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Network neighborhood for query Sequence : LSM6_MOUSE

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LSM6_MOUSE
SwissProt Accessions	P62313, Q9Y4Y8	Gene names	Lsm6
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm6.
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

LSM6_HUMAN
θ value	8.89434e-40 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	12	Target Neighborhood Hits	12	Shared Neighborhood Hits	12
SwissProt Accessions	P62312, Q9Y4Y8	Gene names	LSM6
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm6 (Sm protein F).

LSM6_MOUSE
θ value	8.89434e-40 (rank : 2)	NC score	0.999962 (rank : 2)
Query Neighborhood Hits	12	Target Neighborhood Hits	12	Shared Neighborhood Hits	12
SwissProt Accessions	P62313, Q9Y4Y8	Gene names	Lsm6
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm6.

RUXF_HUMAN
θ value	1.86753e-13 (rank : 3)	NC score	0.839166 (rank : 3)
Query Neighborhood Hits	12	Target Neighborhood Hits	9	Shared Neighborhood Hits	8
SwissProt Accessions	P62306, Q15356	Gene names	SNRPF, PBSCF
Domain Architecture
Description	Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF).

RUXF_MOUSE
θ value	1.86753e-13 (rank : 4)	NC score	0.839166 (rank : 4)
Query Neighborhood Hits	12	Target Neighborhood Hits	9	Shared Neighborhood Hits	8
SwissProt Accessions	P62307, Q15356	Gene names	Snrpf
Domain Architecture
Description	Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF).

RUXG_HUMAN
θ value	0.000786445 (rank : 5)	NC score	0.354878 (rank : 5)
Query Neighborhood Hits	12	Target Neighborhood Hits	18	Shared Neighborhood Hits	4
SwissProt Accessions	P62308, Q15357	Gene names	SNRPG, PBSCG
Domain Architecture
Description	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG).

RUXG_MOUSE
θ value	0.000786445 (rank : 6)	NC score	0.354878 (rank : 6)
Query Neighborhood Hits	12	Target Neighborhood Hits	18	Shared Neighborhood Hits	4
SwissProt Accessions	P62309, Q15357, Q52KC7	Gene names	Snrpg
Domain Architecture
Description	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG).

LSM2_HUMAN
θ value	0.279714 (rank : 7)	NC score	0.237488 (rank : 9)
Query Neighborhood Hits	12	Target Neighborhood Hits	14	Shared Neighborhood Hits	10
SwissProt Accessions	Q9Y333	Gene names	LSM2, C6orf28, G7b
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm2 (snRNP core Sm-like protein Sm-x5) (Small nuclear ribonuclear protein D homolog) (Protein G7b).

LSM2_MOUSE
θ value	0.279714 (rank : 8)	NC score	0.237488 (rank : 10)
Query Neighborhood Hits	12	Target Neighborhood Hits	14	Shared Neighborhood Hits	10
SwissProt Accessions	O35900	Gene names	Lsm2, G7b
Domain Architecture	No domain graphic available
Description	U6 snRNA-associated Sm-like protein LSm2 (snRNP core Sm-like protein Sm-x5) (Protein G7b).

LSM4_HUMAN
θ value	0.365318 (rank : 9)	NC score	0.256855 (rank : 7)
Query Neighborhood Hits	12	Target Neighborhood Hits	14	Shared Neighborhood Hits	10
SwissProt Accessions	Q9Y4Z0	Gene names	LSM4
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm4 (Glycine-rich protein) (GRP).

LSM4_MOUSE
θ value	0.365318 (rank : 10)	NC score	0.254426 (rank : 8)
Query Neighborhood Hits	12	Target Neighborhood Hits	16	Shared Neighborhood Hits	10
SwissProt Accessions	Q9QXA5	Gene names	Lsm4
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm4.

SMD1_HUMAN
θ value	8.99809 (rank : 11)	NC score	0.075329 (rank : 11)
Query Neighborhood Hits	12	Target Neighborhood Hits	15	Shared Neighborhood Hits	8
SwissProt Accessions	P62314, P13641	Gene names	SNRPD1
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) (Sm-D1) (Sm-D autoantigen).

SMD1_MOUSE
θ value	8.99809 (rank : 12)	NC score	0.075329 (rank : 12)
Query Neighborhood Hits	12	Target Neighborhood Hits	15	Shared Neighborhood Hits	8
SwissProt Accessions	P62315, P13641, Q3UYM0	Gene names	Snrpd1
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) (Sm-D1) (Sm-D autoantigen).

LSM10_MOUSE
θ value	θ > 10 (rank : 13)	NC score	0.053311 (rank : 15)
Query Neighborhood Hits	12	Target Neighborhood Hits	13	Shared Neighborhood Hits	8
SwissProt Accessions	Q8QZX5	Gene names	Lsm10
Domain Architecture	No domain graphic available
Description	U7 snRNA-associated Sm-like protein LSm10.

LSM7_HUMAN
θ value	θ > 10 (rank : 14)	NC score	0.066863 (rank : 13)
Query Neighborhood Hits	12	Target Neighborhood Hits	16	Shared Neighborhood Hits	2
SwissProt Accessions	Q9UK45	Gene names	LSM7
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm7.

LSM7_MOUSE
θ value	θ > 10 (rank : 15)	NC score	0.065660 (rank : 14)
Query Neighborhood Hits	12	Target Neighborhood Hits	16	Shared Neighborhood Hits	2
SwissProt Accessions	Q9CQQ8	Gene names	Lsm7
Domain Architecture	No domain graphic available
Description	U6 snRNA-associated Sm-like protein LSm7.

Hits sorted by NC score

LSM6_HUMAN
NC score	0.999962 (rank : 1)	θ value	8.89434e-40 (rank : 1)
Query Neighborhood Hits	12	Target Neighborhood Hits	12	Shared Neighborhood Hits	12
SwissProt Accessions	P62312, Q9Y4Y8	Gene names	LSM6
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm6 (Sm protein F).

LSM6_MOUSE
NC score	0.999962 (rank : 2)	θ value	8.89434e-40 (rank : 2)
Query Neighborhood Hits	12	Target Neighborhood Hits	12	Shared Neighborhood Hits	12
SwissProt Accessions	P62313, Q9Y4Y8	Gene names	Lsm6
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm6.

RUXF_HUMAN
NC score	0.839166 (rank : 3)	θ value	1.86753e-13 (rank : 3)
Query Neighborhood Hits	12	Target Neighborhood Hits	9	Shared Neighborhood Hits	8
SwissProt Accessions	P62306, Q15356	Gene names	SNRPF, PBSCF
Domain Architecture
Description	Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF).

RUXF_MOUSE
NC score	0.839166 (rank : 4)	θ value	1.86753e-13 (rank : 4)
Query Neighborhood Hits	12	Target Neighborhood Hits	9	Shared Neighborhood Hits	8
SwissProt Accessions	P62307, Q15356	Gene names	Snrpf
Domain Architecture
Description	Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF).

RUXG_HUMAN
NC score	0.354878 (rank : 5)	θ value	0.000786445 (rank : 5)
Query Neighborhood Hits	12	Target Neighborhood Hits	18	Shared Neighborhood Hits	4
SwissProt Accessions	P62308, Q15357	Gene names	SNRPG, PBSCG
Domain Architecture
Description	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG).

RUXG_MOUSE
NC score	0.354878 (rank : 6)	θ value	0.000786445 (rank : 6)
Query Neighborhood Hits	12	Target Neighborhood Hits	18	Shared Neighborhood Hits	4
SwissProt Accessions	P62309, Q15357, Q52KC7	Gene names	Snrpg
Domain Architecture
Description	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG).

LSM4_HUMAN
NC score	0.256855 (rank : 7)	θ value	0.365318 (rank : 9)
Query Neighborhood Hits	12	Target Neighborhood Hits	14	Shared Neighborhood Hits	10
SwissProt Accessions	Q9Y4Z0	Gene names	LSM4
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm4 (Glycine-rich protein) (GRP).

LSM4_MOUSE
NC score	0.254426 (rank : 8)	θ value	0.365318 (rank : 10)
Query Neighborhood Hits	12	Target Neighborhood Hits	16	Shared Neighborhood Hits	10
SwissProt Accessions	Q9QXA5	Gene names	Lsm4
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm4.

LSM2_HUMAN
NC score	0.237488 (rank : 9)	θ value	0.279714 (rank : 7)
Query Neighborhood Hits	12	Target Neighborhood Hits	14	Shared Neighborhood Hits	10
SwissProt Accessions	Q9Y333	Gene names	LSM2, C6orf28, G7b
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm2 (snRNP core Sm-like protein Sm-x5) (Small nuclear ribonuclear protein D homolog) (Protein G7b).

LSM2_MOUSE
NC score	0.237488 (rank : 10)	θ value	0.279714 (rank : 8)
Query Neighborhood Hits	12	Target Neighborhood Hits	14	Shared Neighborhood Hits	10
SwissProt Accessions	O35900	Gene names	Lsm2, G7b
Domain Architecture	No domain graphic available
Description	U6 snRNA-associated Sm-like protein LSm2 (snRNP core Sm-like protein Sm-x5) (Protein G7b).

SMD1_HUMAN
NC score	0.075329 (rank : 11)	θ value	8.99809 (rank : 11)
Query Neighborhood Hits	12	Target Neighborhood Hits	15	Shared Neighborhood Hits	8
SwissProt Accessions	P62314, P13641	Gene names	SNRPD1
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) (Sm-D1) (Sm-D autoantigen).

SMD1_MOUSE
NC score	0.075329 (rank : 12)	θ value	8.99809 (rank : 12)
Query Neighborhood Hits	12	Target Neighborhood Hits	15	Shared Neighborhood Hits	8
SwissProt Accessions	P62315, P13641, Q3UYM0	Gene names	Snrpd1
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) (Sm-D1) (Sm-D autoantigen).

LSM7_HUMAN
NC score	0.066863 (rank : 13)	θ value	θ > 10 (rank : 14)
Query Neighborhood Hits	12	Target Neighborhood Hits	16	Shared Neighborhood Hits	2
SwissProt Accessions	Q9UK45	Gene names	LSM7
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm7.

LSM7_MOUSE
NC score	0.065660 (rank : 14)	θ value	θ > 10 (rank : 15)
Query Neighborhood Hits	12	Target Neighborhood Hits	16	Shared Neighborhood Hits	2
SwissProt Accessions	Q9CQQ8	Gene names	Lsm7
Domain Architecture	No domain graphic available
Description	U6 snRNA-associated Sm-like protein LSm7.

LSM10_MOUSE
NC score	0.053311 (rank : 15)	θ value	θ > 10 (rank : 13)
Query Neighborhood Hits	12	Target Neighborhood Hits	13	Shared Neighborhood Hits	8
SwissProt Accessions	Q8QZX5	Gene names	Lsm10
Domain Architecture	No domain graphic available
Description	U7 snRNA-associated Sm-like protein LSm10.