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Network neighborhood for query Sequence : RRFM_HUMAN

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RRFM_HUMAN
SwissProt Accessions	Q96E11, Q5RKT1, Q5T7T0, Q5T7T1, Q5T7T2, Q5T7T3, Q5T7T4, Q5T7T5	Gene names	MRRF
Domain Architecture	No domain graphic available
Description	Ribosome recycling factor, mitochondrial precursor.
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

RRFM_HUMAN
θ value	1.02182e-136 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	18	Target Neighborhood Hits	18	Shared Neighborhood Hits	18
SwissProt Accessions	Q96E11, Q5RKT1, Q5T7T0, Q5T7T1, Q5T7T2, Q5T7T3, Q5T7T4, Q5T7T5	Gene names	MRRF
Domain Architecture	No domain graphic available
Description	Ribosome recycling factor, mitochondrial precursor.

RRFM_MOUSE
θ value	4.03687e-117 (rank : 2)	NC score	0.986739 (rank : 2)
Query Neighborhood Hits	18	Target Neighborhood Hits	20	Shared Neighborhood Hits	7
SwissProt Accessions	Q9D6S7	Gene names	Mrrf
Domain Architecture	No domain graphic available
Description	Ribosome recycling factor, mitochondrial precursor.

GNDS_HUMAN
θ value	0.279714 (rank : 3)	NC score	0.040032 (rank : 6)
Query Neighborhood Hits	18	Target Neighborhood Hits	201	Shared Neighborhood Hits	2
SwissProt Accessions	Q12967, Q9HAX7, Q9HAY1, Q9HCT1	Gene names	RALGDS, RGF
Domain Architecture
Description	Ral guanine nucleotide dissociation stimulator (RalGEF) (RalGDS).

LAMA2_HUMAN
θ value	0.279714 (rank : 4)	NC score	0.026749 (rank : 8)
Query Neighborhood Hits	18	Target Neighborhood Hits	1092	Shared Neighborhood Hits	7
SwissProt Accessions	P24043, Q14736, Q93022	Gene names	LAMA2, LAMM
Domain Architecture
Description	Laminin alpha-2 chain precursor (Laminin M chain) (Merosin heavy chain).

CI039_HUMAN
θ value	0.62314 (rank : 5)	NC score	0.023792 (rank : 12)
Query Neighborhood Hits	18	Target Neighborhood Hits	1171	Shared Neighborhood Hits	9
SwissProt Accessions	Q9NXG0, Q5VYJ0, Q9HAJ5	Gene names	C9orf39
Domain Architecture	No domain graphic available
Description	Protein C9orf39.

CENPQ_MOUSE
θ value	1.06291 (rank : 6)	NC score	0.053400 (rank : 4)
Query Neighborhood Hits	18	Target Neighborhood Hits	160	Shared Neighborhood Hits	4
SwissProt Accessions	Q9CPQ5, Q8C2G4, Q8VEF8, Q9CX70	Gene names	Cenpq
Domain Architecture	No domain graphic available
Description	Centromere protein Q (CENP-Q).

FBX18_HUMAN
θ value	1.06291 (rank : 7)	NC score	0.045698 (rank : 5)
Query Neighborhood Hits	18	Target Neighborhood Hits	41	Shared Neighborhood Hits	2
SwissProt Accessions	Q8NFZ0, Q7Z4Q6, Q7Z4R0, Q8N1P5, Q8N586, Q96E82, Q96K67, Q96SW7, Q9UFB2	Gene names	FBXO18, FBH1, FBX18
Domain Architecture
Description	F-box only protein 18 (EC 3.6.1.-) (F-box DNA helicase 1).

F261_HUMAN
θ value	1.81305 (rank : 8)	NC score	0.055927 (rank : 3)
Query Neighborhood Hits	18	Target Neighborhood Hits	23	Shared Neighborhood Hits	4
SwissProt Accessions	P16118, Q99951	Gene names	PFKFB1, F6PK, PFRX
Domain Architecture
Description	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 (6PF-2-K/Fru- 2,6-P2ASE liver isozyme) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)].

LAMA2_MOUSE
θ value	2.36792 (rank : 9)	NC score	0.023040 (rank : 14)
Query Neighborhood Hits	18	Target Neighborhood Hits	1198	Shared Neighborhood Hits	6
SwissProt Accessions	Q60675, Q05003, Q64061	Gene names	Lama2
Domain Architecture
Description	Laminin alpha-2 chain precursor (Laminin M chain) (Merosin heavy chain).

DOCK1_HUMAN
θ value	3.0926 (rank : 10)	NC score	0.024323 (rank : 11)
Query Neighborhood Hits	18	Target Neighborhood Hits	191	Shared Neighborhood Hits	4
SwissProt Accessions	Q14185	Gene names	DOCK1
Domain Architecture
Description	Dedicator of cytokinesis protein 1 (180 kDa protein downstream of CRK) (DOCK180).

TRI30_MOUSE
θ value	3.0926 (rank : 11)	NC score	0.017330 (rank : 15)
Query Neighborhood Hits	18	Target Neighborhood Hits	434	Shared Neighborhood Hits	5
SwissProt Accessions	P15533, Q99K55, Q99PQ7, Q99PQ8, Q99PQ9	Gene names	Trim30, Rpt-1, Rpt1
Domain Architecture
Description	Tripartite motif-containing protein 30 (Down regulatory protein of interleukin 2 receptor).

ANLN_MOUSE
θ value	6.88961 (rank : 12)	NC score	0.023161 (rank : 13)
Query Neighborhood Hits	18	Target Neighborhood Hits	297	Shared Neighborhood Hits	6
SwissProt Accessions	Q8K298, Q8BL79, Q8BLB3, Q8K2N0, Q9CUY0	Gene names	Anln
Domain Architecture	No domain graphic available
Description	Actin-binding protein anillin.

NFM_MOUSE
θ value	6.88961 (rank : 13)	NC score	0.005148 (rank : 18)
Query Neighborhood Hits	18	Target Neighborhood Hits	1159	Shared Neighborhood Hits	7
SwissProt Accessions	P08553, Q61961	Gene names	Nef3, Nefm, Nfm
Domain Architecture
Description	Neurofilament triplet M protein (160 kDa neurofilament protein) (Neurofilament medium polypeptide) (NF-M).

SMC4_HUMAN
θ value	6.88961 (rank : 14)	NC score	0.014108 (rank : 16)
Query Neighborhood Hits	18	Target Neighborhood Hits	937	Shared Neighborhood Hits	8
SwissProt Accessions	Q9NTJ3, O95752, Q8NDL4, Q9UNT9	Gene names	SMC4L1, CAPC, SMC4
Domain Architecture
Description	Structural maintenance of chromosomes 4-like 1 protein (Chromosome- associated polypeptide C) (hCAP-C) (XCAP-C homolog).

DOCK8_MOUSE
θ value	8.99809 (rank : 15)	NC score	0.012337 (rank : 17)
Query Neighborhood Hits	18	Target Neighborhood Hits	38	Shared Neighborhood Hits	3
SwissProt Accessions	Q8C147, Q6PIS0, Q7TMQ5, Q8K105, Q9DBQ2	Gene names	Dock8
Domain Architecture	No domain graphic available
Description	Dedicator of cytokinesis protein 8.

F262_MOUSE
θ value	8.99809 (rank : 16)	NC score	0.026144 (rank : 9)
Query Neighborhood Hits	18	Target Neighborhood Hits	23	Shared Neighborhood Hits	3
SwissProt Accessions	P70265, Q8VEI9	Gene names	Pfkfb2
Domain Architecture
Description	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 (6PF-2-K/Fru- 2,6-P2ASE heart-type isozyme) (PFK-2/FBPase-2) [Includes: 6- phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)].

TAF1L_HUMAN
θ value	8.99809 (rank : 17)	NC score	0.027456 (rank : 7)
Query Neighborhood Hits	18	Target Neighborhood Hits	144	Shared Neighborhood Hits	5
SwissProt Accessions	Q8IZX4	Gene names	TAF1L
Domain Architecture	No domain graphic available
Description	Transcription initiation factor TFIID 210 kDa subunit (TBP-associated factor 210 kDa) (TAF(II)210) (TBP-associated factor 1-like).

TAF1_HUMAN
θ value	8.99809 (rank : 18)	NC score	0.026086 (rank : 10)
Query Neighborhood Hits	18	Target Neighborhood Hits	136	Shared Neighborhood Hits	4
SwissProt Accessions	P21675, Q6IUZ1	Gene names	TAF1, BA2R, CCG1, TAF2A
Domain Architecture
Description	Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (Transcription initiation factor TFIID 250 kDa subunit) (TAF(II)250) (TAFII-250) (TAFII250) (TBP-associated factor 250 kDa) (p250) (Cell cycle gene 1 protein).

Hits sorted by NC score

RRFM_HUMAN
NC score	0.999962 (rank : 1)	θ value	1.02182e-136 (rank : 1)
Query Neighborhood Hits	18	Target Neighborhood Hits	18	Shared Neighborhood Hits	18
SwissProt Accessions	Q96E11, Q5RKT1, Q5T7T0, Q5T7T1, Q5T7T2, Q5T7T3, Q5T7T4, Q5T7T5	Gene names	MRRF
Domain Architecture	No domain graphic available
Description	Ribosome recycling factor, mitochondrial precursor.

RRFM_MOUSE
NC score	0.986739 (rank : 2)	θ value	4.03687e-117 (rank : 2)
Query Neighborhood Hits	18	Target Neighborhood Hits	20	Shared Neighborhood Hits	7
SwissProt Accessions	Q9D6S7	Gene names	Mrrf
Domain Architecture	No domain graphic available
Description	Ribosome recycling factor, mitochondrial precursor.

F261_HUMAN
NC score	0.055927 (rank : 3)	θ value	1.81305 (rank : 8)
Query Neighborhood Hits	18	Target Neighborhood Hits	23	Shared Neighborhood Hits	4
SwissProt Accessions	P16118, Q99951	Gene names	PFKFB1, F6PK, PFRX
Domain Architecture
Description	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 (6PF-2-K/Fru- 2,6-P2ASE liver isozyme) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)].

CENPQ_MOUSE
NC score	0.053400 (rank : 4)	θ value	1.06291 (rank : 6)
Query Neighborhood Hits	18	Target Neighborhood Hits	160	Shared Neighborhood Hits	4
SwissProt Accessions	Q9CPQ5, Q8C2G4, Q8VEF8, Q9CX70	Gene names	Cenpq
Domain Architecture	No domain graphic available
Description	Centromere protein Q (CENP-Q).

FBX18_HUMAN
NC score	0.045698 (rank : 5)	θ value	1.06291 (rank : 7)
Query Neighborhood Hits	18	Target Neighborhood Hits	41	Shared Neighborhood Hits	2
SwissProt Accessions	Q8NFZ0, Q7Z4Q6, Q7Z4R0, Q8N1P5, Q8N586, Q96E82, Q96K67, Q96SW7, Q9UFB2	Gene names	FBXO18, FBH1, FBX18
Domain Architecture
Description	F-box only protein 18 (EC 3.6.1.-) (F-box DNA helicase 1).

GNDS_HUMAN
NC score	0.040032 (rank : 6)	θ value	0.279714 (rank : 3)
Query Neighborhood Hits	18	Target Neighborhood Hits	201	Shared Neighborhood Hits	2
SwissProt Accessions	Q12967, Q9HAX7, Q9HAY1, Q9HCT1	Gene names	RALGDS, RGF
Domain Architecture
Description	Ral guanine nucleotide dissociation stimulator (RalGEF) (RalGDS).

TAF1L_HUMAN
NC score	0.027456 (rank : 7)	θ value	8.99809 (rank : 17)
Query Neighborhood Hits	18	Target Neighborhood Hits	144	Shared Neighborhood Hits	5
SwissProt Accessions	Q8IZX4	Gene names	TAF1L
Domain Architecture	No domain graphic available
Description	Transcription initiation factor TFIID 210 kDa subunit (TBP-associated factor 210 kDa) (TAF(II)210) (TBP-associated factor 1-like).

LAMA2_HUMAN
NC score	0.026749 (rank : 8)	θ value	0.279714 (rank : 4)
Query Neighborhood Hits	18	Target Neighborhood Hits	1092	Shared Neighborhood Hits	7
SwissProt Accessions	P24043, Q14736, Q93022	Gene names	LAMA2, LAMM
Domain Architecture
Description	Laminin alpha-2 chain precursor (Laminin M chain) (Merosin heavy chain).

F262_MOUSE
NC score	0.026144 (rank : 9)	θ value	8.99809 (rank : 16)
Query Neighborhood Hits	18	Target Neighborhood Hits	23	Shared Neighborhood Hits	3
SwissProt Accessions	P70265, Q8VEI9	Gene names	Pfkfb2
Domain Architecture
Description	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 (6PF-2-K/Fru- 2,6-P2ASE heart-type isozyme) (PFK-2/FBPase-2) [Includes: 6- phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)].

TAF1_HUMAN
NC score	0.026086 (rank : 10)	θ value	8.99809 (rank : 18)
Query Neighborhood Hits	18	Target Neighborhood Hits	136	Shared Neighborhood Hits	4
SwissProt Accessions	P21675, Q6IUZ1	Gene names	TAF1, BA2R, CCG1, TAF2A
Domain Architecture
Description	Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (Transcription initiation factor TFIID 250 kDa subunit) (TAF(II)250) (TAFII-250) (TAFII250) (TBP-associated factor 250 kDa) (p250) (Cell cycle gene 1 protein).

DOCK1_HUMAN
NC score	0.024323 (rank : 11)	θ value	3.0926 (rank : 10)
Query Neighborhood Hits	18	Target Neighborhood Hits	191	Shared Neighborhood Hits	4
SwissProt Accessions	Q14185	Gene names	DOCK1
Domain Architecture
Description	Dedicator of cytokinesis protein 1 (180 kDa protein downstream of CRK) (DOCK180).

CI039_HUMAN
NC score	0.023792 (rank : 12)	θ value	0.62314 (rank : 5)
Query Neighborhood Hits	18	Target Neighborhood Hits	1171	Shared Neighborhood Hits	9
SwissProt Accessions	Q9NXG0, Q5VYJ0, Q9HAJ5	Gene names	C9orf39
Domain Architecture	No domain graphic available
Description	Protein C9orf39.

ANLN_MOUSE
NC score	0.023161 (rank : 13)	θ value	6.88961 (rank : 12)
Query Neighborhood Hits	18	Target Neighborhood Hits	297	Shared Neighborhood Hits	6
SwissProt Accessions	Q8K298, Q8BL79, Q8BLB3, Q8K2N0, Q9CUY0	Gene names	Anln
Domain Architecture	No domain graphic available
Description	Actin-binding protein anillin.

LAMA2_MOUSE
NC score	0.023040 (rank : 14)	θ value	2.36792 (rank : 9)
Query Neighborhood Hits	18	Target Neighborhood Hits	1198	Shared Neighborhood Hits	6
SwissProt Accessions	Q60675, Q05003, Q64061	Gene names	Lama2
Domain Architecture
Description	Laminin alpha-2 chain precursor (Laminin M chain) (Merosin heavy chain).

TRI30_MOUSE
NC score	0.017330 (rank : 15)	θ value	3.0926 (rank : 11)
Query Neighborhood Hits	18	Target Neighborhood Hits	434	Shared Neighborhood Hits	5
SwissProt Accessions	P15533, Q99K55, Q99PQ7, Q99PQ8, Q99PQ9	Gene names	Trim30, Rpt-1, Rpt1
Domain Architecture
Description	Tripartite motif-containing protein 30 (Down regulatory protein of interleukin 2 receptor).

SMC4_HUMAN
NC score	0.014108 (rank : 16)	θ value	6.88961 (rank : 14)
Query Neighborhood Hits	18	Target Neighborhood Hits	937	Shared Neighborhood Hits	8
SwissProt Accessions	Q9NTJ3, O95752, Q8NDL4, Q9UNT9	Gene names	SMC4L1, CAPC, SMC4
Domain Architecture
Description	Structural maintenance of chromosomes 4-like 1 protein (Chromosome- associated polypeptide C) (hCAP-C) (XCAP-C homolog).

DOCK8_MOUSE
NC score	0.012337 (rank : 17)	θ value	8.99809 (rank : 15)
Query Neighborhood Hits	18	Target Neighborhood Hits	38	Shared Neighborhood Hits	3
SwissProt Accessions	Q8C147, Q6PIS0, Q7TMQ5, Q8K105, Q9DBQ2	Gene names	Dock8
Domain Architecture	No domain graphic available
Description	Dedicator of cytokinesis protein 8.

NFM_MOUSE
NC score	0.005148 (rank : 18)	θ value	6.88961 (rank : 13)
Query Neighborhood Hits	18	Target Neighborhood Hits	1159	Shared Neighborhood Hits	7
SwissProt Accessions	P08553, Q61961	Gene names	Nef3, Nefm, Nfm
Domain Architecture
Description	Neurofilament triplet M protein (160 kDa neurofilament protein) (Neurofilament medium polypeptide) (NF-M).