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Network neighborhood for query Sequence : LSM8_HUMAN

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LSM8_HUMAN
SwissProt Accessions	O95777	Gene names	LSM8
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm8.
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

LSM8_HUMAN
θ value	2.18568e-46 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	16	Target Neighborhood Hits	16	Shared Neighborhood Hits	16
SwissProt Accessions	O95777	Gene names	LSM8
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm8.

LSM8_MOUSE
θ value	2.18568e-46 (rank : 2)	NC score	0.999962 (rank : 2)
Query Neighborhood Hits	16	Target Neighborhood Hits	16	Shared Neighborhood Hits	16
SwissProt Accessions	Q6ZWM4, Q3TIX3	Gene names	Lsm8
Domain Architecture	No domain graphic available
Description	U6 snRNA-associated Sm-like protein LSm8.

LSM1_HUMAN
θ value	3.08544e-08 (rank : 3)	NC score	0.636311 (rank : 4)
Query Neighborhood Hits	16	Target Neighborhood Hits	17	Shared Neighborhood Hits	12
SwissProt Accessions	O15116	Gene names	LSM1, CASM
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm1 (Small nuclear ribonuclear CaSm) (Cancer-associated Sm-like).

LSM1_MOUSE
θ value	3.08544e-08 (rank : 4)	NC score	0.636330 (rank : 3)
Query Neighborhood Hits	16	Target Neighborhood Hits	15	Shared Neighborhood Hits	12
SwissProt Accessions	Q8VC85	Gene names	Lsm1
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm1.

RSMB_HUMAN
θ value	0.000786445 (rank : 5)	NC score	0.405762 (rank : 12)
Query Neighborhood Hits	16	Target Neighborhood Hits	117	Shared Neighborhood Hits	16
SwissProt Accessions	P14678, Q15490, Q9UIS5	Gene names	SNRPB, COD, SNRPB1
Domain Architecture
Description	Small nuclear ribonucleoprotein-associated proteins B and B' (snRNP-B) (Sm protein B/B') (Sm-B/Sm-B') (SmB/SmB').

RSMB_MOUSE
θ value	0.000786445 (rank : 6)	NC score	0.412784 (rank : 9)
Query Neighborhood Hits	16	Target Neighborhood Hits	93	Shared Neighborhood Hits	16
SwissProt Accessions	P27048, Q3UJT1	Gene names	Snrpb
Domain Architecture
Description	Small nuclear ribonucleoprotein-associated protein B (snRNP-B) (Sm protein B) (Sm-B) (SmB).

LSM7_MOUSE
θ value	0.00134147 (rank : 7)	NC score	0.457869 (rank : 8)
Query Neighborhood Hits	16	Target Neighborhood Hits	16	Shared Neighborhood Hits	16
SwissProt Accessions	Q9CQQ8	Gene names	Lsm7
Domain Architecture	No domain graphic available
Description	U6 snRNA-associated Sm-like protein LSm7.

RSMN_HUMAN
θ value	0.00134147 (rank : 8)	NC score	0.412097 (rank : 10)
Query Neighborhood Hits	16	Target Neighborhood Hits	110	Shared Neighborhood Hits	16
SwissProt Accessions	P63162, P14648, P17135	Gene names	SNRPN, HCERN3, SMN
Domain Architecture	No domain graphic available
Description	Small nuclear ribonucleoprotein-associated protein N (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D) (Tissue-specific-splicing protein).

RSMN_MOUSE
θ value	0.00134147 (rank : 9)	NC score	0.412097 (rank : 11)
Query Neighborhood Hits	16	Target Neighborhood Hits	110	Shared Neighborhood Hits	16
SwissProt Accessions	P63163, P14648, P17135	Gene names	Snrpn, Smn
Domain Architecture	No domain graphic available
Description	Small nuclear ribonucleoprotein-associated protein N (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D) (Tissue-specific-splicing protein).

LSM7_HUMAN
θ value	0.00175202 (rank : 10)	NC score	0.458553 (rank : 7)
Query Neighborhood Hits	16	Target Neighborhood Hits	16	Shared Neighborhood Hits	16
SwissProt Accessions	Q9UK45	Gene names	LSM7
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm7.

RUXG_HUMAN
θ value	0.00228821 (rank : 11)	NC score	0.496764 (rank : 5)
Query Neighborhood Hits	16	Target Neighborhood Hits	18	Shared Neighborhood Hits	16
SwissProt Accessions	P62308, Q15357	Gene names	SNRPG, PBSCG
Domain Architecture
Description	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG).

RUXG_MOUSE
θ value	0.00228821 (rank : 12)	NC score	0.496764 (rank : 6)
Query Neighborhood Hits	16	Target Neighborhood Hits	18	Shared Neighborhood Hits	16
SwissProt Accessions	P62309, Q15357, Q52KC7	Gene names	Snrpg
Domain Architecture
Description	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG).

RUXE_HUMAN
θ value	0.279714 (rank : 13)	NC score	0.283660 (rank : 13)
Query Neighborhood Hits	16	Target Neighborhood Hits	14	Shared Neighborhood Hits	14
SwissProt Accessions	P62304, P08578, Q15498	Gene names	SNRPE
Domain Architecture
Description	Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE).

RUXE_MOUSE
θ value	0.279714 (rank : 14)	NC score	0.283660 (rank : 14)
Query Neighborhood Hits	16	Target Neighborhood Hits	14	Shared Neighborhood Hits	14
SwissProt Accessions	P62305, P08578, Q15498	Gene names	Snrpe
Domain Architecture
Description	Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE).

LSM5_HUMAN
θ value	1.06291 (rank : 15)	NC score	0.224405 (rank : 15)
Query Neighborhood Hits	16	Target Neighborhood Hits	20	Shared Neighborhood Hits	14
SwissProt Accessions	Q9Y4Y9	Gene names	LSM5
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm5.

LSM5_MOUSE
θ value	1.06291 (rank : 16)	NC score	0.224405 (rank : 16)
Query Neighborhood Hits	16	Target Neighborhood Hits	20	Shared Neighborhood Hits	14
SwissProt Accessions	P62322	Gene names	Lsm5
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm5.

Hits sorted by NC score

LSM8_HUMAN
NC score	0.999962 (rank : 1)	θ value	2.18568e-46 (rank : 1)
Query Neighborhood Hits	16	Target Neighborhood Hits	16	Shared Neighborhood Hits	16
SwissProt Accessions	O95777	Gene names	LSM8
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm8.

LSM8_MOUSE
NC score	0.999962 (rank : 2)	θ value	2.18568e-46 (rank : 2)
Query Neighborhood Hits	16	Target Neighborhood Hits	16	Shared Neighborhood Hits	16
SwissProt Accessions	Q6ZWM4, Q3TIX3	Gene names	Lsm8
Domain Architecture	No domain graphic available
Description	U6 snRNA-associated Sm-like protein LSm8.

LSM1_MOUSE
NC score	0.636330 (rank : 3)	θ value	3.08544e-08 (rank : 4)
Query Neighborhood Hits	16	Target Neighborhood Hits	15	Shared Neighborhood Hits	12
SwissProt Accessions	Q8VC85	Gene names	Lsm1
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm1.

LSM1_HUMAN
NC score	0.636311 (rank : 4)	θ value	3.08544e-08 (rank : 3)
Query Neighborhood Hits	16	Target Neighborhood Hits	17	Shared Neighborhood Hits	12
SwissProt Accessions	O15116	Gene names	LSM1, CASM
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm1 (Small nuclear ribonuclear CaSm) (Cancer-associated Sm-like).

RUXG_HUMAN
NC score	0.496764 (rank : 5)	θ value	0.00228821 (rank : 11)
Query Neighborhood Hits	16	Target Neighborhood Hits	18	Shared Neighborhood Hits	16
SwissProt Accessions	P62308, Q15357	Gene names	SNRPG, PBSCG
Domain Architecture
Description	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG).

RUXG_MOUSE
NC score	0.496764 (rank : 6)	θ value	0.00228821 (rank : 12)
Query Neighborhood Hits	16	Target Neighborhood Hits	18	Shared Neighborhood Hits	16
SwissProt Accessions	P62309, Q15357, Q52KC7	Gene names	Snrpg
Domain Architecture
Description	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG).

LSM7_HUMAN
NC score	0.458553 (rank : 7)	θ value	0.00175202 (rank : 10)
Query Neighborhood Hits	16	Target Neighborhood Hits	16	Shared Neighborhood Hits	16
SwissProt Accessions	Q9UK45	Gene names	LSM7
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm7.

LSM7_MOUSE
NC score	0.457869 (rank : 8)	θ value	0.00134147 (rank : 7)
Query Neighborhood Hits	16	Target Neighborhood Hits	16	Shared Neighborhood Hits	16
SwissProt Accessions	Q9CQQ8	Gene names	Lsm7
Domain Architecture	No domain graphic available
Description	U6 snRNA-associated Sm-like protein LSm7.

RSMB_MOUSE
NC score	0.412784 (rank : 9)	θ value	0.000786445 (rank : 6)
Query Neighborhood Hits	16	Target Neighborhood Hits	93	Shared Neighborhood Hits	16
SwissProt Accessions	P27048, Q3UJT1	Gene names	Snrpb
Domain Architecture
Description	Small nuclear ribonucleoprotein-associated protein B (snRNP-B) (Sm protein B) (Sm-B) (SmB).

RSMN_HUMAN
NC score	0.412097 (rank : 10)	θ value	0.00134147 (rank : 8)
Query Neighborhood Hits	16	Target Neighborhood Hits	110	Shared Neighborhood Hits	16
SwissProt Accessions	P63162, P14648, P17135	Gene names	SNRPN, HCERN3, SMN
Domain Architecture	No domain graphic available
Description	Small nuclear ribonucleoprotein-associated protein N (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D) (Tissue-specific-splicing protein).

RSMN_MOUSE
NC score	0.412097 (rank : 11)	θ value	0.00134147 (rank : 9)
Query Neighborhood Hits	16	Target Neighborhood Hits	110	Shared Neighborhood Hits	16
SwissProt Accessions	P63163, P14648, P17135	Gene names	Snrpn, Smn
Domain Architecture	No domain graphic available
Description	Small nuclear ribonucleoprotein-associated protein N (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D) (Tissue-specific-splicing protein).

RSMB_HUMAN
NC score	0.405762 (rank : 12)	θ value	0.000786445 (rank : 5)
Query Neighborhood Hits	16	Target Neighborhood Hits	117	Shared Neighborhood Hits	16
SwissProt Accessions	P14678, Q15490, Q9UIS5	Gene names	SNRPB, COD, SNRPB1
Domain Architecture
Description	Small nuclear ribonucleoprotein-associated proteins B and B' (snRNP-B) (Sm protein B/B') (Sm-B/Sm-B') (SmB/SmB').

RUXE_HUMAN
NC score	0.283660 (rank : 13)	θ value	0.279714 (rank : 13)
Query Neighborhood Hits	16	Target Neighborhood Hits	14	Shared Neighborhood Hits	14
SwissProt Accessions	P62304, P08578, Q15498	Gene names	SNRPE
Domain Architecture
Description	Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE).

RUXE_MOUSE
NC score	0.283660 (rank : 14)	θ value	0.279714 (rank : 14)
Query Neighborhood Hits	16	Target Neighborhood Hits	14	Shared Neighborhood Hits	14
SwissProt Accessions	P62305, P08578, Q15498	Gene names	Snrpe
Domain Architecture
Description	Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE).

LSM5_HUMAN
NC score	0.224405 (rank : 15)	θ value	1.06291 (rank : 15)
Query Neighborhood Hits	16	Target Neighborhood Hits	20	Shared Neighborhood Hits	14
SwissProt Accessions	Q9Y4Y9	Gene names	LSM5
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm5.

LSM5_MOUSE
NC score	0.224405 (rank : 16)	θ value	1.06291 (rank : 16)
Query Neighborhood Hits	16	Target Neighborhood Hits	20	Shared Neighborhood Hits	14
SwissProt Accessions	P62322	Gene names	Lsm5
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm5.