborhood Hits	12
SwissProt Accessions	Q9Y4Z0	Gene names	LSM4
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm4 (Glycine-rich protein) (GRP).

LSM2_HUMAN
NC score	0.384127 (rank : 9)	θ value	0.0113563 (rank : 7)
Query Neighborhood Hits	15	Target Neighborhood Hits	14	Shared Neighborhood Hits	10
SwissProt Accessions	Q9Y333	Gene names	LSM2, C6orf28, G7b
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm2 (snRNP core Sm-like protein Sm-x5) (Small nuclear ribonuclear protein D homolog) (Protein G7b).

LSM2_MOUSE
NC score	0.384127 (rank : 10)	θ value	0.0113563 (rank : 8)
Query Neighborhood Hits	15	Target Neighborhood Hits	14	Shared Neighborhood Hits	10
SwissProt Accessions	O35900	Gene names	Lsm2, G7b
Domain Architecture	No domain graphic available
Description	U6 snRNA-associated Sm-like protein LSm2 (snRNP core Sm-like protein Sm-x5) (Protein G7b).

LSM6_HUMAN
NC score	0.075329 (rank : 11)	θ value	8.99809 (rank : 14)
Query Neighborhood Hits	15	Target Neighborhood Hits	12	Shared Neighborhood Hits	8
SwissProt Accessions	P62312, Q9Y4Y8	Gene names	LSM6
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm6 (Sm protein F).

LSM6_MOUSE
NC score	0.075329 (rank : 12)	θ value	8.99809 (rank : 15)
Query Neighborhood Hits	15	Target Neighborhood Hits	12	Shared Neighborhood Hits	8
SwissProt Accessions	P62313, Q9Y4Y8	Gene names	Lsm6
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm6.

ANC1_MOUSE
NC score	0.053730 (rank : 13)	θ value	5.27518 (rank : 12)
Query Neighborhood Hits	15	Target Neighborhood Hits	42	Shared Neighborhood Hits	4
SwissProt Accessions	P53995, Q8BP33, Q8C772	Gene names	Anapc1, Mcpr, Tsg24
Domain Architecture	No domain graphic available
Description	Anaphase-promoting complex subunit 1 (APC1) (Cyclosome subunit 1) (Protein Tsg24) (Mitotic checkpoint regulator).

ANC1_HUMAN
NC score	0.053728 (rank : 14)	θ value	5.27518 (rank : 11)
Query Neighborhood Hits	15	Target Neighborhood Hits	46	Shared Neighborhood Hits	4
SwissProt Accessions	Q9H1A4, Q9BSE6, Q9H8D0	Gene names	ANAPC1, TSG24
Domain Architecture	No domain graphic available
Description	Anaphase-promoting complex subunit 1 (APC1) (Cyclosome subunit 1) (Protein Tsg24) (Mitotic checkpoint regulator).

FMR1_HUMAN
NC score	0.018013 (rank : 15)	θ value	8.99809 (rank : 13)
Query Neighborhood Hits	15	Target Neighborhood Hits	45	Shared Neighborhood Hits	3
SwissProt Accessions	Q06787, Q16578, Q99054	Gene names	FMR1
Domain Architecture
Description	Fragile X mental retardation 1 protein (Protein FMR-1) (FMRP).