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Network neighborhood for query Sequence : HNRH3_HUMAN

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HNRH3_HUMAN
 
SwissProt Accessions P31942, Q9BSX1, Q9NP53, Q9NP96, Q9NPA7, Q9NPI4, Q9UFU4, Q9Y4J5 Gene names HNRPH3
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) (hnRNP 2H9).
Rank Plots



Hits sorted by θ


HNRH1_HUMAN
 
θ value 7.15887e-98 (rank : 1) NC score 0.992052 (rank : 4)
Query Neighborhood Hits 44 Target Neighborhood Hits 46 Shared Neighborhood Hits 34
SwissProt Accessions P31943 Gene names HNRPH1, HNRPH
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein H (hnRNP H).
HNRH1_MOUSE
 
θ value 7.15887e-98 (rank : 2) NC score 0.992051 (rank : 5)
Query Neighborhood Hits 44 Target Neighborhood Hits 46 Shared Neighborhood Hits 34
SwissProt Accessions O35737 Gene names Hnrph1, Hnrph
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein H (hnRNP H).
HNRH2_HUMAN
 
θ value 2.54619e-95 (rank : 3) NC score 0.993242 (rank : 2)
Query Neighborhood Hits 44 Target Neighborhood Hits 42 Shared Neighborhood Hits 32
SwissProt Accessions P55795, Q9HHA7 Gene names HNRPH2, FTP3
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein H' (hnRNP H') (FTP-3).
HNRH2_MOUSE
 
θ value 4.34313e-95 (rank : 4) NC score 0.993049 (rank : 3)
Query Neighborhood Hits 44 Target Neighborhood Hits 45 Shared Neighborhood Hits 32
SwissProt Accessions P70333, Q3THV9 Gene names Hnrph2
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein H' (hnRNP H').
HNRPF_MOUSE
 
θ value 6.07444e-89 (rank : 5) NC score 0.988447 (rank : 6)
Query Neighborhood Hits 44 Target Neighborhood Hits 43 Shared Neighborhood Hits 29
SwissProt Accessions Q9Z2X1, Q5FWK2, Q8BVU8, Q8K2U9, Q8R0E7 Gene names Hnrpf
Domain
Architecture

No domain graphic available

Description Heterogeneous nuclear ribonucleoprotein F (hnRNP F).
HNRPF_HUMAN
 
θ value 2.30828e-88 (rank : 6) NC score 0.987426 (rank : 7)
Query Neighborhood Hits 44 Target Neighborhood Hits 43 Shared Neighborhood Hits 29
SwissProt Accessions P52597, Q5T0N2, Q96AU2 Gene names HNRPF
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein F (hnRNP F) (Nucleolin-like protein mcs94-1).
HNRH3_HUMAN
 
θ value 4.85792e-54 (rank : 7) NC score 0.999962 (rank : 1)
Query Neighborhood Hits 44 Target Neighborhood Hits 44 Shared Neighborhood Hits 44
SwissProt Accessions P31942, Q9BSX1, Q9NP53, Q9NP96, Q9NPA7, Q9NPI4, Q9UFU4, Q9Y4J5 Gene names HNRPH3
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) (hnRNP 2H9).
GRSF1_MOUSE
 
θ value 3.28125e-26 (rank : 8) NC score 0.898163 (rank : 9)
Query Neighborhood Hits 44 Target Neighborhood Hits 60 Shared Neighborhood Hits 29
SwissProt Accessions Q8C5Q4, Q8BR05, Q8BRG7 Gene names Grsf1
Domain
Architecture

No domain graphic available

Description G-rich sequence factor 1 (GRSF-1).
GRSF1_HUMAN
 
θ value 9.54697e-26 (rank : 9) NC score 0.901229 (rank : 8)
Query Neighborhood Hits 44 Target Neighborhood Hits 50 Shared Neighborhood Hits 26
SwissProt Accessions Q12849, Q6ZST3, Q8NBD2 Gene names GRSF1
Domain
Architecture
Description G-rich sequence factor 1 (GRSF-1).
RBM12_HUMAN
 
θ value 1.06045e-08 (rank : 10) NC score 0.594162 (rank : 10)
Query Neighborhood Hits 44 Target Neighborhood Hits 298 Shared Neighborhood Hits 26
SwissProt Accessions Q9NTZ6, O94865, Q8N3B1, Q9H196 Gene names RBM12, KIAA0765
Domain
Architecture
Description RNA-binding protein 12 (RNA-binding motif protein 12) (SH3/WW domain anchor protein in the nucleus) (SWAN).
RBM12_MOUSE
 
θ value 1.80886e-08 (rank : 11) NC score 0.582571 (rank : 11)
Query Neighborhood Hits 44 Target Neighborhood Hits 313 Shared Neighborhood Hits 26
SwissProt Accessions Q8R4X3, Q8K373, Q8R302, Q9CS80 Gene names Rbm12
Domain
Architecture
Description RNA-binding protein 12 (RNA-binding motif protein 12) (SH3/WW domain anchor protein in the nucleus) (SWAN).
RBM19_HUMAN
 
θ value 6.87365e-08 (rank : 12) NC score 0.351534 (rank : 12)
Query Neighborhood Hits 44 Target Neighborhood Hits 331 Shared Neighborhood Hits 42
SwissProt Accessions Q9Y4C8, Q9BPY6, Q9UFN5 Gene names RBM19, KIAA0682
Domain
Architecture
Description Probable RNA-binding protein 19 (RNA-binding motif protein 19).
RBM19_MOUSE
 
θ value 1.53129e-07 (rank : 13) NC score 0.349426 (rank : 13)
Query Neighborhood Hits 44 Target Neighborhood Hits 296 Shared Neighborhood Hits 42
SwissProt Accessions Q8R3C6, Q8BHR0, Q9CW63 Gene names Rbm19
Domain
Architecture

No domain graphic available

Description Probable RNA-binding protein 19 (RNA-binding motif protein 19).
RNPC1_HUMAN
 
θ value 0.125558 (rank : 14) NC score 0.093046 (rank : 28)
Query Neighborhood Hits 44 Target Neighborhood Hits 189 Shared Neighborhood Hits 40
SwissProt Accessions Q9H0Z9, Q15350, Q15351, Q9BYK3, Q9BYK4 Gene names RNPC1, SEB4
Domain
Architecture
Description RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA-binding protein SEB4) (CLL-associated antigen KW-5).
ACF_MOUSE
 
θ value 0.21417 (rank : 15) NC score 0.060162 (rank : 48)
Query Neighborhood Hits 44 Target Neighborhood Hits 205 Shared Neighborhood Hits 32
SwissProt Accessions Q5YD48, Q5FW55, Q5YD47 Gene names Acf, Asp
Domain
Architecture

No domain graphic available

Description APOBEC1 complementation factor (APOBEC1-stimulating protein).
IF4B_HUMAN
 
θ value 0.21417 (rank : 16) NC score 0.187439 (rank : 16)
Query Neighborhood Hits 44 Target Neighborhood Hits 417 Shared Neighborhood Hits 32
SwissProt Accessions P23588 Gene names EIF4B
Domain
Architecture
Description Eukaryotic translation initiation factor 4B (eIF-4B).
DAZP1_HUMAN
 
θ value 0.365318 (rank : 17) NC score 0.145457 (rank : 21)
Query Neighborhood Hits 44 Target Neighborhood Hits 313 Shared Neighborhood Hits 40
SwissProt Accessions Q96EP5, Q96MJ3, Q9NRR9 Gene names DAZAP1
Domain
Architecture
Description DAZ-associated protein 1 (Deleted in azoospermia-associated protein 1).
RNPC1_MOUSE
 
θ value 0.365318 (rank : 18) NC score 0.079278 (rank : 32)
Query Neighborhood Hits 44 Target Neighborhood Hits 190 Shared Neighborhood Hits 36
SwissProt Accessions Q62176, Q922Z2 Gene names Rnpc1, Seb4, Seb4l
Domain
Architecture
Description RNA-binding region-containing protein 1 (ssDNA-binding protein SEB4).
DAZP1_MOUSE
 
θ value 0.47712 (rank : 19) NC score 0.147550 (rank : 20)
Query Neighborhood Hits 44 Target Neighborhood Hits 313 Shared Neighborhood Hits 39
SwissProt Accessions Q9JII5 Gene names Dazap1
Domain
Architecture
Description DAZ-associated protein 1 (Deleted in azoospermia-associated protein 1).
IF4B_MOUSE
 
θ value 0.62314 (rank : 20) NC score 0.171020 (rank : 18)
Query Neighborhood Hits 44 Target Neighborhood Hits 368 Shared Neighborhood Hits 30
SwissProt Accessions Q8BGD9, Q3TD64 Gene names Eif4b
Domain
Architecture

No domain graphic available

Description Eukaryotic translation initiation factor 4B (eIF-4B).
NUCL_HUMAN
 
θ value 0.62314 (rank : 21) NC score 0.173722 (rank : 17)
Query Neighborhood Hits 44 Target Neighborhood Hits 415 Shared Neighborhood Hits 40
SwissProt Accessions P19338, Q53SK1, Q8NB06 Gene names NCL
Domain
Architecture
Description Nucleolin (Protein C23).
SART3_HUMAN
 
θ value 1.06291 (rank : 22) NC score 0.206696 (rank : 14)
Query Neighborhood Hits 44 Target Neighborhood Hits 301 Shared Neighborhood Hits 41
SwissProt Accessions Q15020, Q58F06, Q8IUS1, Q96J95 Gene names SART3, KIAA0156, TIP110
Domain
Architecture

No domain graphic available

Description Squamous cell carcinoma antigen recognized by T-cells 3 (SART-3) (hSART-3) (Tat-interacting protein of 110 kDa) (Tip110).
REFP2_MOUSE
 
θ value 1.38821 (rank : 23) NC score 0.118043 (rank : 23)
Query Neighborhood Hits 44 Target Neighborhood Hits 113 Shared Neighborhood Hits 27
SwissProt Accessions Q9JJW6, Q8C869 Gene names Refbp2, Ref2
Domain
Architecture
Description RNA and export factor-binding protein 2.
TNC6B_HUMAN
 
θ value 1.38821 (rank : 24) NC score 0.021612 (rank : 59)
Query Neighborhood Hits 44 Target Neighborhood Hits 256 Shared Neighborhood Hits 5
SwissProt Accessions Q9UPQ9, Q5TH52, Q8TBX2 Gene names TNRC6B, KIAA1093
Domain
Architecture
Description Trinucleotide repeat-containing 6B protein.
PABP2_HUMAN
 
θ value 1.81305 (rank : 25) NC score 0.095275 (rank : 26)
Query Neighborhood Hits 44 Target Neighborhood Hits 212 Shared Neighborhood Hits 31
SwissProt Accessions Q86U42, O43484 Gene names PABPN1, PAB2, PABP2
Domain
Architecture
Description Polyadenylate-binding protein 2 (Poly(A)-binding protein 2) (Poly(A)- binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1).
PABP2_MOUSE
 
θ value 1.81305 (rank : 26) NC score 0.094866 (rank : 27)
Query Neighborhood Hits 44 Target Neighborhood Hits 214 Shared Neighborhood Hits 31
SwissProt Accessions Q8CCS6, O35935 Gene names Pabpn1, Pab2, Pabp2
Domain
Architecture
Description Polyadenylate-binding protein 2 (Poly(A)-binding protein 2) (Poly(A)- binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1).
SAFB1_HUMAN
 
θ value 2.36792 (rank : 27) NC score 0.032297 (rank : 58)
Query Neighborhood Hits 44 Target Neighborhood Hits 493 Shared Neighborhood Hits 18
SwissProt Accessions Q15424, O60406, Q59HH8 Gene names SAFB, HAP, HET, SAFB1
Domain
Architecture
Description Scaffold attachment factor B (Scaffold attachment factor B1) (SAF-B) (HSP27 estrogen response element-TATA box-binding protein) (HSP27 ERE- TATA-binding protein).
SART3_MOUSE
 
θ value 2.36792 (rank : 28) NC score 0.203980 (rank : 15)
Query Neighborhood Hits 44 Target Neighborhood Hits 341 Shared Neighborhood Hits 41
SwissProt Accessions Q9JLI8, Q6ZQI2, Q8BPK9, Q8C3B7, Q8CFU9 Gene names Sart3, Kiaa0156
Domain
Architecture

No domain graphic available

Description Squamous cell carcinoma antigen recognized by T-cells 3 (SART-3) (mSART-3) (Tumor-rejection antigen SART3).
ELAV1_MOUSE
 
θ value 3.0926 (rank : 29) NC score 0.076763 (rank : 33)
Query Neighborhood Hits 44 Target Neighborhood Hits 219 Shared Neighborhood Hits 38
SwissProt Accessions P70372, Q60745 Gene names Elavl1, Elra, Hua
Domain
Architecture
Description ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like generic protein) (MelG).
ACF_HUMAN
 
θ value 4.03905 (rank : 30) NC score 0.047850 (rank : 55)
Query Neighborhood Hits 44 Target Neighborhood Hits 193 Shared Neighborhood Hits 29
SwissProt Accessions Q9NQ94, Q5SZQ0, Q9NQ93, Q9NQX8, Q9NQX9, Q9NXC9, Q9NZD3 Gene names ACF, ASP
Domain
Architecture

No domain graphic available

Description APOBEC1 complementation factor (APOBEC1-stimulating protein).
RBM5_HUMAN
 
θ value 4.03905 (rank : 31) NC score 0.040521 (rank : 57)
Query Neighborhood Hits 44 Target Neighborhood Hits 216 Shared Neighborhood Hits 24
SwissProt Accessions P52756, Q93021, Q9BU14, Q9UKY8, Q9UL24 Gene names RBM5
Domain
Architecture
Description RNA-binding protein 5 (RNA-binding motif protein 5) (Tumor suppressor LUCA15) (Protein G15) (NY-REN-9 antigen).
RBM5_MOUSE
 
θ value 4.03905 (rank : 32) NC score 0.040595 (rank : 56)
Query Neighborhood Hits 44 Target Neighborhood Hits 216 Shared Neighborhood Hits 24
SwissProt Accessions Q91YE7, Q3UZ19, Q99KV9 Gene names Rbm5, Luca15
Domain
Architecture

No domain graphic available

Description RNA-binding protein 5 (RNA-binding motif protein 5) (Tumor suppressor LUCA15).
BOLL_MOUSE
 
θ value 5.27518 (rank : 33) NC score 0.056608 (rank : 50)
Query Neighborhood Hits 44 Target Neighborhood Hits 195 Shared Neighborhood Hits 33
SwissProt Accessions Q924M5, Q9D4V2 Gene names Boll, Boule
Domain
Architecture
Description Protein boule-like.
SFPQ_HUMAN
 
θ value 5.27518 (rank : 34) NC score 0.073795 (rank : 36)
Query Neighborhood Hits 44 Target Neighborhood Hits 986 Shared Neighborhood Hits 31
SwissProt Accessions P23246, P30808 Gene names SFPQ, PSF
Domain
Architecture
Description Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100 kDa DNA-pairing protein) (hPOMp100).
SFPQ_MOUSE
 
θ value 5.27518 (rank : 35) NC score 0.074839 (rank : 35)
Query Neighborhood Hits 44 Target Neighborhood Hits 958 Shared Neighborhood Hits 33
SwissProt Accessions Q8VIJ6, Q9ERW2 Gene names Sfpq
Domain
Architecture

No domain graphic available

Description Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit).
TADBP_MOUSE
 
θ value 5.27518 (rank : 36) NC score 0.065500 (rank : 43)
Query Neighborhood Hits 44 Target Neighborhood Hits 187 Shared Neighborhood Hits 32
SwissProt Accessions Q921F2 Gene names Tardbp, Tdp43
Domain
Architecture
Description TAR DNA-binding protein 43 (TDP-43).
ELAV1_HUMAN
 
θ value 6.88961 (rank : 37) NC score 0.068741 (rank : 40)
Query Neighborhood Hits 44 Target Neighborhood Hits 225 Shared Neighborhood Hits 38
SwissProt Accessions Q15717, Q9BTT1 Gene names ELAVL1, HUR
Domain
Architecture
Description ELAV-like protein 1 (Hu-antigen R) (HuR).
TADBP_HUMAN
 
θ value 6.88961 (rank : 38) NC score 0.064905 (rank : 44)
Query Neighborhood Hits 44 Target Neighborhood Hits 196 Shared Neighborhood Hits 33
SwissProt Accessions Q13148, Q96DJ0 Gene names TARDBP, TDP43
Domain
Architecture
Description TAR DNA-binding protein 43 (TDP-43).
THOC4_HUMAN
 
θ value 6.88961 (rank : 39) NC score 0.067463 (rank : 42)
Query Neighborhood Hits 44 Target Neighborhood Hits 119 Shared Neighborhood Hits 23
SwissProt Accessions Q86V81, O43672 Gene names THOC4, ALY, BEF
Domain
Architecture
Description THO complex subunit 4 (Tho4) (Ally of AML-1 and LEF-1) (Transcriptional coactivator Aly/REF) (bZIP-enhancing factor BEF).
THOC4_MOUSE
 
θ value 6.88961 (rank : 40) NC score 0.067556 (rank : 41)
Query Neighborhood Hits 44 Target Neighborhood Hits 117 Shared Neighborhood Hits 24
SwissProt Accessions O08583, Q8CBM4, Q9JJW7 Gene names Thoc4, Aly, Ref1, Refbp1
Domain
Architecture
Description THO complex subunit 4 (Tho4) (RNA and export factor-binding protein 1) (REF1-I) (Ally of AML-1 and LEF-1) (Aly/REF).
MTMR5_HUMAN
 
θ value 8.99809 (rank : 41) NC score 0.004641 (rank : 60)
Query Neighborhood Hits 44 Target Neighborhood Hits 141 Shared Neighborhood Hits 2
SwissProt Accessions O95248, O60228, Q5JXD8, Q5PPM2, Q96GR9, Q9UGB8 Gene names SBF1, MTMR5
Domain
Architecture
Description SET-binding factor 1 (Sbf1) (Myotubularin-related protein 5).
NONO_HUMAN
 
θ value 8.99809 (rank : 42) NC score 0.070058 (rank : 39)
Query Neighborhood Hits 44 Target Neighborhood Hits 441 Shared Neighborhood Hits 34
SwissProt Accessions Q15233, O00201, P30807, Q12786, Q9BQC5 Gene names NONO, NRB54
Domain
Architecture
Description Non-POU domain-containing octamer-binding protein (NonO protein) (54 kDa nuclear RNA- and DNA-binding protein) (p54(nrb)) (p54nrb) (55 kDa nuclear protein) (NMT55) (DNA-binding p52/p100 complex, 52 kDa subunit).
NONO_MOUSE
 
θ value 8.99809 (rank : 43) NC score 0.070100 (rank : 38)
Query Neighborhood Hits 44 Target Neighborhood Hits 444 Shared Neighborhood Hits 34
SwissProt Accessions Q99K48, Q63887, Q9CYQ4, Q9DBP2 Gene names Nono
Domain
Architecture

No domain graphic available

Description Non-POU domain-containing octamer-binding protein (NonO protein).
NUCL_MOUSE
 
θ value 8.99809 (rank : 44) NC score 0.160936 (rank : 19)
Query Neighborhood Hits 44 Target Neighborhood Hits 425 Shared Neighborhood Hits 40
SwissProt Accessions P09405, Q548M9, Q61991, Q99K50 Gene names Ncl, Nuc
Domain
Architecture
Description Nucleolin (Protein C23).
BOLL_HUMAN
 
θ value θ > 10 (rank : 45) NC score 0.052405 (rank : 54)
Query Neighborhood Hits 44 Target Neighborhood Hits 227 Shared Neighborhood Hits 32
SwissProt Accessions Q8N9W6, Q969U3 Gene names BOLL, BOULE
Domain
Architecture
Description Protein boule-like.
EPAB2_MOUSE
 
θ value θ > 10 (rank : 46) NC score 0.075856 (rank : 34)
Query Neighborhood Hits 44 Target Neighborhood Hits 136 Shared Neighborhood Hits 24
SwissProt Accessions Q5XFR0 Gene names Pabpnl1, Epabp2
Domain
Architecture

No domain graphic available

Description Embryonic polyadenylate-binding protein 2 (Embryonic poly(A)-binding protein 2) (Embryonic poly(A)-binding protein type II) (ePABP2) (Poly(A)-binding protein nuclear-like 1).
EWS_HUMAN
 
θ value θ > 10 (rank : 47) NC score 0.062267 (rank : 45)
Query Neighborhood Hits 44 Target Neighborhood Hits 249 Shared Neighborhood Hits 20
SwissProt Accessions Q01844, Q92635 Gene names EWSR1, EWS
Domain
Architecture
Description RNA-binding protein EWS (EWS oncogene) (Ewing sarcoma breakpoint region 1 protein).
HNRPD_HUMAN
 
θ value θ > 10 (rank : 48) NC score 0.071486 (rank : 37)
Query Neighborhood Hits 44 Target Neighborhood Hits 221 Shared Neighborhood Hits 33
SwissProt Accessions Q14103, Q01858, Q14100, Q14101, Q14102 Gene names HNRPD, AUF1
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) (AU-rich element RNA-binding protein 1).
HNRPD_MOUSE
 
θ value θ > 10 (rank : 49) NC score 0.061255 (rank : 47)
Query Neighborhood Hits 44 Target Neighborhood Hits 220 Shared Neighborhood Hits 31
SwissProt Accessions Q60668, Q60667, Q80ZJ0, Q91X94 Gene names Hnrpd, Auf1
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) (AU-rich element RNA-binding protein 1).
PABP3_HUMAN
 
θ value θ > 10 (rank : 50) NC score 0.054328 (rank : 51)
Query Neighborhood Hits 44 Target Neighborhood Hits 259 Shared Neighborhood Hits 34
SwissProt Accessions Q9H361, Q8NHV0, Q9H086 Gene names PABPC3, PABP3, PABPL3
Domain
Architecture
Description Polyadenylate-binding protein 3 (Poly(A)-binding protein 3) (PABP 3) (Testis-specific poly(A)-binding protein).
PM14_HUMAN
 
θ value θ > 10 (rank : 51) NC score 0.092503 (rank : 29)
Query Neighborhood Hits 44 Target Neighborhood Hits 134 Shared Neighborhood Hits 22
SwissProt Accessions Q9Y3B4 Gene names SF3B14
Domain
Architecture
Description Pre-mRNA branch site protein p14 (SF3B 14 kDa subunit).
PM14_MOUSE
 
θ value θ > 10 (rank : 52) NC score 0.092503 (rank : 30)
Query Neighborhood Hits 44 Target Neighborhood Hits 134 Shared Neighborhood Hits 22
SwissProt Accessions P59708, Q3U9T9 Gene names Sf3b14
Domain
Architecture
Description Pre-mRNA branch site protein p14 (SF3B 14 kDa subunit).
RAVR1_MOUSE
 
θ value θ > 10 (rank : 53) NC score 0.061494 (rank : 46)
Query Neighborhood Hits 44 Target Neighborhood Hits 179 Shared Neighborhood Hits 29
SwissProt Accessions Q9CW46, Q5DTT6, Q811K0, Q8C3Z1, Q8CA14 Gene names Raver1, Kiaa1978
Domain
Architecture

No domain graphic available

Description Ribonucleoprotein PTB-binding 1 (Protein raver-1).
RBM28_HUMAN
 
θ value θ > 10 (rank : 54) NC score 0.086485 (rank : 31)
Query Neighborhood Hits 44 Target Neighborhood Hits 307 Shared Neighborhood Hits 35
SwissProt Accessions Q9NW13, Q96CV3 Gene names RBM28
Domain
Architecture

No domain graphic available

Description RNA-binding protein 28 (RNA-binding motif protein 28).
RBM28_MOUSE
 
θ value θ > 10 (rank : 55) NC score 0.119101 (rank : 22)
Query Neighborhood Hits 44 Target Neighborhood Hits 368 Shared Neighborhood Hits 37
SwissProt Accessions Q8CGC6, Q8BG25, Q8VEJ8, Q9CS22, Q9CSE6 Gene names Rbm28
Domain
Architecture

No domain graphic available

Description RNA-binding protein 28 (RNA-binding motif protein 28).
RBM34_HUMAN
 
θ value θ > 10 (rank : 56) NC score 0.057219 (rank : 49)
Query Neighborhood Hits 44 Target Neighborhood Hits 208 Shared Neighborhood Hits 27
SwissProt Accessions P42696, Q8N2Z8, Q9H5A1 Gene names RBM34, KIAA0117
Domain
Architecture
Description RNA-binding protein 34 (RNA-binding motif protein 34).
RBM8A_HUMAN
 
θ value θ > 10 (rank : 57) NC score 0.101390 (rank : 24)
Query Neighborhood Hits 44 Target Neighborhood Hits 198 Shared Neighborhood Hits 35
SwissProt Accessions Q9Y5S9, Q6FHD1, Q9GZX8, Q9NZI4 Gene names RBM8A, RBM8
Domain
Architecture
Description RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A) (RNA-binding protein Y14) (Binder of OVCA1- 1) (BOV-1).
RBM8A_MOUSE
 
θ value θ > 10 (rank : 58) NC score 0.101390 (rank : 25)
Query Neighborhood Hits 44 Target Neighborhood Hits 198 Shared Neighborhood Hits 35
SwissProt Accessions Q9CWZ3, Q9D6U5 Gene names Rbm8a, Rbm8
Domain
Architecture
Description RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A).
ROAA_HUMAN
 
θ value θ > 10 (rank : 59) NC score 0.052948 (rank : 52)
Query Neighborhood Hits 44 Target Neighborhood Hits 201 Shared Neighborhood Hits 30
SwissProt Accessions Q99729, Q04150, Q8N7U3, Q9BQ99 Gene names HNRPAB, ABBP1
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) (APOBEC-1- binding protein 1) (ABBP-1).
ROAA_MOUSE
 
θ value θ > 10 (rank : 60) NC score 0.052886 (rank : 53)
Query Neighborhood Hits 44 Target Neighborhood Hits 208 Shared Neighborhood Hits 30
SwissProt Accessions Q99020, Q8BPE0 Gene names Hnrpab, Cbf-a, Cgbfa
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) (CArG-binding factor-A) (CBF-A).

Hits sorted by NC score


HNRH3_HUMAN
 
NC score 0.999962 (rank : 1) θ value 4.85792e-54 (rank : 7)
Query Neighborhood Hits 44 Target Neighborhood Hits 44 Shared Neighborhood Hits 44
SwissProt Accessions P31942, Q9BSX1, Q9NP53, Q9NP96, Q9NPA7, Q9NPI4, Q9UFU4, Q9Y4J5 Gene names HNRPH3
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) (hnRNP 2H9).
HNRH2_HUMAN
 
NC score 0.993242 (rank : 2) θ value 2.54619e-95 (rank : 3)
Query Neighborhood Hits 44 Target Neighborhood Hits 42 Shared Neighborhood Hits 32
SwissProt Accessions P55795, Q9HHA7 Gene names HNRPH2, FTP3
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein H' (hnRNP H') (FTP-3).
HNRH2_MOUSE
 
NC score 0.993049 (rank : 3) θ value 4.34313e-95 (rank : 4)
Query Neighborhood Hits 44 Target Neighborhood Hits 45 Shared Neighborhood Hits 32
SwissProt Accessions P70333, Q3THV9 Gene names Hnrph2
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein H' (hnRNP H').
HNRH1_HUMAN
 
NC score 0.992052 (rank : 4) θ value 7.15887e-98 (rank : 1)
Query Neighborhood Hits 44 Target Neighborhood Hits 46 Shared Neighborhood Hits 34
SwissProt Accessions P31943 Gene names HNRPH1, HNRPH
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein H (hnRNP H).
HNRH1_MOUSE
 
NC score 0.992051 (rank : 5) θ value 7.15887e-98 (rank : 2)
Query Neighborhood Hits 44 Target Neighborhood Hits 46 Shared Neighborhood Hits 34
SwissProt Accessions O35737 Gene names Hnrph1, Hnrph
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein H (hnRNP H).
HNRPF_MOUSE
 
NC score 0.988447 (rank : 6) θ value 6.07444e-89 (rank : 5)
Query Neighborhood Hits 44 Target Neighborhood Hits 43 Shared Neighborhood Hits 29
SwissProt Accessions Q9Z2X1, Q5FWK2, Q8BVU8, Q8K2U9, Q8R0E7 Gene names Hnrpf
Domain
Architecture

No domain graphic available

Description Heterogeneous nuclear ribonucleoprotein F (hnRNP F).
HNRPF_HUMAN
 
NC score 0.987426 (rank : 7) θ value 2.30828e-88 (rank : 6)
Query Neighborhood Hits 44 Target Neighborhood Hits 43 Shared Neighborhood Hits 29
SwissProt Accessions P52597, Q5T0N2, Q96AU2 Gene names HNRPF
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein F (hnRNP F) (Nucleolin-like protein mcs94-1).
GRSF1_HUMAN
 
NC score 0.901229 (rank : 8) θ value 9.54697e-26 (rank : 9)
Query Neighborhood Hits 44 Target Neighborhood Hits 50 Shared Neighborhood Hits 26
SwissProt Accessions Q12849, Q6ZST3, Q8NBD2 Gene names GRSF1
Domain
Architecture
Description G-rich sequence factor 1 (GRSF-1).
GRSF1_MOUSE
 
NC score 0.898163 (rank : 9) θ value 3.28125e-26 (rank : 8)
Query Neighborhood Hits 44 Target Neighborhood Hits 60 Shared Neighborhood Hits 29
SwissProt Accessions Q8C5Q4, Q8BR05, Q8BRG7 Gene names Grsf1
Domain
Architecture

No domain graphic available

Description G-rich sequence factor 1 (GRSF-1).
RBM12_HUMAN
 
NC score 0.594162 (rank : 10) θ value 1.06045e-08 (rank : 10)
Query Neighborhood Hits 44 Target Neighborhood Hits 298 Shared Neighborhood Hits 26
SwissProt Accessions Q9NTZ6, O94865, Q8N3B1, Q9H196 Gene names RBM12, KIAA0765
Domain
Architecture
Description RNA-binding protein 12 (RNA-binding motif protein 12) (SH3/WW domain anchor protein in the nucleus) (SWAN).
RBM12_MOUSE
 
NC score 0.582571 (rank : 11) θ value 1.80886e-08 (rank : 11)
Query Neighborhood Hits 44 Target Neighborhood Hits 313 Shared Neighborhood Hits 26
SwissProt Accessions Q8R4X3, Q8K373, Q8R302, Q9CS80 Gene names Rbm12
Domain
Architecture
Description RNA-binding protein 12 (RNA-binding motif protein 12) (SH3/WW domain anchor protein in the nucleus) (SWAN).
RBM19_HUMAN
 
NC score 0.351534 (rank : 12) θ value 6.87365e-08 (rank : 12)
Query Neighborhood Hits 44 Target Neighborhood Hits 331 Shared Neighborhood Hits 42
SwissProt Accessions Q9Y4C8, Q9BPY6, Q9UFN5 Gene names RBM19, KIAA0682
Domain
Architecture
Description Probable RNA-binding protein 19 (RNA-binding motif protein 19).
RBM19_MOUSE
 
NC score 0.349426 (rank : 13) θ value 1.53129e-07 (rank : 13)
Query Neighborhood Hits 44 Target Neighborhood Hits 296 Shared Neighborhood Hits 42
SwissProt Accessions Q8R3C6, Q8BHR0, Q9CW63 Gene names Rbm19
Domain
Architecture

No domain graphic available

Description Probable RNA-binding protein 19 (RNA-binding motif protein 19).
SART3_HUMAN
 
NC score 0.206696 (rank : 14) θ value 1.06291 (rank : 22)
Query Neighborhood Hits 44 Target Neighborhood Hits 301 Shared Neighborhood Hits 41
SwissProt Accessions Q15020, Q58F06, Q8IUS1, Q96J95 Gene names SART3, KIAA0156, TIP110
Domain
Architecture

No domain graphic available

Description Squamous cell carcinoma antigen recognized by T-cells 3 (SART-3) (hSART-3) (Tat-interacting protein of 110 kDa) (Tip110).
SART3_MOUSE
 
NC score 0.203980 (rank : 15) θ value 2.36792 (rank : 28)
Query Neighborhood Hits 44 Target Neighborhood Hits 341 Shared Neighborhood Hits 41
SwissProt Accessions Q9JLI8, Q6ZQI2, Q8BPK9, Q8C3B7, Q8CFU9 Gene names Sart3, Kiaa0156
Domain
Architecture

No domain graphic available

Description Squamous cell carcinoma antigen recognized by T-cells 3 (SART-3) (mSART-3) (Tumor-rejection antigen SART3).
IF4B_HUMAN
 
NC score 0.187439 (rank : 16) θ value 0.21417 (rank : 16)
Query Neighborhood Hits 44 Target Neighborhood Hits 417 Shared Neighborhood Hits 32
SwissProt Accessions P23588 Gene names EIF4B
Domain
Architecture
Description Eukaryotic translation initiation factor 4B (eIF-4B).
NUCL_HUMAN
 
NC score 0.173722 (rank : 17) θ value 0.62314 (rank : 21)
Query Neighborhood Hits 44 Target Neighborhood Hits 415 Shared Neighborhood Hits 40
SwissProt Accessions P19338, Q53SK1, Q8NB06 Gene names NCL
Domain
Architecture
Description Nucleolin (Protein C23).
IF4B_MOUSE
 
NC score 0.171020 (rank : 18) θ value 0.62314 (rank : 20)
Query Neighborhood Hits 44 Target Neighborhood Hits 368 Shared Neighborhood Hits 30
SwissProt Accessions Q8BGD9, Q3TD64 Gene names Eif4b
Domain
Architecture

No domain graphic available

Description Eukaryotic translation initiation factor 4B (eIF-4B).
NUCL_MOUSE
 
NC score 0.160936 (rank : 19) θ value 8.99809 (rank : 44)
Query Neighborhood Hits 44 Target Neighborhood Hits 425 Shared Neighborhood Hits 40
SwissProt Accessions P09405, Q548M9, Q61991, Q99K50 Gene names Ncl, Nuc
Domain
Architecture
Description Nucleolin (Protein C23).
DAZP1_MOUSE
 
NC score 0.147550 (rank : 20) θ value 0.47712 (rank : 19)
Query Neighborhood Hits 44 Target Neighborhood Hits 313 Shared Neighborhood Hits 39
SwissProt Accessions Q9JII5 Gene names Dazap1
Domain
Architecture
Description DAZ-associated protein 1 (Deleted in azoospermia-associated protein 1).
DAZP1_HUMAN
 
NC score 0.145457 (rank : 21) θ value 0.365318 (rank : 17)
Query Neighborhood Hits 44 Target Neighborhood Hits 313 Shared Neighborhood Hits 40
SwissProt Accessions Q96EP5, Q96MJ3, Q9NRR9 Gene names DAZAP1
Domain
Architecture
Description DAZ-associated protein 1 (Deleted in azoospermia-associated protein 1).
RBM28_MOUSE
 
NC score 0.119101 (rank : 22) θ value θ > 10 (rank : 55)
Query Neighborhood Hits 44 Target Neighborhood Hits 368 Shared Neighborhood Hits 37
SwissProt Accessions Q8CGC6, Q8BG25, Q8VEJ8, Q9CS22, Q9CSE6 Gene names Rbm28
Domain
Architecture

No domain graphic available

Description RNA-binding protein 28 (RNA-binding motif protein 28).
REFP2_MOUSE
 
NC score 0.118043 (rank : 23) θ value 1.38821 (rank : 23)
Query Neighborhood Hits 44 Target Neighborhood Hits 113 Shared Neighborhood Hits 27
SwissProt Accessions Q9JJW6, Q8C869 Gene names Refbp2, Ref2
Domain
Architecture
Description RNA and export factor-binding protein 2.
RBM8A_HUMAN
 
NC score 0.101390 (rank : 24) θ value θ > 10 (rank : 57)
Query Neighborhood Hits 44 Target Neighborhood Hits 198 Shared Neighborhood Hits 35
SwissProt Accessions Q9Y5S9, Q6FHD1, Q9GZX8, Q9NZI4 Gene names RBM8A, RBM8
Domain
Architecture
Description RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A) (RNA-binding protein Y14) (Binder of OVCA1- 1) (BOV-1).
RBM8A_MOUSE
 
NC score 0.101390 (rank : 25) θ value θ > 10 (rank : 58)
Query Neighborhood Hits 44 Target Neighborhood Hits 198 Shared Neighborhood Hits 35
SwissProt Accessions Q9CWZ3, Q9D6U5 Gene names Rbm8a, Rbm8
Domain
Architecture
Description RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A).
PABP2_HUMAN
 
NC score 0.095275 (rank : 26) θ value 1.81305 (rank : 25)
Query Neighborhood Hits 44 Target Neighborhood Hits 212 Shared Neighborhood Hits 31
SwissProt Accessions Q86U42, O43484 Gene names PABPN1, PAB2, PABP2
Domain
Architecture
Description Polyadenylate-binding protein 2 (Poly(A)-binding protein 2) (Poly(A)- binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1).
PABP2_MOUSE
 
NC score 0.094866 (rank : 27) θ value 1.81305 (rank : 26)
Query Neighborhood Hits 44 Target Neighborhood Hits 214 Shared Neighborhood Hits 31
SwissProt Accessions Q8CCS6, O35935 Gene names Pabpn1, Pab2, Pabp2
Domain
Architecture
Description Polyadenylate-binding protein 2 (Poly(A)-binding protein 2) (Poly(A)- binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1).
RNPC1_HUMAN
 
NC score 0.093046 (rank : 28) θ value 0.125558 (rank : 14)
Query Neighborhood Hits 44 Target Neighborhood Hits 189 Shared Neighborhood Hits 40
SwissProt Accessions Q9H0Z9, Q15350, Q15351, Q9BYK3, Q9BYK4 Gene names RNPC1, SEB4
Domain
Architecture
Description RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA-binding protein SEB4) (CLL-associated antigen KW-5).
PM14_HUMAN
 
NC score 0.092503 (rank : 29) θ value θ > 10 (rank : 51)
Query Neighborhood Hits 44 Target Neighborhood Hits 134 Shared Neighborhood Hits 22
SwissProt Accessions Q9Y3B4 Gene names SF3B14
Domain
Architecture
Description Pre-mRNA branch site protein p14 (SF3B 14 kDa subunit).
PM14_MOUSE
 
NC score 0.092503 (rank : 30) θ value θ > 10 (rank : 52)
Query Neighborhood Hits 44 Target Neighborhood Hits 134 Shared Neighborhood Hits 22
SwissProt Accessions P59708, Q3U9T9 Gene names Sf3b14
Domain
Architecture
Description Pre-mRNA branch site protein p14 (SF3B 14 kDa subunit).
RBM28_HUMAN
 
NC score 0.086485 (rank : 31) θ value θ > 10 (rank : 54)
Query Neighborhood Hits 44 Target Neighborhood Hits 307 Shared Neighborhood Hits 35
SwissProt Accessions Q9NW13, Q96CV3 Gene names RBM28
Domain
Architecture

No domain graphic available

Description RNA-binding protein 28 (RNA-binding motif protein 28).
RNPC1_MOUSE
 
NC score 0.079278 (rank : 32) θ value 0.365318 (rank : 18)
Query Neighborhood Hits 44 Target Neighborhood Hits 190 Shared Neighborhood Hits 36
SwissProt Accessions Q62176, Q922Z2 Gene names Rnpc1, Seb4, Seb4l
Domain
Architecture
Description RNA-binding region-containing protein 1 (ssDNA-binding protein SEB4).
ELAV1_MOUSE
 
NC score 0.076763 (rank : 33) θ value 3.0926 (rank : 29)
Query Neighborhood Hits 44 Target Neighborhood Hits 219 Shared Neighborhood Hits 38
SwissProt Accessions P70372, Q60745 Gene names Elavl1, Elra, Hua
Domain
Architecture
Description ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like generic protein) (MelG).
EPAB2_MOUSE
 
NC score 0.075856 (rank : 34) θ value θ > 10 (rank : 46)
Query Neighborhood Hits 44 Target Neighborhood Hits 136 Shared Neighborhood Hits 24
SwissProt Accessions Q5XFR0 Gene names Pabpnl1, Epabp2
Domain
Architecture

No domain graphic available

Description Embryonic polyadenylate-binding protein 2 (Embryonic poly(A)-binding protein 2) (Embryonic poly(A)-binding protein type II) (ePABP2) (Poly(A)-binding protein nuclear-like 1).
SFPQ_MOUSE
 
NC score 0.074839 (rank : 35) θ value 5.27518 (rank : 35)
Query Neighborhood Hits 44 Target Neighborhood Hits 958 Shared Neighborhood Hits 33
SwissProt Accessions Q8VIJ6, Q9ERW2 Gene names Sfpq
Domain
Architecture

No domain graphic available

Description Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit).
SFPQ_HUMAN
 
NC score 0.073795 (rank : 36) θ value 5.27518 (rank : 34)
Query Neighborhood Hits 44 Target Neighborhood Hits 986 Shared Neighborhood Hits 31
SwissProt Accessions P23246, P30808 Gene names SFPQ, PSF
Domain
Architecture
Description Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100 kDa DNA-pairing protein) (hPOMp100).
HNRPD_HUMAN
 
NC score 0.071486 (rank : 37) θ value θ > 10 (rank : 48)
Query Neighborhood Hits 44 Target Neighborhood Hits 221 Shared Neighborhood Hits 33
SwissProt Accessions Q14103, Q01858, Q14100, Q14101, Q14102 Gene names HNRPD, AUF1
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) (AU-rich element RNA-binding protein 1).
NONO_MOUSE
 
NC score 0.070100 (rank : 38) θ value 8.99809 (rank : 43)
Query Neighborhood Hits 44 Target Neighborhood Hits 444 Shared Neighborhood Hits 34
SwissProt Accessions Q99K48, Q63887, Q9CYQ4, Q9DBP2 Gene names Nono
Domain
Architecture

No domain graphic available

Description Non-POU domain-containing octamer-binding protein (NonO protein).
NONO_HUMAN
 
NC score 0.070058 (rank : 39) θ value 8.99809 (rank : 42)
Query Neighborhood Hits 44 Target Neighborhood Hits 441 Shared Neighborhood Hits 34
SwissProt Accessions Q15233, O00201, P30807, Q12786, Q9BQC5 Gene names NONO, NRB54
Domain
Architecture
Description Non-POU domain-containing octamer-binding protein (NonO protein) (54 kDa nuclear RNA- and DNA-binding protein) (p54(nrb)) (p54nrb) (55 kDa nuclear protein) (NMT55) (DNA-binding p52/p100 complex, 52 kDa subunit).
ELAV1_HUMAN
 
NC score 0.068741 (rank : 40) θ value 6.88961 (rank : 37)
Query Neighborhood Hits 44 Target Neighborhood Hits 225 Shared Neighborhood Hits 38
SwissProt Accessions Q15717, Q9BTT1 Gene names ELAVL1, HUR
Domain
Architecture
Description ELAV-like protein 1 (Hu-antigen R) (HuR).
THOC4_MOUSE
 
NC score 0.067556 (rank : 41) θ value 6.88961 (rank : 40)
Query Neighborhood Hits 44 Target Neighborhood Hits 117 Shared Neighborhood Hits 24
SwissProt Accessions O08583, Q8CBM4, Q9JJW7 Gene names Thoc4, Aly, Ref1, Refbp1
Domain
Architecture
Description THO complex subunit 4 (Tho4) (RNA and export factor-binding protein 1) (REF1-I) (Ally of AML-1 and LEF-1) (Aly/REF).
THOC4_HUMAN
 
NC score 0.067463 (rank : 42) θ value 6.88961 (rank : 39)
Query Neighborhood Hits 44 Target Neighborhood Hits 119 Shared Neighborhood Hits 23
SwissProt Accessions Q86V81, O43672 Gene names THOC4, ALY, BEF
Domain
Architecture
Description THO complex subunit 4 (Tho4) (Ally of AML-1 and LEF-1) (Transcriptional coactivator Aly/REF) (bZIP-enhancing factor BEF).
TADBP_MOUSE
 
NC score 0.065500 (rank : 43) θ value 5.27518 (rank : 36)
Query Neighborhood Hits 44 Target Neighborhood Hits 187 Shared Neighborhood Hits 32
SwissProt Accessions Q921F2 Gene names Tardbp, Tdp43
Domain
Architecture
Description TAR DNA-binding protein 43 (TDP-43).
TADBP_HUMAN
 
NC score 0.064905 (rank : 44) θ value 6.88961 (rank : 38)
Query Neighborhood Hits 44 Target Neighborhood Hits 196 Shared Neighborhood Hits 33
SwissProt Accessions Q13148, Q96DJ0 Gene names TARDBP, TDP43
Domain
Architecture
Description TAR DNA-binding protein 43 (TDP-43).
EWS_HUMAN
 
NC score 0.062267 (rank : 45) θ value θ > 10 (rank : 47)
Query Neighborhood Hits 44 Target Neighborhood Hits 249 Shared Neighborhood Hits 20
SwissProt Accessions Q01844, Q92635 Gene names EWSR1, EWS
Domain
Architecture
Description RNA-binding protein EWS (EWS oncogene) (Ewing sarcoma breakpoint region 1 protein).
RAVR1_MOUSE
 
NC score 0.061494 (rank : 46) θ value θ > 10 (rank : 53)
Query Neighborhood Hits 44 Target Neighborhood Hits 179 Shared Neighborhood Hits 29
SwissProt Accessions Q9CW46, Q5DTT6, Q811K0, Q8C3Z1, Q8CA14 Gene names Raver1, Kiaa1978
Domain
Architecture

No domain graphic available

Description Ribonucleoprotein PTB-binding 1 (Protein raver-1).
HNRPD_MOUSE
 
NC score 0.061255 (rank : 47) θ value θ > 10 (rank : 49)
Query Neighborhood Hits 44 Target Neighborhood Hits 220 Shared Neighborhood Hits 31
SwissProt Accessions Q60668, Q60667, Q80ZJ0, Q91X94 Gene names Hnrpd, Auf1
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) (AU-rich element RNA-binding protein 1).
ACF_MOUSE
 
NC score 0.060162 (rank : 48) θ value 0.21417 (rank : 15)
Query Neighborhood Hits 44 Target Neighborhood Hits 205 Shared Neighborhood Hits 32
SwissProt Accessions Q5YD48, Q5FW55, Q5YD47 Gene names Acf, Asp
Domain
Architecture

No domain graphic available

Description APOBEC1 complementation factor (APOBEC1-stimulating protein).
RBM34_HUMAN
 
NC score 0.057219 (rank : 49) θ value θ > 10 (rank : 56)
Query Neighborhood Hits 44 Target Neighborhood Hits 208 Shared Neighborhood Hits 27
SwissProt Accessions P42696, Q8N2Z8, Q9H5A1 Gene names RBM34, KIAA0117
Domain
Architecture
Description RNA-binding protein 34 (RNA-binding motif protein 34).
BOLL_MOUSE
 
NC score 0.056608 (rank : 50) θ value 5.27518 (rank : 33)
Query Neighborhood Hits 44 Target Neighborhood Hits 195 Shared Neighborhood Hits 33
SwissProt Accessions Q924M5, Q9D4V2 Gene names Boll, Boule
Domain
Architecture
Description Protein boule-like.
PABP3_HUMAN
 
NC score 0.054328 (rank : 51) θ value θ > 10 (rank : 50)
Query Neighborhood Hits 44 Target Neighborhood Hits 259 Shared Neighborhood Hits 34
SwissProt Accessions Q9H361, Q8NHV0, Q9H086 Gene names PABPC3, PABP3, PABPL3
Domain
Architecture
Description Polyadenylate-binding protein 3 (Poly(A)-binding protein 3) (PABP 3) (Testis-specific poly(A)-binding protein).
ROAA_HUMAN
 
NC score 0.052948 (rank : 52) θ value θ > 10 (rank : 59)
Query Neighborhood Hits 44 Target Neighborhood Hits 201 Shared Neighborhood Hits 30
SwissProt Accessions Q99729, Q04150, Q8N7U3, Q9BQ99 Gene names HNRPAB, ABBP1
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) (APOBEC-1- binding protein 1) (ABBP-1).
ROAA_MOUSE
 
NC score 0.052886 (rank : 53) θ value θ > 10 (rank : 60)
Query Neighborhood Hits 44 Target Neighborhood Hits 208 Shared Neighborhood Hits 30
SwissProt Accessions Q99020, Q8BPE0 Gene names Hnrpab, Cbf-a, Cgbfa
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) (CArG-binding factor-A) (CBF-A).
BOLL_HUMAN
 
NC score 0.052405 (rank : 54) θ value θ > 10 (rank : 45)
Query Neighborhood Hits 44 Target Neighborhood Hits 227 Shared Neighborhood Hits 32
SwissProt Accessions Q8N9W6, Q969U3 Gene names BOLL, BOULE
Domain
Architecture
Description Protein boule-like.
ACF_HUMAN
 
NC score 0.047850 (rank : 55) θ value 4.03905 (rank : 30)
Query Neighborhood Hits 44 Target Neighborhood Hits 193 Shared Neighborhood Hits 29
SwissProt Accessions Q9NQ94, Q5SZQ0, Q9NQ93, Q9NQX8, Q9NQX9, Q9NXC9, Q9NZD3 Gene names ACF, ASP
Domain
Architecture

No domain graphic available

Description APOBEC1 complementation factor (APOBEC1-stimulating protein).
RBM5_MOUSE
 
NC score 0.040595 (rank : 56) θ value 4.03905 (rank : 32)
Query Neighborhood Hits 44 Target Neighborhood Hits 216 Shared Neighborhood Hits 24
SwissProt Accessions Q91YE7, Q3UZ19, Q99KV9 Gene names Rbm5, Luca15
Domain
Architecture

No domain graphic available

Description RNA-binding protein 5 (RNA-binding motif protein 5) (Tumor suppressor LUCA15).
RBM5_HUMAN
 
NC score 0.040521 (rank : 57) θ value 4.03905 (rank : 31)
Query Neighborhood Hits 44 Target Neighborhood Hits 216 Shared Neighborhood Hits 24
SwissProt Accessions P52756, Q93021, Q9BU14, Q9UKY8, Q9UL24 Gene names RBM5
Domain
Architecture
Description RNA-binding protein 5 (RNA-binding motif protein 5) (Tumor suppressor LUCA15) (Protein G15) (NY-REN-9 antigen).
SAFB1_HUMAN
 
NC score 0.032297 (rank : 58) θ value 2.36792 (rank : 27)
Query Neighborhood Hits 44 Target Neighborhood Hits 493 Shared Neighborhood Hits 18
SwissProt Accessions Q15424, O60406, Q59HH8 Gene names SAFB, HAP, HET, SAFB1
Domain
Architecture
Description Scaffold attachment factor B (Scaffold attachment factor B1) (SAF-B) (HSP27 estrogen response element-TATA box-binding protein) (HSP27 ERE- TATA-binding protein).
TNC6B_HUMAN
 
NC score 0.021612 (rank : 59) θ value 1.38821 (rank : 24)
Query Neighborhood Hits 44 Target Neighborhood Hits 256 Shared Neighborhood Hits 5
SwissProt Accessions Q9UPQ9, Q5TH52, Q8TBX2 Gene names TNRC6B, KIAA1093
Domain
Architecture
Description Trinucleotide repeat-containing 6B protein.
MTMR5_HUMAN
 
NC score 0.004641 (rank : 60) θ value 8.99809 (rank : 41)
Query Neighborhood Hits 44 Target Neighborhood Hits 141 Shared Neighborhood Hits 2
SwissProt Accessions O95248, O60228, Q5JXD8, Q5PPM2, Q96GR9, Q9UGB8 Gene names SBF1, MTMR5
Domain
Architecture
Description SET-binding factor 1 (Sbf1) (Myotubularin-related protein 5).