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Network neighborhood for query Sequence : TDG_MOUSE

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TDG_MOUSE
SwissProt Accessions	P56581	Gene names	Tdg
Domain Architecture
Description	G/T mismatch-specific thymine DNA glycosylase (EC 3.2.2.-) (C-JUN leucine zipper interactive protein JZA-3).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

TDG_MOUSE
θ value	0 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	20	Target Neighborhood Hits	20	Shared Neighborhood Hits	20
SwissProt Accessions	P56581	Gene names	Tdg
Domain Architecture
Description	G/T mismatch-specific thymine DNA glycosylase (EC 3.2.2.-) (C-JUN leucine zipper interactive protein JZA-3).

TDG_HUMAN
θ value	2.49359e-167 (rank : 2)	NC score	0.990772 (rank : 2)
Query Neighborhood Hits	20	Target Neighborhood Hits	23	Shared Neighborhood Hits	9
SwissProt Accessions	Q13569, Q8IUZ6, Q8IZM3	Gene names	TDG
Domain Architecture
Description	G/T mismatch-specific thymine DNA glycosylase (EC 3.2.2.-).

NFH_MOUSE
θ value	0.125558 (rank : 3)	NC score	0.026790 (rank : 9)
Query Neighborhood Hits	20	Target Neighborhood Hits	2247	Shared Neighborhood Hits	12
SwissProt Accessions	P19246, Q5SVF6, Q61959	Gene names	Nefh, Nfh
Domain Architecture
Description	Neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H).

NP1L3_MOUSE
θ value	0.62314 (rank : 4)	NC score	0.057530 (rank : 3)
Query Neighborhood Hits	20	Target Neighborhood Hits	233	Shared Neighborhood Hits	7
SwissProt Accessions	Q794H2, O54802	Gene names	Nap1l3, Mb20
Domain Architecture	No domain graphic available
Description	Nucleosome assembly protein 1-like 3 (Brain-specific protein MB20).

RBBP6_HUMAN
θ value	1.38821 (rank : 5)	NC score	0.038171 (rank : 6)
Query Neighborhood Hits	20	Target Neighborhood Hits	1135	Shared Neighborhood Hits	10
SwissProt Accessions	Q7Z6E9, Q15290, Q6DKH4, Q6P4C2, Q6YNC9, Q7Z6E8, Q8N0V2, Q96PH3, Q9H3I8, Q9H5M5, Q9NPX4	Gene names	RBBP6, P2PR, PACT, RBQ1
Domain Architecture	No domain graphic available
Description	Retinoblastoma-binding protein 6 (p53-associated cellular protein of testis) (Proliferation potential-related protein) (Protein P2P-R) (Retinoblastoma-binding Q protein 1) (Protein RBQ-1).

RNH2B_HUMAN
θ value	1.38821 (rank : 6)	NC score	0.048145 (rank : 5)
Query Neighborhood Hits	20	Target Neighborhood Hits	18	Shared Neighborhood Hits	2
SwissProt Accessions	Q5TBB1, Q6PK48, Q9HAF7	Gene names	RNASEH2B, DLEU8
Domain Architecture	No domain graphic available
Description	Ribonuclease H2 subunit B (RNase H2 subunit B) (Ribonuclease HI subunit B) (Aicardi-Goutieres syndrome 2 protein) (AGS2) (Deleted in lymphocytic leukemia 8).

MBB1A_HUMAN
θ value	1.81305 (rank : 7)	NC score	0.034710 (rank : 7)
Query Neighborhood Hits	20	Target Neighborhood Hits	665	Shared Neighborhood Hits	7
SwissProt Accessions	Q9BQG0, Q86VM3, Q9BW49, Q9P0V5, Q9UF99	Gene names	MYBBP1A, P160
Domain Architecture	No domain graphic available
Description	Myb-binding protein 1A.

SKI_MOUSE
θ value	1.81305 (rank : 8)	NC score	0.024117 (rank : 10)
Query Neighborhood Hits	20	Target Neighborhood Hits	423	Shared Neighborhood Hits	2
SwissProt Accessions	Q60698, Q8VIL5	Gene names	Ski
Domain Architecture	No domain graphic available
Description	Ski oncogene (C-ski).

PGBM_MOUSE
θ value	2.36792 (rank : 9)	NC score	0.010940 (rank : 18)
Query Neighborhood Hits	20	Target Neighborhood Hits	1073	Shared Neighborhood Hits	3
SwissProt Accessions	Q05793	Gene names	Hspg2
Domain Architecture
Description	Basement membrane-specific heparan sulfate proteoglycan core protein precursor (HSPG) (Perlecan) (PLC).

TTF1_MOUSE
θ value	2.36792 (rank : 10)	NC score	0.049887 (rank : 4)
Query Neighborhood Hits	20	Target Neighborhood Hits	277	Shared Neighborhood Hits	6
SwissProt Accessions	Q62187, Q9JKK5	Gene names	Ttf1
Domain Architecture	No domain graphic available
Description	Transcription termination factor 1 (TTF-1) (TTF-I) (mTFF-I) (RNA polymerase I termination factor).

CABYR_MOUSE
θ value	4.03905 (rank : 11)	NC score	0.030205 (rank : 8)
Query Neighborhood Hits	20	Target Neighborhood Hits	80	Shared Neighborhood Hits	2
SwissProt Accessions	Q9D424, Q91Y41, Q91Y42	Gene names	Cabyr, Cbp86
Domain Architecture	No domain graphic available
Description	Calcium-binding tyrosine phosphorylation-regulated protein (Calcium- binding protein 86) (Testis-specific calcium-binding protein CBP86).

TARA_HUMAN
θ value	5.27518 (rank : 12)	NC score	0.013011 (rank : 15)
Query Neighborhood Hits	20	Target Neighborhood Hits	1626	Shared Neighborhood Hits	5
SwissProt Accessions	Q9H2D6, O94797, Q2PZW8, Q2Q3Z9, Q2Q400, Q5R3M6, Q96DW1, Q9BT77, Q9BTL7, Q9BY98, Q9Y3L4	Gene names	TRIOBP, KIAA1662, TARA
Domain Architecture
Description	TRIO and F-actin-binding protein (Protein Tara) (Trio-associated repeat on actin).

TBX15_HUMAN
θ value	5.27518 (rank : 13)	NC score	0.019686 (rank : 12)
Query Neighborhood Hits	20	Target Neighborhood Hits	54	Shared Neighborhood Hits	4
SwissProt Accessions	Q96SF7, Q5T9S7	Gene names	TBX15, TBX14
Domain Architecture	No domain graphic available
Description	T-box transcription factor TBX15 (T-box protein 15).

TBX15_MOUSE
θ value	5.27518 (rank : 14)	NC score	0.019731 (rank : 11)
Query Neighborhood Hits	20	Target Neighborhood Hits	54	Shared Neighborhood Hits	4
SwissProt Accessions	O70306, O54840	Gene names	Tbx15, Tbx14, Tbx8
Domain Architecture
Description	T-box transcription factor TBX15 (T-box protein 15) (MmTBx8).

TCAL5_HUMAN
θ value	5.27518 (rank : 15)	NC score	0.015758 (rank : 13)
Query Neighborhood Hits	20	Target Neighborhood Hits	806	Shared Neighborhood Hits	7
SwissProt Accessions	Q5H9L2	Gene names	TCEAL5
Domain Architecture	No domain graphic available
Description	Transcription elongation factor A protein-like 5 (TCEA-like protein 5) (Transcription elongation factor S-II protein-like 5).

TSH1_MOUSE
θ value	6.88961 (rank : 16)	NC score	0.012763 (rank : 16)
Query Neighborhood Hits	20	Target Neighborhood Hits	675	Shared Neighborhood Hits	5
SwissProt Accessions	Q5DTH5, Q6PE60, Q8VD19, Q9JLD5	Gene names	Tshz1, Kiaa4206, Sdccag33, Tsh1
Domain Architecture	No domain graphic available
Description	Teashirt homolog 1 (Serologically defined colon cancer antigen 3 homolog).

AFF2_MOUSE
θ value	8.99809 (rank : 17)	NC score	0.015147 (rank : 14)
Query Neighborhood Hits	20	Target Neighborhood Hits	225	Shared Neighborhood Hits	6
SwissProt Accessions	O55112	Gene names	Aff2, Fmr2, Ox19
Domain Architecture
Description	AF4/FMR2 family member 2 (Fragile X mental retardation protein 2 homolog) (Protein FMR-2) (FMR2P) (Protein Ox19).

FMN1B_MOUSE
θ value	8.99809 (rank : 18)	NC score	0.011804 (rank : 17)
Query Neighborhood Hits	20	Target Neighborhood Hits	447	Shared Neighborhood Hits	5
SwissProt Accessions	Q05859	Gene names	Fmn, Ld
Domain Architecture
Description	Formin-1 isoform IV (Limb deformity protein).

JAD1A_HUMAN
θ value	8.99809 (rank : 19)	NC score	0.008292 (rank : 20)
Query Neighborhood Hits	20	Target Neighborhood Hits	328	Shared Neighborhood Hits	4
SwissProt Accessions	P29375	Gene names	JARID1A, RBBP2, RBP2
Domain Architecture
Description	Jumonji/ARID domain-containing protein 1A (Retinoblastoma-binding protein 2) (RBBP-2).

TF65_MOUSE
θ value	8.99809 (rank : 20)	NC score	0.009930 (rank : 19)
Query Neighborhood Hits	20	Target Neighborhood Hits	66	Shared Neighborhood Hits	2
SwissProt Accessions	Q04207, Q62025	Gene names	Rela, Nfkb3
Domain Architecture
Description	Transcription factor p65 (Nuclear factor NF-kappa-B p65 subunit).

Hits sorted by NC score

TDG_MOUSE
NC score	0.999962 (rank : 1)	θ value	0 (rank : 1)
Query Neighborhood Hits	20	Target Neighborhood Hits	20	Shared Neighborhood Hits	20
SwissProt Accessions	P56581	Gene names	Tdg
Domain Architecture
Description	G/T mismatch-specific thymine DNA glycosylase (EC 3.2.2.-) (C-JUN leucine zipper interactive protein JZA-3).

TDG_HUMAN
NC score	0.990772 (rank : 2)	θ value	2.49359e-167 (rank : 2)
Query Neighborhood Hits	20	Target Neighborhood Hits	23	Shared Neighborhood Hits	9
SwissProt Accessions	Q13569, Q8IUZ6, Q8IZM3	Gene names	TDG
Domain Architecture
Description	G/T mismatch-specific thymine DNA glycosylase (EC 3.2.2.-).

NP1L3_MOUSE
NC score	0.057530 (rank : 3)	θ value	0.62314 (rank : 4)
Query Neighborhood Hits	20	Target Neighborhood Hits	233	Shared Neighborhood Hits	7
SwissProt Accessions	Q794H2, O54802	Gene names	Nap1l3, Mb20
Domain Architecture	No domain graphic available
Description	Nucleosome assembly protein 1-like 3 (Brain-specific protein MB20).

TTF1_MOUSE
NC score	0.049887 (rank : 4)	θ value	2.36792 (rank : 10)
Query Neighborhood Hits	20	Target Neighborhood Hits	277	Shared Neighborhood Hits	6
SwissProt Accessions	Q62187, Q9JKK5	Gene names	Ttf1
Domain Architecture	No domain graphic available
Description	Transcription termination factor 1 (TTF-1) (TTF-I) (mTFF-I) (RNA polymerase I termination factor).

RNH2B_HUMAN
NC score	0.048145 (rank : 5)	θ value	1.38821 (rank : 6)
Query Neighborhood Hits	20	Target Neighborhood Hits	18	Shared Neighborhood Hits	2
SwissProt Accessions	Q5TBB1, Q6PK48, Q9HAF7	Gene names	RNASEH2B, DLEU8
Domain Architecture	No domain graphic available
Description	Ribonuclease H2 subunit B (RNase H2 subunit B) (Ribonuclease HI subunit B) (Aicardi-Goutieres syndrome 2 protein) (AGS2) (Deleted in lymphocytic leukemia 8).

RBBP6_HUMAN
NC score	0.038171 (rank : 6)	θ value	1.38821 (rank : 5)
Query Neighborhood Hits	20	Target Neighborhood Hits	1135	Shared Neighborhood Hits	10
SwissProt Accessions	Q7Z6E9, Q15290, Q6DKH4, Q6P4C2, Q6YNC9, Q7Z6E8, Q8N0V2, Q96PH3, Q9H3I8, Q9H5M5, Q9NPX4	Gene names	RBBP6, P2PR, PACT, RBQ1
Domain Architecture	No domain graphic available
Description	Retinoblastoma-binding protein 6 (p53-associated cellular protein of testis) (Proliferation potential-related protein) (Protein P2P-R) (Retinoblastoma-binding Q protein 1) (Protein RBQ-1).

MBB1A_HUMAN
NC score	0.034710 (rank : 7)	θ value	1.81305 (rank : 7)
Query Neighborhood Hits	20	Target Neighborhood Hits	665	Shared Neighborhood Hits	7
SwissProt Accessions	Q9BQG0, Q86VM3, Q9BW49, Q9P0V5, Q9UF99	Gene names	MYBBP1A, P160
Domain Architecture	No domain graphic available
Description	Myb-binding protein 1A.

CABYR_MOUSE
NC score	0.030205 (rank : 8)	θ value	4.03905 (rank : 11)
Query Neighborhood Hits	20	Target Neighborhood Hits	80	Shared Neighborhood Hits	2
SwissProt Accessions	Q9D424, Q91Y41, Q91Y42	Gene names	Cabyr, Cbp86
Domain Architecture	No domain graphic available
Description	Calcium-binding tyrosine phosphorylation-regulated protein (Calcium- binding protein 86) (Testis-specific calcium-binding protein CBP86).

NFH_MOUSE
NC score	0.026790 (rank : 9)	θ value	0.125558 (rank : 3)
Query Neighborhood Hits	20	Target Neighborhood Hits	2247	Shared Neighborhood Hits	12
SwissProt Accessions	P19246, Q5SVF6, Q61959	Gene names	Nefh, Nfh
Domain Architecture
Description	Neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H).

SKI_MOUSE
NC score	0.024117 (rank : 10)	θ value	1.81305 (rank : 8)
Query Neighborhood Hits	20	Target Neighborhood Hits	423	Shared Neighborhood Hits	2
SwissProt Accessions	Q60698, Q8VIL5	Gene names	Ski
Domain Architecture	No domain graphic available
Description	Ski oncogene (C-ski).

TBX15_MOUSE
NC score	0.019731 (rank : 11)	θ value	5.27518 (rank : 14)
Query Neighborhood Hits	20	Target Neighborhood Hits	54	Shared Neighborhood Hits	4
SwissProt Accessions	O70306, O54840	Gene names	Tbx15, Tbx14, Tbx8
Domain Architecture
Description	T-box transcription factor TBX15 (T-box protein 15) (MmTBx8).

TBX15_HUMAN
NC score	0.019686 (rank : 12)	θ value	5.27518 (rank : 13)
Query Neighborhood Hits	20	Target Neighborhood Hits	54	Shared Neighborhood Hits	4
SwissProt Accessions	Q96SF7, Q5T9S7	Gene names	TBX15, TBX14
Domain Architecture	No domain graphic available
Description	T-box transcription factor TBX15 (T-box protein 15).

TCAL5_HUMAN
NC score	0.015758 (rank : 13)	θ value	5.27518 (rank : 15)
Query Neighborhood Hits	20	Target Neighborhood Hits	806	Shared Neighborhood Hits	7
SwissProt Accessions	Q5H9L2	Gene names	TCEAL5
Domain Architecture	No domain graphic available
Description	Transcription elongation factor A protein-like 5 (TCEA-like protein 5) (Transcription elongation factor S-II protein-like 5).

AFF2_MOUSE
NC score	0.015147 (rank : 14)	θ value	8.99809 (rank : 17)
Query Neighborhood Hits	20	Target Neighborhood Hits	225	Shared Neighborhood Hits	6
SwissProt Accessions	O55112	Gene names	Aff2, Fmr2, Ox19
Domain Architecture
Description	AF4/FMR2 family member 2 (Fragile X mental retardation protein 2 homolog) (Protein FMR-2) (FMR2P) (Protein Ox19).

TARA_HUMAN
NC score	0.013011 (rank : 15)	θ value	5.27518 (rank : 12)
Query Neighborhood Hits	20	Target Neighborhood Hits	1626	Shared Neighborhood Hits	5
SwissProt Accessions	Q9H2D6, O94797, Q2PZW8, Q2Q3Z9, Q2Q400, Q5R3M6, Q96DW1, Q9BT77, Q9BTL7, Q9BY98, Q9Y3L4	Gene names	TRIOBP, KIAA1662, TARA
Domain Architecture
Description	TRIO and F-actin-binding protein (Protein Tara) (Trio-associated repeat on actin).

TSH1_MOUSE
NC score	0.012763 (rank : 16)	θ value	6.88961 (rank : 16)
Query Neighborhood Hits	20	Target Neighborhood Hits	675	Shared Neighborhood Hits	5
SwissProt Accessions	Q5DTH5, Q6PE60, Q8VD19, Q9JLD5	Gene names	Tshz1, Kiaa4206, Sdccag33, Tsh1
Domain Architecture	No domain graphic available
Description	Teashirt homolog 1 (Serologically defined colon cancer antigen 3 homolog).

FMN1B_MOUSE
NC score	0.011804 (rank : 17)	θ value	8.99809 (rank : 18)
Query Neighborhood Hits	20	Target Neighborhood Hits	447	Shared Neighborhood Hits	5
SwissProt Accessions	Q05859	Gene names	Fmn, Ld
Domain Architecture
Description	Formin-1 isoform IV (Limb deformity protein).

PGBM_MOUSE
NC score	0.010940 (rank : 18)	θ value	2.36792 (rank : 9)
Query Neighborhood Hits	20	Target Neighborhood Hits	1073	Shared Neighborhood Hits	3
SwissProt Accessions	Q05793	Gene names	Hspg2
Domain Architecture
Description	Basement membrane-specific heparan sulfate proteoglycan core protein precursor (HSPG) (Perlecan) (PLC).

TF65_MOUSE
NC score	0.009930 (rank : 19)	θ value	8.99809 (rank : 20)
Query Neighborhood Hits	20	Target Neighborhood Hits	66	Shared Neighborhood Hits	2
SwissProt Accessions	Q04207, Q62025	Gene names	Rela, Nfkb3
Domain Architecture
Description	Transcription factor p65 (Nuclear factor NF-kappa-B p65 subunit).

JAD1A_HUMAN
NC score	0.008292 (rank : 20)	θ value	8.99809 (rank : 19)
Query Neighborhood Hits	20	Target Neighborhood Hits	328	Shared Neighborhood Hits	4
SwissProt Accessions	P29375	Gene names	JARID1A, RBBP2, RBP2
Domain Architecture
Description	Jumonji/ARID domain-containing protein 1A (Retinoblastoma-binding protein 2) (RBBP-2).