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Network neighborhood for query Sequence : ABEC3_MOUSE

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ABEC3_MOUSE
 
SwissProt Accessions Q99J72, Q8C7L0, Q8C8V7 Gene names Apobec3
Domain
Architecture
Description DNA dC->dU-editing enzyme APOBEC-3 (EC 3.5.4.-) (Apolipoprotein B mRNA-editing complex 3) (Arp3) (CEM15) (CEM-15).
Rank Plots



Hits sorted by θ


ABEC3_MOUSE
 
θ value 0 (rank : 1) NC score 0.999962 (rank : 1)
Query Neighborhood Hits 23 Target Neighborhood Hits 23 Shared Neighborhood Hits 23
SwissProt Accessions Q99J72, Q8C7L0, Q8C8V7 Gene names Apobec3
Domain
Architecture
Description DNA dC->dU-editing enzyme APOBEC-3 (EC 3.5.4.-) (Apolipoprotein B mRNA-editing complex 3) (Arp3) (CEM15) (CEM-15).
ABC3F_HUMAN
 
θ value 5.37103e-53 (rank : 2) NC score 0.940300 (rank : 3)
Query Neighborhood Hits 23 Target Neighborhood Hits 16 Shared Neighborhood Hits 13
SwissProt Accessions Q8IUX4, Q45F03, Q7Z2N2, Q7Z2N5 Gene names APOBEC3F
Domain
Architecture
Description DNA dC->dU-editing enzyme APOBEC-3F (EC 3.5.4.-) (Apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 3F).
ABC3B_HUMAN
 
θ value 2.49495e-50 (rank : 3) NC score 0.930552 (rank : 5)
Query Neighborhood Hits 23 Target Neighborhood Hits 16 Shared Neighborhood Hits 13
SwissProt Accessions Q9UH17, O95618, Q5IFJ4, Q7Z2N3, Q7Z6D6, Q9UE74 Gene names APOBEC3B
Domain
Architecture
Description Probable DNA dC->dU-editing enzyme APOBEC-3B (EC 3.5.4.-) (Phorbolin- 1-related protein) (Phorbolin-2/3).
ABC3D_HUMAN
 
θ value 1.61718e-49 (rank : 4) NC score 0.936472 (rank : 4)
Query Neighborhood Hits 23 Target Neighborhood Hits 15 Shared Neighborhood Hits 13
SwissProt Accessions Q96AK3, Q5JZ91, Q7Z2N2, Q7Z2N5, Q7Z2N6 Gene names APOBEC3D
Domain
Architecture
Description Probable DNA dC->dU-editing enzyme APOBEC-3D (EC 3.5.4.-).
ABC3G_HUMAN
 
θ value 2.67181e-44 (rank : 5) NC score 0.930070 (rank : 6)
Query Neighborhood Hits 23 Target Neighborhood Hits 16 Shared Neighborhood Hits 13
SwissProt Accessions Q9HC16, Q45F02, Q5TF77, Q7Z2N1, Q7Z2N4, Q9H9H8 Gene names APOBEC3G
Domain
Architecture
Description DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.-) (APOBEC-related cytidine deaminase) (ARCD) (APOBEC-related protein) (ARP-9) (CEM15) (CEM-15).
ABC3C_HUMAN
 
θ value 1.6774e-38 (rank : 6) NC score 0.945837 (rank : 2)
Query Neighborhood Hits 23 Target Neighborhood Hits 13 Shared Neighborhood Hits 13
SwissProt Accessions Q9NRW3, Q5JZ92, Q7Z2N7, Q96F12 Gene names APOBEC3C, APOBEC1L, PBI
Domain
Architecture
Description Probable DNA dC->dU-editing enzyme APOBEC-3C (EC 3.5.4.-) (APOBEC1- like) (Phorbolin I protein).
AICDA_MOUSE
 
θ value 5.584e-34 (rank : 7) NC score 0.923927 (rank : 7)
Query Neighborhood Hits 23 Target Neighborhood Hits 14 Shared Neighborhood Hits 13
SwissProt Accessions Q9WVE0 Gene names Aicda, Aid
Domain
Architecture
Description Activation-induced cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase).
AICDA_HUMAN
 
θ value 1.24399e-33 (rank : 8) NC score 0.923870 (rank : 8)
Query Neighborhood Hits 23 Target Neighborhood Hits 14 Shared Neighborhood Hits 13
SwissProt Accessions Q9GZX7 Gene names AICDA, AID
Domain
Architecture
Description Activation-induced cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase).
ABEC2_HUMAN
 
θ value 2.35151e-24 (rank : 9) NC score 0.874574 (rank : 11)
Query Neighborhood Hits 23 Target Neighborhood Hits 13 Shared Neighborhood Hits 13
SwissProt Accessions Q9Y235, Q5TGU5, Q5TGU6 Gene names APOBEC2
Domain
Architecture
Description Probable C->U-editing enzyme APOBEC-2 (EC 3.5.4.-).
ABEC2_MOUSE
 
θ value 3.07116e-24 (rank : 10) NC score 0.876173 (rank : 10)
Query Neighborhood Hits 23 Target Neighborhood Hits 14 Shared Neighborhood Hits 13
SwissProt Accessions Q9WV35 Gene names Apobec2
Domain
Architecture
Description Probable C->U-editing enzyme APOBEC-2 (EC 3.5.4.-).
ABC3A_HUMAN
 
θ value 1.29031e-22 (rank : 11) NC score 0.903487 (rank : 9)
Query Neighborhood Hits 23 Target Neighborhood Hits 13 Shared Neighborhood Hits 13
SwissProt Accessions P31941, Q12807, Q5JZ93, Q9UH18 Gene names APOBEC3A
Domain
Architecture
Description Probable DNA dC->dU-editing enzyme APOBEC-3A (EC 3.5.4.-) (Phorbolin- 1).
ABEC1_MOUSE
 
θ value 7.58209e-15 (rank : 12) NC score 0.790500 (rank : 12)
Query Neighborhood Hits 23 Target Neighborhood Hits 15 Shared Neighborhood Hits 13
SwissProt Accessions P51908, Q99L67 Gene names Apobec1
Domain
Architecture
Description C->U-editing enzyme APOBEC-1 (EC 3.5.4.-) (Apolipoprotein B mRNA- editing enzyme 1).
ABEC1_HUMAN
 
θ value 1.86753e-13 (rank : 13) NC score 0.783806 (rank : 13)
Query Neighborhood Hits 23 Target Neighborhood Hits 15 Shared Neighborhood Hits 13
SwissProt Accessions P41238, Q9UE64, Q9UM71 Gene names APOBEC1
Domain
Architecture
Description C->U-editing enzyme APOBEC-1 (EC 3.5.4.-) (Apolipoprotein B mRNA- editing enzyme 1) (HEPR).
SMG5_HUMAN
 
θ value 0.0330416 (rank : 14) NC score 0.063542 (rank : 14)
Query Neighborhood Hits 23 Target Neighborhood Hits 180 Shared Neighborhood Hits 3
SwissProt Accessions Q9UPR3, Q5QJE7, Q8IXC0, Q8IY09, Q96IJ7 Gene names SMG5, EST1B, KIAA1089
Domain
Architecture

No domain graphic available

Description Protein SMG5 (SMG-5 homolog) (EST1-like protein B) (LPTS-interacting protein) (LPTS-RP1).
IFN21_HUMAN
 
θ value 0.62314 (rank : 15) NC score 0.030255 (rank : 16)
Query Neighborhood Hits 23 Target Neighborhood Hits 28 Shared Neighborhood Hits 7
SwissProt Accessions P01568 Gene names IFNA21
Domain
Architecture
Description Interferon alpha-21 precursor (Interferon alpha-F) (LeIF F).
ADAM2_MOUSE
 
θ value 2.36792 (rank : 16) NC score 0.007068 (rank : 23)
Query Neighborhood Hits 23 Target Neighborhood Hits 209 Shared Neighborhood Hits 2
SwissProt Accessions Q60718, Q60814, Q9D4G3, Q9QWJ0 Gene names Adam2, Ftnb
Domain
Architecture
Description ADAM 2 precursor (A disintegrin and metalloproteinase domain 2) (Fertilin subunit beta) (PH-30) (PH30) (PH30-beta).
IFNA8_HUMAN
 
θ value 2.36792 (rank : 17) NC score 0.027284 (rank : 17)
Query Neighborhood Hits 23 Target Neighborhood Hits 29 Shared Neighborhood Hits 7
SwissProt Accessions P32881, P01565, P09236 Gene names IFNA8
Domain
Architecture
Description Interferon alpha-8 precursor (Interferon alpha-B2) (Interferon alpha- B) (LeIF B).
SMG5_MOUSE
 
θ value 2.36792 (rank : 18) NC score 0.051521 (rank : 15)
Query Neighborhood Hits 23 Target Neighborhood Hits 58 Shared Neighborhood Hits 3
SwissProt Accessions Q6ZPY2, Q497S2, Q8R3S4 Gene names Smg5, Est1b, Kiaa1089
Domain
Architecture

No domain graphic available

Description Protein SMG5 (SMG-5 homolog) (EST1-like protein B).
GPR97_MOUSE
 
θ value 3.0926 (rank : 19) NC score 0.010149 (rank : 22)
Query Neighborhood Hits 23 Target Neighborhood Hits 89 Shared Neighborhood Hits 2
SwissProt Accessions Q8R0T6 Gene names Gpr97
Domain
Architecture

No domain graphic available

Description Probable G-protein coupled receptor 97 precursor.
IFNA5_HUMAN
 
θ value 3.0926 (rank : 20) NC score 0.026536 (rank : 18)
Query Neighborhood Hits 23 Target Neighborhood Hits 27 Shared Neighborhood Hits 7
SwissProt Accessions P01569 Gene names IFNA5
Domain
Architecture
Description Interferon alpha-5 precursor (Interferon alpha-G) (LeIF G) (Interferon alpha-61).
IFN14_HUMAN
 
θ value 4.03905 (rank : 21) NC score 0.026060 (rank : 19)
Query Neighborhood Hits 23 Target Neighborhood Hits 28 Shared Neighborhood Hits 7
SwissProt Accessions P01570 Gene names IFNA14
Domain
Architecture
Description Interferon alpha-14 precursor (Interferon alpha-H) (LeIF H) (Interferon lambda-2-H).
IFN17_HUMAN
 
θ value 6.88961 (rank : 22) NC score 0.024662 (rank : 20)
Query Neighborhood Hits 23 Target Neighborhood Hits 27 Shared Neighborhood Hits 7
SwissProt Accessions P01571, Q14639 Gene names IFNA17
Domain
Architecture
Description Interferon alpha-17 precursor (Interferon alpha-I') (Interferon alpha- T) (Interferon alpha-88).
IFNA4_HUMAN
 
θ value 6.88961 (rank : 23) NC score 0.024641 (rank : 21)
Query Neighborhood Hits 23 Target Neighborhood Hits 27 Shared Neighborhood Hits 7
SwissProt Accessions P05014, P13358 Gene names IFNA4
Domain
Architecture
Description Interferon alpha-4 precursor (Interferon alpha-4B) (Interferon alpha- M1) (Interferon alpha-76).

Hits sorted by NC score


ABEC3_MOUSE
 
NC score 0.999962 (rank : 1) θ value 0 (rank : 1)
Query Neighborhood Hits 23 Target Neighborhood Hits 23 Shared Neighborhood Hits 23
SwissProt Accessions Q99J72, Q8C7L0, Q8C8V7 Gene names Apobec3
Domain
Architecture
Description DNA dC->dU-editing enzyme APOBEC-3 (EC 3.5.4.-) (Apolipoprotein B mRNA-editing complex 3) (Arp3) (CEM15) (CEM-15).
ABC3C_HUMAN
 
NC score 0.945837 (rank : 2) θ value 1.6774e-38 (rank : 6)
Query Neighborhood Hits 23 Target Neighborhood Hits 13 Shared Neighborhood Hits 13
SwissProt Accessions Q9NRW3, Q5JZ92, Q7Z2N7, Q96F12 Gene names APOBEC3C, APOBEC1L, PBI
Domain
Architecture
Description Probable DNA dC->dU-editing enzyme APOBEC-3C (EC 3.5.4.-) (APOBEC1- like) (Phorbolin I protein).
ABC3F_HUMAN
 
NC score 0.940300 (rank : 3) θ value 5.37103e-53 (rank : 2)
Query Neighborhood Hits 23 Target Neighborhood Hits 16 Shared Neighborhood Hits 13
SwissProt Accessions Q8IUX4, Q45F03, Q7Z2N2, Q7Z2N5 Gene names APOBEC3F
Domain
Architecture
Description DNA dC->dU-editing enzyme APOBEC-3F (EC 3.5.4.-) (Apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 3F).
ABC3D_HUMAN
 
NC score 0.936472 (rank : 4) θ value 1.61718e-49 (rank : 4)
Query Neighborhood Hits 23 Target Neighborhood Hits 15 Shared Neighborhood Hits 13
SwissProt Accessions Q96AK3, Q5JZ91, Q7Z2N2, Q7Z2N5, Q7Z2N6 Gene names APOBEC3D
Domain
Architecture
Description Probable DNA dC->dU-editing enzyme APOBEC-3D (EC 3.5.4.-).
ABC3B_HUMAN
 
NC score 0.930552 (rank : 5) θ value 2.49495e-50 (rank : 3)
Query Neighborhood Hits 23 Target Neighborhood Hits 16 Shared Neighborhood Hits 13
SwissProt Accessions Q9UH17, O95618, Q5IFJ4, Q7Z2N3, Q7Z6D6, Q9UE74 Gene names APOBEC3B
Domain
Architecture
Description Probable DNA dC->dU-editing enzyme APOBEC-3B (EC 3.5.4.-) (Phorbolin- 1-related protein) (Phorbolin-2/3).
ABC3G_HUMAN
 
NC score 0.930070 (rank : 6) θ value 2.67181e-44 (rank : 5)
Query Neighborhood Hits 23 Target Neighborhood Hits 16 Shared Neighborhood Hits 13
SwissProt Accessions Q9HC16, Q45F02, Q5TF77, Q7Z2N1, Q7Z2N4, Q9H9H8 Gene names APOBEC3G
Domain
Architecture
Description DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.-) (APOBEC-related cytidine deaminase) (ARCD) (APOBEC-related protein) (ARP-9) (CEM15) (CEM-15).
AICDA_MOUSE
 
NC score 0.923927 (rank : 7) θ value 5.584e-34 (rank : 7)
Query Neighborhood Hits 23 Target Neighborhood Hits 14 Shared Neighborhood Hits 13
SwissProt Accessions Q9WVE0 Gene names Aicda, Aid
Domain
Architecture
Description Activation-induced cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase).
AICDA_HUMAN
 
NC score 0.923870 (rank : 8) θ value 1.24399e-33 (rank : 8)
Query Neighborhood Hits 23 Target Neighborhood Hits 14 Shared Neighborhood Hits 13
SwissProt Accessions Q9GZX7 Gene names AICDA, AID
Domain
Architecture
Description Activation-induced cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase).
ABC3A_HUMAN
 
NC score 0.903487 (rank : 9) θ value 1.29031e-22 (rank : 11)
Query Neighborhood Hits 23 Target Neighborhood Hits 13 Shared Neighborhood Hits 13
SwissProt Accessions P31941, Q12807, Q5JZ93, Q9UH18 Gene names APOBEC3A
Domain
Architecture
Description Probable DNA dC->dU-editing enzyme APOBEC-3A (EC 3.5.4.-) (Phorbolin- 1).
ABEC2_MOUSE
 
NC score 0.876173 (rank : 10) θ value 3.07116e-24 (rank : 10)
Query Neighborhood Hits 23 Target Neighborhood Hits 14 Shared Neighborhood Hits 13
SwissProt Accessions Q9WV35 Gene names Apobec2
Domain
Architecture
Description Probable C->U-editing enzyme APOBEC-2 (EC 3.5.4.-).
ABEC2_HUMAN
 
NC score 0.874574 (rank : 11) θ value 2.35151e-24 (rank : 9)
Query Neighborhood Hits 23 Target Neighborhood Hits 13 Shared Neighborhood Hits 13
SwissProt Accessions Q9Y235, Q5TGU5, Q5TGU6 Gene names APOBEC2
Domain
Architecture
Description Probable C->U-editing enzyme APOBEC-2 (EC 3.5.4.-).
ABEC1_MOUSE
 
NC score 0.790500 (rank : 12) θ value 7.58209e-15 (rank : 12)
Query Neighborhood Hits 23 Target Neighborhood Hits 15 Shared Neighborhood Hits 13
SwissProt Accessions P51908, Q99L67 Gene names Apobec1
Domain
Architecture
Description C->U-editing enzyme APOBEC-1 (EC 3.5.4.-) (Apolipoprotein B mRNA- editing enzyme 1).
ABEC1_HUMAN
 
NC score 0.783806 (rank : 13) θ value 1.86753e-13 (rank : 13)
Query Neighborhood Hits 23 Target Neighborhood Hits 15 Shared Neighborhood Hits 13
SwissProt Accessions P41238, Q9UE64, Q9UM71 Gene names APOBEC1
Domain
Architecture
Description C->U-editing enzyme APOBEC-1 (EC 3.5.4.-) (Apolipoprotein B mRNA- editing enzyme 1) (HEPR).
SMG5_HUMAN
 
NC score 0.063542 (rank : 14) θ value 0.0330416 (rank : 14)
Query Neighborhood Hits 23 Target Neighborhood Hits 180 Shared Neighborhood Hits 3
SwissProt Accessions Q9UPR3, Q5QJE7, Q8IXC0, Q8IY09, Q96IJ7 Gene names SMG5, EST1B, KIAA1089
Domain
Architecture

No domain graphic available

Description Protein SMG5 (SMG-5 homolog) (EST1-like protein B) (LPTS-interacting protein) (LPTS-RP1).
SMG5_MOUSE
 
NC score 0.051521 (rank : 15) θ value 2.36792 (rank : 18)
Query Neighborhood Hits 23 Target Neighborhood Hits 58 Shared Neighborhood Hits 3
SwissProt Accessions Q6ZPY2, Q497S2, Q8R3S4 Gene names Smg5, Est1b, Kiaa1089
Domain
Architecture

No domain graphic available

Description Protein SMG5 (SMG-5 homolog) (EST1-like protein B).
IFN21_HUMAN
 
NC score 0.030255 (rank : 16) θ value 0.62314 (rank : 15)
Query Neighborhood Hits 23 Target Neighborhood Hits 28 Shared Neighborhood Hits 7
SwissProt Accessions P01568 Gene names IFNA21
Domain
Architecture
Description Interferon alpha-21 precursor (Interferon alpha-F) (LeIF F).
IFNA8_HUMAN
 
NC score 0.027284 (rank : 17) θ value 2.36792 (rank : 17)
Query Neighborhood Hits 23 Target Neighborhood Hits 29 Shared Neighborhood Hits 7
SwissProt Accessions P32881, P01565, P09236 Gene names IFNA8
Domain
Architecture
Description Interferon alpha-8 precursor (Interferon alpha-B2) (Interferon alpha- B) (LeIF B).
IFNA5_HUMAN
 
NC score 0.026536 (rank : 18) θ value 3.0926 (rank : 20)
Query Neighborhood Hits 23 Target Neighborhood Hits 27 Shared Neighborhood Hits 7
SwissProt Accessions P01569 Gene names IFNA5
Domain
Architecture
Description Interferon alpha-5 precursor (Interferon alpha-G) (LeIF G) (Interferon alpha-61).
IFN14_HUMAN
 
NC score 0.026060 (rank : 19) θ value 4.03905 (rank : 21)
Query Neighborhood Hits 23 Target Neighborhood Hits 28 Shared Neighborhood Hits 7
SwissProt Accessions P01570 Gene names IFNA14
Domain
Architecture
Description Interferon alpha-14 precursor (Interferon alpha-H) (LeIF H) (Interferon lambda-2-H).
IFN17_HUMAN
 
NC score 0.024662 (rank : 20) θ value 6.88961 (rank : 22)
Query Neighborhood Hits 23 Target Neighborhood Hits 27 Shared Neighborhood Hits 7
SwissProt Accessions P01571, Q14639 Gene names IFNA17
Domain
Architecture
Description Interferon alpha-17 precursor (Interferon alpha-I') (Interferon alpha- T) (Interferon alpha-88).
IFNA4_HUMAN
 
NC score 0.024641 (rank : 21) θ value 6.88961 (rank : 23)
Query Neighborhood Hits 23 Target Neighborhood Hits 27 Shared Neighborhood Hits 7
SwissProt Accessions P05014, P13358 Gene names IFNA4
Domain
Architecture
Description Interferon alpha-4 precursor (Interferon alpha-4B) (Interferon alpha- M1) (Interferon alpha-76).
GPR97_MOUSE
 
NC score 0.010149 (rank : 22) θ value 3.0926 (rank : 19)
Query Neighborhood Hits 23 Target Neighborhood Hits 89 Shared Neighborhood Hits 2
SwissProt Accessions Q8R0T6 Gene names Gpr97
Domain
Architecture

No domain graphic available

Description Probable G-protein coupled receptor 97 precursor.
ADAM2_MOUSE
 
NC score 0.007068 (rank : 23) θ value 2.36792 (rank : 16)
Query Neighborhood Hits 23 Target Neighborhood Hits 209 Shared Neighborhood Hits 2
SwissProt Accessions Q60718, Q60814, Q9D4G3, Q9QWJ0 Gene names Adam2, Ftnb
Domain
Architecture
Description ADAM 2 precursor (A disintegrin and metalloproteinase domain 2) (Fertilin subunit beta) (PH-30) (PH30) (PH30-beta).