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Network neighborhood for query Sequence : ABEC4_HUMAN

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ABEC4_HUMAN
 
SwissProt Accessions Q8WW27, Q8N7F6 Gene names APOBEC4, C1orf169
Domain
Architecture

No domain graphic available

Description Putative C->U-editing enzyme APOBEC-4 (EC 3.5.4.-) (Apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 4).
Rank Plots



Hits sorted by θ


ABEC4_HUMAN
 
θ value 0 (rank : 1) NC score 0.999962 (rank : 1)
Query Neighborhood Hits 11 Target Neighborhood Hits 11 Shared Neighborhood Hits 11
SwissProt Accessions Q8WW27, Q8N7F6 Gene names APOBEC4, C1orf169
Domain
Architecture

No domain graphic available

Description Putative C->U-editing enzyme APOBEC-4 (EC 3.5.4.-) (Apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 4).
ABEC4_MOUSE
 
θ value 1.16911e-132 (rank : 2) NC score 0.982628 (rank : 2)
Query Neighborhood Hits 11 Target Neighborhood Hits 14 Shared Neighborhood Hits 6
SwissProt Accessions Q497M3 Gene names Apobec4
Domain
Architecture

No domain graphic available

Description Putative C->U-editing enzyme APOBEC-4 (EC 3.5.4.-) (Apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 4).
S23IP_MOUSE
 
θ value 0.0563607 (rank : 3) NC score 0.068137 (rank : 5)
Query Neighborhood Hits 11 Target Neighborhood Hits 363 Shared Neighborhood Hits 3
SwissProt Accessions Q6NZC7, Q8BXY6 Gene names Sec23ip
Domain
Architecture

No domain graphic available

Description SEC23-interacting protein.
ABEC1_MOUSE
 
θ value 0.47712 (rank : 4) NC score 0.117363 (rank : 3)
Query Neighborhood Hits 11 Target Neighborhood Hits 15 Shared Neighborhood Hits 7
SwissProt Accessions P51908, Q99L67 Gene names Apobec1
Domain
Architecture
Description C->U-editing enzyme APOBEC-1 (EC 3.5.4.-) (Apolipoprotein B mRNA- editing enzyme 1).
SC24C_HUMAN
 
θ value 1.81305 (rank : 5) NC score 0.026598 (rank : 9)
Query Neighborhood Hits 11 Target Neighborhood Hits 662 Shared Neighborhood Hits 4
SwissProt Accessions P53992, Q8WV25 Gene names SEC24C, KIAA0079
Domain
Architecture
Description Protein transport protein Sec24C (SEC24-related protein C).
ABC3B_HUMAN
 
θ value 2.36792 (rank : 6) NC score 0.062406 (rank : 7)
Query Neighborhood Hits 11 Target Neighborhood Hits 16 Shared Neighborhood Hits 7
SwissProt Accessions Q9UH17, O95618, Q5IFJ4, Q7Z2N3, Q7Z6D6, Q9UE74 Gene names APOBEC3B
Domain
Architecture
Description Probable DNA dC->dU-editing enzyme APOBEC-3B (EC 3.5.4.-) (Phorbolin- 1-related protein) (Phorbolin-2/3).
ABC3F_HUMAN
 
θ value 2.36792 (rank : 7) NC score 0.058678 (rank : 8)
Query Neighborhood Hits 11 Target Neighborhood Hits 16 Shared Neighborhood Hits 7
SwissProt Accessions Q8IUX4, Q45F03, Q7Z2N2, Q7Z2N5 Gene names APOBEC3F
Domain
Architecture
Description DNA dC->dU-editing enzyme APOBEC-3F (EC 3.5.4.-) (Apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 3F).
ABC3G_HUMAN
 
θ value 2.36792 (rank : 8) NC score 0.068081 (rank : 6)
Query Neighborhood Hits 11 Target Neighborhood Hits 16 Shared Neighborhood Hits 7
SwissProt Accessions Q9HC16, Q45F02, Q5TF77, Q7Z2N1, Q7Z2N4, Q9H9H8 Gene names APOBEC3G
Domain
Architecture
Description DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.-) (APOBEC-related cytidine deaminase) (ARCD) (APOBEC-related protein) (ARP-9) (CEM15) (CEM-15).
ABEC1_HUMAN
 
θ value 3.0926 (rank : 9) NC score 0.068772 (rank : 4)
Query Neighborhood Hits 11 Target Neighborhood Hits 15 Shared Neighborhood Hits 6
SwissProt Accessions P41238, Q9UE64, Q9UM71 Gene names APOBEC1
Domain
Architecture
Description C->U-editing enzyme APOBEC-1 (EC 3.5.4.-) (Apolipoprotein B mRNA- editing enzyme 1) (HEPR).
TM1L1_HUMAN
 
θ value 3.0926 (rank : 10) NC score 0.024806 (rank : 10)
Query Neighborhood Hits 11 Target Neighborhood Hits 52 Shared Neighborhood Hits 2
SwissProt Accessions O75674 Gene names TOM1L1, SRCASM
Domain
Architecture
Description TOM1-like 1 protein (Target of myb-like 1 protein) (Src-activating and signaling molecule protein).
AMELX_MOUSE
 
θ value 6.88961 (rank : 11) NC score 0.023584 (rank : 11)
Query Neighborhood Hits 11 Target Neighborhood Hits 58 Shared Neighborhood Hits 3
SwissProt Accessions P63277, P45559, P70592, Q61293 Gene names Amelx, Amel
Domain
Architecture

No domain graphic available

Description Amelogenin, X isoform precursor (Leucine-rich amelogenin peptide) (LRAP).

Hits sorted by NC score


ABEC4_HUMAN
 
NC score 0.999962 (rank : 1) θ value 0 (rank : 1)
Query Neighborhood Hits 11 Target Neighborhood Hits 11 Shared Neighborhood Hits 11
SwissProt Accessions Q8WW27, Q8N7F6 Gene names APOBEC4, C1orf169
Domain
Architecture

No domain graphic available

Description Putative C->U-editing enzyme APOBEC-4 (EC 3.5.4.-) (Apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 4).
ABEC4_MOUSE
 
NC score 0.982628 (rank : 2) θ value 1.16911e-132 (rank : 2)
Query Neighborhood Hits 11 Target Neighborhood Hits 14 Shared Neighborhood Hits 6
SwissProt Accessions Q497M3 Gene names Apobec4
Domain
Architecture

No domain graphic available

Description Putative C->U-editing enzyme APOBEC-4 (EC 3.5.4.-) (Apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 4).
ABEC1_MOUSE
 
NC score 0.117363 (rank : 3) θ value 0.47712 (rank : 4)
Query Neighborhood Hits 11 Target Neighborhood Hits 15 Shared Neighborhood Hits 7
SwissProt Accessions P51908, Q99L67 Gene names Apobec1
Domain
Architecture
Description C->U-editing enzyme APOBEC-1 (EC 3.5.4.-) (Apolipoprotein B mRNA- editing enzyme 1).
ABEC1_HUMAN
 
NC score 0.068772 (rank : 4) θ value 3.0926 (rank : 9)
Query Neighborhood Hits 11 Target Neighborhood Hits 15 Shared Neighborhood Hits 6
SwissProt Accessions P41238, Q9UE64, Q9UM71 Gene names APOBEC1
Domain
Architecture
Description C->U-editing enzyme APOBEC-1 (EC 3.5.4.-) (Apolipoprotein B mRNA- editing enzyme 1) (HEPR).
S23IP_MOUSE
 
NC score 0.068137 (rank : 5) θ value 0.0563607 (rank : 3)
Query Neighborhood Hits 11 Target Neighborhood Hits 363 Shared Neighborhood Hits 3
SwissProt Accessions Q6NZC7, Q8BXY6 Gene names Sec23ip
Domain
Architecture

No domain graphic available

Description SEC23-interacting protein.
ABC3G_HUMAN
 
NC score 0.068081 (rank : 6) θ value 2.36792 (rank : 8)
Query Neighborhood Hits 11 Target Neighborhood Hits 16 Shared Neighborhood Hits 7
SwissProt Accessions Q9HC16, Q45F02, Q5TF77, Q7Z2N1, Q7Z2N4, Q9H9H8 Gene names APOBEC3G
Domain
Architecture
Description DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.-) (APOBEC-related cytidine deaminase) (ARCD) (APOBEC-related protein) (ARP-9) (CEM15) (CEM-15).
ABC3B_HUMAN
 
NC score 0.062406 (rank : 7) θ value 2.36792 (rank : 6)
Query Neighborhood Hits 11 Target Neighborhood Hits 16 Shared Neighborhood Hits 7
SwissProt Accessions Q9UH17, O95618, Q5IFJ4, Q7Z2N3, Q7Z6D6, Q9UE74 Gene names APOBEC3B
Domain
Architecture
Description Probable DNA dC->dU-editing enzyme APOBEC-3B (EC 3.5.4.-) (Phorbolin- 1-related protein) (Phorbolin-2/3).
ABC3F_HUMAN
 
NC score 0.058678 (rank : 8) θ value 2.36792 (rank : 7)
Query Neighborhood Hits 11 Target Neighborhood Hits 16 Shared Neighborhood Hits 7
SwissProt Accessions Q8IUX4, Q45F03, Q7Z2N2, Q7Z2N5 Gene names APOBEC3F
Domain
Architecture
Description DNA dC->dU-editing enzyme APOBEC-3F (EC 3.5.4.-) (Apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 3F).
SC24C_HUMAN
 
NC score 0.026598 (rank : 9) θ value 1.81305 (rank : 5)
Query Neighborhood Hits 11 Target Neighborhood Hits 662 Shared Neighborhood Hits 4
SwissProt Accessions P53992, Q8WV25 Gene names SEC24C, KIAA0079
Domain
Architecture
Description Protein transport protein Sec24C (SEC24-related protein C).
TM1L1_HUMAN
 
NC score 0.024806 (rank : 10) θ value 3.0926 (rank : 10)
Query Neighborhood Hits 11 Target Neighborhood Hits 52 Shared Neighborhood Hits 2
SwissProt Accessions O75674 Gene names TOM1L1, SRCASM
Domain
Architecture
Description TOM1-like 1 protein (Target of myb-like 1 protein) (Src-activating and signaling molecule protein).
AMELX_MOUSE
 
NC score 0.023584 (rank : 11) θ value 6.88961 (rank : 11)
Query Neighborhood Hits 11 Target Neighborhood Hits 58 Shared Neighborhood Hits 3
SwissProt Accessions P63277, P45559, P70592, Q61293 Gene names Amelx, Amel
Domain
Architecture

No domain graphic available

Description Amelogenin, X isoform precursor (Leucine-rich amelogenin peptide) (LRAP).