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Network neighborhood for query Sequence : CI090_HUMAN

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CI090_HUMAN
SwissProt Accessions	Q69YI7, Q8WU12	Gene names	C9orf90
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C9orf90.
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

CI090_HUMAN
θ value	1.47893e-127 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	20	Target Neighborhood Hits	20	Shared Neighborhood Hits	20
SwissProt Accessions	Q69YI7, Q8WU12	Gene names	C9orf90
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C9orf90.

CI090_MOUSE
θ value	3.90098e-120 (rank : 2)	NC score	0.993766 (rank : 2)
Query Neighborhood Hits	20	Target Neighborhood Hits	14	Shared Neighborhood Hits	9
SwissProt Accessions	Q6PFD7	Gene names
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C9orf90 homolog.

TSNA1_HUMAN
θ value	1.74796e-11 (rank : 3)	NC score	0.368556 (rank : 3)
Query Neighborhood Hits	20	Target Neighborhood Hits	178	Shared Neighborhood Hits	3
SwissProt Accessions	Q96NA8	Gene names	TSNARE1
Domain Architecture	No domain graphic available
Description	t-SNARE domain-containing protein 1.

GBP1_HUMAN
θ value	1.81305 (rank : 4)	NC score	0.022858 (rank : 9)
Query Neighborhood Hits	20	Target Neighborhood Hits	339	Shared Neighborhood Hits	9
SwissProt Accessions	P32455	Gene names	GBP1
Domain Architecture
Description	Interferon-induced guanylate-binding protein 1 (GTP-binding protein 1) (Guanine nucleotide-binding protein 1) (GBP-1) (HuGBP-1).

REV1_MOUSE
θ value	2.36792 (rank : 5)	NC score	0.043330 (rank : 5)
Query Neighborhood Hits	20	Target Neighborhood Hits	67	Shared Neighborhood Hits	3
SwissProt Accessions	Q920Q2, Q9QXV2	Gene names	Rev1l, Rev1
Domain Architecture	No domain graphic available
Description	DNA repair protein REV1 (EC 2.7.7.-) (Rev1-like terminal deoxycytidyl transferase).

TBP_HUMAN
θ value	2.36792 (rank : 6)	NC score	0.046757 (rank : 4)
Query Neighborhood Hits	20	Target Neighborhood Hits	76	Shared Neighborhood Hits	4
SwissProt Accessions	P20226, Q16845, Q9UC02	Gene names	TBP, TF2D, TFIID
Domain Architecture
Description	TATA-box-binding protein (TATA-box factor) (TATA-binding factor) (TATA sequence-binding protein) (Transcription initiation factor TFIID TBP subunit).

TXLNA_MOUSE
θ value	2.36792 (rank : 7)	NC score	0.023579 (rank : 8)
Query Neighborhood Hits	20	Target Neighborhood Hits	846	Shared Neighborhood Hits	11
SwissProt Accessions	Q6PAM1, Q6P1E5	Gene names	Txlna, Txln
Domain Architecture	No domain graphic available
Description	Alpha-taxilin.

BRAP_MOUSE
θ value	4.03905 (rank : 8)	NC score	0.021395 (rank : 10)
Query Neighborhood Hits	20	Target Neighborhood Hits	409	Shared Neighborhood Hits	5
SwissProt Accessions	Q99MP8, Q8CC00, Q8CHX1, Q99MP7, Q9CXX8	Gene names	Brap
Domain Architecture	No domain graphic available
Description	BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes mitogenic signal propagation) (IMP).

LGMN_HUMAN
θ value	4.03905 (rank : 9)	NC score	0.028260 (rank : 6)
Query Neighborhood Hits	20	Target Neighborhood Hits	23	Shared Neighborhood Hits	2
SwissProt Accessions	Q99538, O00123	Gene names	LGMN, PRSC1
Domain Architecture
Description	Legumain precursor (EC 3.4.22.34) (Asparaginyl endopeptidase) (Protease, cysteine 1).

FOXP2_HUMAN
θ value	5.27518 (rank : 10)	NC score	0.020277 (rank : 13)
Query Neighborhood Hits	20	Target Neighborhood Hits	366	Shared Neighborhood Hits	7
SwissProt Accessions	O15409, Q6ZND1, Q75MJ3, Q8IZE0, Q8N0W2, Q8N6B7, Q8N6B8, Q8NFQ1, Q8NFQ2, Q8NFQ3, Q8NFQ4, Q8TD74	Gene names	FOXP2, CAGH44, TNRC10
Domain Architecture
Description	Forkhead box protein P2 (CAG repeat protein 44) (Trinucleotide repeat- containing gene 10 protein).

FOXP2_MOUSE
θ value	5.27518 (rank : 11)	NC score	0.020300 (rank : 12)
Query Neighborhood Hits	20	Target Neighborhood Hits	366	Shared Neighborhood Hits	8
SwissProt Accessions	P58463, Q6PD37, Q8C4F0, Q8R441	Gene names	Foxp2
Domain Architecture
Description	Forkhead box protein P2.

HDAC5_MOUSE
θ value	5.27518 (rank : 12)	NC score	0.018748 (rank : 14)
Query Neighborhood Hits	20	Target Neighborhood Hits	310	Shared Neighborhood Hits	8
SwissProt Accessions	Q9Z2V6, Q9JL73	Gene names	Hdac5
Domain Architecture
Description	Histone deacetylase 5 (HD5) (Histone deacetylase mHDA1).

INCE_HUMAN
θ value	5.27518 (rank : 13)	NC score	0.012433 (rank : 15)
Query Neighborhood Hits	20	Target Neighborhood Hits	978	Shared Neighborhood Hits	9
SwissProt Accessions	Q9NQS7, Q5Y192	Gene names	INCENP
Domain Architecture
Description	Inner centromere protein.

MSRE_HUMAN
θ value	5.27518 (rank : 14)	NC score	0.010940 (rank : 17)
Query Neighborhood Hits	20	Target Neighborhood Hits	298	Shared Neighborhood Hits	2
SwissProt Accessions	P21757, P21759, Q45F10	Gene names	MSR1, SCARA1
Domain Architecture
Description	Macrophage scavenger receptor types I and II (Macrophage acetylated LDL receptor I and II) (Scavenger receptor class A member 1) (CD204 antigen).

TXLNA_HUMAN
θ value	5.27518 (rank : 15)	NC score	0.020876 (rank : 11)
Query Neighborhood Hits	20	Target Neighborhood Hits	982	Shared Neighborhood Hits	11
SwissProt Accessions	P40222, Q66K62, Q86T54, Q86T85, Q86T86, Q86Y86, Q86YW3, Q8N2Y3	Gene names	TXLNA, TXLN
Domain Architecture	No domain graphic available
Description	Alpha-taxilin.

DMD_HUMAN
θ value	6.88961 (rank : 16)	NC score	0.008492 (rank : 19)
Query Neighborhood Hits	20	Target Neighborhood Hits	1135	Shared Neighborhood Hits	11
SwissProt Accessions	P11532, Q02295, Q14169, Q14170, Q5JYU0, Q7KZ48	Gene names	DMD
Domain Architecture
Description	Dystrophin.

MYH9_MOUSE
θ value	6.88961 (rank : 17)	NC score	0.005344 (rank : 20)
Query Neighborhood Hits	20	Target Neighborhood Hits	1829	Shared Neighborhood Hits	11
SwissProt Accessions	Q8VDD5	Gene names	Myh9
Domain Architecture	No domain graphic available
Description	Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle myosin heavy chain IIa) (NMMHC II-a) (NMMHC-IIA) (Cellular myosin heavy chain, type A) (Nonmuscle myosin heavy chain-A) (NMMHC-A).

SDCG8_HUMAN
θ value	6.88961 (rank : 18)	NC score	0.010445 (rank : 18)
Query Neighborhood Hits	20	Target Neighborhood Hits	1002	Shared Neighborhood Hits	10
SwissProt Accessions	Q86SQ7, O60527, Q3ZCR6, Q8N5F2, Q9P0F1	Gene names	SDCCAG8, CCCAP
Domain Architecture	No domain graphic available
Description	Serologically defined colon cancer antigen 8 (Centrosomal colon cancer autoantigen protein) (hCCCAP) (Antigen NY-CO-8).

APOE_HUMAN
θ value	8.99809 (rank : 19)	NC score	0.023597 (rank : 7)
Query Neighborhood Hits	20	Target Neighborhood Hits	222	Shared Neighborhood Hits	6
SwissProt Accessions	P02649, Q9P2S4	Gene names	APOE
Domain Architecture
Description	Apolipoprotein E precursor (Apo-E).

MKL2_MOUSE
θ value	8.99809 (rank : 20)	NC score	0.012114 (rank : 16)
Query Neighborhood Hits	20	Target Neighborhood Hits	269	Shared Neighborhood Hits	3
SwissProt Accessions	P59759	Gene names	Mkl2, Mrtfb
Domain Architecture
Description	MKL/myocardin-like protein 2 (Myocardin-related transcription factor B) (MRTF-B).

Hits sorted by NC score

CI090_HUMAN
NC score	0.999962 (rank : 1)	θ value	1.47893e-127 (rank : 1)
Query Neighborhood Hits	20	Target Neighborhood Hits	20	Shared Neighborhood Hits	20
SwissProt Accessions	Q69YI7, Q8WU12	Gene names	C9orf90
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C9orf90.

CI090_MOUSE
NC score	0.993766 (rank : 2)	θ value	3.90098e-120 (rank : 2)
Query Neighborhood Hits	20	Target Neighborhood Hits	14	Shared Neighborhood Hits	9
SwissProt Accessions	Q6PFD7	Gene names
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C9orf90 homolog.

TSNA1_HUMAN
NC score	0.368556 (rank : 3)	θ value	1.74796e-11 (rank : 3)
Query Neighborhood Hits	20	Target Neighborhood Hits	178	Shared Neighborhood Hits	3
SwissProt Accessions	Q96NA8	Gene names	TSNARE1
Domain Architecture	No domain graphic available
Description	t-SNARE domain-containing protein 1.

TBP_HUMAN
NC score	0.046757 (rank : 4)	θ value	2.36792 (rank : 6)
Query Neighborhood Hits	20	Target Neighborhood Hits	76	Shared Neighborhood Hits	4
SwissProt Accessions	P20226, Q16845, Q9UC02	Gene names	TBP, TF2D, TFIID
Domain Architecture
Description	TATA-box-binding protein (TATA-box factor) (TATA-binding factor) (TATA sequence-binding protein) (Transcription initiation factor TFIID TBP subunit).

REV1_MOUSE
NC score	0.043330 (rank : 5)	θ value	2.36792 (rank : 5)
Query Neighborhood Hits	20	Target Neighborhood Hits	67	Shared Neighborhood Hits	3
SwissProt Accessions	Q920Q2, Q9QXV2	Gene names	Rev1l, Rev1
Domain Architecture	No domain graphic available
Description	DNA repair protein REV1 (EC 2.7.7.-) (Rev1-like terminal deoxycytidyl transferase).

LGMN_HUMAN
NC score	0.028260 (rank : 6)	θ value	4.03905 (rank : 9)
Query Neighborhood Hits	20	Target Neighborhood Hits	23	Shared Neighborhood Hits	2
SwissProt Accessions	Q99538, O00123	Gene names	LGMN, PRSC1
Domain Architecture
Description	Legumain precursor (EC 3.4.22.34) (Asparaginyl endopeptidase) (Protease, cysteine 1).

APOE_HUMAN
NC score	0.023597 (rank : 7)	θ value	8.99809 (rank : 19)
Query Neighborhood Hits	20	Target Neighborhood Hits	222	Shared Neighborhood Hits	6
SwissProt Accessions	P02649, Q9P2S4	Gene names	APOE
Domain Architecture
Description	Apolipoprotein E precursor (Apo-E).

TXLNA_MOUSE
NC score	0.023579 (rank : 8)	θ value	2.36792 (rank : 7)
Query Neighborhood Hits	20	Target Neighborhood Hits	846	Shared Neighborhood Hits	11
SwissProt Accessions	Q6PAM1, Q6P1E5	Gene names	Txlna, Txln
Domain Architecture	No domain graphic available
Description	Alpha-taxilin.

GBP1_HUMAN
NC score	0.022858 (rank : 9)	θ value	1.81305 (rank : 4)
Query Neighborhood Hits	20	Target Neighborhood Hits	339	Shared Neighborhood Hits	9
SwissProt Accessions	P32455	Gene names	GBP1
Domain Architecture
Description	Interferon-induced guanylate-binding protein 1 (GTP-binding protein 1) (Guanine nucleotide-binding protein 1) (GBP-1) (HuGBP-1).

BRAP_MOUSE
NC score	0.021395 (rank : 10)	θ value	4.03905 (rank : 8)
Query Neighborhood Hits	20	Target Neighborhood Hits	409	Shared Neighborhood Hits	5
SwissProt Accessions	Q99MP8, Q8CC00, Q8CHX1, Q99MP7, Q9CXX8	Gene names	Brap
Domain Architecture	No domain graphic available
Description	BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes mitogenic signal propagation) (IMP).

TXLNA_HUMAN
NC score	0.020876 (rank : 11)	θ value	5.27518 (rank : 15)
Query Neighborhood Hits	20	Target Neighborhood Hits	982	Shared Neighborhood Hits	11
SwissProt Accessions	P40222, Q66K62, Q86T54, Q86T85, Q86T86, Q86Y86, Q86YW3, Q8N2Y3	Gene names	TXLNA, TXLN
Domain Architecture	No domain graphic available
Description	Alpha-taxilin.

FOXP2_MOUSE
NC score	0.020300 (rank : 12)	θ value	5.27518 (rank : 11)
Query Neighborhood Hits	20	Target Neighborhood Hits	366	Shared Neighborhood Hits	8
SwissProt Accessions	P58463, Q6PD37, Q8C4F0, Q8R441	Gene names	Foxp2
Domain Architecture
Description	Forkhead box protein P2.

FOXP2_HUMAN
NC score	0.020277 (rank : 13)	θ value	5.27518 (rank : 10)
Query Neighborhood Hits	20	Target Neighborhood Hits	366	Shared Neighborhood Hits	7
SwissProt Accessions	O15409, Q6ZND1, Q75MJ3, Q8IZE0, Q8N0W2, Q8N6B7, Q8N6B8, Q8NFQ1, Q8NFQ2, Q8NFQ3, Q8NFQ4, Q8TD74	Gene names	FOXP2, CAGH44, TNRC10
Domain Architecture
Description	Forkhead box protein P2 (CAG repeat protein 44) (Trinucleotide repeat- containing gene 10 protein).

HDAC5_MOUSE
NC score	0.018748 (rank : 14)	θ value	5.27518 (rank : 12)
Query Neighborhood Hits	20	Target Neighborhood Hits	310	Shared Neighborhood Hits	8
SwissProt Accessions	Q9Z2V6, Q9JL73	Gene names	Hdac5
Domain Architecture
Description	Histone deacetylase 5 (HD5) (Histone deacetylase mHDA1).

INCE_HUMAN
NC score	0.012433 (rank : 15)	θ value	5.27518 (rank : 13)
Query Neighborhood Hits	20	Target Neighborhood Hits	978	Shared Neighborhood Hits	9
SwissProt Accessions	Q9NQS7, Q5Y192	Gene names	INCENP
Domain Architecture
Description	Inner centromere protein.

MKL2_MOUSE
NC score	0.012114 (rank : 16)	θ value	8.99809 (rank : 20)
Query Neighborhood Hits	20	Target Neighborhood Hits	269	Shared Neighborhood Hits	3
SwissProt Accessions	P59759	Gene names	Mkl2, Mrtfb
Domain Architecture
Description	MKL/myocardin-like protein 2 (Myocardin-related transcription factor B) (MRTF-B).

MSRE_HUMAN
NC score	0.010940 (rank : 17)	θ value	5.27518 (rank : 14)
Query Neighborhood Hits	20	Target Neighborhood Hits	298	Shared Neighborhood Hits	2
SwissProt Accessions	P21757, P21759, Q45F10	Gene names	MSR1, SCARA1
Domain Architecture
Description	Macrophage scavenger receptor types I and II (Macrophage acetylated LDL receptor I and II) (Scavenger receptor class A member 1) (CD204 antigen).

SDCG8_HUMAN
NC score	0.010445 (rank : 18)	θ value	6.88961 (rank : 18)
Query Neighborhood Hits	20	Target Neighborhood Hits	1002	Shared Neighborhood Hits	10
SwissProt Accessions	Q86SQ7, O60527, Q3ZCR6, Q8N5F2, Q9P0F1	Gene names	SDCCAG8, CCCAP
Domain Architecture	No domain graphic available
Description	Serologically defined colon cancer antigen 8 (Centrosomal colon cancer autoantigen protein) (hCCCAP) (Antigen NY-CO-8).

DMD_HUMAN
NC score	0.008492 (rank : 19)	θ value	6.88961 (rank : 16)
Query Neighborhood Hits	20	Target Neighborhood Hits	1135	Shared Neighborhood Hits	11
SwissProt Accessions	P11532, Q02295, Q14169, Q14170, Q5JYU0, Q7KZ48	Gene names	DMD
Domain Architecture
Description	Dystrophin.

MYH9_MOUSE
NC score	0.005344 (rank : 20)	θ value	6.88961 (rank : 17)
Query Neighborhood Hits	20	Target Neighborhood Hits	1829	Shared Neighborhood Hits	11
SwissProt Accessions	Q8VDD5	Gene names	Myh9
Domain Architecture	No domain graphic available
Description	Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle myosin heavy chain IIa) (NMMHC II-a) (NMMHC-IIA) (Cellular myosin heavy chain, type A) (Nonmuscle myosin heavy chain-A) (NMMHC-A).