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Network neighborhood for query Sequence : TRAT1_HUMAN

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TRAT1_HUMAN
SwissProt Accessions	Q6PIZ9, Q9NZX5	Gene names	TRAT1, TCRIM
Domain Architecture	No domain graphic available
Description	T-cell receptor-associated transmembrane adapter 1 (T-cell receptor- interacting molecule) (TRIM) (pp29/30).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

TRAT1_HUMAN
θ value	6.06035e-97 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	12	Target Neighborhood Hits	12	Shared Neighborhood Hits	12
SwissProt Accessions	Q6PIZ9, Q9NZX5	Gene names	TRAT1, TCRIM
Domain Architecture	No domain graphic available
Description	T-cell receptor-associated transmembrane adapter 1 (T-cell receptor- interacting molecule) (TRIM) (pp29/30).

TRAT1_MOUSE
θ value	7.2256e-66 (rank : 2)	NC score	0.986810 (rank : 2)
Query Neighborhood Hits	12	Target Neighborhood Hits	4	Shared Neighborhood Hits	3
SwissProt Accessions	Q3UU67, Q3SXD9, Q3SXE0	Gene names	Trat1
Domain Architecture	No domain graphic available
Description	T-cell receptor-associated transmembrane adapter 1 (T-cell receptor- interacting molecule) (TRIM).

NIBL_HUMAN
θ value	1.81305 (rank : 3)	NC score	0.040573 (rank : 6)
Query Neighborhood Hits	12	Target Neighborhood Hits	61	Shared Neighborhood Hits	2
SwissProt Accessions	Q96TA1, Q9BUS2, Q9NT35	Gene names	C9orf88
Domain Architecture	No domain graphic available
Description	Niban-like protein (Meg-3).

ZCHC6_MOUSE
θ value	1.81305 (rank : 4)	NC score	0.051249 (rank : 4)
Query Neighborhood Hits	12	Target Neighborhood Hits	90	Shared Neighborhood Hits	3
SwissProt Accessions	Q5BLK4, Q8CIH3	Gene names	Zcchc6
Domain Architecture	No domain graphic available
Description	Zinc finger CCHC domain-containing protein 6.

PITX1_HUMAN
θ value	5.27518 (rank : 5)	NC score	0.018990 (rank : 8)
Query Neighborhood Hits	12	Target Neighborhood Hits	353	Shared Neighborhood Hits	5
SwissProt Accessions	P78337, O14677, O60425, Q9BTI5	Gene names	PITX1, BFT, PTX1
Domain Architecture
Description	Pituitary homeobox 1 (Hindlimb expressed homeobox protein backfoot).

PITX1_MOUSE
θ value	5.27518 (rank : 6)	NC score	0.019007 (rank : 7)
Query Neighborhood Hits	12	Target Neighborhood Hits	362	Shared Neighborhood Hits	5
SwissProt Accessions	P70314, O54742, P70427	Gene names	Pitx1, Bft, Potx, Ptx1
Domain Architecture
Description	Pituitary homeobox 1 (Homeobox protein P-OTX) (Pituitary OTX-related factor) (Hindlimb expressed homeobox protein backfoot) (Ptx1).

ZCHC6_HUMAN
θ value	5.27518 (rank : 7)	NC score	0.045372 (rank : 5)
Query Neighborhood Hits	12	Target Neighborhood Hits	142	Shared Neighborhood Hits	3
SwissProt Accessions	Q5VYS8, Q5H9T0, Q5VYS5, Q5VYS7, Q658Z9, Q659A2, Q6MZJ3, Q8N5F0, Q96N57, Q96NE8, Q9C0F2, Q9H8M6	Gene names	ZCCHC6, KIAA1711
Domain Architecture	No domain graphic available
Description	Zinc finger CCHC domain-containing protein 6.

SIT1_HUMAN
θ value	6.88961 (rank : 8)	NC score	0.067837 (rank : 3)
Query Neighborhood Hits	12	Target Neighborhood Hits	17	Shared Neighborhood Hits	3
SwissProt Accessions	Q9Y3P8	Gene names	SIT1, SIT
Domain Architecture	No domain graphic available
Description	Signaling threshold-regulating transmembrane adapter 1 precursor (Suppression-inducing transmembrane adapter 1) (SHP2-interacting transmembrane adapter protein) (gp30/40).

WDR61_HUMAN
θ value	6.88961 (rank : 9)	NC score	0.011799 (rank : 12)
Query Neighborhood Hits	12	Target Neighborhood Hits	334	Shared Neighborhood Hits	3
SwissProt Accessions	Q9GZS3, Q6IA22, Q7Z4X4	Gene names	WDR61
Domain Architecture	No domain graphic available
Description	WD repeat protein 61 (Meiotic recombination REC14 protein homolog).

WDR61_MOUSE
θ value	6.88961 (rank : 10)	NC score	0.011817 (rank : 11)
Query Neighborhood Hits	12	Target Neighborhood Hits	331	Shared Neighborhood Hits	3
SwissProt Accessions	Q9ERF3, Q3U562, Q9CZP1	Gene names	Wdr61
Domain Architecture	No domain graphic available
Description	WD repeat protein 61 (Meiotic recombination REC14 protein homolog).

PITX2_HUMAN
θ value	8.99809 (rank : 11)	NC score	0.016585 (rank : 9)
Query Neighborhood Hits	12	Target Neighborhood Hits	381	Shared Neighborhood Hits	5
SwissProt Accessions	Q99697, O60578, O60579, O60580, Q9BY17	Gene names	PITX2, ARP1, RGS, RIEG, RIEG1
Domain Architecture
Description	Pituitary homeobox 2 (RIEG bicoid-related homeobox transcription factor) (Solurshin) (ALL1-responsive protein ARP1).

PITX2_MOUSE
θ value	8.99809 (rank : 12)	NC score	0.016515 (rank : 10)
Query Neighborhood Hits	12	Target Neighborhood Hits	383	Shared Neighborhood Hits	5
SwissProt Accessions	P97474, O08646, O70336, P97933, Q9JLA0, Q9QXB8, Q9R1V9, Q9Z141	Gene names	Pitx2, Arp1, Brx1, Otlx2, Ptx2, Rgs
Domain Architecture
Description	Pituitary homeobox 2 (Orthodenticle-like homeobox 2) (Solurshin) (ALL1-responsive protein ARP1) (BRX1 homeoprotein) (Paired-like homeodomain transcription factor Munc 30).

Hits sorted by NC score

TRAT1_HUMAN
NC score	0.999962 (rank : 1)	θ value	6.06035e-97 (rank : 1)
Query Neighborhood Hits	12	Target Neighborhood Hits	12	Shared Neighborhood Hits	12
SwissProt Accessions	Q6PIZ9, Q9NZX5	Gene names	TRAT1, TCRIM
Domain Architecture	No domain graphic available
Description	T-cell receptor-associated transmembrane adapter 1 (T-cell receptor- interacting molecule) (TRIM) (pp29/30).

TRAT1_MOUSE
NC score	0.986810 (rank : 2)	θ value	7.2256e-66 (rank : 2)
Query Neighborhood Hits	12	Target Neighborhood Hits	4	Shared Neighborhood Hits	3
SwissProt Accessions	Q3UU67, Q3SXD9, Q3SXE0	Gene names	Trat1
Domain Architecture	No domain graphic available
Description	T-cell receptor-associated transmembrane adapter 1 (T-cell receptor- interacting molecule) (TRIM).

SIT1_HUMAN
NC score	0.067837 (rank : 3)	θ value	6.88961 (rank : 8)
Query Neighborhood Hits	12	Target Neighborhood Hits	17	Shared Neighborhood Hits	3
SwissProt Accessions	Q9Y3P8	Gene names	SIT1, SIT
Domain Architecture	No domain graphic available
Description	Signaling threshold-regulating transmembrane adapter 1 precursor (Suppression-inducing transmembrane adapter 1) (SHP2-interacting transmembrane adapter protein) (gp30/40).

ZCHC6_MOUSE
NC score	0.051249 (rank : 4)	θ value	1.81305 (rank : 4)
Query Neighborhood Hits	12	Target Neighborhood Hits	90	Shared Neighborhood Hits	3
SwissProt Accessions	Q5BLK4, Q8CIH3	Gene names	Zcchc6
Domain Architecture	No domain graphic available
Description	Zinc finger CCHC domain-containing protein 6.

ZCHC6_HUMAN
NC score	0.045372 (rank : 5)	θ value	5.27518 (rank : 7)
Query Neighborhood Hits	12	Target Neighborhood Hits	142	Shared Neighborhood Hits	3
SwissProt Accessions	Q5VYS8, Q5H9T0, Q5VYS5, Q5VYS7, Q658Z9, Q659A2, Q6MZJ3, Q8N5F0, Q96N57, Q96NE8, Q9C0F2, Q9H8M6	Gene names	ZCCHC6, KIAA1711
Domain Architecture	No domain graphic available
Description	Zinc finger CCHC domain-containing protein 6.

NIBL_HUMAN
NC score	0.040573 (rank : 6)	θ value	1.81305 (rank : 3)
Query Neighborhood Hits	12	Target Neighborhood Hits	61	Shared Neighborhood Hits	2
SwissProt Accessions	Q96TA1, Q9BUS2, Q9NT35	Gene names	C9orf88
Domain Architecture	No domain graphic available
Description	Niban-like protein (Meg-3).

PITX1_MOUSE
NC score	0.019007 (rank : 7)	θ value	5.27518 (rank : 6)
Query Neighborhood Hits	12	Target Neighborhood Hits	362	Shared Neighborhood Hits	5
SwissProt Accessions	P70314, O54742, P70427	Gene names	Pitx1, Bft, Potx, Ptx1
Domain Architecture
Description	Pituitary homeobox 1 (Homeobox protein P-OTX) (Pituitary OTX-related factor) (Hindlimb expressed homeobox protein backfoot) (Ptx1).

PITX1_HUMAN
NC score	0.018990 (rank : 8)	θ value	5.27518 (rank : 5)
Query Neighborhood Hits	12	Target Neighborhood Hits	353	Shared Neighborhood Hits	5
SwissProt Accessions	P78337, O14677, O60425, Q9BTI5	Gene names	PITX1, BFT, PTX1
Domain Architecture
Description	Pituitary homeobox 1 (Hindlimb expressed homeobox protein backfoot).

PITX2_HUMAN
NC score	0.016585 (rank : 9)	θ value	8.99809 (rank : 11)
Query Neighborhood Hits	12	Target Neighborhood Hits	381	Shared Neighborhood Hits	5
SwissProt Accessions	Q99697, O60578, O60579, O60580, Q9BY17	Gene names	PITX2, ARP1, RGS, RIEG, RIEG1
Domain Architecture
Description	Pituitary homeobox 2 (RIEG bicoid-related homeobox transcription factor) (Solurshin) (ALL1-responsive protein ARP1).

PITX2_MOUSE
NC score	0.016515 (rank : 10)	θ value	8.99809 (rank : 12)
Query Neighborhood Hits	12	Target Neighborhood Hits	383	Shared Neighborhood Hits	5
SwissProt Accessions	P97474, O08646, O70336, P97933, Q9JLA0, Q9QXB8, Q9R1V9, Q9Z141	Gene names	Pitx2, Arp1, Brx1, Otlx2, Ptx2, Rgs
Domain Architecture
Description	Pituitary homeobox 2 (Orthodenticle-like homeobox 2) (Solurshin) (ALL1-responsive protein ARP1) (BRX1 homeoprotein) (Paired-like homeodomain transcription factor Munc 30).

WDR61_MOUSE
NC score	0.011817 (rank : 11)	θ value	6.88961 (rank : 10)
Query Neighborhood Hits	12	Target Neighborhood Hits	331	Shared Neighborhood Hits	3
SwissProt Accessions	Q9ERF3, Q3U562, Q9CZP1	Gene names	Wdr61
Domain Architecture	No domain graphic available
Description	WD repeat protein 61 (Meiotic recombination REC14 protein homolog).

WDR61_HUMAN
NC score	0.011799 (rank : 12)	θ value	6.88961 (rank : 9)
Query Neighborhood Hits	12	Target Neighborhood Hits	334	Shared Neighborhood Hits	3
SwissProt Accessions	Q9GZS3, Q6IA22, Q7Z4X4	Gene names	WDR61
Domain Architecture	No domain graphic available
Description	WD repeat protein 61 (Meiotic recombination REC14 protein homolog).