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Network neighborhood for query Sequence : RO60_MOUSE

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RO60_MOUSE
SwissProt Accessions	O08848, Q9QYD8	Gene names	Trove2, Ssa2
Domain Architecture
Description	60 kDa SS-A/Ro ribonucleoprotein (60 kDa Ro protein) (60 kDa ribonucleoprotein Ro) (RoRNP) (TROVE domain family member 2).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

RO60_HUMAN
θ value	0 (rank : 1)	NC score	0.994077 (rank : 2)
Query Neighborhood Hits	15	Target Neighborhood Hits	6	Shared Neighborhood Hits	4
SwissProt Accessions	P10155, Q92787, Q9H1W6	Gene names	TROVE2, RO60, SSA2
Domain Architecture
Description	60 kDa SS-A/Ro ribonucleoprotein (60 kDa Ro protein) (60 kDa ribonucleoprotein Ro) (RoRNP) (Ro 60 kDa autoantigen) (TROVE domain family member 2) (Sjoegren syndrome type A antigen) (SS-A) (Sjoegren syndrome antigen A2).

RO60_MOUSE
θ value	0 (rank : 2)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	15	Target Neighborhood Hits	15	Shared Neighborhood Hits	15
SwissProt Accessions	O08848, Q9QYD8	Gene names	Trove2, Ssa2
Domain Architecture
Description	60 kDa SS-A/Ro ribonucleoprotein (60 kDa Ro protein) (60 kDa ribonucleoprotein Ro) (RoRNP) (TROVE domain family member 2).

TTC3_HUMAN
θ value	0.00509761 (rank : 3)	NC score	0.070661 (rank : 4)
Query Neighborhood Hits	15	Target Neighborhood Hits	664	Shared Neighborhood Hits	7
SwissProt Accessions	P53804, O60767, P78476, P78477	Gene names	TTC3, TPRD
Domain Architecture
Description	Tetratricopeptide repeat protein 3 (TPR repeat protein 3) (TPR repeat protein D).

ENKUR_MOUSE
θ value	0.813845 (rank : 4)	NC score	0.081715 (rank : 3)
Query Neighborhood Hits	15	Target Neighborhood Hits	51	Shared Neighborhood Hits	4
SwissProt Accessions	Q6SP97	Gene names
Domain Architecture	No domain graphic available
Description	Enkurin.

SPTA2_HUMAN
θ value	0.813845 (rank : 5)	NC score	0.015782 (rank : 7)
Query Neighborhood Hits	15	Target Neighborhood Hits	888	Shared Neighborhood Hits	7
SwissProt Accessions	Q13813, Q13186, Q15324, Q16606, Q59EF1, Q5VXV5, Q5VXV6, Q7Z6M5, Q9P0V0	Gene names	SPTAN1, SPTA2
Domain Architecture
Description	Spectrin alpha chain, brain (Spectrin, non-erythroid alpha chain) (Alpha-II spectrin) (Fodrin alpha chain).

ENKUR_HUMAN
θ value	1.06291 (rank : 6)	NC score	0.069322 (rank : 5)
Query Neighborhood Hits	15	Target Neighborhood Hits	64	Shared Neighborhood Hits	3
SwissProt Accessions	Q8TC29	Gene names	C10orf63
Domain Architecture	No domain graphic available
Description	Enkurin.

STAB2_MOUSE
θ value	1.81305 (rank : 7)	NC score	0.011934 (rank : 14)
Query Neighborhood Hits	15	Target Neighborhood Hits	528	Shared Neighborhood Hits	2
SwissProt Accessions	Q8R4U0, Q8BM87	Gene names	Stab2
Domain Architecture	No domain graphic available
Description	Stabilin-2 precursor [Contains: Short form stabilin-2].

FLIP1_MOUSE
θ value	2.36792 (rank : 8)	NC score	0.016521 (rank : 6)
Query Neighborhood Hits	15	Target Neighborhood Hits	1176	Shared Neighborhood Hits	8
SwissProt Accessions	Q9CS72	Gene names	Filip1
Domain Architecture	No domain graphic available
Description	Filamin-A-interacting protein 1 (FILIP).

AMPE_HUMAN
θ value	4.03905 (rank : 9)	NC score	0.012524 (rank : 13)
Query Neighborhood Hits	15	Target Neighborhood Hits	46	Shared Neighborhood Hits	2
SwissProt Accessions	Q07075	Gene names	ENPEP
Domain Architecture
Description	Glutamyl aminopeptidase (EC 3.4.11.7) (EAP) (Aminopeptidase A) (APA) (Differentiation antigen gp160) (CD249 antigen).

WNT3_HUMAN
θ value	4.03905 (rank : 10)	NC score	0.013310 (rank : 12)
Query Neighborhood Hits	15	Target Neighborhood Hits	46	Shared Neighborhood Hits	4
SwissProt Accessions	P56703, Q9H1J9	Gene names	WNT3, INT4
Domain Architecture
Description	Proto-oncogene protein Wnt-3 precursor.

FLIP1_HUMAN
θ value	5.27518 (rank : 11)	NC score	0.014189 (rank : 11)
Query Neighborhood Hits	15	Target Neighborhood Hits	1405	Shared Neighborhood Hits	8
SwissProt Accessions	Q7Z7B0, Q5VUL6, Q86TC3, Q8N8B9, Q96SK6, Q9NVI8, Q9ULE5	Gene names	FILIP1, KIAA1275
Domain Architecture	No domain graphic available
Description	Filamin-A-interacting protein 1 (FILIP).

SMC4_MOUSE
θ value	5.27518 (rank : 12)	NC score	0.015234 (rank : 8)
Query Neighborhood Hits	15	Target Neighborhood Hits	830	Shared Neighborhood Hits	8
SwissProt Accessions	Q8CG47, Q8BTS7, Q8BTY9, Q99K21	Gene names	Smc4l1, Capc, Smc4
Domain Architecture
Description	Structural maintenance of chromosomes 4-like 1 protein (Chromosome- associated polypeptide C) (XCAP-C homolog).

CR034_HUMAN
θ value	6.88961 (rank : 13)	NC score	0.014320 (rank : 9)
Query Neighborhood Hits	15	Target Neighborhood Hits	538	Shared Neighborhood Hits	8
SwissProt Accessions	Q5BJE1, Q6ZP67, Q6ZU20	Gene names	C18orf34
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C18orf34.

SMC4_HUMAN
θ value	8.99809 (rank : 14)	NC score	0.014205 (rank : 10)
Query Neighborhood Hits	15	Target Neighborhood Hits	937	Shared Neighborhood Hits	8
SwissProt Accessions	Q9NTJ3, O95752, Q8NDL4, Q9UNT9	Gene names	SMC4L1, CAPC, SMC4
Domain Architecture
Description	Structural maintenance of chromosomes 4-like 1 protein (Chromosome- associated polypeptide C) (hCAP-C) (XCAP-C homolog).

WNT3_MOUSE
θ value	8.99809 (rank : 15)	NC score	0.008800 (rank : 15)
Query Neighborhood Hits	15	Target Neighborhood Hits	45	Shared Neighborhood Hits	3
SwissProt Accessions	P17553	Gene names	Wnt3, Int-4, Wnt-3
Domain Architecture
Description	Proto-oncogene protein Wnt-3 precursor.

Hits sorted by NC score

RO60_MOUSE
NC score	0.999962 (rank : 1)	θ value	0 (rank : 2)
Query Neighborhood Hits	15	Target Neighborhood Hits	15	Shared Neighborhood Hits	15
SwissProt Accessions	O08848, Q9QYD8	Gene names	Trove2, Ssa2
Domain Architecture
Description	60 kDa SS-A/Ro ribonucleoprotein (60 kDa Ro protein) (60 kDa ribonucleoprotein Ro) (RoRNP) (TROVE domain family member 2).

RO60_HUMAN
NC score	0.994077 (rank : 2)	θ value	0 (rank : 1)
Query Neighborhood Hits	15	Target Neighborhood Hits	6	Shared Neighborhood Hits	4
SwissProt Accessions	P10155, Q92787, Q9H1W6	Gene names	TROVE2, RO60, SSA2
Domain Architecture
Description	60 kDa SS-A/Ro ribonucleoprotein (60 kDa Ro protein) (60 kDa ribonucleoprotein Ro) (RoRNP) (Ro 60 kDa autoantigen) (TROVE domain family member 2) (Sjoegren syndrome type A antigen) (SS-A) (Sjoegren syndrome antigen A2).

ENKUR_MOUSE
NC score	0.081715 (rank : 3)	θ value	0.813845 (rank : 4)
Query Neighborhood Hits	15	Target Neighborhood Hits	51	Shared Neighborhood Hits	4
SwissProt Accessions	Q6SP97	Gene names
Domain Architecture	No domain graphic available
Description	Enkurin.

TTC3_HUMAN
NC score	0.070661 (rank : 4)	θ value	0.00509761 (rank : 3)
Query Neighborhood Hits	15	Target Neighborhood Hits	664	Shared Neighborhood Hits	7
SwissProt Accessions	P53804, O60767, P78476, P78477	Gene names	TTC3, TPRD
Domain Architecture
Description	Tetratricopeptide repeat protein 3 (TPR repeat protein 3) (TPR repeat protein D).

ENKUR_HUMAN
NC score	0.069322 (rank : 5)	θ value	1.06291 (rank : 6)
Query Neighborhood Hits	15	Target Neighborhood Hits	64	Shared Neighborhood Hits	3
SwissProt Accessions	Q8TC29	Gene names	C10orf63
Domain Architecture	No domain graphic available
Description	Enkurin.

FLIP1_MOUSE
NC score	0.016521 (rank : 6)	θ value	2.36792 (rank : 8)
Query Neighborhood Hits	15	Target Neighborhood Hits	1176	Shared Neighborhood Hits	8
SwissProt Accessions	Q9CS72	Gene names	Filip1
Domain Architecture	No domain graphic available
Description	Filamin-A-interacting protein 1 (FILIP).

SPTA2_HUMAN
NC score	0.015782 (rank : 7)	θ value	0.813845 (rank : 5)
Query Neighborhood Hits	15	Target Neighborhood Hits	888	Shared Neighborhood Hits	7
SwissProt Accessions	Q13813, Q13186, Q15324, Q16606, Q59EF1, Q5VXV5, Q5VXV6, Q7Z6M5, Q9P0V0	Gene names	SPTAN1, SPTA2
Domain Architecture
Description	Spectrin alpha chain, brain (Spectrin, non-erythroid alpha chain) (Alpha-II spectrin) (Fodrin alpha chain).

SMC4_MOUSE
NC score	0.015234 (rank : 8)	θ value	5.27518 (rank : 12)
Query Neighborhood Hits	15	Target Neighborhood Hits	830	Shared Neighborhood Hits	8
SwissProt Accessions	Q8CG47, Q8BTS7, Q8BTY9, Q99K21	Gene names	Smc4l1, Capc, Smc4
Domain Architecture
Description	Structural maintenance of chromosomes 4-like 1 protein (Chromosome- associated polypeptide C) (XCAP-C homolog).

CR034_HUMAN
NC score	0.014320 (rank : 9)	θ value	6.88961 (rank : 13)
Query Neighborhood Hits	15	Target Neighborhood Hits	538	Shared Neighborhood Hits	8
SwissProt Accessions	Q5BJE1, Q6ZP67, Q6ZU20	Gene names	C18orf34
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C18orf34.

SMC4_HUMAN
NC score	0.014205 (rank : 10)	θ value	8.99809 (rank : 14)
Query Neighborhood Hits	15	Target Neighborhood Hits	937	Shared Neighborhood Hits	8
SwissProt Accessions	Q9NTJ3, O95752, Q8NDL4, Q9UNT9	Gene names	SMC4L1, CAPC, SMC4
Domain Architecture
Description	Structural maintenance of chromosomes 4-like 1 protein (Chromosome- associated polypeptide C) (hCAP-C) (XCAP-C homolog).

FLIP1_HUMAN
NC score	0.014189 (rank : 11)	θ value	5.27518 (rank : 11)
Query Neighborhood Hits	15	Target Neighborhood Hits	1405	Shared Neighborhood Hits	8
SwissProt Accessions	Q7Z7B0, Q5VUL6, Q86TC3, Q8N8B9, Q96SK6, Q9NVI8, Q9ULE5	Gene names	FILIP1, KIAA1275
Domain Architecture	No domain graphic available
Description	Filamin-A-interacting protein 1 (FILIP).

WNT3_HUMAN
NC score	0.013310 (rank : 12)	θ value	4.03905 (rank : 10)
Query Neighborhood Hits	15	Target Neighborhood Hits	46	Shared Neighborhood Hits	4
SwissProt Accessions	P56703, Q9H1J9	Gene names	WNT3, INT4
Domain Architecture
Description	Proto-oncogene protein Wnt-3 precursor.

AMPE_HUMAN
NC score	0.012524 (rank : 13)	θ value	4.03905 (rank : 9)
Query Neighborhood Hits	15	Target Neighborhood Hits	46	Shared Neighborhood Hits	2
SwissProt Accessions	Q07075	Gene names	ENPEP
Domain Architecture
Description	Glutamyl aminopeptidase (EC 3.4.11.7) (EAP) (Aminopeptidase A) (APA) (Differentiation antigen gp160) (CD249 antigen).

STAB2_MOUSE
NC score	0.011934 (rank : 14)	θ value	1.81305 (rank : 7)
Query Neighborhood Hits	15	Target Neighborhood Hits	528	Shared Neighborhood Hits	2
SwissProt Accessions	Q8R4U0, Q8BM87	Gene names	Stab2
Domain Architecture	No domain graphic available
Description	Stabilin-2 precursor [Contains: Short form stabilin-2].

WNT3_MOUSE
NC score	0.008800 (rank : 15)	θ value	8.99809 (rank : 15)
Query Neighborhood Hits	15	Target Neighborhood Hits	45	Shared Neighborhood Hits	3
SwissProt Accessions	P17553	Gene names	Wnt3, Int-4, Wnt-3
Domain Architecture
Description	Proto-oncogene protein Wnt-3 precursor.