LSM1_HUMAN
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SwissProt Accessions | O15116 | Gene names | LSM1, CASM | |||
Domain Architecture |
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Description | U6 snRNA-associated Sm-like protein LSm1 (Small nuclear ribonuclear CaSm) (Cancer-associated Sm-like). | |||||
Rank Plots |
Jump to hits sorted by NC score
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LSM1_HUMAN
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θ value | 4.09345e-69 (rank : 1) | NC score | 0.999962 (rank : 1) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 17 | Shared Neighborhood Hits | 17 | |
SwissProt Accessions | O15116 | Gene names | LSM1, CASM | |||
Domain Architecture |
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Description | U6 snRNA-associated Sm-like protein LSm1 (Small nuclear ribonuclear CaSm) (Cancer-associated Sm-like). |
LSM1_MOUSE
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θ value | 5.91091e-68 (rank : 2) | NC score | 0.998753 (rank : 2) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 15 | Shared Neighborhood Hits | 14 | |
SwissProt Accessions | Q8VC85 | Gene names | Lsm1 | |||
Domain Architecture |
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Description | U6 snRNA-associated Sm-like protein LSm1. |
LSM8_HUMAN
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θ value | 3.08544e-08 (rank : 3) | NC score | 0.636311 (rank : 3) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 16 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | O95777 | Gene names | LSM8 | |||
Domain Architecture |
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Description | U6 snRNA-associated Sm-like protein LSm8. |
LSM8_MOUSE
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θ value | 3.08544e-08 (rank : 4) | NC score | 0.636311 (rank : 4) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 16 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | Q6ZWM4, Q3TIX3 | Gene names | Lsm8 | |||
Domain Architecture |
No domain graphic available |
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Description | U6 snRNA-associated Sm-like protein LSm8. |
RUXG_HUMAN
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θ value | 0.00665767 (rank : 5) | NC score | 0.378182 (rank : 5) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 18 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | P62308, Q15357 | Gene names | SNRPG, PBSCG | |||
Domain Architecture |
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Description | Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG). |
RUXG_MOUSE
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θ value | 0.00665767 (rank : 6) | NC score | 0.378182 (rank : 6) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 18 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | P62309, Q15357, Q52KC7 | Gene names | Snrpg | |||
Domain Architecture |
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Description | Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG). |
RSMN_HUMAN
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θ value | 0.0563607 (rank : 7) | NC score | 0.249173 (rank : 7) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 110 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | P63162, P14648, P17135 | Gene names | SNRPN, HCERN3, SMN | |||
Domain Architecture |
No domain graphic available |
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Description | Small nuclear ribonucleoprotein-associated protein N (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D) (Tissue-specific-splicing protein). |
RSMN_MOUSE
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θ value | 0.0563607 (rank : 8) | NC score | 0.249173 (rank : 8) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 110 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | P63163, P14648, P17135 | Gene names | Snrpn, Smn | |||
Domain Architecture |
No domain graphic available |
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Description | Small nuclear ribonucleoprotein-associated protein N (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D) (Tissue-specific-splicing protein). |
RSMB_HUMAN
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θ value | 0.47712 (rank : 9) | NC score | 0.225459 (rank : 10) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 117 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | P14678, Q15490, Q9UIS5 | Gene names | SNRPB, COD, SNRPB1 | |||
Domain Architecture |
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Description | Small nuclear ribonucleoprotein-associated proteins B and B' (snRNP-B) (Sm protein B/B') (Sm-B/Sm-B') (SmB/SmB'). |
RSMB_MOUSE
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θ value | 0.47712 (rank : 10) | NC score | 0.229384 (rank : 9) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 93 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | P27048, Q3UJT1 | Gene names | Snrpb | |||
Domain Architecture |
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Description | Small nuclear ribonucleoprotein-associated protein B (snRNP-B) (Sm protein B) (Sm-B) (SmB). |
ZN452_HUMAN
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θ value | 0.62314 (rank : 11) | NC score | 0.038498 (rank : 17) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 139 | Shared Neighborhood Hits | 4 | |
SwissProt Accessions | Q6R2W3, Q2NKL9, Q5SRJ3, Q8TCN2, Q96PW3 | Gene names | ZNF452, KIAA1925 | |||
Domain Architecture |
No domain graphic available |
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Description | Protein ZNF452. |
LSM7_HUMAN
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θ value | 3.0926 (rank : 12) | NC score | 0.207376 (rank : 11) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 16 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | Q9UK45 | Gene names | LSM7 | |||
Domain Architecture |
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Description | U6 snRNA-associated Sm-like protein LSm7. |
LSM7_MOUSE
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θ value | 5.27518 (rank : 13) | NC score | 0.197401 (rank : 12) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 16 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | Q9CQQ8 | Gene names | Lsm7 | |||
Domain Architecture |
No domain graphic available |
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Description | U6 snRNA-associated Sm-like protein LSm7. |
NP1L1_HUMAN
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θ value | 5.27518 (rank : 14) | NC score | 0.024718 (rank : 18) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 54 | Shared Neighborhood Hits | 3 | |
SwissProt Accessions | P55209 | Gene names | NAP1L1, NRP | |||
Domain Architecture |
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Description | Nucleosome assembly protein 1-like 1 (NAP-1-related protein) (hNRP). |
NOC3L_HUMAN
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θ value | 6.88961 (rank : 15) | NC score | 0.020629 (rank : 20) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 135 | Shared Neighborhood Hits | 2 | |
SwissProt Accessions | Q8WTT2, Q9H5M6, Q9H9D8 | Gene names | NOC3L, AD24, C10orf117, FAD24 | |||
Domain Architecture |
No domain graphic available |
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Description | Nucleolar complex protein 3 homolog (NOC3 protein homolog) (NOC3-like protein) (Nucleolar complex-associated protein 3-like protein) (Factor for adipocyte differentiation 24). |
NP1L1_MOUSE
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θ value | 6.88961 (rank : 16) | NC score | 0.023487 (rank : 19) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 52 | Shared Neighborhood Hits | 3 | |
SwissProt Accessions | P28656, Q3UL14 | Gene names | Nap1l1, Nrp | |||
Domain Architecture |
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Description | Nucleosome assembly protein 1-like 1 (NAP-1-related protein) (Brain protein DN38). |
ZNF96_HUMAN
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θ value | 6.88961 (rank : 17) | NC score | 0.003888 (rank : 21) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 869 | Shared Neighborhood Hits | 4 | |
SwissProt Accessions | O43309, O43724 | Gene names | ZNF96, KIAA0426, ZNF305, ZSCAN12 | |||
Domain Architecture |
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Description | Zinc finger protein 96 (Zinc finger protein 305) (Zinc finger and SCAN domain-containing protein 12). |
LSM5_HUMAN
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θ value | θ > 10 (rank : 18) | NC score | 0.062106 (rank : 15) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 20 | Shared Neighborhood Hits | 10 | |
SwissProt Accessions | Q9Y4Y9 | Gene names | LSM5 | |||
Domain Architecture |
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Description | U6 snRNA-associated Sm-like protein LSm5. |
LSM5_MOUSE
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θ value | θ > 10 (rank : 19) | NC score | 0.062106 (rank : 16) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 20 | Shared Neighborhood Hits | 10 | |
SwissProt Accessions | P62322 | Gene names | Lsm5 | |||
Domain Architecture |
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Description | U6 snRNA-associated Sm-like protein LSm5. |
RUXE_HUMAN
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θ value | θ > 10 (rank : 20) | NC score | 0.077841 (rank : 13) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 14 | Shared Neighborhood Hits | 10 | |
SwissProt Accessions | P62304, P08578, Q15498 | Gene names | SNRPE | |||
Domain Architecture |
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Description | Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE). |
RUXE_MOUSE
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θ value | θ > 10 (rank : 21) | NC score | 0.077841 (rank : 14) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 14 | Shared Neighborhood Hits | 10 | |
SwissProt Accessions | P62305, P08578, Q15498 | Gene names | Snrpe | |||
Domain Architecture |
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Description | Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE). |
LSM1_HUMAN
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NC score | 0.999962 (rank : 1) | θ value | 4.09345e-69 (rank : 1) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 17 | Shared Neighborhood Hits | 17 | |
SwissProt Accessions | O15116 | Gene names | LSM1, CASM | |||
Domain Architecture |
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Description | U6 snRNA-associated Sm-like protein LSm1 (Small nuclear ribonuclear CaSm) (Cancer-associated Sm-like). |
LSM1_MOUSE
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NC score | 0.998753 (rank : 2) | θ value | 5.91091e-68 (rank : 2) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 15 | Shared Neighborhood Hits | 14 | |
SwissProt Accessions | Q8VC85 | Gene names | Lsm1 | |||
Domain Architecture |
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Description | U6 snRNA-associated Sm-like protein LSm1. |
LSM8_HUMAN
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NC score | 0.636311 (rank : 3) | θ value | 3.08544e-08 (rank : 3) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 16 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | O95777 | Gene names | LSM8 | |||
Domain Architecture |
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Description | U6 snRNA-associated Sm-like protein LSm8. |
LSM8_MOUSE
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NC score | 0.636311 (rank : 4) | θ value | 3.08544e-08 (rank : 4) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 16 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | Q6ZWM4, Q3TIX3 | Gene names | Lsm8 | |||
Domain Architecture |
No domain graphic available |
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Description | U6 snRNA-associated Sm-like protein LSm8. |
RUXG_HUMAN
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NC score | 0.378182 (rank : 5) | θ value | 0.00665767 (rank : 5) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 18 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | P62308, Q15357 | Gene names | SNRPG, PBSCG | |||
Domain Architecture |
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Description | Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG). |
RUXG_MOUSE
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NC score | 0.378182 (rank : 6) | θ value | 0.00665767 (rank : 6) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 18 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | P62309, Q15357, Q52KC7 | Gene names | Snrpg | |||
Domain Architecture |
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Description | Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG). |
RSMN_HUMAN
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NC score | 0.249173 (rank : 7) | θ value | 0.0563607 (rank : 7) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 110 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | P63162, P14648, P17135 | Gene names | SNRPN, HCERN3, SMN | |||
Domain Architecture |
No domain graphic available |
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Description | Small nuclear ribonucleoprotein-associated protein N (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D) (Tissue-specific-splicing protein). |
RSMN_MOUSE
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NC score | 0.249173 (rank : 8) | θ value | 0.0563607 (rank : 8) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 110 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | P63163, P14648, P17135 | Gene names | Snrpn, Smn | |||
Domain Architecture |
No domain graphic available |
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Description | Small nuclear ribonucleoprotein-associated protein N (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D) (Tissue-specific-splicing protein). |
RSMB_MOUSE
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NC score | 0.229384 (rank : 9) | θ value | 0.47712 (rank : 10) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 93 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | P27048, Q3UJT1 | Gene names | Snrpb | |||
Domain Architecture |
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Description | Small nuclear ribonucleoprotein-associated protein B (snRNP-B) (Sm protein B) (Sm-B) (SmB). |
RSMB_HUMAN
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NC score | 0.225459 (rank : 10) | θ value | 0.47712 (rank : 9) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 117 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | P14678, Q15490, Q9UIS5 | Gene names | SNRPB, COD, SNRPB1 | |||
Domain Architecture |
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Description | Small nuclear ribonucleoprotein-associated proteins B and B' (snRNP-B) (Sm protein B/B') (Sm-B/Sm-B') (SmB/SmB'). |
LSM7_HUMAN
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NC score | 0.207376 (rank : 11) | θ value | 3.0926 (rank : 12) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 16 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | Q9UK45 | Gene names | LSM7 | |||
Domain Architecture |
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Description | U6 snRNA-associated Sm-like protein LSm7. |
LSM7_MOUSE
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NC score | 0.197401 (rank : 12) | θ value | 5.27518 (rank : 13) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 16 | Shared Neighborhood Hits | 12 | |
SwissProt Accessions | Q9CQQ8 | Gene names | Lsm7 | |||
Domain Architecture |
No domain graphic available |
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Description | U6 snRNA-associated Sm-like protein LSm7. |
RUXE_HUMAN
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NC score | 0.077841 (rank : 13) | θ value | θ > 10 (rank : 20) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 14 | Shared Neighborhood Hits | 10 | |
SwissProt Accessions | P62304, P08578, Q15498 | Gene names | SNRPE | |||
Domain Architecture |
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Description | Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE). |
RUXE_MOUSE
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NC score | 0.077841 (rank : 14) | θ value | θ > 10 (rank : 21) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 14 | Shared Neighborhood Hits | 10 | |
SwissProt Accessions | P62305, P08578, Q15498 | Gene names | Snrpe | |||
Domain Architecture |
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Description | Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE). |
LSM5_HUMAN
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NC score | 0.062106 (rank : 15) | θ value | θ > 10 (rank : 18) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 20 | Shared Neighborhood Hits | 10 | |
SwissProt Accessions | Q9Y4Y9 | Gene names | LSM5 | |||
Domain Architecture |
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Description | U6 snRNA-associated Sm-like protein LSm5. |
LSM5_MOUSE
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NC score | 0.062106 (rank : 16) | θ value | θ > 10 (rank : 19) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 20 | Shared Neighborhood Hits | 10 | |
SwissProt Accessions | P62322 | Gene names | Lsm5 | |||
Domain Architecture |
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Description | U6 snRNA-associated Sm-like protein LSm5. |
ZN452_HUMAN
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NC score | 0.038498 (rank : 17) | θ value | 0.62314 (rank : 11) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 139 | Shared Neighborhood Hits | 4 | |
SwissProt Accessions | Q6R2W3, Q2NKL9, Q5SRJ3, Q8TCN2, Q96PW3 | Gene names | ZNF452, KIAA1925 | |||
Domain Architecture |
No domain graphic available |
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Description | Protein ZNF452. |
NP1L1_HUMAN
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NC score | 0.024718 (rank : 18) | θ value | 5.27518 (rank : 14) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 54 | Shared Neighborhood Hits | 3 | |
SwissProt Accessions | P55209 | Gene names | NAP1L1, NRP | |||
Domain Architecture |
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Description | Nucleosome assembly protein 1-like 1 (NAP-1-related protein) (hNRP). |
NP1L1_MOUSE
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NC score | 0.023487 (rank : 19) | θ value | 6.88961 (rank : 16) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 52 | Shared Neighborhood Hits | 3 | |
SwissProt Accessions | P28656, Q3UL14 | Gene names | Nap1l1, Nrp | |||
Domain Architecture |
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Description | Nucleosome assembly protein 1-like 1 (NAP-1-related protein) (Brain protein DN38). |
NOC3L_HUMAN
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NC score | 0.020629 (rank : 20) | θ value | 6.88961 (rank : 15) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 135 | Shared Neighborhood Hits | 2 | |
SwissProt Accessions | Q8WTT2, Q9H5M6, Q9H9D8 | Gene names | NOC3L, AD24, C10orf117, FAD24 | |||
Domain Architecture |
No domain graphic available |
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Description | Nucleolar complex protein 3 homolog (NOC3 protein homolog) (NOC3-like protein) (Nucleolar complex-associated protein 3-like protein) (Factor for adipocyte differentiation 24). |
ZNF96_HUMAN
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NC score | 0.003888 (rank : 21) | θ value | 6.88961 (rank : 17) | |||
Query Neighborhood Hits | 17 | Target Neighborhood Hits | 869 | Shared Neighborhood Hits | 4 | |
SwissProt Accessions | O43309, O43724 | Gene names | ZNF96, KIAA0426, ZNF305, ZSCAN12 | |||
Domain Architecture |
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Description | Zinc finger protein 96 (Zinc finger protein 305) (Zinc finger and SCAN domain-containing protein 12). |