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Network neighborhood for query Sequence : RPO3D_MOUSE

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RPO3D_MOUSE
SwissProt Accessions	Q91WD1, Q9CZ02	Gene names	Polr3d, Bn51t
Domain Architecture
Description	DNA-directed RNA polymerase III subunit D (EC 2.7.7.6) (DNA-directed RNA polymerase III 47 kDa polypeptide) (RNA polymerase C subunit 4) (RPC4).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

RPO3D_MOUSE
θ value	1.61255e-174 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	18	Target Neighborhood Hits	18	Shared Neighborhood Hits	18
SwissProt Accessions	Q91WD1, Q9CZ02	Gene names	Polr3d, Bn51t
Domain Architecture
Description	DNA-directed RNA polymerase III subunit D (EC 2.7.7.6) (DNA-directed RNA polymerase III 47 kDa polypeptide) (RNA polymerase C subunit 4) (RPC4).

RPO3D_HUMAN
θ value	1.66873e-171 (rank : 2)	NC score	0.995370 (rank : 2)
Query Neighborhood Hits	18	Target Neighborhood Hits	12	Shared Neighborhood Hits	7
SwissProt Accessions	P05423, Q6FI28, Q9BPV7, Q9BPZ1, Q9BXB3	Gene names	POLR3D, BN51, BN51T
Domain Architecture
Description	DNA-directed RNA polymerase III subunit D (EC 2.7.7.6) (DNA-directed RNA polymerase III 47 kDa polypeptide) (RNA polymerase C subunit 4) (RPC4) (RPC53) (Protein BN51).

NAF1_HUMAN
θ value	0.0113563 (rank : 3)	NC score	0.062152 (rank : 3)
Query Neighborhood Hits	18	Target Neighborhood Hits	937	Shared Neighborhood Hits	6
SwissProt Accessions	Q15025, O76008, Q96EL9, Q99833, Q9H1J3	Gene names	TNIP1, KIAA0113, NAF1
Domain Architecture
Description	Nef-associated factor 1 (Naf1) (TNFAIP3-interacting protein 1) (HIV-1 Nef-interacting protein) (Virion-associated nuclear shuttling protein) (VAN) (hVAN) (Nip40-1).

CHD8_HUMAN
θ value	1.06291 (rank : 4)	NC score	0.018126 (rank : 11)
Query Neighborhood Hits	18	Target Neighborhood Hits	235	Shared Neighborhood Hits	4
SwissProt Accessions	Q9HCK8, Q68DQ0, Q8N3Z9, Q8NCY4, Q8TBR9, Q96F26	Gene names	CHD8, HELSNF1, KIAA1564
Domain Architecture	No domain graphic available
Description	Chromodomain-helicase-DNA-binding protein 8 (EC 3.6.1.-) (ATP- dependent helicase CHD8) (CHD-8) (Helicase with SNF2 domain 1).

BAT2_MOUSE
θ value	1.38821 (rank : 5)	NC score	0.041719 (rank : 5)
Query Neighborhood Hits	18	Target Neighborhood Hits	947	Shared Neighborhood Hits	7
SwissProt Accessions	Q7TSC1, Q923A9, Q9Z1R1	Gene names	Bat2
Domain Architecture	No domain graphic available
Description	Large proline-rich protein BAT2 (HLA-B-associated transcript 2).

NMI_HUMAN
θ value	1.38821 (rank : 6)	NC score	0.042460 (rank : 4)
Query Neighborhood Hits	18	Target Neighborhood Hits	102	Shared Neighborhood Hits	2
SwissProt Accessions	Q13287, Q53TI8, Q9BVE5	Gene names	NMI
Domain Architecture
Description	N-myc-interactor (Nmi) (N-myc and STAT interactor).

LTBP2_MOUSE
θ value	2.36792 (rank : 7)	NC score	0.011180 (rank : 15)
Query Neighborhood Hits	18	Target Neighborhood Hits	617	Shared Neighborhood Hits	4
SwissProt Accessions	O08999, Q8C6W9	Gene names	Ltbp2
Domain Architecture
Description	Latent-transforming growth factor beta-binding protein 2 precursor (LTBP-2).

STAR8_HUMAN
θ value	2.36792 (rank : 8)	NC score	0.032572 (rank : 7)
Query Neighborhood Hits	18	Target Neighborhood Hits	216	Shared Neighborhood Hits	3
SwissProt Accessions	Q92502, Q5JST0	Gene names	STARD8, KIAA0189
Domain Architecture
Description	StAR-related lipid transfer protein 8 (StARD8) (START domain- containing protein 8).

BAT2_HUMAN
θ value	4.03905 (rank : 9)	NC score	0.036034 (rank : 6)
Query Neighborhood Hits	18	Target Neighborhood Hits	931	Shared Neighborhood Hits	6
SwissProt Accessions	P48634, O95875, Q5SQ29, Q5SQ30, Q5ST84, Q5STX6, Q5STX7, Q68DW9, Q6P9P7, Q6PIN1, Q96QC6	Gene names	BAT2, G2
Domain Architecture
Description	Large proline-rich protein BAT2 (HLA-B-associated transcript 2).

NEB2_HUMAN
θ value	5.27518 (rank : 10)	NC score	0.022724 (rank : 8)
Query Neighborhood Hits	18	Target Neighborhood Hits	883	Shared Neighborhood Hits	5
SwissProt Accessions	Q96SB3, Q8TCR9	Gene names	PPP1R9B
Domain Architecture	No domain graphic available
Description	Neurabin-2 (Neurabin-II) (Spinophilin) (Protein phosphatase 1 regulatory subunit 9B).

NEB2_MOUSE
θ value	5.27518 (rank : 11)	NC score	0.022428 (rank : 9)
Query Neighborhood Hits	18	Target Neighborhood Hits	889	Shared Neighborhood Hits	5
SwissProt Accessions	Q6R891, Q8K0X7	Gene names	Ppp1r9b
Domain Architecture	No domain graphic available
Description	Neurabin-2 (Neurabin-II) (Spinophilin) (Protein phosphatase 1 regulatory subunit 9B).

GP156_MOUSE
θ value	6.88961 (rank : 12)	NC score	0.019114 (rank : 10)
Query Neighborhood Hits	18	Target Neighborhood Hits	95	Shared Neighborhood Hits	2
SwissProt Accessions	Q6PCP7, Q8K452	Gene names	Gpr156, Gababl
Domain Architecture	No domain graphic available
Description	Probable G-protein coupled receptor 156 (GABAB-related G-protein coupled receptor).

HDAC9_MOUSE
θ value	6.88961 (rank : 13)	NC score	0.015273 (rank : 12)
Query Neighborhood Hits	18	Target Neighborhood Hits	186	Shared Neighborhood Hits	3
SwissProt Accessions	Q99N13, Q9EPT2	Gene names	Hdac9, Hdac7b, Hdrp, Mitr
Domain Architecture	No domain graphic available
Description	Histone deacetylase 9 (HD9) (HD7B) (Histone deacetylase-related protein) (MEF2-interacting transcription repressor MITR).

MDC1_HUMAN
θ value	6.88961 (rank : 14)	NC score	0.011126 (rank : 16)
Query Neighborhood Hits	18	Target Neighborhood Hits	1446	Shared Neighborhood Hits	8
SwissProt Accessions	Q14676, Q5JP55, Q5JP56, Q5ST83, Q68CQ3, Q86Z06, Q96QC2	Gene names	MDC1, KIAA0170, NFBD1
Domain Architecture	No domain graphic available
Description	Mediator of DNA damage checkpoint protein 1 (Nuclear factor with BRCT domains 1).

RPGF6_HUMAN
θ value	6.88961 (rank : 15)	NC score	0.012379 (rank : 13)
Query Neighborhood Hits	18	Target Neighborhood Hits	266	Shared Neighborhood Hits	5
SwissProt Accessions	Q8TEU7, Q8NI21, Q8TEU6, Q96PC1	Gene names	RAPGEF6, PDZGEF2
Domain Architecture
Description	Rap guanine nucleotide exchange factor 6 (PDZ domain-containing guanine nucleotide exchange factor 2) (PDZ-GEF2) (RA-GEF-2).

AIOL_HUMAN
θ value	8.99809 (rank : 16)	NC score	0.001119 (rank : 18)
Query Neighborhood Hits	18	Target Neighborhood Hits	739	Shared Neighborhood Hits	3
SwissProt Accessions	Q9UKT9, Q8WWQ9, Q8WWR0, Q8WWR1, Q8WWR2, Q8WWR3	Gene names	IKZF3, ZNFN1A3
Domain Architecture	No domain graphic available
Description	Zinc finger protein Aiolos (IKAROS family zinc finger protein 3).

TAI12_MOUSE
θ value	8.99809 (rank : 17)	NC score	0.012315 (rank : 14)
Query Neighborhood Hits	18	Target Neighborhood Hits	34	Shared Neighborhood Hits	2
SwissProt Accessions	Q8BGQ2, Q3UIH1	Gene names	Taip12
Domain Architecture	No domain graphic available
Description	TGF-beta-induced apoptosis protein 12 (TAIP-12).

US6NL_MOUSE
θ value	8.99809 (rank : 18)	NC score	0.010365 (rank : 17)
Query Neighborhood Hits	18	Target Neighborhood Hits	157	Shared Neighborhood Hits	2
SwissProt Accessions	Q80XC3, Q6ZQK8	Gene names	Usp6nl, Kiaa0019
Domain Architecture	No domain graphic available
Description	USP6 N-terminal-like protein.

Hits sorted by NC score

RPO3D_MOUSE
NC score	0.999962 (rank : 1)	θ value	1.61255e-174 (rank : 1)
Query Neighborhood Hits	18	Target Neighborhood Hits	18	Shared Neighborhood Hits	18
SwissProt Accessions	Q91WD1, Q9CZ02	Gene names	Polr3d, Bn51t
Domain Architecture
Description	DNA-directed RNA polymerase III subunit D (EC 2.7.7.6) (DNA-directed RNA polymerase III 47 kDa polypeptide) (RNA polymerase C subunit 4) (RPC4).

RPO3D_HUMAN
NC score	0.995370 (rank : 2)	θ value	1.66873e-171 (rank : 2)
Query Neighborhood Hits	18	Target Neighborhood Hits	12	Shared Neighborhood Hits	7
SwissProt Accessions	P05423, Q6FI28, Q9BPV7, Q9BPZ1, Q9BXB3	Gene names	POLR3D, BN51, BN51T
Domain Architecture
Description	DNA-directed RNA polymerase III subunit D (EC 2.7.7.6) (DNA-directed RNA polymerase III 47 kDa polypeptide) (RNA polymerase C subunit 4) (RPC4) (RPC53) (Protein BN51).

NAF1_HUMAN
NC score	0.062152 (rank : 3)	θ value	0.0113563 (rank : 3)
Query Neighborhood Hits	18	Target Neighborhood Hits	937	Shared Neighborhood Hits	6
SwissProt Accessions	Q15025, O76008, Q96EL9, Q99833, Q9H1J3	Gene names	TNIP1, KIAA0113, NAF1
Domain Architecture
Description	Nef-associated factor 1 (Naf1) (TNFAIP3-interacting protein 1) (HIV-1 Nef-interacting protein) (Virion-associated nuclear shuttling protein) (VAN) (hVAN) (Nip40-1).

NMI_HUMAN
NC score	0.042460 (rank : 4)	θ value	1.38821 (rank : 6)
Query Neighborhood Hits	18	Target Neighborhood Hits	102	Shared Neighborhood Hits	2
SwissProt Accessions	Q13287, Q53TI8, Q9BVE5	Gene names	NMI
Domain Architecture
Description	N-myc-interactor (Nmi) (N-myc and STAT interactor).

BAT2_MOUSE
NC score	0.041719 (rank : 5)	θ value	1.38821 (rank : 5)
Query Neighborhood Hits	18	Target Neighborhood Hits	947	Shared Neighborhood Hits	7
SwissProt Accessions	Q7TSC1, Q923A9, Q9Z1R1	Gene names	Bat2
Domain Architecture	No domain graphic available
Description	Large proline-rich protein BAT2 (HLA-B-associated transcript 2).

BAT2_HUMAN
NC score	0.036034 (rank : 6)	θ value	4.03905 (rank : 9)
Query Neighborhood Hits	18	Target Neighborhood Hits	931	Shared Neighborhood Hits	6
SwissProt Accessions	P48634, O95875, Q5SQ29, Q5SQ30, Q5ST84, Q5STX6, Q5STX7, Q68DW9, Q6P9P7, Q6PIN1, Q96QC6	Gene names	BAT2, G2
Domain Architecture
Description	Large proline-rich protein BAT2 (HLA-B-associated transcript 2).

STAR8_HUMAN
NC score	0.032572 (rank : 7)	θ value	2.36792 (rank : 8)
Query Neighborhood Hits	18	Target Neighborhood Hits	216	Shared Neighborhood Hits	3
SwissProt Accessions	Q92502, Q5JST0	Gene names	STARD8, KIAA0189
Domain Architecture
Description	StAR-related lipid transfer protein 8 (StARD8) (START domain- containing protein 8).

NEB2_HUMAN
NC score	0.022724 (rank : 8)	θ value	5.27518 (rank : 10)
Query Neighborhood Hits	18	Target Neighborhood Hits	883	Shared Neighborhood Hits	5
SwissProt Accessions	Q96SB3, Q8TCR9	Gene names	PPP1R9B
Domain Architecture	No domain graphic available
Description	Neurabin-2 (Neurabin-II) (Spinophilin) (Protein phosphatase 1 regulatory subunit 9B).

NEB2_MOUSE
NC score	0.022428 (rank : 9)	θ value	5.27518 (rank : 11)
Query Neighborhood Hits	18	Target Neighborhood Hits	889	Shared Neighborhood Hits	5
SwissProt Accessions	Q6R891, Q8K0X7	Gene names	Ppp1r9b
Domain Architecture	No domain graphic available
Description	Neurabin-2 (Neurabin-II) (Spinophilin) (Protein phosphatase 1 regulatory subunit 9B).

GP156_MOUSE
NC score	0.019114 (rank : 10)	θ value	6.88961 (rank : 12)
Query Neighborhood Hits	18	Target Neighborhood Hits	95	Shared Neighborhood Hits	2
SwissProt Accessions	Q6PCP7, Q8K452	Gene names	Gpr156, Gababl
Domain Architecture	No domain graphic available
Description	Probable G-protein coupled receptor 156 (GABAB-related G-protein coupled receptor).

CHD8_HUMAN
NC score	0.018126 (rank : 11)	θ value	1.06291 (rank : 4)
Query Neighborhood Hits	18	Target Neighborhood Hits	235	Shared Neighborhood Hits	4
SwissProt Accessions	Q9HCK8, Q68DQ0, Q8N3Z9, Q8NCY4, Q8TBR9, Q96F26	Gene names	CHD8, HELSNF1, KIAA1564
Domain Architecture	No domain graphic available
Description	Chromodomain-helicase-DNA-binding protein 8 (EC 3.6.1.-) (ATP- dependent helicase CHD8) (CHD-8) (Helicase with SNF2 domain 1).

HDAC9_MOUSE
NC score	0.015273 (rank : 12)	θ value	6.88961 (rank : 13)
Query Neighborhood Hits	18	Target Neighborhood Hits	186	Shared Neighborhood Hits	3
SwissProt Accessions	Q99N13, Q9EPT2	Gene names	Hdac9, Hdac7b, Hdrp, Mitr
Domain Architecture	No domain graphic available
Description	Histone deacetylase 9 (HD9) (HD7B) (Histone deacetylase-related protein) (MEF2-interacting transcription repressor MITR).

RPGF6_HUMAN
NC score	0.012379 (rank : 13)	θ value	6.88961 (rank : 15)
Query Neighborhood Hits	18	Target Neighborhood Hits	266	Shared Neighborhood Hits	5
SwissProt Accessions	Q8TEU7, Q8NI21, Q8TEU6, Q96PC1	Gene names	RAPGEF6, PDZGEF2
Domain Architecture
Description	Rap guanine nucleotide exchange factor 6 (PDZ domain-containing guanine nucleotide exchange factor 2) (PDZ-GEF2) (RA-GEF-2).

TAI12_MOUSE
NC score	0.012315 (rank : 14)	θ value	8.99809 (rank : 17)
Query Neighborhood Hits	18	Target Neighborhood Hits	34	Shared Neighborhood Hits	2
SwissProt Accessions	Q8BGQ2, Q3UIH1	Gene names	Taip12
Domain Architecture	No domain graphic available
Description	TGF-beta-induced apoptosis protein 12 (TAIP-12).

LTBP2_MOUSE
NC score	0.011180 (rank : 15)	θ value	2.36792 (rank : 7)
Query Neighborhood Hits	18	Target Neighborhood Hits	617	Shared Neighborhood Hits	4
SwissProt Accessions	O08999, Q8C6W9	Gene names	Ltbp2
Domain Architecture
Description	Latent-transforming growth factor beta-binding protein 2 precursor (LTBP-2).

MDC1_HUMAN
NC score	0.011126 (rank : 16)	θ value	6.88961 (rank : 14)
Query Neighborhood Hits	18	Target Neighborhood Hits	1446	Shared Neighborhood Hits	8
SwissProt Accessions	Q14676, Q5JP55, Q5JP56, Q5ST83, Q68CQ3, Q86Z06, Q96QC2	Gene names	MDC1, KIAA0170, NFBD1
Domain Architecture	No domain graphic available
Description	Mediator of DNA damage checkpoint protein 1 (Nuclear factor with BRCT domains 1).

US6NL_MOUSE
NC score	0.010365 (rank : 17)	θ value	8.99809 (rank : 18)
Query Neighborhood Hits	18	Target Neighborhood Hits	157	Shared Neighborhood Hits	2
SwissProt Accessions	Q80XC3, Q6ZQK8	Gene names	Usp6nl, Kiaa0019
Domain Architecture	No domain graphic available
Description	USP6 N-terminal-like protein.

AIOL_HUMAN
NC score	0.001119 (rank : 18)	θ value	8.99809 (rank : 16)
Query Neighborhood Hits	18	Target Neighborhood Hits	739	Shared Neighborhood Hits	3
SwissProt Accessions	Q9UKT9, Q8WWQ9, Q8WWR0, Q8WWR1, Q8WWR2, Q8WWR3	Gene names	IKZF3, ZNFN1A3
Domain Architecture	No domain graphic available
Description	Zinc finger protein Aiolos (IKAROS family zinc finger protein 3).