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Network neighborhood for query Sequence : RPB9_HUMAN

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RPB9_HUMAN
SwissProt Accessions	P36954, Q6NW05	Gene names	POLR2I
Domain Architecture
Description	DNA-directed RNA polymerase II subunit I (EC 2.7.7.6) (DNA-directed RNA polymerase II 14.5 kDa polypeptide) (RPB9) (RPB14.5).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

RPB9_HUMAN
θ value	3.23591e-74 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	12	Target Neighborhood Hits	12	Shared Neighborhood Hits	12
SwissProt Accessions	P36954, Q6NW05	Gene names	POLR2I
Domain Architecture
Description	DNA-directed RNA polymerase II subunit I (EC 2.7.7.6) (DNA-directed RNA polymerase II 14.5 kDa polypeptide) (RPB9) (RPB14.5).

RPB9_MOUSE
θ value	3.23591e-74 (rank : 2)	NC score	0.999962 (rank : 2)
Query Neighborhood Hits	12	Target Neighborhood Hits	12	Shared Neighborhood Hits	12
SwissProt Accessions	P60898	Gene names	Polr2i
Domain Architecture
Description	DNA-directed RNA polymerase II subunit I (EC 2.7.7.6) (DNA-directed RNA polymerase II 14.5 kDa polypeptide) (RPB9) (RPB14.5).

RPC11_MOUSE
θ value	4.0297e-08 (rank : 3)	NC score	0.550102 (rank : 3)
Query Neighborhood Hits	12	Target Neighborhood Hits	17	Shared Neighborhood Hits	10
SwissProt Accessions	Q9CQZ7, Q9D1U1	Gene names	Polr3k
Domain Architecture
Description	DNA-directed RNA polymerases III 12.5 kDa polypeptide (EC 2.7.7.6) (RNA polymerase III subunit K) (RNA polymerase III C11 subunit).

RPC11_HUMAN
θ value	7.59969e-07 (rank : 4)	NC score	0.526673 (rank : 4)
Query Neighborhood Hits	12	Target Neighborhood Hits	16	Shared Neighborhood Hits	10
SwissProt Accessions	Q9Y2Y1, Q96S35	Gene names	POLR3K, RPC11
Domain Architecture
Description	DNA-directed RNA polymerases III 12.5 kDa polypeptide (EC 2.7.7.6) (RNA polymerase III subunit K) (RNA polymerase III C11 subunit) (HsC11p) (hRPC11).

RPA12_HUMAN
θ value	0.62314 (rank : 5)	NC score	0.178945 (rank : 5)
Query Neighborhood Hits	12	Target Neighborhood Hits	12	Shared Neighborhood Hits	9
SwissProt Accessions	Q9P1U0	Gene names	ZNRD1, RPA12
Domain Architecture	No domain graphic available
Description	DNA-directed RNA polymerase I subunit 12 (EC 2.7.7.6) (Nuclear RNA polymerase I small-specific subunit Rpa12) (Zinc ribbon domain- containing protein 1).

TCEA2_MOUSE
θ value	0.62314 (rank : 6)	NC score	0.134521 (rank : 7)
Query Neighborhood Hits	12	Target Neighborhood Hits	42	Shared Neighborhood Hits	8
SwissProt Accessions	Q9QVN7, O08667	Gene names	Tcea2
Domain Architecture
Description	Transcription elongation factor A protein 2 (Transcription elongation factor S-II protein 2) (Testis-specific S-II) (Protein S-II-T1) (Transcription elongation factor TFIIS.l).

TCEA1_HUMAN
θ value	1.38821 (rank : 7)	NC score	0.128699 (rank : 9)
Query Neighborhood Hits	12	Target Neighborhood Hits	72	Shared Neighborhood Hits	10
SwissProt Accessions	P23193, Q15563, Q6FG87	Gene names	TCEA1, TFIIS
Domain Architecture
Description	Transcription elongation factor A protein 1 (Transcription elongation factor S-II protein 1) (Transcription elongation factor TFIIS.o).

TCEA1_MOUSE
θ value	1.38821 (rank : 8)	NC score	0.130065 (rank : 8)
Query Neighborhood Hits	12	Target Neighborhood Hits	51	Shared Neighborhood Hits	10
SwissProt Accessions	P10711, P10712, P23713	Gene names	Tcea1, Tceat
Domain Architecture
Description	Transcription elongation factor A protein 1 (Transcription elongation factor S-II protein 1) (Transcription elongation factor TFIIS.o).

TCEA2_HUMAN
θ value	3.0926 (rank : 9)	NC score	0.119909 (rank : 10)
Query Neighborhood Hits	12	Target Neighborhood Hits	81	Shared Neighborhood Hits	9
SwissProt Accessions	Q15560, Q8TD37, Q8TD38	Gene names	TCEA2
Domain Architecture
Description	Transcription elongation factor A protein 2 (Transcription elongation factor S-II protein 2) (Testis-specific S-II) (Transcription elongation factor TFIIS.l).

AP4B1_MOUSE
θ value	4.03905 (rank : 10)	NC score	0.027975 (rank : 13)
Query Neighborhood Hits	12	Target Neighborhood Hits	41	Shared Neighborhood Hits	3
SwissProt Accessions	Q9WV76	Gene names	Ap4b1
Domain Architecture
Description	AP-4 complex subunit beta-1 (Adapter-related protein complex 4 beta-1 subunit) (Beta subunit of AP-4) (AP-4 adapter complex beta subunit).

RPA12_MOUSE
θ value	4.03905 (rank : 11)	NC score	0.145533 (rank : 6)
Query Neighborhood Hits	12	Target Neighborhood Hits	10	Shared Neighborhood Hits	8
SwissProt Accessions	Q791N7	Gene names	Znrd1, Rpa12
Domain Architecture	No domain graphic available
Description	DNA-directed RNA polymerase I subunit 12 (EC 2.7.7.6) (Nuclear RNA polymerase I small-specific subunit Rpa12) (Zinc ribbon domain- containing protein 1).

RIMS1_HUMAN
θ value	8.99809 (rank : 12)	NC score	0.012441 (rank : 14)
Query Neighborhood Hits	12	Target Neighborhood Hits	437	Shared Neighborhood Hits	3
SwissProt Accessions	Q86UR5, O15048, Q8TDY9, Q8TDZ5, Q9HBA1, Q9HBA2, Q9HBA3, Q9HBA4, Q9HBA5, Q9HBA6	Gene names	RIMS1, KIAA0340, RIM1
Domain Architecture
Description	Regulating synaptic membrane exocytosis protein 1 (Rab3-interacting molecule 1) (RIM 1).

TCEA3_HUMAN
θ value	θ > 10 (rank : 13)	NC score	0.096988 (rank : 11)
Query Neighborhood Hits	12	Target Neighborhood Hits	49	Shared Neighborhood Hits	8
SwissProt Accessions	O75764	Gene names	TCEA3, TFIISH
Domain Architecture
Description	Transcription elongation factor A protein 3 (Transcription elongation factor S-II protein 3) (Transcription elongation factor TFIIS.h).

TCEA3_MOUSE
θ value	θ > 10 (rank : 14)	NC score	0.096910 (rank : 12)
Query Neighborhood Hits	12	Target Neighborhood Hits	48	Shared Neighborhood Hits	8
SwissProt Accessions	P23881, O88710, Q9CTZ8, Q9DCZ5	Gene names	Tcea3, Tfiish
Domain Architecture
Description	Transcription elongation factor A protein 3 (Transcription elongation factor S-II protein 3) (Transcription elongation factor TFIIS.h).

Hits sorted by NC score

RPB9_HUMAN
NC score	0.999962 (rank : 1)	θ value	3.23591e-74 (rank : 1)
Query Neighborhood Hits	12	Target Neighborhood Hits	12	Shared Neighborhood Hits	12
SwissProt Accessions	P36954, Q6NW05	Gene names	POLR2I
Domain Architecture
Description	DNA-directed RNA polymerase II subunit I (EC 2.7.7.6) (DNA-directed RNA polymerase II 14.5 kDa polypeptide) (RPB9) (RPB14.5).

RPB9_MOUSE
NC score	0.999962 (rank : 2)	θ value	3.23591e-74 (rank : 2)
Query Neighborhood Hits	12	Target Neighborhood Hits	12	Shared Neighborhood Hits	12
SwissProt Accessions	P60898	Gene names	Polr2i
Domain Architecture
Description	DNA-directed RNA polymerase II subunit I (EC 2.7.7.6) (DNA-directed RNA polymerase II 14.5 kDa polypeptide) (RPB9) (RPB14.5).

RPC11_MOUSE
NC score	0.550102 (rank : 3)	θ value	4.0297e-08 (rank : 3)
Query Neighborhood Hits	12	Target Neighborhood Hits	17	Shared Neighborhood Hits	10
SwissProt Accessions	Q9CQZ7, Q9D1U1	Gene names	Polr3k
Domain Architecture
Description	DNA-directed RNA polymerases III 12.5 kDa polypeptide (EC 2.7.7.6) (RNA polymerase III subunit K) (RNA polymerase III C11 subunit).

RPC11_HUMAN
NC score	0.526673 (rank : 4)	θ value	7.59969e-07 (rank : 4)
Query Neighborhood Hits	12	Target Neighborhood Hits	16	Shared Neighborhood Hits	10
SwissProt Accessions	Q9Y2Y1, Q96S35	Gene names	POLR3K, RPC11
Domain Architecture
Description	DNA-directed RNA polymerases III 12.5 kDa polypeptide (EC 2.7.7.6) (RNA polymerase III subunit K) (RNA polymerase III C11 subunit) (HsC11p) (hRPC11).

RPA12_HUMAN
NC score	0.178945 (rank : 5)	θ value	0.62314 (rank : 5)
Query Neighborhood Hits	12	Target Neighborhood Hits	12	Shared Neighborhood Hits	9
SwissProt Accessions	Q9P1U0	Gene names	ZNRD1, RPA12
Domain Architecture	No domain graphic available
Description	DNA-directed RNA polymerase I subunit 12 (EC 2.7.7.6) (Nuclear RNA polymerase I small-specific subunit Rpa12) (Zinc ribbon domain- containing protein 1).

RPA12_MOUSE
NC score	0.145533 (rank : 6)	θ value	4.03905 (rank : 11)
Query Neighborhood Hits	12	Target Neighborhood Hits	10	Shared Neighborhood Hits	8
SwissProt Accessions	Q791N7	Gene names	Znrd1, Rpa12
Domain Architecture	No domain graphic available
Description	DNA-directed RNA polymerase I subunit 12 (EC 2.7.7.6) (Nuclear RNA polymerase I small-specific subunit Rpa12) (Zinc ribbon domain- containing protein 1).

TCEA2_MOUSE
NC score	0.134521 (rank : 7)	θ value	0.62314 (rank : 6)
Query Neighborhood Hits	12	Target Neighborhood Hits	42	Shared Neighborhood Hits	8
SwissProt Accessions	Q9QVN7, O08667	Gene names	Tcea2
Domain Architecture
Description	Transcription elongation factor A protein 2 (Transcription elongation factor S-II protein 2) (Testis-specific S-II) (Protein S-II-T1) (Transcription elongation factor TFIIS.l).

TCEA1_MOUSE
NC score	0.130065 (rank : 8)	θ value	1.38821 (rank : 8)
Query Neighborhood Hits	12	Target Neighborhood Hits	51	Shared Neighborhood Hits	10
SwissProt Accessions	P10711, P10712, P23713	Gene names	Tcea1, Tceat
Domain Architecture
Description	Transcription elongation factor A protein 1 (Transcription elongation factor S-II protein 1) (Transcription elongation factor TFIIS.o).

TCEA1_HUMAN
NC score	0.128699 (rank : 9)	θ value	1.38821 (rank : 7)
Query Neighborhood Hits	12	Target Neighborhood Hits	72	Shared Neighborhood Hits	10
SwissProt Accessions	P23193, Q15563, Q6FG87	Gene names	TCEA1, TFIIS
Domain Architecture
Description	Transcription elongation factor A protein 1 (Transcription elongation factor S-II protein 1) (Transcription elongation factor TFIIS.o).

TCEA2_HUMAN
NC score	0.119909 (rank : 10)	θ value	3.0926 (rank : 9)
Query Neighborhood Hits	12	Target Neighborhood Hits	81	Shared Neighborhood Hits	9
SwissProt Accessions	Q15560, Q8TD37, Q8TD38	Gene names	TCEA2
Domain Architecture
Description	Transcription elongation factor A protein 2 (Transcription elongation factor S-II protein 2) (Testis-specific S-II) (Transcription elongation factor TFIIS.l).

TCEA3_HUMAN
NC score	0.096988 (rank : 11)	θ value	θ > 10 (rank : 13)
Query Neighborhood Hits	12	Target Neighborhood Hits	49	Shared Neighborhood Hits	8
SwissProt Accessions	O75764	Gene names	TCEA3, TFIISH
Domain Architecture
Description	Transcription elongation factor A protein 3 (Transcription elongation factor S-II protein 3) (Transcription elongation factor TFIIS.h).

TCEA3_MOUSE
NC score	0.096910 (rank : 12)	θ value	θ > 10 (rank : 14)
Query Neighborhood Hits	12	Target Neighborhood Hits	48	Shared Neighborhood Hits	8
SwissProt Accessions	P23881, O88710, Q9CTZ8, Q9DCZ5	Gene names	Tcea3, Tfiish
Domain Architecture
Description	Transcription elongation factor A protein 3 (Transcription elongation factor S-II protein 3) (Transcription elongation factor TFIIS.h).

AP4B1_MOUSE
NC score	0.027975 (rank : 13)	θ value	4.03905 (rank : 10)
Query Neighborhood Hits	12	Target Neighborhood Hits	41	Shared Neighborhood Hits	3
SwissProt Accessions	Q9WV76	Gene names	Ap4b1
Domain Architecture
Description	AP-4 complex subunit beta-1 (Adapter-related protein complex 4 beta-1 subunit) (Beta subunit of AP-4) (AP-4 adapter complex beta subunit).

RIMS1_HUMAN
NC score	0.012441 (rank : 14)	θ value	8.99809 (rank : 12)
Query Neighborhood Hits	12	Target Neighborhood Hits	437	Shared Neighborhood Hits	3
SwissProt Accessions	Q86UR5, O15048, Q8TDY9, Q8TDZ5, Q9HBA1, Q9HBA2, Q9HBA3, Q9HBA4, Q9HBA5, Q9HBA6	Gene names	RIMS1, KIAA0340, RIM1
Domain Architecture
Description	Regulating synaptic membrane exocytosis protein 1 (Rab3-interacting molecule 1) (RIM 1).