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Network neighborhood for query Sequence : CTDS1_MOUSE

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CTDS1_MOUSE
SwissProt Accessions	P58466	Gene names	Ctdsp1, Nif3, Nliif
Domain Architecture
Description	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-interacting factor 3) (NLI-interacting factor 3) (Golli-interacting protein) (GIP).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

CTDS1_MOUSE
θ value	5.58098e-151 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	12	Target Neighborhood Hits	12	Shared Neighborhood Hits	12
SwissProt Accessions	P58466	Gene names	Ctdsp1, Nif3, Nliif
Domain Architecture
Description	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-interacting factor 3) (NLI-interacting factor 3) (Golli-interacting protein) (GIP).

CTDS1_HUMAN
θ value	1.1637e-148 (rank : 2)	NC score	0.999956 (rank : 2)
Query Neighborhood Hits	12	Target Neighborhood Hits	12	Shared Neighborhood Hits	12
SwissProt Accessions	Q9GZU7	Gene names	CTDSP1, NIF3, NLIIF
Domain Architecture
Description	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-interacting factor 3) (NLI-interacting factor 3) (NLI-IF).

CTDSL_MOUSE
θ value	4.19693e-98 (rank : 3)	NC score	0.991536 (rank : 4)
Query Neighborhood Hits	12	Target Neighborhood Hits	15	Shared Neighborhood Hits	10
SwissProt Accessions	P58465	Gene names	Ctdspl, Nif1, Nifl
Domain Architecture
Description	CTD small phosphatase-like protein (CTDSP-like) (Small C-terminal domain phosphatase 3) (Nuclear LIM interactor-interacting factor 1) (NLI-interacting factor 1) (NIF-like protein).

CTDSL_HUMAN
θ value	1.3501e-96 (rank : 4)	NC score	0.992002 (rank : 3)
Query Neighborhood Hits	12	Target Neighborhood Hits	11	Shared Neighborhood Hits	10
SwissProt Accessions	O15194, Q70KI4, Q7Z5Q2	Gene names	CTDSPL, C3orf8, NIF1, NIFL, YA22
Domain Architecture
Description	CTD small phosphatase-like protein (CTDSP-like) (Small C-terminal domain phosphatase 3) (Small CTD phosphatase 3) (SCP3) (Nuclear LIM interactor-interacting factor 1) (NLI-interacting factor 1) (NIF-like protein) (RBSP3) (YA22 protein) (HYA22).

CTDS2_HUMAN
θ value	6.95003e-85 (rank : 5)	NC score	0.985628 (rank : 5)
Query Neighborhood Hits	12	Target Neighborhood Hits	15	Shared Neighborhood Hits	12
SwissProt Accessions	O14595, Q6NZY3, Q9UEX1	Gene names	CTDSP2, NIF2, OS4
Domain Architecture
Description	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 (EC 3.1.3.16) (Small CTD phosphatase 2) (SCP2) (Nuclear LIM interactor-interacting factor 2) (NLI-interacting factor 2) (Protein OS-4).

CTDS2_MOUSE
θ value	1.31072e-83 (rank : 6)	NC score	0.985003 (rank : 6)
Query Neighborhood Hits	12	Target Neighborhood Hits	13	Shared Neighborhood Hits	10
SwissProt Accessions	Q8BX07	Gene names	Ctdsp2
Domain Architecture	No domain graphic available
Description	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 (EC 3.1.3.16).

TIM50_MOUSE
θ value	1.52774e-15 (rank : 7)	NC score	0.677809 (rank : 8)
Query Neighborhood Hits	12	Target Neighborhood Hits	18	Shared Neighborhood Hits	8
SwissProt Accessions	Q9D880, Q8R3A7, Q91Z17	Gene names	Timm50, Tim50
Domain Architecture	No domain graphic available
Description	Import inner membrane translocase subunit TIM50, mitochondrial precursor.

TIM50_HUMAN
θ value	5.8054e-15 (rank : 8)	NC score	0.684001 (rank : 7)
Query Neighborhood Hits	12	Target Neighborhood Hits	11	Shared Neighborhood Hits	8
SwissProt Accessions	Q3ZCQ8, Q6QA00, Q96FJ5, Q96GY2, Q9H370	Gene names	TIMM50, TIM50
Domain Architecture	No domain graphic available
Description	Import inner membrane translocase subunit TIM50, mitochondrial precursor.

CTDP1_MOUSE
θ value	5.44631e-05 (rank : 9)	NC score	0.275431 (rank : 9)
Query Neighborhood Hits	12	Target Neighborhood Hits	146	Shared Neighborhood Hits	8
SwissProt Accessions	Q7TSG2, Q7TSS7, Q9D4S8	Gene names	Ctdp1, Fcp1
Domain Architecture
Description	RNA polymerase II subunit A C-terminal domain phosphatase (EC 3.1.3.16) (TFIIF-associating CTD phosphatase).

CTDP1_HUMAN
θ value	0.00020696 (rank : 10)	NC score	0.230524 (rank : 10)
Query Neighborhood Hits	12	Target Neighborhood Hits	416	Shared Neighborhood Hits	8
SwissProt Accessions	Q9Y5B0, Q7Z644, Q96BZ1, Q9Y6F5	Gene names	CTDP1, FCP1
Domain Architecture
Description	RNA polymerase II subunit A C-terminal domain phosphatase (EC 3.1.3.16) (TFIIF-associating CTD phosphatase).

UBXD8_HUMAN
θ value	2.36792 (rank : 11)	NC score	0.045591 (rank : 12)
Query Neighborhood Hits	12	Target Neighborhood Hits	131	Shared Neighborhood Hits	5
SwissProt Accessions	Q96CS3, O94963, Q8IUF2, Q9BRP2, Q9BVM7	Gene names	UBXD8, ETEA, KIAA0887
Domain Architecture	No domain graphic available
Description	UBX domain-containing protein 8 (Protein ETEA).

UBXD8_MOUSE
θ value	2.36792 (rank : 12)	NC score	0.045630 (rank : 11)
Query Neighborhood Hits	12	Target Neighborhood Hits	133	Shared Neighborhood Hits	5
SwissProt Accessions	Q3TDN2, Q3U9W2, Q80TP7, Q80W42	Gene names	Ubxd8, Kiaa0887
Domain Architecture	No domain graphic available
Description	UBX domain-containing protein 8.

Hits sorted by NC score

CTDS1_MOUSE
NC score	0.999962 (rank : 1)	θ value	5.58098e-151 (rank : 1)
Query Neighborhood Hits	12	Target Neighborhood Hits	12	Shared Neighborhood Hits	12
SwissProt Accessions	P58466	Gene names	Ctdsp1, Nif3, Nliif
Domain Architecture
Description	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-interacting factor 3) (NLI-interacting factor 3) (Golli-interacting protein) (GIP).

CTDS1_HUMAN
NC score	0.999956 (rank : 2)	θ value	1.1637e-148 (rank : 2)
Query Neighborhood Hits	12	Target Neighborhood Hits	12	Shared Neighborhood Hits	12
SwissProt Accessions	Q9GZU7	Gene names	CTDSP1, NIF3, NLIIF
Domain Architecture
Description	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-interacting factor 3) (NLI-interacting factor 3) (NLI-IF).

CTDSL_HUMAN
NC score	0.992002 (rank : 3)	θ value	1.3501e-96 (rank : 4)
Query Neighborhood Hits	12	Target Neighborhood Hits	11	Shared Neighborhood Hits	10
SwissProt Accessions	O15194, Q70KI4, Q7Z5Q2	Gene names	CTDSPL, C3orf8, NIF1, NIFL, YA22
Domain Architecture
Description	CTD small phosphatase-like protein (CTDSP-like) (Small C-terminal domain phosphatase 3) (Small CTD phosphatase 3) (SCP3) (Nuclear LIM interactor-interacting factor 1) (NLI-interacting factor 1) (NIF-like protein) (RBSP3) (YA22 protein) (HYA22).

CTDSL_MOUSE
NC score	0.991536 (rank : 4)	θ value	4.19693e-98 (rank : 3)
Query Neighborhood Hits	12	Target Neighborhood Hits	15	Shared Neighborhood Hits	10
SwissProt Accessions	P58465	Gene names	Ctdspl, Nif1, Nifl
Domain Architecture
Description	CTD small phosphatase-like protein (CTDSP-like) (Small C-terminal domain phosphatase 3) (Nuclear LIM interactor-interacting factor 1) (NLI-interacting factor 1) (NIF-like protein).

CTDS2_HUMAN
NC score	0.985628 (rank : 5)	θ value	6.95003e-85 (rank : 5)
Query Neighborhood Hits	12	Target Neighborhood Hits	15	Shared Neighborhood Hits	12
SwissProt Accessions	O14595, Q6NZY3, Q9UEX1	Gene names	CTDSP2, NIF2, OS4
Domain Architecture
Description	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 (EC 3.1.3.16) (Small CTD phosphatase 2) (SCP2) (Nuclear LIM interactor-interacting factor 2) (NLI-interacting factor 2) (Protein OS-4).

CTDS2_MOUSE
NC score	0.985003 (rank : 6)	θ value	1.31072e-83 (rank : 6)
Query Neighborhood Hits	12	Target Neighborhood Hits	13	Shared Neighborhood Hits	10
SwissProt Accessions	Q8BX07	Gene names	Ctdsp2
Domain Architecture	No domain graphic available
Description	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 (EC 3.1.3.16).

TIM50_HUMAN
NC score	0.684001 (rank : 7)	θ value	5.8054e-15 (rank : 8)
Query Neighborhood Hits	12	Target Neighborhood Hits	11	Shared Neighborhood Hits	8
SwissProt Accessions	Q3ZCQ8, Q6QA00, Q96FJ5, Q96GY2, Q9H370	Gene names	TIMM50, TIM50
Domain Architecture	No domain graphic available
Description	Import inner membrane translocase subunit TIM50, mitochondrial precursor.

TIM50_MOUSE
NC score	0.677809 (rank : 8)	θ value	1.52774e-15 (rank : 7)
Query Neighborhood Hits	12	Target Neighborhood Hits	18	Shared Neighborhood Hits	8
SwissProt Accessions	Q9D880, Q8R3A7, Q91Z17	Gene names	Timm50, Tim50
Domain Architecture	No domain graphic available
Description	Import inner membrane translocase subunit TIM50, mitochondrial precursor.

CTDP1_MOUSE
NC score	0.275431 (rank : 9)	θ value	5.44631e-05 (rank : 9)
Query Neighborhood Hits	12	Target Neighborhood Hits	146	Shared Neighborhood Hits	8
SwissProt Accessions	Q7TSG2, Q7TSS7, Q9D4S8	Gene names	Ctdp1, Fcp1
Domain Architecture
Description	RNA polymerase II subunit A C-terminal domain phosphatase (EC 3.1.3.16) (TFIIF-associating CTD phosphatase).

CTDP1_HUMAN
NC score	0.230524 (rank : 10)	θ value	0.00020696 (rank : 10)
Query Neighborhood Hits	12	Target Neighborhood Hits	416	Shared Neighborhood Hits	8
SwissProt Accessions	Q9Y5B0, Q7Z644, Q96BZ1, Q9Y6F5	Gene names	CTDP1, FCP1
Domain Architecture
Description	RNA polymerase II subunit A C-terminal domain phosphatase (EC 3.1.3.16) (TFIIF-associating CTD phosphatase).

UBXD8_MOUSE
NC score	0.045630 (rank : 11)	θ value	2.36792 (rank : 12)
Query Neighborhood Hits	12	Target Neighborhood Hits	133	Shared Neighborhood Hits	5
SwissProt Accessions	Q3TDN2, Q3U9W2, Q80TP7, Q80W42	Gene names	Ubxd8, Kiaa0887
Domain Architecture	No domain graphic available
Description	UBX domain-containing protein 8.

UBXD8_HUMAN
NC score	0.045591 (rank : 12)	θ value	2.36792 (rank : 11)
Query Neighborhood Hits	12	Target Neighborhood Hits	131	Shared Neighborhood Hits	5
SwissProt Accessions	Q96CS3, O94963, Q8IUF2, Q9BRP2, Q9BVM7	Gene names	UBXD8, ETEA, KIAA0887
Domain Architecture	No domain graphic available
Description	UBX domain-containing protein 8 (Protein ETEA).