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Network neighborhood for query Sequence : RUXF_MOUSE

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RUXF_MOUSE
 
SwissProt Accessions P62307, Q15356 Gene names Snrpf
Domain
Architecture
Description Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF).
Rank Plots



Hits sorted by θ


RUXF_HUMAN
 
θ value 2.19075e-38 (rank : 1) NC score 0.999962 (rank : 1)
Query Neighborhood Hits 9 Target Neighborhood Hits 9 Shared Neighborhood Hits 9
SwissProt Accessions P62306, Q15356 Gene names SNRPF, PBSCF
Domain
Architecture
Description Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF).
RUXF_MOUSE
 
θ value 2.19075e-38 (rank : 2) NC score 0.999962 (rank : 2)
Query Neighborhood Hits 9 Target Neighborhood Hits 9 Shared Neighborhood Hits 9
SwissProt Accessions P62307, Q15356 Gene names Snrpf
Domain
Architecture
Description Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF).
LSM6_HUMAN
 
θ value 1.86753e-13 (rank : 3) NC score 0.839166 (rank : 3)
Query Neighborhood Hits 9 Target Neighborhood Hits 12 Shared Neighborhood Hits 8
SwissProt Accessions P62312, Q9Y4Y8 Gene names LSM6
Domain
Architecture
Description U6 snRNA-associated Sm-like protein LSm6 (Sm protein F).
LSM6_MOUSE
 
θ value 1.86753e-13 (rank : 4) NC score 0.839166 (rank : 4)
Query Neighborhood Hits 9 Target Neighborhood Hits 12 Shared Neighborhood Hits 8
SwissProt Accessions P62313, Q9Y4Y8 Gene names Lsm6
Domain
Architecture
Description U6 snRNA-associated Sm-like protein LSm6.
LSM4_HUMAN
 
θ value 0.0330416 (rank : 5) NC score 0.310420 (rank : 5)
Query Neighborhood Hits 9 Target Neighborhood Hits 14 Shared Neighborhood Hits 9
SwissProt Accessions Q9Y4Z0 Gene names LSM4
Domain
Architecture
Description U6 snRNA-associated Sm-like protein LSm4 (Glycine-rich protein) (GRP).
LSM4_MOUSE
 
θ value 0.0330416 (rank : 6) NC score 0.306377 (rank : 6)
Query Neighborhood Hits 9 Target Neighborhood Hits 16 Shared Neighborhood Hits 9
SwissProt Accessions Q9QXA5 Gene names Lsm4
Domain
Architecture
Description U6 snRNA-associated Sm-like protein LSm4.
LSM2_HUMAN
 
θ value 1.81305 (rank : 7) NC score 0.204772 (rank : 7)
Query Neighborhood Hits 9 Target Neighborhood Hits 14 Shared Neighborhood Hits 9
SwissProt Accessions Q9Y333 Gene names LSM2, C6orf28, G7b
Domain
Architecture
Description U6 snRNA-associated Sm-like protein LSm2 (snRNP core Sm-like protein Sm-x5) (Small nuclear ribonuclear protein D homolog) (Protein G7b).
LSM2_MOUSE
 
θ value 1.81305 (rank : 8) NC score 0.204772 (rank : 8)
Query Neighborhood Hits 9 Target Neighborhood Hits 14 Shared Neighborhood Hits 9
SwissProt Accessions O35900 Gene names Lsm2, G7b
Domain
Architecture

No domain graphic available

Description U6 snRNA-associated Sm-like protein LSm2 (snRNP core Sm-like protein Sm-x5) (Protein G7b).
LSM10_MOUSE
 
θ value 8.99809 (rank : 9) NC score 0.069807 (rank : 11)
Query Neighborhood Hits 9 Target Neighborhood Hits 13 Shared Neighborhood Hits 7
SwissProt Accessions Q8QZX5 Gene names Lsm10
Domain
Architecture

No domain graphic available

Description U7 snRNA-associated Sm-like protein LSm10.
LSM10_HUMAN
 
θ value θ > 10 (rank : 10) NC score 0.053201 (rank : 12)
Query Neighborhood Hits 9 Target Neighborhood Hits 11 Shared Neighborhood Hits 5
SwissProt Accessions Q969L4 Gene names LSM10
Domain
Architecture
Description U7 snRNA-associated Sm-like protein LSm10.
RUXG_HUMAN
 
θ value θ > 10 (rank : 11) NC score 0.104217 (rank : 9)
Query Neighborhood Hits 9 Target Neighborhood Hits 18 Shared Neighborhood Hits 2
SwissProt Accessions P62308, Q15357 Gene names SNRPG, PBSCG
Domain
Architecture
Description Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG).
RUXG_MOUSE
 
θ value θ > 10 (rank : 12) NC score 0.104217 (rank : 10)
Query Neighborhood Hits 9 Target Neighborhood Hits 18 Shared Neighborhood Hits 2
SwissProt Accessions P62309, Q15357, Q52KC7 Gene names Snrpg
Domain
Architecture
Description Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG).

Hits sorted by NC score


RUXF_HUMAN
 
NC score 0.999962 (rank : 1) θ value 2.19075e-38 (rank : 1)
Query Neighborhood Hits 9 Target Neighborhood Hits 9 Shared Neighborhood Hits 9
SwissProt Accessions P62306, Q15356 Gene names SNRPF, PBSCF
Domain
Architecture
Description Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF).
RUXF_MOUSE
 
NC score 0.999962 (rank : 2) θ value 2.19075e-38 (rank : 2)
Query Neighborhood Hits 9 Target Neighborhood Hits 9 Shared Neighborhood Hits 9
SwissProt Accessions P62307, Q15356 Gene names Snrpf
Domain
Architecture
Description Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF).
LSM6_HUMAN
 
NC score 0.839166 (rank : 3) θ value 1.86753e-13 (rank : 3)
Query Neighborhood Hits 9 Target Neighborhood Hits 12 Shared Neighborhood Hits 8
SwissProt Accessions P62312, Q9Y4Y8 Gene names LSM6
Domain
Architecture
Description U6 snRNA-associated Sm-like protein LSm6 (Sm protein F).
LSM6_MOUSE
 
NC score 0.839166 (rank : 4) θ value 1.86753e-13 (rank : 4)
Query Neighborhood Hits 9 Target Neighborhood Hits 12 Shared Neighborhood Hits 8
SwissProt Accessions P62313, Q9Y4Y8 Gene names Lsm6
Domain
Architecture
Description U6 snRNA-associated Sm-like protein LSm6.
LSM4_HUMAN
 
NC score 0.310420 (rank : 5) θ value 0.0330416 (rank : 5)
Query Neighborhood Hits 9 Target Neighborhood Hits 14 Shared Neighborhood Hits 9
SwissProt Accessions Q9Y4Z0 Gene names LSM4
Domain
Architecture
Description U6 snRNA-associated Sm-like protein LSm4 (Glycine-rich protein) (GRP).
LSM4_MOUSE
 
NC score 0.306377 (rank : 6) θ value 0.0330416 (rank : 6)
Query Neighborhood Hits 9 Target Neighborhood Hits 16 Shared Neighborhood Hits 9
SwissProt Accessions Q9QXA5 Gene names Lsm4
Domain
Architecture
Description U6 snRNA-associated Sm-like protein LSm4.
LSM2_HUMAN
 
NC score 0.204772 (rank : 7) θ value 1.81305 (rank : 7)
Query Neighborhood Hits 9 Target Neighborhood Hits 14 Shared Neighborhood Hits 9
SwissProt Accessions Q9Y333 Gene names LSM2, C6orf28, G7b
Domain
Architecture
Description U6 snRNA-associated Sm-like protein LSm2 (snRNP core Sm-like protein Sm-x5) (Small nuclear ribonuclear protein D homolog) (Protein G7b).
LSM2_MOUSE
 
NC score 0.204772 (rank : 8) θ value 1.81305 (rank : 8)
Query Neighborhood Hits 9 Target Neighborhood Hits 14 Shared Neighborhood Hits 9
SwissProt Accessions O35900 Gene names Lsm2, G7b
Domain
Architecture

No domain graphic available

Description U6 snRNA-associated Sm-like protein LSm2 (snRNP core Sm-like protein Sm-x5) (Protein G7b).
RUXG_HUMAN
 
NC score 0.104217 (rank : 9) θ value θ > 10 (rank : 11)
Query Neighborhood Hits 9 Target Neighborhood Hits 18 Shared Neighborhood Hits 2
SwissProt Accessions P62308, Q15357 Gene names SNRPG, PBSCG
Domain
Architecture
Description Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG).
RUXG_MOUSE
 
NC score 0.104217 (rank : 10) θ value θ > 10 (rank : 12)
Query Neighborhood Hits 9 Target Neighborhood Hits 18 Shared Neighborhood Hits 2
SwissProt Accessions P62309, Q15357, Q52KC7 Gene names Snrpg
Domain
Architecture
Description Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG).
LSM10_MOUSE
 
NC score 0.069807 (rank : 11) θ value 8.99809 (rank : 9)
Query Neighborhood Hits 9 Target Neighborhood Hits 13 Shared Neighborhood Hits 7
SwissProt Accessions Q8QZX5 Gene names Lsm10
Domain
Architecture

No domain graphic available

Description U7 snRNA-associated Sm-like protein LSm10.
LSM10_HUMAN
 
NC score 0.053201 (rank : 12) θ value θ > 10 (rank : 10)
Query Neighborhood Hits 9 Target Neighborhood Hits 11 Shared Neighborhood Hits 5
SwissProt Accessions Q969L4 Gene names LSM10
Domain
Architecture
Description U7 snRNA-associated Sm-like protein LSm10.