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Network neighborhood for query Sequence : LSM3_MOUSE

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LSM3_MOUSE
SwissProt Accessions	P62311, Q9Y4Z1	Gene names	Lsm3
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm3.
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

LSM3_HUMAN
θ value	8.32485e-38 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	14	Target Neighborhood Hits	14	Shared Neighborhood Hits	14
SwissProt Accessions	P62310, Q9Y4Z1	Gene names	LSM3
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm3.

LSM3_MOUSE
θ value	8.32485e-38 (rank : 2)	NC score	0.999962 (rank : 2)
Query Neighborhood Hits	14	Target Neighborhood Hits	14	Shared Neighborhood Hits	14
SwissProt Accessions	P62311, Q9Y4Z1	Gene names	Lsm3
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm3.

SMD2_HUMAN
θ value	0.000158464 (rank : 3)	NC score	0.482487 (rank : 3)
Query Neighborhood Hits	14	Target Neighborhood Hits	12	Shared Neighborhood Hits	10
SwissProt Accessions	P62316, P43330	Gene names	SNRPD2
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D2 (snRNP core protein D2) (Sm-D2).

SMD2_MOUSE
θ value	0.000158464 (rank : 4)	NC score	0.482487 (rank : 4)
Query Neighborhood Hits	14	Target Neighborhood Hits	12	Shared Neighborhood Hits	10
SwissProt Accessions	P62317, P43330	Gene names	Snrpd2
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D2 (snRNP core protein D2) (Sm-D2).

LSM5_HUMAN
θ value	0.00020696 (rank : 5)	NC score	0.470855 (rank : 5)
Query Neighborhood Hits	14	Target Neighborhood Hits	20	Shared Neighborhood Hits	10
SwissProt Accessions	Q9Y4Y9	Gene names	LSM5
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm5.

LSM5_MOUSE
θ value	0.00020696 (rank : 6)	NC score	0.470855 (rank : 6)
Query Neighborhood Hits	14	Target Neighborhood Hits	20	Shared Neighborhood Hits	10
SwissProt Accessions	P62322	Gene names	Lsm5
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm5.

LSM2_HUMAN
θ value	0.279714 (rank : 7)	NC score	0.194758 (rank : 7)
Query Neighborhood Hits	14	Target Neighborhood Hits	14	Shared Neighborhood Hits	4
SwissProt Accessions	Q9Y333	Gene names	LSM2, C6orf28, G7b
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm2 (snRNP core Sm-like protein Sm-x5) (Small nuclear ribonuclear protein D homolog) (Protein G7b).

LSM2_MOUSE
θ value	0.279714 (rank : 8)	NC score	0.194758 (rank : 8)
Query Neighborhood Hits	14	Target Neighborhood Hits	14	Shared Neighborhood Hits	4
SwissProt Accessions	O35900	Gene names	Lsm2, G7b
Domain Architecture	No domain graphic available
Description	U6 snRNA-associated Sm-like protein LSm2 (snRNP core Sm-like protein Sm-x5) (Protein G7b).

RSMB_HUMAN
θ value	0.813845 (rank : 9)	NC score	0.176404 (rank : 10)
Query Neighborhood Hits	14	Target Neighborhood Hits	117	Shared Neighborhood Hits	10
SwissProt Accessions	P14678, Q15490, Q9UIS5	Gene names	SNRPB, COD, SNRPB1
Domain Architecture
Description	Small nuclear ribonucleoprotein-associated proteins B and B' (snRNP-B) (Sm protein B/B') (Sm-B/Sm-B') (SmB/SmB').

RSMB_MOUSE
θ value	0.813845 (rank : 10)	NC score	0.179493 (rank : 9)
Query Neighborhood Hits	14	Target Neighborhood Hits	93	Shared Neighborhood Hits	10
SwissProt Accessions	P27048, Q3UJT1	Gene names	Snrpb
Domain Architecture
Description	Small nuclear ribonucleoprotein-associated protein B (snRNP-B) (Sm protein B) (Sm-B) (SmB).

SVIL_HUMAN
θ value	1.06291 (rank : 11)	NC score	0.077535 (rank : 13)
Query Neighborhood Hits	14	Target Neighborhood Hits	232	Shared Neighborhood Hits	4
SwissProt Accessions	O95425, O60611, O60612, Q5VZK5, Q5VZK6, Q9H1R7	Gene names	SVIL
Domain Architecture	No domain graphic available
Description	Supervillin (Archvillin) (p205/p250).

RSMN_HUMAN
θ value	1.38821 (rank : 12)	NC score	0.171717 (rank : 11)
Query Neighborhood Hits	14	Target Neighborhood Hits	110	Shared Neighborhood Hits	10
SwissProt Accessions	P63162, P14648, P17135	Gene names	SNRPN, HCERN3, SMN
Domain Architecture	No domain graphic available
Description	Small nuclear ribonucleoprotein-associated protein N (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D) (Tissue-specific-splicing protein).

RSMN_MOUSE
θ value	1.38821 (rank : 13)	NC score	0.171717 (rank : 12)
Query Neighborhood Hits	14	Target Neighborhood Hits	110	Shared Neighborhood Hits	10
SwissProt Accessions	P63163, P14648, P17135	Gene names	Snrpn, Smn
Domain Architecture	No domain graphic available
Description	Small nuclear ribonucleoprotein-associated protein N (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D) (Tissue-specific-splicing protein).

SVIL_MOUSE
θ value	1.81305 (rank : 14)	NC score	0.069051 (rank : 16)
Query Neighborhood Hits	14	Target Neighborhood Hits	439	Shared Neighborhood Hits	4
SwissProt Accessions	Q8K4L3	Gene names	Svil
Domain Architecture	No domain graphic available
Description	Supervillin (Archvillin) (p205/p250).

RUXE_HUMAN
θ value	θ > 10 (rank : 15)	NC score	0.073182 (rank : 14)
Query Neighborhood Hits	14	Target Neighborhood Hits	14	Shared Neighborhood Hits	6
SwissProt Accessions	P62304, P08578, Q15498	Gene names	SNRPE
Domain Architecture
Description	Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE).

RUXE_MOUSE
θ value	θ > 10 (rank : 16)	NC score	0.073182 (rank : 15)
Query Neighborhood Hits	14	Target Neighborhood Hits	14	Shared Neighborhood Hits	6
SwissProt Accessions	P62305, P08578, Q15498	Gene names	Snrpe
Domain Architecture
Description	Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE).

Hits sorted by NC score

LSM3_HUMAN
NC score	0.999962 (rank : 1)	θ value	8.32485e-38 (rank : 1)
Query Neighborhood Hits	14	Target Neighborhood Hits	14	Shared Neighborhood Hits	14
SwissProt Accessions	P62310, Q9Y4Z1	Gene names	LSM3
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm3.

LSM3_MOUSE
NC score	0.999962 (rank : 2)	θ value	8.32485e-38 (rank : 2)
Query Neighborhood Hits	14	Target Neighborhood Hits	14	Shared Neighborhood Hits	14
SwissProt Accessions	P62311, Q9Y4Z1	Gene names	Lsm3
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm3.

SMD2_HUMAN
NC score	0.482487 (rank : 3)	θ value	0.000158464 (rank : 3)
Query Neighborhood Hits	14	Target Neighborhood Hits	12	Shared Neighborhood Hits	10
SwissProt Accessions	P62316, P43330	Gene names	SNRPD2
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D2 (snRNP core protein D2) (Sm-D2).

SMD2_MOUSE
NC score	0.482487 (rank : 4)	θ value	0.000158464 (rank : 4)
Query Neighborhood Hits	14	Target Neighborhood Hits	12	Shared Neighborhood Hits	10
SwissProt Accessions	P62317, P43330	Gene names	Snrpd2
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D2 (snRNP core protein D2) (Sm-D2).

LSM5_HUMAN
NC score	0.470855 (rank : 5)	θ value	0.00020696 (rank : 5)
Query Neighborhood Hits	14	Target Neighborhood Hits	20	Shared Neighborhood Hits	10
SwissProt Accessions	Q9Y4Y9	Gene names	LSM5
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm5.

LSM5_MOUSE
NC score	0.470855 (rank : 6)	θ value	0.00020696 (rank : 6)
Query Neighborhood Hits	14	Target Neighborhood Hits	20	Shared Neighborhood Hits	10
SwissProt Accessions	P62322	Gene names	Lsm5
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm5.

LSM2_HUMAN
NC score	0.194758 (rank : 7)	θ value	0.279714 (rank : 7)
Query Neighborhood Hits	14	Target Neighborhood Hits	14	Shared Neighborhood Hits	4
SwissProt Accessions	Q9Y333	Gene names	LSM2, C6orf28, G7b
Domain Architecture
Description	U6 snRNA-associated Sm-like protein LSm2 (snRNP core Sm-like protein Sm-x5) (Small nuclear ribonuclear protein D homolog) (Protein G7b).

LSM2_MOUSE
NC score	0.194758 (rank : 8)	θ value	0.279714 (rank : 8)
Query Neighborhood Hits	14	Target Neighborhood Hits	14	Shared Neighborhood Hits	4
SwissProt Accessions	O35900	Gene names	Lsm2, G7b
Domain Architecture	No domain graphic available
Description	U6 snRNA-associated Sm-like protein LSm2 (snRNP core Sm-like protein Sm-x5) (Protein G7b).

RSMB_MOUSE
NC score	0.179493 (rank : 9)	θ value	0.813845 (rank : 10)
Query Neighborhood Hits	14	Target Neighborhood Hits	93	Shared Neighborhood Hits	10
SwissProt Accessions	P27048, Q3UJT1	Gene names	Snrpb
Domain Architecture
Description	Small nuclear ribonucleoprotein-associated protein B (snRNP-B) (Sm protein B) (Sm-B) (SmB).

RSMB_HUMAN
NC score	0.176404 (rank : 10)	θ value	0.813845 (rank : 9)
Query Neighborhood Hits	14	Target Neighborhood Hits	117	Shared Neighborhood Hits	10
SwissProt Accessions	P14678, Q15490, Q9UIS5	Gene names	SNRPB, COD, SNRPB1
Domain Architecture
Description	Small nuclear ribonucleoprotein-associated proteins B and B' (snRNP-B) (Sm protein B/B') (Sm-B/Sm-B') (SmB/SmB').

RSMN_HUMAN
NC score	0.171717 (rank : 11)	θ value	1.38821 (rank : 12)
Query Neighborhood Hits	14	Target Neighborhood Hits	110	Shared Neighborhood Hits	10
SwissProt Accessions	P63162, P14648, P17135	Gene names	SNRPN, HCERN3, SMN
Domain Architecture	No domain graphic available
Description	Small nuclear ribonucleoprotein-associated protein N (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D) (Tissue-specific-splicing protein).

RSMN_MOUSE
NC score	0.171717 (rank : 12)	θ value	1.38821 (rank : 13)
Query Neighborhood Hits	14	Target Neighborhood Hits	110	Shared Neighborhood Hits	10
SwissProt Accessions	P63163, P14648, P17135	Gene names	Snrpn, Smn
Domain Architecture	No domain graphic available
Description	Small nuclear ribonucleoprotein-associated protein N (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D) (Tissue-specific-splicing protein).

SVIL_HUMAN
NC score	0.077535 (rank : 13)	θ value	1.06291 (rank : 11)
Query Neighborhood Hits	14	Target Neighborhood Hits	232	Shared Neighborhood Hits	4
SwissProt Accessions	O95425, O60611, O60612, Q5VZK5, Q5VZK6, Q9H1R7	Gene names	SVIL
Domain Architecture	No domain graphic available
Description	Supervillin (Archvillin) (p205/p250).

RUXE_HUMAN
NC score	0.073182 (rank : 14)	θ value	θ > 10 (rank : 15)
Query Neighborhood Hits	14	Target Neighborhood Hits	14	Shared Neighborhood Hits	6
SwissProt Accessions	P62304, P08578, Q15498	Gene names	SNRPE
Domain Architecture
Description	Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE).

RUXE_MOUSE
NC score	0.073182 (rank : 15)	θ value	θ > 10 (rank : 16)
Query Neighborhood Hits	14	Target Neighborhood Hits	14	Shared Neighborhood Hits	6
SwissProt Accessions	P62305, P08578, Q15498	Gene names	Snrpe
Domain Architecture
Description	Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE).

SVIL_MOUSE
NC score	0.069051 (rank : 16)	θ value	1.81305 (rank : 14)
Query Neighborhood Hits	14	Target Neighborhood Hits	439	Shared Neighborhood Hits	4
SwissProt Accessions	Q8K4L3	Gene names	Svil
Domain Architecture	No domain graphic available
Description	Supervillin (Archvillin) (p205/p250).