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Network neighborhood for query Sequence : PTCD1_MOUSE

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PTCD1_MOUSE
SwissProt Accessions	Q8C2E4, Q5XK29, Q99KB2	Gene names	Ptcd1
Domain Architecture	No domain graphic available
Description	Pentatricopeptide repeat protein 1.
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

PTCD1_HUMAN
θ value	0 (rank : 1)	NC score	0.979979 (rank : 2)
Query Neighborhood Hits	20	Target Neighborhood Hits	52	Shared Neighborhood Hits	5
SwissProt Accessions	O75127, Q66K60, Q9UDV2	Gene names	PTCD1, KIAA0632
Domain Architecture	No domain graphic available
Description	Pentatricopeptide repeat protein 1.

PTCD1_MOUSE
θ value	0 (rank : 2)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	20	Target Neighborhood Hits	20	Shared Neighborhood Hits	20
SwissProt Accessions	Q8C2E4, Q5XK29, Q99KB2	Gene names	Ptcd1
Domain Architecture	No domain graphic available
Description	Pentatricopeptide repeat protein 1.

LPPRC_HUMAN
θ value	0.0431538 (rank : 3)	NC score	0.156259 (rank : 3)
Query Neighborhood Hits	20	Target Neighborhood Hits	45	Shared Neighborhood Hits	3
SwissProt Accessions	P42704	Gene names	LRPPRC, LRP130
Domain Architecture	No domain graphic available
Description	130 kDa leucine-rich protein (LRP 130) (GP130) (Leucine-rich PPR motif-containing protein).

BAT3_HUMAN
θ value	0.0736092 (rank : 4)	NC score	0.069572 (rank : 5)
Query Neighborhood Hits	20	Target Neighborhood Hits	490	Shared Neighborhood Hits	3
SwissProt Accessions	P46379, O95874, Q5SQ35, Q5SQ36, Q5SQ37, Q5SRP8, Q96SA6, Q9BCN4	Gene names	BAT3, G3
Domain Architecture
Description	Large proline-rich protein BAT3 (HLA-B-associated transcript 3) (Protein G3).

DEN4C_HUMAN
θ value	0.21417 (rank : 5)	NC score	0.071127 (rank : 4)
Query Neighborhood Hits	20	Target Neighborhood Hits	63	Shared Neighborhood Hits	4
SwissProt Accessions	Q5VZ89, Q6AI48, Q6ZUB3, Q8NCY7, Q9H6N4, Q9NUT1, Q9NWA5	Gene names	DENND4C, C9orf55
Domain Architecture	No domain graphic available
Description	DENN domain-containing protein 4C.

PRG4_MOUSE
θ value	0.21417 (rank : 6)	NC score	0.028914 (rank : 10)
Query Neighborhood Hits	20	Target Neighborhood Hits	624	Shared Neighborhood Hits	2
SwissProt Accessions	Q9JM99, Q3UEL1, Q3V198	Gene names	Prg4, Msf, Szp
Domain Architecture	No domain graphic available
Description	Proteoglycan-4 precursor (Lubricin) (Megakaryocyte-stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part].

PTPRN_MOUSE
θ value	0.47712 (rank : 7)	NC score	0.018451 (rank : 15)
Query Neighborhood Hits	20	Target Neighborhood Hits	240	Shared Neighborhood Hits	2
SwissProt Accessions	Q60673, Q62129	Gene names	Ptprn, Ptp35
Domain Architecture
Description	Receptor-type tyrosine-protein phosphatase-like N precursor (R-PTP-N) (PTP IA-2).

C8AP2_MOUSE
θ value	1.38821 (rank : 8)	NC score	0.041063 (rank : 8)
Query Neighborhood Hits	20	Target Neighborhood Hits	405	Shared Neighborhood Hits	4
SwissProt Accessions	Q9WUF3, Q9CSW2	Gene names	Casp8ap2, Flash
Domain Architecture	No domain graphic available
Description	CASP8-associated protein 2 (FLICE-associated huge protein).

CN102_MOUSE
θ value	1.81305 (rank : 9)	NC score	0.033556 (rank : 9)
Query Neighborhood Hits	20	Target Neighborhood Hits	37	Shared Neighborhood Hits	2
SwissProt Accessions	Q80XC6, Q8R3D7, Q99LT9	Gene names
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C14orf102 homolog.

SPAG1_MOUSE
θ value	1.81305 (rank : 10)	NC score	0.020982 (rank : 14)
Query Neighborhood Hits	20	Target Neighborhood Hits	218	Shared Neighborhood Hits	2
SwissProt Accessions	Q80ZX8, Q8CCK7, Q9QZJ3, Q9QZJ4	Gene names	Spag1, Tpis
Domain Architecture	No domain graphic available
Description	Sperm-associated antigen 1 (Infertility-related sperm protein Spag-1) (TPR-containing protein involved in spermatogenesis) (TPIS).

MYCPP_HUMAN
θ value	2.36792 (rank : 11)	NC score	0.046727 (rank : 7)
Query Neighborhood Hits	20	Target Neighborhood Hits	51	Shared Neighborhood Hits	3
SwissProt Accessions	Q7Z401, Q14655, Q86T77, Q8IVX2, Q8NB93	Gene names	MYCPBP, IRLB
Domain Architecture	No domain graphic available
Description	C-myc promoter-binding protein.

BAT3_MOUSE
θ value	3.0926 (rank : 12)	NC score	0.048680 (rank : 6)
Query Neighborhood Hits	20	Target Neighborhood Hits	518	Shared Neighborhood Hits	3
SwissProt Accessions	Q9Z1R2, Q8SNA3	Gene names	Bat3
Domain Architecture	No domain graphic available
Description	Large proline-rich protein BAT3 (HLA-B-associated transcript 3).

DYNA_HUMAN
θ value	3.0926 (rank : 13)	NC score	0.009068 (rank : 18)
Query Neighborhood Hits	20	Target Neighborhood Hits	1194	Shared Neighborhood Hits	2
SwissProt Accessions	Q14203, O95296, Q9BRM9, Q9UIU1, Q9UIU2	Gene names	DCTN1
Domain Architecture
Description	Dynactin-1 (150 kDa dynein-associated polypeptide) (DP-150) (DAP-150) (p150-glued) (p135).

ELOA1_MOUSE
θ value	3.0926 (rank : 14)	NC score	0.023318 (rank : 13)
Query Neighborhood Hits	20	Target Neighborhood Hits	152	Shared Neighborhood Hits	3
SwissProt Accessions	Q8CB77, Q80VB2, Q9R0Q5	Gene names	Tceb3
Domain Architecture
Description	Transcription elongation factor B polypeptide 3 (RNA polymerase II transcription factor SIII subunit A) (SIII p110) (Elongin-A) (EloA) (Elongin 110 kDa subunit).

CHMP3_MOUSE
θ value	6.88961 (rank : 15)	NC score	0.025100 (rank : 11)
Query Neighborhood Hits	20	Target Neighborhood Hits	70	Shared Neighborhood Hits	3
SwissProt Accessions	Q9CQ10, Q9D2Z2, Q9D7A5	Gene names	Vps24, Chmp3
Domain Architecture	No domain graphic available
Description	Charged multivesicular body protein 3 (Chromatin-modifying protein 3) (Vacuolar protein sorting-associated protein 24).

TENR_MOUSE
θ value	6.88961 (rank : 16)	NC score	0.004565 (rank : 20)
Query Neighborhood Hits	20	Target Neighborhood Hits	531	Shared Neighborhood Hits	2
SwissProt Accessions	Q8BYI9, O88717	Gene names	Tnr
Domain Architecture	No domain graphic available
Description	Tenascin-R precursor (TN-R) (Restrictin) (Janusin) (Neural recognition molecule J1-160/180).

ATF7_MOUSE
θ value	8.99809 (rank : 17)	NC score	0.009764 (rank : 17)
Query Neighborhood Hits	20	Target Neighborhood Hits	286	Shared Neighborhood Hits	2
SwissProt Accessions	Q8R0S1	Gene names	Atf7
Domain Architecture	No domain graphic available
Description	Cyclic AMP-dependent transcription factor ATF-7 (Activating transcription factor 7) (Transcription factor ATF-A).

CHMP3_HUMAN
θ value	8.99809 (rank : 18)	NC score	0.023629 (rank : 12)
Query Neighborhood Hits	20	Target Neighborhood Hits	54	Shared Neighborhood Hits	3
SwissProt Accessions	Q9Y3E7, Q53S71, Q53SU5, Q9NZ51	Gene names	VPS24, CHMP3, NEDF
Domain Architecture	No domain graphic available
Description	Charged multivesicular body protein 3 (Chromatin-modifying protein 3) (Vacuolar protein sorting-associated protein 24) (hVps24) (Neuroendocrine differentiation factor).

I17RA_MOUSE
θ value	8.99809 (rank : 19)	NC score	0.013525 (rank : 16)
Query Neighborhood Hits	20	Target Neighborhood Hits	29	Shared Neighborhood Hits	2
SwissProt Accessions	Q60943	Gene names	IL17ra, Il17r
Domain Architecture	No domain graphic available
Description	Interleukin-17 receptor A precursor (IL-17 receptor).

TEP1_HUMAN
θ value	8.99809 (rank : 20)	NC score	0.006199 (rank : 19)
Query Neighborhood Hits	20	Target Neighborhood Hits	371	Shared Neighborhood Hits	2
SwissProt Accessions	Q99973	Gene names	TEP1, TLP1, TP1
Domain Architecture
Description	Telomerase protein component 1 (Telomerase-associated protein 1) (Telomerase protein 1) (p240) (p80 telomerase homolog).

Hits sorted by NC score

PTCD1_MOUSE
NC score	0.999962 (rank : 1)	θ value	0 (rank : 2)
Query Neighborhood Hits	20	Target Neighborhood Hits	20	Shared Neighborhood Hits	20
SwissProt Accessions	Q8C2E4, Q5XK29, Q99KB2	Gene names	Ptcd1
Domain Architecture	No domain graphic available
Description	Pentatricopeptide repeat protein 1.

PTCD1_HUMAN
NC score	0.979979 (rank : 2)	θ value	0 (rank : 1)
Query Neighborhood Hits	20	Target Neighborhood Hits	52	Shared Neighborhood Hits	5
SwissProt Accessions	O75127, Q66K60, Q9UDV2	Gene names	PTCD1, KIAA0632
Domain Architecture	No domain graphic available
Description	Pentatricopeptide repeat protein 1.

LPPRC_HUMAN
NC score	0.156259 (rank : 3)	θ value	0.0431538 (rank : 3)
Query Neighborhood Hits	20	Target Neighborhood Hits	45	Shared Neighborhood Hits	3
SwissProt Accessions	P42704	Gene names	LRPPRC, LRP130
Domain Architecture	No domain graphic available
Description	130 kDa leucine-rich protein (LRP 130) (GP130) (Leucine-rich PPR motif-containing protein).

DEN4C_HUMAN
NC score	0.071127 (rank : 4)	θ value	0.21417 (rank : 5)
Query Neighborhood Hits	20	Target Neighborhood Hits	63	Shared Neighborhood Hits	4
SwissProt Accessions	Q5VZ89, Q6AI48, Q6ZUB3, Q8NCY7, Q9H6N4, Q9NUT1, Q9NWA5	Gene names	DENND4C, C9orf55
Domain Architecture	No domain graphic available
Description	DENN domain-containing protein 4C.

BAT3_HUMAN
NC score	0.069572 (rank : 5)	θ value	0.0736092 (rank : 4)
Query Neighborhood Hits	20	Target Neighborhood Hits	490	Shared Neighborhood Hits	3
SwissProt Accessions	P46379, O95874, Q5SQ35, Q5SQ36, Q5SQ37, Q5SRP8, Q96SA6, Q9BCN4	Gene names	BAT3, G3
Domain Architecture
Description	Large proline-rich protein BAT3 (HLA-B-associated transcript 3) (Protein G3).

BAT3_MOUSE
NC score	0.048680 (rank : 6)	θ value	3.0926 (rank : 12)
Query Neighborhood Hits	20	Target Neighborhood Hits	518	Shared Neighborhood Hits	3
SwissProt Accessions	Q9Z1R2, Q8SNA3	Gene names	Bat3
Domain Architecture	No domain graphic available
Description	Large proline-rich protein BAT3 (HLA-B-associated transcript 3).

MYCPP_HUMAN
NC score	0.046727 (rank : 7)	θ value	2.36792 (rank : 11)
Query Neighborhood Hits	20	Target Neighborhood Hits	51	Shared Neighborhood Hits	3
SwissProt Accessions	Q7Z401, Q14655, Q86T77, Q8IVX2, Q8NB93	Gene names	MYCPBP, IRLB
Domain Architecture	No domain graphic available
Description	C-myc promoter-binding protein.

C8AP2_MOUSE
NC score	0.041063 (rank : 8)	θ value	1.38821 (rank : 8)
Query Neighborhood Hits	20	Target Neighborhood Hits	405	Shared Neighborhood Hits	4
SwissProt Accessions	Q9WUF3, Q9CSW2	Gene names	Casp8ap2, Flash
Domain Architecture	No domain graphic available
Description	CASP8-associated protein 2 (FLICE-associated huge protein).

CN102_MOUSE
NC score	0.033556 (rank : 9)	θ value	1.81305 (rank : 9)
Query Neighborhood Hits	20	Target Neighborhood Hits	37	Shared Neighborhood Hits	2
SwissProt Accessions	Q80XC6, Q8R3D7, Q99LT9	Gene names
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C14orf102 homolog.

PRG4_MOUSE
NC score	0.028914 (rank : 10)	θ value	0.21417 (rank : 6)
Query Neighborhood Hits	20	Target Neighborhood Hits	624	Shared Neighborhood Hits	2
SwissProt Accessions	Q9JM99, Q3UEL1, Q3V198	Gene names	Prg4, Msf, Szp
Domain Architecture	No domain graphic available
Description	Proteoglycan-4 precursor (Lubricin) (Megakaryocyte-stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part].

CHMP3_MOUSE
NC score	0.025100 (rank : 11)	θ value	6.88961 (rank : 15)
Query Neighborhood Hits	20	Target Neighborhood Hits	70	Shared Neighborhood Hits	3
SwissProt Accessions	Q9CQ10, Q9D2Z2, Q9D7A5	Gene names	Vps24, Chmp3
Domain Architecture	No domain graphic available
Description	Charged multivesicular body protein 3 (Chromatin-modifying protein 3) (Vacuolar protein sorting-associated protein 24).

CHMP3_HUMAN
NC score	0.023629 (rank : 12)	θ value	8.99809 (rank : 18)
Query Neighborhood Hits	20	Target Neighborhood Hits	54	Shared Neighborhood Hits	3
SwissProt Accessions	Q9Y3E7, Q53S71, Q53SU5, Q9NZ51	Gene names	VPS24, CHMP3, NEDF
Domain Architecture	No domain graphic available
Description	Charged multivesicular body protein 3 (Chromatin-modifying protein 3) (Vacuolar protein sorting-associated protein 24) (hVps24) (Neuroendocrine differentiation factor).

ELOA1_MOUSE
NC score	0.023318 (rank : 13)	θ value	3.0926 (rank : 14)
Query Neighborhood Hits	20	Target Neighborhood Hits	152	Shared Neighborhood Hits	3
SwissProt Accessions	Q8CB77, Q80VB2, Q9R0Q5	Gene names	Tceb3
Domain Architecture
Description	Transcription elongation factor B polypeptide 3 (RNA polymerase II transcription factor SIII subunit A) (SIII p110) (Elongin-A) (EloA) (Elongin 110 kDa subunit).

SPAG1_MOUSE
NC score	0.020982 (rank : 14)	θ value	1.81305 (rank : 10)
Query Neighborhood Hits	20	Target Neighborhood Hits	218	Shared Neighborhood Hits	2
SwissProt Accessions	Q80ZX8, Q8CCK7, Q9QZJ3, Q9QZJ4	Gene names	Spag1, Tpis
Domain Architecture	No domain graphic available
Description	Sperm-associated antigen 1 (Infertility-related sperm protein Spag-1) (TPR-containing protein involved in spermatogenesis) (TPIS).

PTPRN_MOUSE
NC score	0.018451 (rank : 15)	θ value	0.47712 (rank : 7)
Query Neighborhood Hits	20	Target Neighborhood Hits	240	Shared Neighborhood Hits	2
SwissProt Accessions	Q60673, Q62129	Gene names	Ptprn, Ptp35
Domain Architecture
Description	Receptor-type tyrosine-protein phosphatase-like N precursor (R-PTP-N) (PTP IA-2).

I17RA_MOUSE
NC score	0.013525 (rank : 16)	θ value	8.99809 (rank : 19)
Query Neighborhood Hits	20	Target Neighborhood Hits	29	Shared Neighborhood Hits	2
SwissProt Accessions	Q60943	Gene names	IL17ra, Il17r
Domain Architecture	No domain graphic available
Description	Interleukin-17 receptor A precursor (IL-17 receptor).

ATF7_MOUSE
NC score	0.009764 (rank : 17)	θ value	8.99809 (rank : 17)
Query Neighborhood Hits	20	Target Neighborhood Hits	286	Shared Neighborhood Hits	2
SwissProt Accessions	Q8R0S1	Gene names	Atf7
Domain Architecture	No domain graphic available
Description	Cyclic AMP-dependent transcription factor ATF-7 (Activating transcription factor 7) (Transcription factor ATF-A).

DYNA_HUMAN
NC score	0.009068 (rank : 18)	θ value	3.0926 (rank : 13)
Query Neighborhood Hits	20	Target Neighborhood Hits	1194	Shared Neighborhood Hits	2
SwissProt Accessions	Q14203, O95296, Q9BRM9, Q9UIU1, Q9UIU2	Gene names	DCTN1
Domain Architecture
Description	Dynactin-1 (150 kDa dynein-associated polypeptide) (DP-150) (DAP-150) (p150-glued) (p135).

TEP1_HUMAN
NC score	0.006199 (rank : 19)	θ value	8.99809 (rank : 20)
Query Neighborhood Hits	20	Target Neighborhood Hits	371	Shared Neighborhood Hits	2
SwissProt Accessions	Q99973	Gene names	TEP1, TLP1, TP1
Domain Architecture
Description	Telomerase protein component 1 (Telomerase-associated protein 1) (Telomerase protein 1) (p240) (p80 telomerase homolog).

TENR_MOUSE
NC score	0.004565 (rank : 20)	θ value	6.88961 (rank : 16)
Query Neighborhood Hits	20	Target Neighborhood Hits	531	Shared Neighborhood Hits	2
SwissProt Accessions	Q8BYI9, O88717	Gene names	Tnr
Domain Architecture	No domain graphic available
Description	Tenascin-R precursor (TN-R) (Restrictin) (Janusin) (Neural recognition molecule J1-160/180).