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Network neighborhood for query Sequence : TRUA_MOUSE

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TRUA_MOUSE
SwissProt Accessions	Q9WU56, Q8C250, Q8VDQ3	Gene names	Pus1
Domain Architecture
Description	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine isomerase I) (tRNA pseudouridylate synthase I).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

TRUA_HUMAN
θ value	0 (rank : 1)	NC score	0.996930 (rank : 2)
Query Neighborhood Hits	12	Target Neighborhood Hits	10	Shared Neighborhood Hits	6
SwissProt Accessions	Q9Y606, Q8WYT2, Q9BU44	Gene names	PUS1
Domain Architecture
Description	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine isomerase I) (tRNA pseudouridylate synthase I).

TRUA_MOUSE
θ value	0 (rank : 2)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	12	Target Neighborhood Hits	12	Shared Neighborhood Hits	12
SwissProt Accessions	Q9WU56, Q8C250, Q8VDQ3	Gene names	Pus1
Domain Architecture
Description	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine isomerase I) (tRNA pseudouridylate synthase I).

PUS3_MOUSE
θ value	1.29331e-14 (rank : 3)	NC score	0.563288 (rank : 3)
Query Neighborhood Hits	12	Target Neighborhood Hits	29	Shared Neighborhood Hits	5
SwissProt Accessions	Q9JI38, Q8BVA6, Q8K0Y3	Gene names	Pus3
Domain Architecture	No domain graphic available
Description	tRNA pseudouridine synthase 3 (EC 5.4.99.-) (tRNA-uridine isomerase 3) (tRNA pseudouridylate synthase 3).

PUS3_HUMAN
θ value	8.38298e-14 (rank : 4)	NC score	0.555284 (rank : 4)
Query Neighborhood Hits	12	Target Neighborhood Hits	21	Shared Neighborhood Hits	5
SwissProt Accessions	Q9BZE2, Q96D17, Q96J23, Q96NB4	Gene names	PUS3
Domain Architecture	No domain graphic available
Description	tRNA pseudouridine synthase 3 (EC 5.4.99.-) (tRNA-uridine isomerase 3) (tRNA pseudouridylate synthase 3).

PUSL1_HUMAN
θ value	8.97725e-08 (rank : 5)	NC score	0.503915 (rank : 5)
Query Neighborhood Hits	12	Target Neighborhood Hits	8	Shared Neighborhood Hits	5
SwissProt Accessions	Q8N0Z8	Gene names	PUSL1
Domain Architecture	No domain graphic available
Description	tRNA pseudouridine synthase-like 1 (EC 5.4.99.-) (tRNA-uridine isomerase-like 1) (tRNA pseudouridylate synthase-like 1).

LZTS1_HUMAN
θ value	0.21417 (rank : 6)	NC score	0.038858 (rank : 6)
Query Neighborhood Hits	12	Target Neighborhood Hits	532	Shared Neighborhood Hits	4
SwissProt Accessions	Q9Y250, Q9Y5V7, Q9Y5V8, Q9Y5V9, Q9Y5W0, Q9Y5W1, Q9Y5W2	Gene names	LZTS1, FEZ1
Domain Architecture
Description	Leucine zipper putative tumor suppressor 1 (F37/esophageal cancer- related gene-coding leucine-zipper motif) (Fez1).

SREC2_HUMAN
θ value	1.81305 (rank : 7)	NC score	0.012308 (rank : 8)
Query Neighborhood Hits	12	Target Neighborhood Hits	645	Shared Neighborhood Hits	3
SwissProt Accessions	Q96GP6, Q8IXF3, Q9BW74	Gene names	SCARF2, SREC2, SREPCR
Domain Architecture	No domain graphic available
Description	Scavenger receptor class F member 2 precursor (Scavenger receptor expressed by endothelial cells 2 protein) (SREC-II) (SRECRP-1).

ZN688_HUMAN
θ value	1.81305 (rank : 8)	NC score	0.002637 (rank : 12)
Query Neighborhood Hits	12	Target Neighborhood Hits	873	Shared Neighborhood Hits	2
SwissProt Accessions	Q8WV14, O75701, Q8IW91, Q96MN0	Gene names	ZNF688
Domain Architecture	No domain graphic available
Description	Zinc finger protein 688.

BPA1_MOUSE
θ value	3.0926 (rank : 9)	NC score	0.007481 (rank : 10)
Query Neighborhood Hits	12	Target Neighborhood Hits	1477	Shared Neighborhood Hits	3
SwissProt Accessions	Q91ZU6, Q91ZU7	Gene names	Dst, Bpag1
Domain Architecture
Description	Bullous pemphigoid antigen 1, isoforms 1/2/3/4 (BPA) (Hemidesmosomal plaque protein) (Dystonia musculorum protein) (Dystonin).

TENX_HUMAN
θ value	5.27518 (rank : 10)	NC score	0.006970 (rank : 11)
Query Neighborhood Hits	12	Target Neighborhood Hits	789	Shared Neighborhood Hits	3
SwissProt Accessions	P22105, P78530, P78531, Q08424, Q9UMG7	Gene names	TNXB, HXBL, TNX, XB
Domain Architecture
Description	Tenascin-X precursor (TN-X) (Hexabrachion-like protein).

BLNK_HUMAN
θ value	6.88961 (rank : 11)	NC score	0.015708 (rank : 7)
Query Neighborhood Hits	12	Target Neighborhood Hits	228	Shared Neighborhood Hits	2
SwissProt Accessions	Q8WV28, O75498, O75499	Gene names	BLNK, BASH, SLP65
Domain Architecture	No domain graphic available
Description	B-cell linker protein (Cytoplasmic adapter protein) (B-cell adapter containing SH2 domain protein) (B-cell adapter containing Src homology 2 domain protein) (Src homology 2 domain-containing leukocyte protein of 65 kDa) (SLP-65).

LAD1_MOUSE
θ value	8.99809 (rank : 12)	NC score	0.011104 (rank : 9)
Query Neighborhood Hits	12	Target Neighborhood Hits	391	Shared Neighborhood Hits	2
SwissProt Accessions	P57016	Gene names	Lad1
Domain Architecture	No domain graphic available
Description	Ladinin 1 (Lad-1) (Linear IgA disease autoantigen).

Hits sorted by NC score

TRUA_MOUSE
NC score	0.999962 (rank : 1)	θ value	0 (rank : 2)
Query Neighborhood Hits	12	Target Neighborhood Hits	12	Shared Neighborhood Hits	12
SwissProt Accessions	Q9WU56, Q8C250, Q8VDQ3	Gene names	Pus1
Domain Architecture
Description	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine isomerase I) (tRNA pseudouridylate synthase I).

TRUA_HUMAN
NC score	0.996930 (rank : 2)	θ value	0 (rank : 1)
Query Neighborhood Hits	12	Target Neighborhood Hits	10	Shared Neighborhood Hits	6
SwissProt Accessions	Q9Y606, Q8WYT2, Q9BU44	Gene names	PUS1
Domain Architecture
Description	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine isomerase I) (tRNA pseudouridylate synthase I).

PUS3_MOUSE
NC score	0.563288 (rank : 3)	θ value	1.29331e-14 (rank : 3)
Query Neighborhood Hits	12	Target Neighborhood Hits	29	Shared Neighborhood Hits	5
SwissProt Accessions	Q9JI38, Q8BVA6, Q8K0Y3	Gene names	Pus3
Domain Architecture	No domain graphic available
Description	tRNA pseudouridine synthase 3 (EC 5.4.99.-) (tRNA-uridine isomerase 3) (tRNA pseudouridylate synthase 3).

PUS3_HUMAN
NC score	0.555284 (rank : 4)	θ value	8.38298e-14 (rank : 4)
Query Neighborhood Hits	12	Target Neighborhood Hits	21	Shared Neighborhood Hits	5
SwissProt Accessions	Q9BZE2, Q96D17, Q96J23, Q96NB4	Gene names	PUS3
Domain Architecture	No domain graphic available
Description	tRNA pseudouridine synthase 3 (EC 5.4.99.-) (tRNA-uridine isomerase 3) (tRNA pseudouridylate synthase 3).

PUSL1_HUMAN
NC score	0.503915 (rank : 5)	θ value	8.97725e-08 (rank : 5)
Query Neighborhood Hits	12	Target Neighborhood Hits	8	Shared Neighborhood Hits	5
SwissProt Accessions	Q8N0Z8	Gene names	PUSL1
Domain Architecture	No domain graphic available
Description	tRNA pseudouridine synthase-like 1 (EC 5.4.99.-) (tRNA-uridine isomerase-like 1) (tRNA pseudouridylate synthase-like 1).

LZTS1_HUMAN
NC score	0.038858 (rank : 6)	θ value	0.21417 (rank : 6)
Query Neighborhood Hits	12	Target Neighborhood Hits	532	Shared Neighborhood Hits	4
SwissProt Accessions	Q9Y250, Q9Y5V7, Q9Y5V8, Q9Y5V9, Q9Y5W0, Q9Y5W1, Q9Y5W2	Gene names	LZTS1, FEZ1
Domain Architecture
Description	Leucine zipper putative tumor suppressor 1 (F37/esophageal cancer- related gene-coding leucine-zipper motif) (Fez1).

BLNK_HUMAN
NC score	0.015708 (rank : 7)	θ value	6.88961 (rank : 11)
Query Neighborhood Hits	12	Target Neighborhood Hits	228	Shared Neighborhood Hits	2
SwissProt Accessions	Q8WV28, O75498, O75499	Gene names	BLNK, BASH, SLP65
Domain Architecture	No domain graphic available
Description	B-cell linker protein (Cytoplasmic adapter protein) (B-cell adapter containing SH2 domain protein) (B-cell adapter containing Src homology 2 domain protein) (Src homology 2 domain-containing leukocyte protein of 65 kDa) (SLP-65).

SREC2_HUMAN
NC score	0.012308 (rank : 8)	θ value	1.81305 (rank : 7)
Query Neighborhood Hits	12	Target Neighborhood Hits	645	Shared Neighborhood Hits	3
SwissProt Accessions	Q96GP6, Q8IXF3, Q9BW74	Gene names	SCARF2, SREC2, SREPCR
Domain Architecture	No domain graphic available
Description	Scavenger receptor class F member 2 precursor (Scavenger receptor expressed by endothelial cells 2 protein) (SREC-II) (SRECRP-1).

LAD1_MOUSE
NC score	0.011104 (rank : 9)	θ value	8.99809 (rank : 12)
Query Neighborhood Hits	12	Target Neighborhood Hits	391	Shared Neighborhood Hits	2
SwissProt Accessions	P57016	Gene names	Lad1
Domain Architecture	No domain graphic available
Description	Ladinin 1 (Lad-1) (Linear IgA disease autoantigen).

BPA1_MOUSE
NC score	0.007481 (rank : 10)	θ value	3.0926 (rank : 9)
Query Neighborhood Hits	12	Target Neighborhood Hits	1477	Shared Neighborhood Hits	3
SwissProt Accessions	Q91ZU6, Q91ZU7	Gene names	Dst, Bpag1
Domain Architecture
Description	Bullous pemphigoid antigen 1, isoforms 1/2/3/4 (BPA) (Hemidesmosomal plaque protein) (Dystonia musculorum protein) (Dystonin).

TENX_HUMAN
NC score	0.006970 (rank : 11)	θ value	5.27518 (rank : 10)
Query Neighborhood Hits	12	Target Neighborhood Hits	789	Shared Neighborhood Hits	3
SwissProt Accessions	P22105, P78530, P78531, Q08424, Q9UMG7	Gene names	TNXB, HXBL, TNX, XB
Domain Architecture
Description	Tenascin-X precursor (TN-X) (Hexabrachion-like protein).

ZN688_HUMAN
NC score	0.002637 (rank : 12)	θ value	1.81305 (rank : 8)
Query Neighborhood Hits	12	Target Neighborhood Hits	873	Shared Neighborhood Hits	2
SwissProt Accessions	Q8WV14, O75701, Q8IW91, Q96MN0	Gene names	ZNF688
Domain Architecture	No domain graphic available
Description	Zinc finger protein 688.