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Network neighborhood for query Sequence : DDB1_HUMAN

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DDB1_HUMAN
SwissProt Accessions	Q16531, O15176, Q13289, Q58F96	Gene names	DDB1
Domain Architecture
Description	DNA damage-binding protein 1 (Damage-specific DNA-binding protein 1) (UV-damaged DNA-binding factor) (DDB p127 subunit) (DDBa) (UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma pigmentosum group E- complementing protein) (XPCe) (XPE-binding factor) (XPE-BF) (X- associated protein 1) (XAP-1).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

DDB1_HUMAN
θ value	0 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	15	Target Neighborhood Hits	15	Shared Neighborhood Hits	15
SwissProt Accessions	Q16531, O15176, Q13289, Q58F96	Gene names	DDB1
Domain Architecture
Description	DNA damage-binding protein 1 (Damage-specific DNA-binding protein 1) (UV-damaged DNA-binding factor) (DDB p127 subunit) (DDBa) (UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma pigmentosum group E- complementing protein) (XPCe) (XPE-binding factor) (XPE-BF) (X- associated protein 1) (XAP-1).

SF3B3_HUMAN
θ value	6.34462e-54 (rank : 2)	NC score	0.772589 (rank : 2)
Query Neighborhood Hits	15	Target Neighborhood Hits	19	Shared Neighborhood Hits	5
SwissProt Accessions	Q15393, Q9UJ29	Gene names	SF3B3, KIAA0017, SAP130
Domain Architecture
Description	Splicing factor 3B subunit 3 (Spliceosome-associated protein 130) (SAP 130) (SF3b130) (Pre-mRNA-splicing factor SF3b 130 kDa subunit) (STAF130).

CPSF1_HUMAN
θ value	1.80466e-16 (rank : 3)	NC score	0.500752 (rank : 3)
Query Neighborhood Hits	15	Target Neighborhood Hits	22	Shared Neighborhood Hits	5
SwissProt Accessions	Q10570, Q96AF0	Gene names	CPSF1, CPSF160
Domain Architecture
Description	Cleavage and polyadenylation specificity factor 160 kDa subunit (CPSF 160 kDa subunit).

CPSF1_MOUSE
θ value	8.95645e-16 (rank : 4)	NC score	0.496676 (rank : 4)
Query Neighborhood Hits	15	Target Neighborhood Hits	22	Shared Neighborhood Hits	4
SwissProt Accessions	Q9EPU4	Gene names	Cpsf1, Cpsf160
Domain Architecture
Description	Cleavage and polyadenylation specificity factor 160 kDa subunit (CPSF 160 kDa subunit).

AT1B3_MOUSE
θ value	1.38821 (rank : 5)	NC score	0.030898 (rank : 5)
Query Neighborhood Hits	15	Target Neighborhood Hits	13	Shared Neighborhood Hits	2
SwissProt Accessions	P97370	Gene names	Atp1b3
Domain Architecture
Description	Sodium/potassium-transporting ATPase subunit beta-3 (Sodium/potassium- dependent ATPase beta-3 subunit) (ATPB-3) (CD298 antigen).

LIS1_HUMAN
θ value	1.81305 (rank : 6)	NC score	0.016385 (rank : 6)
Query Neighborhood Hits	15	Target Neighborhood Hits	333	Shared Neighborhood Hits	3
SwissProt Accessions	P43034, Q8WZ88, Q8WZ89	Gene names	PAFAH1B1, LIS1, MDCR, PAFAHA
Domain Architecture
Description	Platelet-activating factor acetylhydrolase IB subunit alpha (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1).

LIS1_MOUSE
θ value	1.81305 (rank : 7)	NC score	0.016383 (rank : 7)
Query Neighborhood Hits	15	Target Neighborhood Hits	336	Shared Neighborhood Hits	3
SwissProt Accessions	P63005, O35592, P43035, P81692, Q9R2A6	Gene names	Pafah1b1, Lis-1, Lis1, Pafaha
Domain Architecture	No domain graphic available
Description	Platelet-activating factor acetylhydrolase IB subunit alpha (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1).

PREX1_HUMAN
θ value	4.03905 (rank : 8)	NC score	0.013851 (rank : 10)
Query Neighborhood Hits	15	Target Neighborhood Hits	177	Shared Neighborhood Hits	2
SwissProt Accessions	Q8TCU6, Q5JS95, Q5JS96, Q69YL2, Q7Z2L9, Q9BQH0, Q9BX55, Q9H4Q6, Q9P2D2, Q9UGQ4	Gene names	PREX1, KIAA1415
Domain Architecture
Description	Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein (P-Rex1 protein).

CNTP4_HUMAN
θ value	5.27518 (rank : 9)	NC score	0.010454 (rank : 14)
Query Neighborhood Hits	15	Target Neighborhood Hits	187	Shared Neighborhood Hits	2
SwissProt Accessions	Q9C0A0	Gene names	CNTNAP4, CASPR4, KIAA1763
Domain Architecture
Description	Contactin-associated protein-like 4 precursor (Cell recognition molecule Caspr4).

KIF25_HUMAN
θ value	6.88961 (rank : 10)	NC score	0.011972 (rank : 12)
Query Neighborhood Hits	15	Target Neighborhood Hits	62	Shared Neighborhood Hits	3
SwissProt Accessions	Q9UIL4, O94775	Gene names	KIF25, KNSL3
Domain Architecture
Description	Kinesin-like protein KIF25 (Kinesin-like protein 3).

PGM2L_MOUSE
θ value	6.88961 (rank : 11)	NC score	0.015652 (rank : 8)
Query Neighborhood Hits	15	Target Neighborhood Hits	11	Shared Neighborhood Hits	2
SwissProt Accessions	Q8CAA7	Gene names	Pgm2l1
Domain Architecture	No domain graphic available
Description	Phosphoglucomutase-2-like 1 (EC 5.4.2.2).

MARK3_MOUSE
θ value	8.99809 (rank : 12)	NC score	0.000447 (rank : 15)
Query Neighborhood Hits	15	Target Neighborhood Hits	919	Shared Neighborhood Hits	2
SwissProt Accessions	Q03141, Q3TM40, Q3V1U3, Q8C6G9, Q8R375, Q9JKE4	Gene names	Mark3, Emk2, Mpk10
Domain Architecture	No domain graphic available
Description	MAP/microtubule affinity-regulating kinase 3 (EC 2.7.11.1) (MPK-10) (ELKL motif kinase 2).

MPPB_HUMAN
θ value	8.99809 (rank : 13)	NC score	0.011657 (rank : 13)
Query Neighborhood Hits	15	Target Neighborhood Hits	20	Shared Neighborhood Hits	2
SwissProt Accessions	O75439, O60416, Q96FV4	Gene names	PMPCB, MPPB
Domain Architecture
Description	Mitochondrial-processing peptidase subunit beta, mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52).

PKNX2_HUMAN
θ value	8.99809 (rank : 14)	NC score	0.014996 (rank : 9)
Query Neighborhood Hits	15	Target Neighborhood Hits	133	Shared Neighborhood Hits	4
SwissProt Accessions	Q96KN3, Q63HL6, Q86XD1	Gene names	PKNOX2, PREP2
Domain Architecture
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

PKNX2_MOUSE
θ value	8.99809 (rank : 15)	NC score	0.012842 (rank : 11)
Query Neighborhood Hits	15	Target Neighborhood Hits	197	Shared Neighborhood Hits	3
SwissProt Accessions	Q8BG99, Q8R4B0	Gene names	Pknox2, Prep2
Domain Architecture	No domain graphic available
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

Hits sorted by NC score

DDB1_HUMAN
NC score	0.999962 (rank : 1)	θ value	0 (rank : 1)
Query Neighborhood Hits	15	Target Neighborhood Hits	15	Shared Neighborhood Hits	15
SwissProt Accessions	Q16531, O15176, Q13289, Q58F96	Gene names	DDB1
Domain Architecture
Description	DNA damage-binding protein 1 (Damage-specific DNA-binding protein 1) (UV-damaged DNA-binding factor) (DDB p127 subunit) (DDBa) (UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma pigmentosum group E- complementing protein) (XPCe) (XPE-binding factor) (XPE-BF) (X- associated protein 1) (XAP-1).

SF3B3_HUMAN
NC score	0.772589 (rank : 2)	θ value	6.34462e-54 (rank : 2)
Query Neighborhood Hits	15	Target Neighborhood Hits	19	Shared Neighborhood Hits	5
SwissProt Accessions	Q15393, Q9UJ29	Gene names	SF3B3, KIAA0017, SAP130
Domain Architecture
Description	Splicing factor 3B subunit 3 (Spliceosome-associated protein 130) (SAP 130) (SF3b130) (Pre-mRNA-splicing factor SF3b 130 kDa subunit) (STAF130).

CPSF1_HUMAN
NC score	0.500752 (rank : 3)	θ value	1.80466e-16 (rank : 3)
Query Neighborhood Hits	15	Target Neighborhood Hits	22	Shared Neighborhood Hits	5
SwissProt Accessions	Q10570, Q96AF0	Gene names	CPSF1, CPSF160
Domain Architecture
Description	Cleavage and polyadenylation specificity factor 160 kDa subunit (CPSF 160 kDa subunit).

CPSF1_MOUSE
NC score	0.496676 (rank : 4)	θ value	8.95645e-16 (rank : 4)
Query Neighborhood Hits	15	Target Neighborhood Hits	22	Shared Neighborhood Hits	4
SwissProt Accessions	Q9EPU4	Gene names	Cpsf1, Cpsf160
Domain Architecture
Description	Cleavage and polyadenylation specificity factor 160 kDa subunit (CPSF 160 kDa subunit).

AT1B3_MOUSE
NC score	0.030898 (rank : 5)	θ value	1.38821 (rank : 5)
Query Neighborhood Hits	15	Target Neighborhood Hits	13	Shared Neighborhood Hits	2
SwissProt Accessions	P97370	Gene names	Atp1b3
Domain Architecture
Description	Sodium/potassium-transporting ATPase subunit beta-3 (Sodium/potassium- dependent ATPase beta-3 subunit) (ATPB-3) (CD298 antigen).

LIS1_HUMAN
NC score	0.016385 (rank : 6)	θ value	1.81305 (rank : 6)
Query Neighborhood Hits	15	Target Neighborhood Hits	333	Shared Neighborhood Hits	3
SwissProt Accessions	P43034, Q8WZ88, Q8WZ89	Gene names	PAFAH1B1, LIS1, MDCR, PAFAHA
Domain Architecture
Description	Platelet-activating factor acetylhydrolase IB subunit alpha (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1).

LIS1_MOUSE
NC score	0.016383 (rank : 7)	θ value	1.81305 (rank : 7)
Query Neighborhood Hits	15	Target Neighborhood Hits	336	Shared Neighborhood Hits	3
SwissProt Accessions	P63005, O35592, P43035, P81692, Q9R2A6	Gene names	Pafah1b1, Lis-1, Lis1, Pafaha
Domain Architecture	No domain graphic available
Description	Platelet-activating factor acetylhydrolase IB subunit alpha (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1).

PGM2L_MOUSE
NC score	0.015652 (rank : 8)	θ value	6.88961 (rank : 11)
Query Neighborhood Hits	15	Target Neighborhood Hits	11	Shared Neighborhood Hits	2
SwissProt Accessions	Q8CAA7	Gene names	Pgm2l1
Domain Architecture	No domain graphic available
Description	Phosphoglucomutase-2-like 1 (EC 5.4.2.2).

PKNX2_HUMAN
NC score	0.014996 (rank : 9)	θ value	8.99809 (rank : 14)
Query Neighborhood Hits	15	Target Neighborhood Hits	133	Shared Neighborhood Hits	4
SwissProt Accessions	Q96KN3, Q63HL6, Q86XD1	Gene names	PKNOX2, PREP2
Domain Architecture
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

PREX1_HUMAN
NC score	0.013851 (rank : 10)	θ value	4.03905 (rank : 8)
Query Neighborhood Hits	15	Target Neighborhood Hits	177	Shared Neighborhood Hits	2
SwissProt Accessions	Q8TCU6, Q5JS95, Q5JS96, Q69YL2, Q7Z2L9, Q9BQH0, Q9BX55, Q9H4Q6, Q9P2D2, Q9UGQ4	Gene names	PREX1, KIAA1415
Domain Architecture
Description	Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein (P-Rex1 protein).

PKNX2_MOUSE
NC score	0.012842 (rank : 11)	θ value	8.99809 (rank : 15)
Query Neighborhood Hits	15	Target Neighborhood Hits	197	Shared Neighborhood Hits	3
SwissProt Accessions	Q8BG99, Q8R4B0	Gene names	Pknox2, Prep2
Domain Architecture	No domain graphic available
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

KIF25_HUMAN
NC score	0.011972 (rank : 12)	θ value	6.88961 (rank : 10)
Query Neighborhood Hits	15	Target Neighborhood Hits	62	Shared Neighborhood Hits	3
SwissProt Accessions	Q9UIL4, O94775	Gene names	KIF25, KNSL3
Domain Architecture
Description	Kinesin-like protein KIF25 (Kinesin-like protein 3).

MPPB_HUMAN
NC score	0.011657 (rank : 13)	θ value	8.99809 (rank : 13)
Query Neighborhood Hits	15	Target Neighborhood Hits	20	Shared Neighborhood Hits	2
SwissProt Accessions	O75439, O60416, Q96FV4	Gene names	PMPCB, MPPB
Domain Architecture
Description	Mitochondrial-processing peptidase subunit beta, mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52).

CNTP4_HUMAN
NC score	0.010454 (rank : 14)	θ value	5.27518 (rank : 9)
Query Neighborhood Hits	15	Target Neighborhood Hits	187	Shared Neighborhood Hits	2
SwissProt Accessions	Q9C0A0	Gene names	CNTNAP4, CASPR4, KIAA1763
Domain Architecture
Description	Contactin-associated protein-like 4 precursor (Cell recognition molecule Caspr4).

MARK3_MOUSE
NC score	0.000447 (rank : 15)	θ value	8.99809 (rank : 12)
Query Neighborhood Hits	15	Target Neighborhood Hits	919	Shared Neighborhood Hits	2
SwissProt Accessions	Q03141, Q3TM40, Q3V1U3, Q8C6G9, Q8R375, Q9JKE4	Gene names	Mark3, Emk2, Mpk10
Domain Architecture	No domain graphic available
Description	MAP/microtubule affinity-regulating kinase 3 (EC 2.7.11.1) (MPK-10) (ELKL motif kinase 2).