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Network neighborhood for query Sequence : RFA1_MOUSE

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RFA1_MOUSE
SwissProt Accessions	Q8VEE4, Q3TEJ8	Gene names	Rpa1
Domain Architecture	No domain graphic available
Description	Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (p70).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

RFA1_HUMAN
θ value	0 (rank : 1)	NC score	0.994212 (rank : 2)
Query Neighborhood Hits	16	Target Neighborhood Hits	13	Shared Neighborhood Hits	3
SwissProt Accessions	P27694, Q59ES9	Gene names	RPA1, REPA1, RPA70
Domain Architecture
Description	Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (p70).

RFA1_MOUSE
θ value	0 (rank : 2)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	16	Target Neighborhood Hits	16	Shared Neighborhood Hits	16
SwissProt Accessions	Q8VEE4, Q3TEJ8	Gene names	Rpa1
Domain Architecture	No domain graphic available
Description	Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (p70).

DCX_MOUSE
θ value	0.62314 (rank : 3)	NC score	0.030014 (rank : 3)
Query Neighborhood Hits	16	Target Neighborhood Hits	124	Shared Neighborhood Hits	3
SwissProt Accessions	O88809	Gene names	Dcx, Dcn
Domain Architecture
Description	Neuronal migration protein doublecortin (Lissencephalin-X) (Lis-X) (Doublin).

SPEG_HUMAN
θ value	0.813845 (rank : 4)	NC score	0.007500 (rank : 14)
Query Neighborhood Hits	16	Target Neighborhood Hits	1762	Shared Neighborhood Hits	5
SwissProt Accessions	Q15772, Q27J74, Q695L1, Q6FGA6, Q6ZQW1, Q6ZTL8, Q9P2P9	Gene names	SPEG, APEG1, KIAA1297
Domain Architecture
Description	Striated muscle preferentially expressed protein kinase (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1).

ZBT10_HUMAN
θ value	2.36792 (rank : 5)	NC score	0.007631 (rank : 13)
Query Neighborhood Hits	16	Target Neighborhood Hits	831	Shared Neighborhood Hits	3
SwissProt Accessions	Q96DT7, Q86W96, Q8IXI9, Q96MH9	Gene names	ZBTB10, RINZF, RINZFC
Domain Architecture
Description	Zinc finger and BTB domain-containing protein 10 (Zinc finger protein RIN ZF).

GRIN1_HUMAN
θ value	3.0926 (rank : 6)	NC score	0.019492 (rank : 5)
Query Neighborhood Hits	16	Target Neighborhood Hits	681	Shared Neighborhood Hits	5
SwissProt Accessions	Q7Z2K8, Q8ND74, Q96PZ4	Gene names	GPRIN1, KIAA1893
Domain Architecture	No domain graphic available
Description	G protein-regulated inducer of neurite outgrowth 1 (GRIN1).

VITRN_MOUSE
θ value	3.0926 (rank : 7)	NC score	0.014797 (rank : 8)
Query Neighborhood Hits	16	Target Neighborhood Hits	68	Shared Neighborhood Hits	2
SwissProt Accessions	Q8VHI5, Q3TZ47, Q8BQ41, Q8K047, Q9CYZ1	Gene names	Vit
Domain Architecture	No domain graphic available
Description	Vitrin precursor.

DDX17_HUMAN
θ value	4.03905 (rank : 8)	NC score	0.011062 (rank : 11)
Query Neighborhood Hits	16	Target Neighborhood Hits	104	Shared Neighborhood Hits	3
SwissProt Accessions	Q92841, Q69YT1, Q6ICD6	Gene names	DDX17
Domain Architecture
Description	Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-) (DEAD box protein 17) (RNA-dependent helicase p72) (DEAD box protein p72).

DDX17_MOUSE
θ value	4.03905 (rank : 9)	NC score	0.011068 (rank : 10)
Query Neighborhood Hits	16	Target Neighborhood Hits	105	Shared Neighborhood Hits	3
SwissProt Accessions	Q501J6, Q6P5G1, Q8BIN2	Gene names	Ddx17
Domain Architecture	No domain graphic available
Description	Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-) (DEAD box protein 17).

SC24C_HUMAN
θ value	4.03905 (rank : 10)	NC score	0.016615 (rank : 7)
Query Neighborhood Hits	16	Target Neighborhood Hits	662	Shared Neighborhood Hits	5
SwissProt Accessions	P53992, Q8WV25	Gene names	SEC24C, KIAA0079
Domain Architecture
Description	Protein transport protein Sec24C (SEC24-related protein C).

BSN_HUMAN
θ value	5.27518 (rank : 11)	NC score	0.013306 (rank : 9)
Query Neighborhood Hits	16	Target Neighborhood Hits	1537	Shared Neighborhood Hits	6
SwissProt Accessions	Q9UPA5, O43161, Q7LGH3	Gene names	BSN, KIAA0434, ZNF231
Domain Architecture	No domain graphic available
Description	Protein bassoon (Zinc finger protein 231).

PAR1_MOUSE
θ value	5.27518 (rank : 12)	NC score	0.003763 (rank : 15)
Query Neighborhood Hits	16	Target Neighborhood Hits	673	Shared Neighborhood Hits	2
SwissProt Accessions	P30558, P97507, Q3TVP3	Gene names	F2r, Cf2r, Par1
Domain Architecture
Description	Proteinase-activated receptor 1 precursor (PAR-1) (Thrombin receptor).

PAG1_MOUSE
θ value	6.88961 (rank : 13)	NC score	0.020315 (rank : 4)
Query Neighborhood Hits	16	Target Neighborhood Hits	30	Shared Neighborhood Hits	2
SwissProt Accessions	Q3U1F9, Q8BFS1, Q9EQF3	Gene names	Pag1, Cbp, Pag
Domain Architecture	No domain graphic available
Description	Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 (Csk-binding protein) (Transmembrane phosphoprotein Cbp).

PDE3B_HUMAN
θ value	6.88961 (rank : 14)	NC score	0.009319 (rank : 12)
Query Neighborhood Hits	16	Target Neighborhood Hits	60	Shared Neighborhood Hits	2
SwissProt Accessions	Q13370, O00639, Q14408	Gene names	PDE3B
Domain Architecture
Description	cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B) (CGIPDE1) (CGIP1).

ZN682_HUMAN
θ value	6.88961 (rank : 15)	NC score	0.000602 (rank : 16)
Query Neighborhood Hits	16	Target Neighborhood Hits	779	Shared Neighborhood Hits	3
SwissProt Accessions	O95780, Q96JV9	Gene names	ZNF682
Domain Architecture	No domain graphic available
Description	Zinc finger protein 682.

LMAN1_MOUSE
θ value	8.99809 (rank : 16)	NC score	0.018161 (rank : 6)
Query Neighborhood Hits	16	Target Neighborhood Hits	87	Shared Neighborhood Hits	3
SwissProt Accessions	Q9D0F3	Gene names	Lman1, Ergic53
Domain Architecture
Description	ERGIC-53 protein precursor (ER-Golgi intermediate compartment 53 kDa protein) (Lectin, mannose-binding 1) (p58).

Hits sorted by NC score

RFA1_MOUSE
NC score	0.999962 (rank : 1)	θ value	0 (rank : 2)
Query Neighborhood Hits	16	Target Neighborhood Hits	16	Shared Neighborhood Hits	16
SwissProt Accessions	Q8VEE4, Q3TEJ8	Gene names	Rpa1
Domain Architecture	No domain graphic available
Description	Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (p70).

RFA1_HUMAN
NC score	0.994212 (rank : 2)	θ value	0 (rank : 1)
Query Neighborhood Hits	16	Target Neighborhood Hits	13	Shared Neighborhood Hits	3
SwissProt Accessions	P27694, Q59ES9	Gene names	RPA1, REPA1, RPA70
Domain Architecture
Description	Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (p70).

DCX_MOUSE
NC score	0.030014 (rank : 3)	θ value	0.62314 (rank : 3)
Query Neighborhood Hits	16	Target Neighborhood Hits	124	Shared Neighborhood Hits	3
SwissProt Accessions	O88809	Gene names	Dcx, Dcn
Domain Architecture
Description	Neuronal migration protein doublecortin (Lissencephalin-X) (Lis-X) (Doublin).

PAG1_MOUSE
NC score	0.020315 (rank : 4)	θ value	6.88961 (rank : 13)
Query Neighborhood Hits	16	Target Neighborhood Hits	30	Shared Neighborhood Hits	2
SwissProt Accessions	Q3U1F9, Q8BFS1, Q9EQF3	Gene names	Pag1, Cbp, Pag
Domain Architecture	No domain graphic available
Description	Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 (Csk-binding protein) (Transmembrane phosphoprotein Cbp).

GRIN1_HUMAN
NC score	0.019492 (rank : 5)	θ value	3.0926 (rank : 6)
Query Neighborhood Hits	16	Target Neighborhood Hits	681	Shared Neighborhood Hits	5
SwissProt Accessions	Q7Z2K8, Q8ND74, Q96PZ4	Gene names	GPRIN1, KIAA1893
Domain Architecture	No domain graphic available
Description	G protein-regulated inducer of neurite outgrowth 1 (GRIN1).

LMAN1_MOUSE
NC score	0.018161 (rank : 6)	θ value	8.99809 (rank : 16)
Query Neighborhood Hits	16	Target Neighborhood Hits	87	Shared Neighborhood Hits	3
SwissProt Accessions	Q9D0F3	Gene names	Lman1, Ergic53
Domain Architecture
Description	ERGIC-53 protein precursor (ER-Golgi intermediate compartment 53 kDa protein) (Lectin, mannose-binding 1) (p58).

SC24C_HUMAN
NC score	0.016615 (rank : 7)	θ value	4.03905 (rank : 10)
Query Neighborhood Hits	16	Target Neighborhood Hits	662	Shared Neighborhood Hits	5
SwissProt Accessions	P53992, Q8WV25	Gene names	SEC24C, KIAA0079
Domain Architecture
Description	Protein transport protein Sec24C (SEC24-related protein C).

VITRN_MOUSE
NC score	0.014797 (rank : 8)	θ value	3.0926 (rank : 7)
Query Neighborhood Hits	16	Target Neighborhood Hits	68	Shared Neighborhood Hits	2
SwissProt Accessions	Q8VHI5, Q3TZ47, Q8BQ41, Q8K047, Q9CYZ1	Gene names	Vit
Domain Architecture	No domain graphic available
Description	Vitrin precursor.

BSN_HUMAN
NC score	0.013306 (rank : 9)	θ value	5.27518 (rank : 11)
Query Neighborhood Hits	16	Target Neighborhood Hits	1537	Shared Neighborhood Hits	6
SwissProt Accessions	Q9UPA5, O43161, Q7LGH3	Gene names	BSN, KIAA0434, ZNF231
Domain Architecture	No domain graphic available
Description	Protein bassoon (Zinc finger protein 231).

DDX17_MOUSE
NC score	0.011068 (rank : 10)	θ value	4.03905 (rank : 9)
Query Neighborhood Hits	16	Target Neighborhood Hits	105	Shared Neighborhood Hits	3
SwissProt Accessions	Q501J6, Q6P5G1, Q8BIN2	Gene names	Ddx17
Domain Architecture	No domain graphic available
Description	Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-) (DEAD box protein 17).

DDX17_HUMAN
NC score	0.011062 (rank : 11)	θ value	4.03905 (rank : 8)
Query Neighborhood Hits	16	Target Neighborhood Hits	104	Shared Neighborhood Hits	3
SwissProt Accessions	Q92841, Q69YT1, Q6ICD6	Gene names	DDX17
Domain Architecture
Description	Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-) (DEAD box protein 17) (RNA-dependent helicase p72) (DEAD box protein p72).

PDE3B_HUMAN
NC score	0.009319 (rank : 12)	θ value	6.88961 (rank : 14)
Query Neighborhood Hits	16	Target Neighborhood Hits	60	Shared Neighborhood Hits	2
SwissProt Accessions	Q13370, O00639, Q14408	Gene names	PDE3B
Domain Architecture
Description	cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B) (CGIPDE1) (CGIP1).

ZBT10_HUMAN
NC score	0.007631 (rank : 13)	θ value	2.36792 (rank : 5)
Query Neighborhood Hits	16	Target Neighborhood Hits	831	Shared Neighborhood Hits	3
SwissProt Accessions	Q96DT7, Q86W96, Q8IXI9, Q96MH9	Gene names	ZBTB10, RINZF, RINZFC
Domain Architecture
Description	Zinc finger and BTB domain-containing protein 10 (Zinc finger protein RIN ZF).

SPEG_HUMAN
NC score	0.007500 (rank : 14)	θ value	0.813845 (rank : 4)
Query Neighborhood Hits	16	Target Neighborhood Hits	1762	Shared Neighborhood Hits	5
SwissProt Accessions	Q15772, Q27J74, Q695L1, Q6FGA6, Q6ZQW1, Q6ZTL8, Q9P2P9	Gene names	SPEG, APEG1, KIAA1297
Domain Architecture
Description	Striated muscle preferentially expressed protein kinase (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1).

PAR1_MOUSE
NC score	0.003763 (rank : 15)	θ value	5.27518 (rank : 12)
Query Neighborhood Hits	16	Target Neighborhood Hits	673	Shared Neighborhood Hits	2
SwissProt Accessions	P30558, P97507, Q3TVP3	Gene names	F2r, Cf2r, Par1
Domain Architecture
Description	Proteinase-activated receptor 1 precursor (PAR-1) (Thrombin receptor).

ZN682_HUMAN
NC score	0.000602 (rank : 16)	θ value	6.88961 (rank : 15)
Query Neighborhood Hits	16	Target Neighborhood Hits	779	Shared Neighborhood Hits	3
SwissProt Accessions	O95780, Q96JV9	Gene names	ZNF682
Domain Architecture	No domain graphic available
Description	Zinc finger protein 682.