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Network neighborhood for query Sequence : TIM50_MOUSE

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TIM50_MOUSE
SwissProt Accessions	Q9D880, Q8R3A7, Q91Z17	Gene names	Timm50, Tim50
Domain Architecture	No domain graphic available
Description	Import inner membrane translocase subunit TIM50, mitochondrial precursor.
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

TIM50_MOUSE
θ value	1.19313e-177 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	18	Target Neighborhood Hits	18	Shared Neighborhood Hits	18
SwissProt Accessions	Q9D880, Q8R3A7, Q91Z17	Gene names	Timm50, Tim50
Domain Architecture	No domain graphic available
Description	Import inner membrane translocase subunit TIM50, mitochondrial precursor.

TIM50_HUMAN
θ value	2.18449e-163 (rank : 2)	NC score	0.997774 (rank : 2)
Query Neighborhood Hits	18	Target Neighborhood Hits	11	Shared Neighborhood Hits	10
SwissProt Accessions	Q3ZCQ8, Q6QA00, Q96FJ5, Q96GY2, Q9H370	Gene names	TIMM50, TIM50
Domain Architecture	No domain graphic available
Description	Import inner membrane translocase subunit TIM50, mitochondrial precursor.

CTDS1_HUMAN
θ value	1.52774e-15 (rank : 3)	NC score	0.677566 (rank : 4)
Query Neighborhood Hits	18	Target Neighborhood Hits	12	Shared Neighborhood Hits	8
SwissProt Accessions	Q9GZU7	Gene names	CTDSP1, NIF3, NLIIF
Domain Architecture
Description	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-interacting factor 3) (NLI-interacting factor 3) (NLI-IF).

CTDS1_MOUSE
θ value	1.52774e-15 (rank : 4)	NC score	0.677809 (rank : 3)
Query Neighborhood Hits	18	Target Neighborhood Hits	12	Shared Neighborhood Hits	8
SwissProt Accessions	P58466	Gene names	Ctdsp1, Nif3, Nliif
Domain Architecture
Description	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-interacting factor 3) (NLI-interacting factor 3) (Golli-interacting protein) (GIP).

CTDSL_MOUSE
θ value	1.99529e-15 (rank : 5)	NC score	0.675754 (rank : 6)
Query Neighborhood Hits	18	Target Neighborhood Hits	15	Shared Neighborhood Hits	8
SwissProt Accessions	P58465	Gene names	Ctdspl, Nif1, Nifl
Domain Architecture
Description	CTD small phosphatase-like protein (CTDSP-like) (Small C-terminal domain phosphatase 3) (Nuclear LIM interactor-interacting factor 1) (NLI-interacting factor 1) (NIF-like protein).

CTDSL_HUMAN
θ value	2.60593e-15 (rank : 6)	NC score	0.676190 (rank : 5)
Query Neighborhood Hits	18	Target Neighborhood Hits	11	Shared Neighborhood Hits	8
SwissProt Accessions	O15194, Q70KI4, Q7Z5Q2	Gene names	CTDSPL, C3orf8, NIF1, NIFL, YA22
Domain Architecture
Description	CTD small phosphatase-like protein (CTDSP-like) (Small C-terminal domain phosphatase 3) (Small CTD phosphatase 3) (SCP3) (Nuclear LIM interactor-interacting factor 1) (NLI-interacting factor 1) (NIF-like protein) (RBSP3) (YA22 protein) (HYA22).

CTDS2_HUMAN
θ value	2.0648e-12 (rank : 7)	NC score	0.661017 (rank : 8)
Query Neighborhood Hits	18	Target Neighborhood Hits	15	Shared Neighborhood Hits	8
SwissProt Accessions	O14595, Q6NZY3, Q9UEX1	Gene names	CTDSP2, NIF2, OS4
Domain Architecture
Description	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 (EC 3.1.3.16) (Small CTD phosphatase 2) (SCP2) (Nuclear LIM interactor-interacting factor 2) (NLI-interacting factor 2) (Protein OS-4).

CTDS2_MOUSE
θ value	2.69671e-12 (rank : 8)	NC score	0.661142 (rank : 7)
Query Neighborhood Hits	18	Target Neighborhood Hits	13	Shared Neighborhood Hits	8
SwissProt Accessions	Q8BX07	Gene names	Ctdsp2
Domain Architecture	No domain graphic available
Description	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 (EC 3.1.3.16).

MEGF8_HUMAN
θ value	0.0330416 (rank : 9)	NC score	0.047292 (rank : 11)
Query Neighborhood Hits	18	Target Neighborhood Hits	528	Shared Neighborhood Hits	3
SwissProt Accessions	Q7Z7M0, O75097	Gene names	MEGF8, EGFL4, KIAA0817
Domain Architecture
Description	Multiple epidermal growth factor-like domains 8 (EGF-like domain- containing protein 4) (Multiple EGF-like domain protein 4).

DYH11_HUMAN
θ value	0.21417 (rank : 10)	NC score	0.042587 (rank : 12)
Query Neighborhood Hits	18	Target Neighborhood Hits	234	Shared Neighborhood Hits	3
SwissProt Accessions	Q96DT5, Q9UJ82	Gene names	DNAH11
Domain Architecture
Description	Ciliary dynein heavy chain 11 (Axonemal beta dynein heavy chain 11).

CO5A1_HUMAN
θ value	2.36792 (rank : 11)	NC score	0.015959 (rank : 14)
Query Neighborhood Hits	18	Target Neighborhood Hits	434	Shared Neighborhood Hits	4
SwissProt Accessions	P20908, Q15094, Q5SUX4	Gene names	COL5A1
Domain Architecture
Description	Collagen alpha-1(V) chain precursor.

CO5A1_MOUSE
θ value	2.36792 (rank : 12)	NC score	0.015866 (rank : 15)
Query Neighborhood Hits	18	Target Neighborhood Hits	419	Shared Neighborhood Hits	4
SwissProt Accessions	O88207	Gene names	Col5a1
Domain Architecture	No domain graphic available
Description	Collagen alpha-1(V) chain precursor.

PRB4S_HUMAN
θ value	2.36792 (rank : 13)	NC score	0.014669 (rank : 18)
Query Neighborhood Hits	18	Target Neighborhood Hits	330	Shared Neighborhood Hits	1
SwissProt Accessions	P10163, P02813	Gene names	PRB4
Domain Architecture	No domain graphic available
Description	Basic salivary proline-rich protein 4 allele S precursor (Salivary proline-rich protein Po) (Parotid o protein) [Contains: Protein N1; Glycosylated protein A].

COHA1_MOUSE
θ value	3.0926 (rank : 14)	NC score	0.014891 (rank : 16)
Query Neighborhood Hits	18	Target Neighborhood Hits	414	Shared Neighborhood Hits	4
SwissProt Accessions	Q07563, Q99LK8	Gene names	Col17a1, Bp180, Bpag2
Domain Architecture
Description	Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen 2) (180 kDa bullous pemphigoid antigen 2).

LRSM1_MOUSE
θ value	3.0926 (rank : 15)	NC score	0.010060 (rank : 19)
Query Neighborhood Hits	18	Target Neighborhood Hits	874	Shared Neighborhood Hits	3
SwissProt Accessions	Q80ZI6	Gene names	Lrsam1
Domain Architecture	No domain graphic available
Description	Ubiquitin ligase protein LRSAM1 (EC 6.3.2.-) (Leucine-rich repeat and sterile alpha motif-containing protein 1) (Tsg101-associated ligase).

SGIP1_HUMAN
θ value	4.03905 (rank : 16)	NC score	0.022670 (rank : 13)
Query Neighborhood Hits	18	Target Neighborhood Hits	198	Shared Neighborhood Hits	2
SwissProt Accessions	Q9BQI5, Q4LE32, Q5VYE2, Q5VYE3, Q5VYE4, Q68D76, Q6MZY6, Q8IWC2	Gene names	SGIP1
Domain Architecture	No domain graphic available
Description	SH3-containing GRB2-like protein 3-interacting protein 1 (Endophilin- 3-interacting protein).

SYN3_MOUSE
θ value	4.03905 (rank : 17)	NC score	0.014824 (rank : 17)
Query Neighborhood Hits	18	Target Neighborhood Hits	200	Shared Neighborhood Hits	2
SwissProt Accessions	Q8JZP2	Gene names	Syn3
Domain Architecture	No domain graphic available
Description	Synapsin-3 (Synapsin III).

MRCKB_HUMAN
θ value	6.88961 (rank : 18)	NC score	-0.000570 (rank : 20)
Query Neighborhood Hits	18	Target Neighborhood Hits	2239	Shared Neighborhood Hits	3
SwissProt Accessions	Q9Y5S2, Q2L7A5, Q86TJ1, Q9ULU5	Gene names	CDC42BPB, KIAA1124
Domain Architecture	No domain graphic available
Description	Serine/threonine-protein kinase MRCK beta (EC 2.7.11.1) (CDC42-binding protein kinase beta) (Myotonic dystrophy kinase-related CDC42-binding kinase beta) (Myotonic dystrophy protein kinase-like beta) (MRCK beta) (DMPK-like beta).

CTDP1_HUMAN
θ value	θ > 10 (rank : 19)	NC score	0.079158 (rank : 10)
Query Neighborhood Hits	18	Target Neighborhood Hits	416	Shared Neighborhood Hits	9
SwissProt Accessions	Q9Y5B0, Q7Z644, Q96BZ1, Q9Y6F5	Gene names	CTDP1, FCP1
Domain Architecture
Description	RNA polymerase II subunit A C-terminal domain phosphatase (EC 3.1.3.16) (TFIIF-associating CTD phosphatase).

CTDP1_MOUSE
θ value	θ > 10 (rank : 20)	NC score	0.092691 (rank : 9)
Query Neighborhood Hits	18	Target Neighborhood Hits	146	Shared Neighborhood Hits	8
SwissProt Accessions	Q7TSG2, Q7TSS7, Q9D4S8	Gene names	Ctdp1, Fcp1
Domain Architecture
Description	RNA polymerase II subunit A C-terminal domain phosphatase (EC 3.1.3.16) (TFIIF-associating CTD phosphatase).

Hits sorted by NC score

TIM50_MOUSE
NC score	0.999962 (rank : 1)	θ value	1.19313e-177 (rank : 1)
Query Neighborhood Hits	18	Target Neighborhood Hits	18	Shared Neighborhood Hits	18
SwissProt Accessions	Q9D880, Q8R3A7, Q91Z17	Gene names	Timm50, Tim50
Domain Architecture	No domain graphic available
Description	Import inner membrane translocase subunit TIM50, mitochondrial precursor.

TIM50_HUMAN
NC score	0.997774 (rank : 2)	θ value	2.18449e-163 (rank : 2)
Query Neighborhood Hits	18	Target Neighborhood Hits	11	Shared Neighborhood Hits	10
SwissProt Accessions	Q3ZCQ8, Q6QA00, Q96FJ5, Q96GY2, Q9H370	Gene names	TIMM50, TIM50
Domain Architecture	No domain graphic available
Description	Import inner membrane translocase subunit TIM50, mitochondrial precursor.

CTDS1_MOUSE
NC score	0.677809 (rank : 3)	θ value	1.52774e-15 (rank : 4)
Query Neighborhood Hits	18	Target Neighborhood Hits	12	Shared Neighborhood Hits	8
SwissProt Accessions	P58466	Gene names	Ctdsp1, Nif3, Nliif
Domain Architecture
Description	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-interacting factor 3) (NLI-interacting factor 3) (Golli-interacting protein) (GIP).

CTDS1_HUMAN
NC score	0.677566 (rank : 4)	θ value	1.52774e-15 (rank : 3)
Query Neighborhood Hits	18	Target Neighborhood Hits	12	Shared Neighborhood Hits	8
SwissProt Accessions	Q9GZU7	Gene names	CTDSP1, NIF3, NLIIF
Domain Architecture
Description	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-interacting factor 3) (NLI-interacting factor 3) (NLI-IF).

CTDSL_HUMAN
NC score	0.676190 (rank : 5)	θ value	2.60593e-15 (rank : 6)
Query Neighborhood Hits	18	Target Neighborhood Hits	11	Shared Neighborhood Hits	8
SwissProt Accessions	O15194, Q70KI4, Q7Z5Q2	Gene names	CTDSPL, C3orf8, NIF1, NIFL, YA22
Domain Architecture
Description	CTD small phosphatase-like protein (CTDSP-like) (Small C-terminal domain phosphatase 3) (Small CTD phosphatase 3) (SCP3) (Nuclear LIM interactor-interacting factor 1) (NLI-interacting factor 1) (NIF-like protein) (RBSP3) (YA22 protein) (HYA22).

CTDSL_MOUSE
NC score	0.675754 (rank : 6)	θ value	1.99529e-15 (rank : 5)
Query Neighborhood Hits	18	Target Neighborhood Hits	15	Shared Neighborhood Hits	8
SwissProt Accessions	P58465	Gene names	Ctdspl, Nif1, Nifl
Domain Architecture
Description	CTD small phosphatase-like protein (CTDSP-like) (Small C-terminal domain phosphatase 3) (Nuclear LIM interactor-interacting factor 1) (NLI-interacting factor 1) (NIF-like protein).

CTDS2_MOUSE
NC score	0.661142 (rank : 7)	θ value	2.69671e-12 (rank : 8)
Query Neighborhood Hits	18	Target Neighborhood Hits	13	Shared Neighborhood Hits	8
SwissProt Accessions	Q8BX07	Gene names	Ctdsp2
Domain Architecture	No domain graphic available
Description	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 (EC 3.1.3.16).

CTDS2_HUMAN
NC score	0.661017 (rank : 8)	θ value	2.0648e-12 (rank : 7)
Query Neighborhood Hits	18	Target Neighborhood Hits	15	Shared Neighborhood Hits	8
SwissProt Accessions	O14595, Q6NZY3, Q9UEX1	Gene names	CTDSP2, NIF2, OS4
Domain Architecture
Description	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 (EC 3.1.3.16) (Small CTD phosphatase 2) (SCP2) (Nuclear LIM interactor-interacting factor 2) (NLI-interacting factor 2) (Protein OS-4).

CTDP1_MOUSE
NC score	0.092691 (rank : 9)	θ value	θ > 10 (rank : 20)
Query Neighborhood Hits	18	Target Neighborhood Hits	146	Shared Neighborhood Hits	8
SwissProt Accessions	Q7TSG2, Q7TSS7, Q9D4S8	Gene names	Ctdp1, Fcp1
Domain Architecture
Description	RNA polymerase II subunit A C-terminal domain phosphatase (EC 3.1.3.16) (TFIIF-associating CTD phosphatase).

CTDP1_HUMAN
NC score	0.079158 (rank : 10)	θ value	θ > 10 (rank : 19)
Query Neighborhood Hits	18	Target Neighborhood Hits	416	Shared Neighborhood Hits	9
SwissProt Accessions	Q9Y5B0, Q7Z644, Q96BZ1, Q9Y6F5	Gene names	CTDP1, FCP1
Domain Architecture
Description	RNA polymerase II subunit A C-terminal domain phosphatase (EC 3.1.3.16) (TFIIF-associating CTD phosphatase).

MEGF8_HUMAN
NC score	0.047292 (rank : 11)	θ value	0.0330416 (rank : 9)
Query Neighborhood Hits	18	Target Neighborhood Hits	528	Shared Neighborhood Hits	3
SwissProt Accessions	Q7Z7M0, O75097	Gene names	MEGF8, EGFL4, KIAA0817
Domain Architecture
Description	Multiple epidermal growth factor-like domains 8 (EGF-like domain- containing protein 4) (Multiple EGF-like domain protein 4).

DYH11_HUMAN
NC score	0.042587 (rank : 12)	θ value	0.21417 (rank : 10)
Query Neighborhood Hits	18	Target Neighborhood Hits	234	Shared Neighborhood Hits	3
SwissProt Accessions	Q96DT5, Q9UJ82	Gene names	DNAH11
Domain Architecture
Description	Ciliary dynein heavy chain 11 (Axonemal beta dynein heavy chain 11).

SGIP1_HUMAN
NC score	0.022670 (rank : 13)	θ value	4.03905 (rank : 16)
Query Neighborhood Hits	18	Target Neighborhood Hits	198	Shared Neighborhood Hits	2
SwissProt Accessions	Q9BQI5, Q4LE32, Q5VYE2, Q5VYE3, Q5VYE4, Q68D76, Q6MZY6, Q8IWC2	Gene names	SGIP1
Domain Architecture	No domain graphic available
Description	SH3-containing GRB2-like protein 3-interacting protein 1 (Endophilin- 3-interacting protein).

CO5A1_HUMAN
NC score	0.015959 (rank : 14)	θ value	2.36792 (rank : 11)
Query Neighborhood Hits	18	Target Neighborhood Hits	434	Shared Neighborhood Hits	4
SwissProt Accessions	P20908, Q15094, Q5SUX4	Gene names	COL5A1
Domain Architecture
Description	Collagen alpha-1(V) chain precursor.

CO5A1_MOUSE
NC score	0.015866 (rank : 15)	θ value	2.36792 (rank : 12)
Query Neighborhood Hits	18	Target Neighborhood Hits	419	Shared Neighborhood Hits	4
SwissProt Accessions	O88207	Gene names	Col5a1
Domain Architecture	No domain graphic available
Description	Collagen alpha-1(V) chain precursor.

COHA1_MOUSE
NC score	0.014891 (rank : 16)	θ value	3.0926 (rank : 14)
Query Neighborhood Hits	18	Target Neighborhood Hits	414	Shared Neighborhood Hits	4
SwissProt Accessions	Q07563, Q99LK8	Gene names	Col17a1, Bp180, Bpag2
Domain Architecture
Description	Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen 2) (180 kDa bullous pemphigoid antigen 2).

SYN3_MOUSE
NC score	0.014824 (rank : 17)	θ value	4.03905 (rank : 17)
Query Neighborhood Hits	18	Target Neighborhood Hits	200	Shared Neighborhood Hits	2
SwissProt Accessions	Q8JZP2	Gene names	Syn3
Domain Architecture	No domain graphic available
Description	Synapsin-3 (Synapsin III).

PRB4S_HUMAN
NC score	0.014669 (rank : 18)	θ value	2.36792 (rank : 13)
Query Neighborhood Hits	18	Target Neighborhood Hits	330	Shared Neighborhood Hits	1
SwissProt Accessions	P10163, P02813	Gene names	PRB4
Domain Architecture	No domain graphic available
Description	Basic salivary proline-rich protein 4 allele S precursor (Salivary proline-rich protein Po) (Parotid o protein) [Contains: Protein N1; Glycosylated protein A].

LRSM1_MOUSE
NC score	0.010060 (rank : 19)	θ value	3.0926 (rank : 15)
Query Neighborhood Hits	18	Target Neighborhood Hits	874	Shared Neighborhood Hits	3
SwissProt Accessions	Q80ZI6	Gene names	Lrsam1
Domain Architecture	No domain graphic available
Description	Ubiquitin ligase protein LRSAM1 (EC 6.3.2.-) (Leucine-rich repeat and sterile alpha motif-containing protein 1) (Tsg101-associated ligase).

MRCKB_HUMAN
NC score	-0.000570 (rank : 20)	θ value	6.88961 (rank : 18)
Query Neighborhood Hits	18	Target Neighborhood Hits	2239	Shared Neighborhood Hits	3
SwissProt Accessions	Q9Y5S2, Q2L7A5, Q86TJ1, Q9ULU5	Gene names	CDC42BPB, KIAA1124
Domain Architecture	No domain graphic available
Description	Serine/threonine-protein kinase MRCK beta (EC 2.7.11.1) (CDC42-binding protein kinase beta) (Myotonic dystrophy kinase-related CDC42-binding kinase beta) (Myotonic dystrophy protein kinase-like beta) (MRCK beta) (DMPK-like beta).